RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LLGL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131899

Ensembl transcript IDs: ENST00000316843.9, ENST00000479155.1, ENST00000621229.1, ENST00000639303.1, ENST00000639748.1, ENST00000640494.2

Found 474 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGTCCTCTTCCCTAGGCAGTGGGCCCCCAGGGCAGCCAAATGCCTaGAGGAGGGCTCAGTTCTGGCCCAGGTCCCAGGCCCACACCCTG +
Preference number: 1 (lower is better)
Translates to: LSSSLGSGPPGQPNA*RRAQFWPRSQAHTL
Trigger: CAGGGTGTGGGCCTGGGACCTGGGCCAGAACTGAGCCCTCCTGCAGGCATTTGGCTGCCCTGGGGGCCCACTGCCTAGGGAAGAGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR GCA 90 bp CCACCTGTCCTCTTCCCTAGGCAGTGGGCCCCCAGGGCAGCCAAATaGCTGCAGGAGGGCTCAGTTCTGGCCCAGGTCCCAGGCCCACAC +
Preference number: 1 (lower is better)
Translates to: PPVLFPRQWAPRAAK*LQEGSVLAQVPGPH
Trigger: GTGTGGGCCTGGGACCTGGGCCAGAACTGAGCCCTCCTGCAGGCATTTGGCTGCCCTGGGGGCCCACTGCCTAGGGAAGAGGACAGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCCCAGGCCCACACCCTaGGGCTGGTGCTGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTPRPTP*GWCCSR
Trigger: CCTGGAGCAGCACCAGCCCCAGGGTGTGGGCCTGGG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAAGGAGGGCTCAGTTCTaGCCCAGGTCCCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: MAGTQKAGLAVSRDGATARRAQF*PRSQAH
Trigger: GTGGGCCTGGGACCTGGGCCAGAACTGAGCCCTCCT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCAGGCGGGGCTTGCAGTaGGCAGAGATGGGGCCACTG +
Preference number: 2 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHARRGLQ*AEMGPL
Trigger: CAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCAGAGATGGGGCCACTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAQRWGH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGCCCCATCTCTG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCCAGAAGGCGGGGCTTaGAGTGAGCAGAGATGGGGC +
Preference number: 2 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAPEGGA*SEQRWG
Trigger: GCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGACAGCAGGTCCCAGTaGAGCCTACAGGTTAGCAGG +
Preference number: 2 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTDSRSQ*SLQVSR
Trigger: CCTGCTAACCTGTAGGCTCCACTGGGACCTGCTGTC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGGGCAGCCAAATGCCTaGAGGAGGGCTCAGTTCTGG +
Preference number: 2 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAGQPNA*RRAQFW
Trigger: CCAGAACTGAGCCCTCCTGCAGGCATTTGGCTGCCC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGACAGCAGGTCCCAGTaGAGCCTACAGGTTAGCAGG +
Preference number: 2 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHADSRSQ*SLQVSR
Trigger: CCTGCTAACCTGTAGGCTCCACTGGGACCTGCTGTC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAAAAGGAAAAATACTCTaGAAAGTGAGGGGGAAGGAT +
Preference number: 2 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAKGKIL*KVRGKD
Trigger: ATCCTTCCCCCTCACTTTGCAGAGTATTTTTCCTTT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
3UTR-3UTR CAA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCTAGAAAAATACTCTTaGCAGGGCTGGGCATGGTGG +
Preference number: 3 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHALEKYS*QGWAWW
Trigger: CCACCATGCCCAGCCCTGCAAAGAGTATTTTTCTAG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCTGCGCCAGGTCCCGTaGGGCCTCGTAGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTLRQVP*GLVGLG
Trigger: CCCGAGCCCTACGAGGCCTCACGGGACCTGGCGCAG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAAGGGCAGCGGCCCCGTaGGTGGGCTCAGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIRAAAP*VGSAAR
Trigger: ACGAGCGGCTGAGCCCACGCACGGGGCCGCTGCCCT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTAGGGCAGCGGCCCCGTaGGTGGGCTCAGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTRAAAP*VGSAAR
Trigger: ACGAGCGGCTGAGCCCACGCACGGGGCCGCTGCCCT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGCTGGCGGCAGGCACTaGACCAGGACACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTAGGRH*TRTRGW
Trigger: CCAGCCCCGTGTCCTGGTGCAGTGCCTGCCGCCAGC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACCCAGGCCCACACCCTaGGGCTGGTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIPRPTP*GWCCSR
Trigger: CCTGGAGCAGCACCAGCCCCAGGGTGTGGGCCTGGG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCCCGGTGCAGGCCTGTaGACTCCACGCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTPGAGL*TPRQVH
Trigger: GTGCACCTGGCGTGGAGTTCACAGGCCTGCACCGGG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCAGGTGTCCCTGGAGTaGCTCCACGGGGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTQVSLE*LHGAQC
Trigger: GCACTGGGCCCCGTGGAGTCACTCCAGGGACACCTG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCCTGGGGCAAGCGTCTaGCCCTCGAGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTPGASV*PSSRVR
Trigger: CCTGACCCTGCTCGAGGGGCAGACGCTTGCCCCAGG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACGCCAGCGCTCACAATaGGGGCCCACAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIRQRSQ*GPTAWR
Trigger: CCGCCAAGCTGTGGGCCCGCATTGTGAGCGCTGGCG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGCGCAGAACCTCGCCTaGGGCAAGCGTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIAQNLA*GKRLPL
Trigger: GAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTCCCGCAGGTGTCCCTaGAGTGACTCCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTSRRCP*SDSTGP
Trigger: GGGCCCCGTGGAGTCACTCCAGGGACACCTGCGGGA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTGCGGGCCCACAGCTTaGCGGGGACACTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTCGPTA*RGHWPR
Trigger: ACGTGGCCAGTGTCCCCGCCAAGCTGTGGGCCCGCA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCGCTGTGACGGCTCCTaGGCCAGGTTTCGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTRCDGS*ARFRPP
Trigger: TGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATATCGTCCTCGGCAGCCTaGGCCAGGCTGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGISSSAA*ARLSAC
Trigger: GCACGCTGACAGCCTGGCCCAGGCTGCCGAGGACGA...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTACCAGGACACGGGGCTaGAAGCCAGCAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTTRTRG*KPAGQG
Trigger: GCCCTGGCCTGCTGGCTTCCAGCCCCGTGTCCTGGT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACCCGGTGCAGGCCTGTaGACTCCACGCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAPGAGL*TPRQVH
Trigger: GTGCACCTGGCGTGGAGTTCACAGGCCTGCACCGGG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTAGGCGGGGCTTGCAGTaGGCAGAGATGGGGCCACTG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTRRGLQ*AEMGPL
Trigger: CAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATGCGGGTCGGCGCCCTaGCGCCGGAACCGAAACTTC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATACGSAP*RRNRNF
Trigger: GAAGTTTCGGTTCCGGCGGCAGGGCGCCGACCCGCA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTTGAGCTTCTCGCGCTaGGGGTCGGCGCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHALSFSR*GSAPCR
Trigger: GCGGCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCTCCACGGGGCCCAGTaGCTTCCCACAGCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTLHGAQ*LPTAVV
Trigger: GACTACCGCTGTGGGAAGGCACTGGGCCCCGTGGAG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGTGGCTACCGTGGGCTaGAGCGTTGGGAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIVATVG*SVGKLP
Trigger: CGGCAGCTTCCCAACGCTGCAGCCCACGGTAGCCAC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGCCAGCCAGGAGTCTaGAGGTCCAGCACCACCAGC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGQPGV*RSSTTS
Trigger: GCTGGTGGTGCTGGACCTGCAGACTCCTGGCTGGCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGGCTCAATGCGGCGCTaGACGGGCGTCATCTCCACG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIGSMRR*TGVIST
Trigger: CGTGGAGATGACGCCCGTGCAGCGCCGCATTGAGCC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACAGAGCGGGGCTCAATaGGGCGCTGCACGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAQSGAQ*GAARAS
Trigger: TGACGCCCGTGCAGCGCCGCATTGAGCCCCGCTCTG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACGTGGGCTGCAGCGTTaGGAAGCTGCCGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIRGLQR*EAAGIH
Trigger: GTGGATGCCGGCAGCTTCCCAACGCTGCAGCCCACG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGCCGTAAGGTGTGGTaGCTACCGTGGGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGRKVW*LPWAAA
Trigger: CGCTGCAGCCCACGGTAGCCACCACACCTTACGGCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGCTTGGCGGGGACACTaGCCACGTGGGCCGAGCAAG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAAWRGH*PRGPSK
Trigger: CTTGCTCGGCCCACGTGGCCAGTGTCCCCGCCAAGC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATGCGGGCCCACAGCTTaGCGGGGACACTGGCCACGT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATACGPTA*RGHWPR
Trigger: ACGTGGCCAGTGTCCCCGCCAAGCTGTGGGCCCGCA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTACGGTGCCGTCCTCATaGCCCGTCAGCAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTTVPSS*PVSSSP
Trigger: AGGGCTGCTGCTGACGGGCCATGAGGACGGCACCGT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGGCTCAGCCGCTCGTaGCCCTTCCATGTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGLSRS*PFHVKP
Trigger: GGGCTTCACATGGAAGGGCCACGAGCGGCTGAGCCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTGGTGCCAGCCCACATaGTGGGCCCGTGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAWCQPT*WARGGP
Trigger: GGGCCCACCACGGGCCCACCATGTGGGCTGGCACCA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCGTCCAACACGGCAATaGCCACCACAGGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTRPTRQ*PPQAPG
Trigger: ACCGGGCGCCTGTGGTGGCCATTGCCGTGTTGGACG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGAGTGCAGCCTCGGGTaGCTCCGGGGTGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAECSLG*LRGVRS
Trigger: GGACCTGACACCCCGGAGCCACCCGAGGCTGCACTC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCCCAGGCCCACACCCTaGGGCTGGTGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAPRPTP*GWCCSR
Trigger: CCTGGAGCAGCACCAGCCCCAGGGTGTGGGCCTGGG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTAGGAGGGCTCAGTTCTaGCCCAGGTCCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTRRAQF*PRSQAH
Trigger: GTGGGCCTGGGACCTGGGCCAGAACTGAGCCCTCCT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAAGGAGGGCTCAGTTCTaGCCCAGGTCCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIRRAQF*PRSQAH
Trigger: GTGGGCCTGGGACCTGGGCCAGAACTGAGCCCTCCT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAAGGCCTGGTTCCAGATaGCCAGCAGGCCCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATARPGSR*PAGPGC
Trigger: ACAGCCGGGGCCTGCTGGTCATCTGGAACCAGGCCT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGGTTTCGGCCCCCAGTaGTGGGCCAGCTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAGFGPQ*WASSRH
Trigger: GTGCCTTGAGCTGGCCCATCACTGGGGGCCGAAACC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCAGCAGCCCTCGCTGTaGCGGCTCCTGGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAQQPSL*RLLGQV
Trigger: AACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACGTGGCCCTTCCATGTaGAGCCCTCGCGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATARGPSM*SPRGPG
Trigger: TCCAGGACCGCGAGGGCTTCACATGGAAGGGCCACG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCTGCGCCAGGTCCCGTaGGGCCTCGTAGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARLRQVP*GLVGLG
Trigger: CCCGAGCCCTACGAGGCCTCACGGGACCTGGCGCAG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACGTCACCCAGGTTGGTaGGGCAGGCCAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATARHPGW*GRPGRS
Trigger: AGACCTGCCTGGCCTGCCTCACCAACCTGGGTGACG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGCACACACACACTCATaGCAGGCTGGGGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIAHTHS*QAGDWP
Trigger: GGGCCAGTCCCCAGCCTGTCATGAGTGTGTGTGTGC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACCGGACACACACACCTaGCTAGGCCCCAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIPDTHT*LGPRCG
Trigger: CCCACATCTGGGGCCTAGTCAGGTGTGTGTGTCCGG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGTGGCTGCATCCCGGTaGAGGCCTGTGAACTCCACG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIVAASR*RPVNST
Trigger: CGTGGAGTTCACAGGCCTGCACCGGGATGCAGCCAC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCTCAGTGCCCAGGGCTaGTATGTCGCTGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTLSAQG*YVAGSH
Trigger: GTGGCTGCCAGCGACATAGCAGCCCTGGGCACTGAG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGCCGAGCAAGTGATTaGAGAGGAGTGCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGRASD*RGVQRG
Trigger: GCCCCGCTGCACTCCTCTGCAATCACTTGCTCGGCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCGCCAGCGCTCACAATaGGGGCCCACAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHARQRSQ*GPTAWR
Trigger: CCGCCAAGCTGTGGGCCCGCATTGTGAGCGCTGGCG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCCCAGAACCTCACGGTaGCGTCCTCATGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTPRTSR*RPHGPS
Trigger: TGACGGGCCATGAGGACGGCACCGTGAGGTTCTGGG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACGAAGCAGCCCACCTTaGGGAAGGGTGGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIRSSPP*GRVASR
Trigger: ACGACTGGCCACCCTTCCGCAAGGTGGGCTGCTTCG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCAGAGCGGGGCTCAATaGGGCGCTGCACGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAQSGAQ*GAARAS
Trigger: TGACGCCCGTGCAGCGCCGCATTGAGCCCCGCTCTG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACTTCTCACCACCCACTaGTGCTGCCGGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGILLTTH*CCRHLQ
Trigger: CTGGAGGTGCCGGCAGCAGCAGTGGGTGGTGAGAAG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTACGGCCTCCACCGCTTaGTCAGGCCGCTTCTCACCA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTTASTA*SGRFSP
Trigger: TGGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAACCACAGGCGCCCGGTaGATCAGCTGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGITTGAR*ISCTSL
Trigger: CAAGGAGGTGCAGCTGATGCACCGGGCGCCTGTGGT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCAGAGATGGGGCCACTaGACTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTQRWGH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAGTGGCCCCATCTCTG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACCAGAAGGCGGGGCTTaGAGTGAGCAGAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIPEGGA*SEQRWG
Trigger: GCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGACAGGAGGCGGCCCTaGCCGGTCAAGAAGTGCATC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTDRRRP*PVKKCI
Trigger: GATGCACTTCTTGACCGGCCAGGGCCGCCTCCTGTC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGGGCTGCTATGTCGCTaGCAGCCACCAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIGLLCR*QPPAGP
Trigger: TGGTCCTGCTGGTGGCTGCCAGCGACATAGCAGCCC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTCCCGCAGGTGTCCCTaGAGTGACTCCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHASRRCP*SDSTGP
Trigger: GGGCCCCGTGGAGTCACTCCAGGGACACCTGCGGGA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATGGGGCAGGCACAGCTaGCCAGCCAGGAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAWGRHS*PARSLQ
Trigger: CTGCAGACTCCTGGCTGGCCAGCTGTGCCTGCCCCA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGCTTGGCGGGGACACTaGCCACGTGGGCCGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAAWRGH*PRGPSK
Trigger: CTTGCTCGGCCCACGTGGCCAGTGTCCCCGCCAAGC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTCGTCCTCGGCAGCCTaGGCCAGGCTGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHASSSAA*ARLSAC
Trigger: GCACGCTGACAGCCTGGCCCAGGCTGCCGAGGACGA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACACCTTGCGGAAGGGTaGCCAGTCGTCCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAHLAEG*PVVLGS
Trigger: GCTGCCGAGGACGACTGGCCACCCTTCCGCAAGGTG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCACCAGGACACGGGGCTaGAAGCCAGCAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHATRTRG*KPAGQG
Trigger: GCCCTGGCCTGCTGGCTTCCAGCCCCGTGTCCTGGT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGTCATCTCCACGTCGTaGGGGCAGGCCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAVISTS*GQACSA
Trigger: GGCTGAGCAGGCCTGCCCCCACGACGTGGAGATGAC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACGTCCAACACGGCAATaGCCACCACAGGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATARPTRQ*PPQAPG
Trigger: ACCGGGCGCCTGTGGTGGCCATTGCCGTGTTGGACG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCCTCGCAGGCCACACTaGCAAACGTGGCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTPRRPH*QTWPVP
Trigger: TGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGAGG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACTCGGATCCTGTAACTaGCCTGGGTGGCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGILGSCN*PGWHRG
Trigger: CCCGCGATGCCACCCAGGCCAGTTACAGGATCCGAG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGGCCAGCAGGATGCTTaGGGTCCCGTTAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIGQQDA*GPVSLA
Trigger: AGCCAGGCTAACGGGACCCCAAGCATCCTGCTGGCC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGCCAGCAGGATGCTTaGGGTCCCGTTAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGQQDA*GPVSLA
Trigger: AGCCAGGCTAACGGGACCCCAAGCATCCTGCTGGCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAACTAGGCCCCAGATGTaGGTGCCCAGCAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGITRPQM*VPSRAP
Trigger: GGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCGAAAAGCTCCTGCTTaGGCTTCTCGCGCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTRKAPA*ASRAAG
Trigger: ACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACGAAAAGCTCCTGCTTaGGCTTCTCGCGCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIRKAPA*ASRAAG
Trigger: ACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTGGTGCCGATGGCCATaGTGCGAAGTTCCGGGTCGA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTWCRWP*CEVPGR
Trigger: TCGACCCGGAACTTCGCATCATGGCCATCGGCACCA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGCTGCCATCGCTGTGTaGGCTGACCACAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIAAIAV*ADHSAA
Trigger: AGCAGCACTGTGGTCAGCTCACACAGCGATGGCAGC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACGTGGGCCGAGCAAGTaGTTGCAGAGGAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATARGPSK*LQRSAA
Trigger: CGCTGCACTCCTCTGCAATCACTTGCTCGGCCCACG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGGTTTCGGCCCCCAGTaGTGGGCCAGCTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAGFGPQ*WASSRH
Trigger: GTGCCTTGAGCTGGCCCATCACTGGGGGCCGAAACC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCGTGGCCCTTCCATGTaGAGCCCTCGCGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHARGPSM*SPRGPG
Trigger: TCCAGGACCGCGAGGGCTTCACATGGAAGGGCCACG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTAGGGAGTCATTGGGGTaGAGAGTGCACCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTRESLG*RVHLAS
Trigger: GCTGGCCAGGTGCACTCTTCACCCCAATGACTCCCT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAAGGGAGTCATTGGGGTaGAGAGTGCACCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIRESLG*RVHLAS
Trigger: GCTGGCCAGGTGCACTCTTCACCCCAATGACTCCCT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGCGAACACAGAGCCTaGGTTGGTGCCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGEHRA*VGASPH
Trigger: ATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGCTCCTCAGATGCGATaGGCACAGCGTGACCACCCT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIAPQMR*AQRDHP
Trigger: AGGGTGGTCACGCTGTGCTCATCGCATCTGAGGAGC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCGTCACCCAGGTTGGTaGGGCAGGCCAGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHARHPGW*GRPGRS
Trigger: AGACCTGCCTGGCCTGCCTCACCAACCTGGGTGACG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTAGCAGAGCGGCTCTGTaGTGTTCCGGGCACTTAGGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTSRAAL*CSGHLG
Trigger: CCCTAAGTGCCCGGAACATCACAGAGCCGCTCTGCT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACTGTGTGACAGTGGCTaGATCCCGGTGCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGILCDSG*IPVQAC
Trigger: ACAGGCCTGCACCGGGATGCAGCCACTGTCACACAG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACACTGCTGCCCTCAGTaGCCAGGGCTGCTATGTCGC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAHCCPQ*PGLLCR
Trigger: GCGACATAGCAGCCCTGGGCACTGAGGGCAGCAGTG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGCAGCGTTGGGAAGCTaGCGGCATCCACAGACCAGA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTAALGS*RHPQTR
Trigger: TCTGGTCTGTGGATGCCGGCAGCTTCCCAACGCTGC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGTGATTGCAGAGGAGTaGAGCGGGGCCAGGTATGGG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIVIAEE*SGARYG
Trigger: CCCATACCTGGCCCCGCTGCACTCCTCTGCAATCAC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCACAGGCTGGGGGCTCTaGTGCTCGCCAGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHATGWGL*CSPALT
Trigger: TGTGAGCGCTGGCGAGCAGCAGAGCCCCCAGCCTGT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGCCACGCTGACCGCCTaGTCCACCGGCACATCACTA +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAATLTA*STGTSL
Trigger: TAGTGATGTGCCGGTGGAGCAGGCGGTCAGCGTGGC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGCTGGCGGCAGGCACTaGACCAGGACACGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARAGGRH*TRTRGW
Trigger: CCAGCCCCGTGTCCTGGTGCAGTGCCTGCCGCCAGC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCCAGCACAGGGCTCTTaGGCTGGTAGTCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTPAQGS*AGSRRG
Trigger: GCCTCTTCGACTACCAGCGCAAGAGCCCTGTGCTGG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACCAGCACAGGGCTCTTaGGCTGGTAGTCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIPAQGS*AGSRRG
Trigger: GCCTCTTCGACTACCAGCGCAAGAGCCCTGTGCTGG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCATTGGGGTGAAGAGTaGACCTGGCCAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTHWGEE*TWPAQG
Trigger: GCCCTGTGCTGGCCAGGTGCACTCTTCACCCCAATG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTGCCGGCACCTCCAGTaGATAGGCGAACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTCRHLQ*IGEHRA
Trigger: GGCTCTGTGTTCGCCTATGCACTGGAGGTGCCGGCA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCTCACCACCCACTGCTaGTGCCGGCACCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHALTTHC*CRHLQC
Trigger: GCACTGGAGGTGCCGGCAGCAGCAGTGGGTGGTGAG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGCAAACGTGGCCAGTaGCACCTTGCGCACACGACA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGKRGQ*HLAHTT
Trigger: TGTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGGGTGTCAGGTCCCATaGTGTGGGCTGGATCAGGGC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAGCQVP*CGLDQG
Trigger: GCCCTGATCCAGCCCACAGCATGGGACCTGACACCC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGGCAGCCAAATGCCTaGAGGAGGGCTCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGQPNA*RRAQFW
Trigger: CCAGAACTGAGCCCTCCTGCAGGCATTTGGCTGCCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGACAGGAGGCGGCCCTaGCCGGTCAAGAAGTGCATC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATADRRRP*PVKKCI
Trigger: GATGCACTTCTTGACCGGCCAGGGCCGCCTCCTGTC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTGGGGCAGGCACAGCTaGCCAGCCAGGAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAWGRHS*PARSLQ
Trigger: CTGCAGACTCCTGGCTGGCCAGCTGTGCCTGCCCCA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCACCTTGCGGAAGGGTaGCCAGTCGTCCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAHLAEG*PVVLGS
Trigger: GCTGCCGAGGACGACTGGCCACCCTTCCGCAAGGTG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAAGAGCGGACCCTCCATaGCCAGGGAGTCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIRADPP*PGSHWG
Trigger: ACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTGGTGCCAGCCCACATaGTGGGCCCGTGGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARWCQPT*WARGGP
Trigger: GGGCCCACCACGGGCCCACCATGTGGGCTGGCACCA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGTAGGGCTCGGGCAGTaGGCGGCCACGCCCGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARVGLGQ*AATPVQ
Trigger: TTGGACGGGCGTGGCCGCCCACTGCCCGAGCCCTAC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGCACCGAGAAGACGTaGACGTCACCCAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGTEKT*TSPRLV
Trigger: CACCAACCTGGGTGACGTCCACGTCTTCTCGGTGCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAAGGATGGCACAGGCGTaGGCCTCGTCTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATARMAQA*ASSSAR
Trigger: CCTGGCAGAAGACGAGGCCCACGCCTGTGCCATCCT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTGGGCAGCTGGAAACTaGGTGCTTCTTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTWAAGN*VLLPGG
Trigger: CCCACCTGGAAGAAGCACTCAGTTTCCAGCTGCCCA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCAGGTGTCCCTGGAGTaGCTCCACGGGGCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARQVSLE*LHGAQC
Trigger: GCACTGGGCCCCGTGGAGTCACTCCAGGGACACCTG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCCCGGCTGTAGCCAATaGGAATCTTTGTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTPGCSQ*ESLWGP
Trigger: GGGACCCCACAAAGATTCTCATTGGCTACAGCCGGG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGCTGCCATCGCTGTGTaGGCTGACCACAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAAAIAV*ADHSAA
Trigger: AGCAGCACTGTGGTCAGCTCACACAGCGATGGCAGC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCGTGGGCCGAGCAAGTaGTTGCAGAGGAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHARGPSK*LQRSAA
Trigger: CGCTGCACTCCTCTGCAATCACTTGCTCGGCCCACG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCAGCAGCCCTCGCTGTaGCGGCTCCTGGGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARQQPSL*RLLGQV
Trigger: AACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAACTCGGTGTGGAGTGTaGCAGCGGTTACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGITRCGV*QRLQQL
Trigger: CAGCTGCTGTAACCGCTGTCACACTCCACACCGAGT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACATGGGCCGTCAGCTTaGACTTGGTCTTCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIHGPSA*TWSSRS
Trigger: TGAGCGCGAAGACCAAGTTCAAGCTGACGGCCCATG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAACGAAGCGATGCCGCTaGTGTCCTCCTTCCGGATGC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATATKRCR*CPPSGC
Trigger: GCATCCGGAAGGAGGACATCAGCGGCATCGCTTCGT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCCGGACACACACACCTaGCTAGGCCCCAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAPDTHT*LGPRCG
Trigger: CCCACATCTGGGGCCTAGTCAGGTGTGTGTGTCCGG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGAAACTTCATCATCTTaGGCCCGGCTGCAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIETSSS*ARLQAP
Trigger: AGGCGCCTGCAGCCGGGCGCAAGATGATGAAGTTTC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGTGGCTGCATCCCGGTaGAGGCCTGTGAACTCCACG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAVAASR*RPVNST
Trigger: CGTGGAGTTCACAGGCCTGCACCGGGATGCAGCCAC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCTCAGTGCCCAGGGCTaGTATGTCGCTGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHALSAQG*YVAGSH
Trigger: GTGGCTGCCAGCGACATAGCAGCCCTGGGCACTGAG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACCAGGAAGAAGACACTaGTGCCCTCAGTGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAPGRRH*CPQCPG
Trigger: CCCTGGGCACTGAGGGCAGCAGTGTCTTCTTCCTGG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCCTGGGGCAAGCGTCTaGCCCTCGAGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARPGASV*PSSRVR
Trigger: CCTGACCCTGCTCGAGGGGCAGACGCTTGCCCCAGG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGTGATTGCAGAGGAGTaGAGCGGGGCCAGGTATGGG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAVIAEE*SGARYG
Trigger: CCCATACCTGGCCCCGCTGCACTCCTCTGCAATCAC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGGCCGAGCAAGTGATTaGAGAGGAGTGCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAGRASD*RGVQRG
Trigger: GCCCCGCTGCACTCCTCTGCAATCACTTGCTCGGCC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGAAGAGGCCAGCTGTaGTCAGCTTATAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGRGQL*SAYRAA
Trigger: GGCCGCTCTATAAGCTGAGCACAGCTGGCCTCTTCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCGAAGCAGCCCACCTTaGGGAAGGGTGGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHARSSPP*GRVASR
Trigger: ACGACTGGCCACCCTTCCGCAAGGTGGGCTGCTTCG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACAGAGAGCAACCTTCTaGACGCCAAGCCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAQRATF*TPSRGS
Trigger: CGATCCCCGGCTTGGCGTGCAGAAGGTTGCTCTCTG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGCCACGCTGACCGCCTaGTCCACCGGCACATCACTA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAATLTA*STGTSL
Trigger: TAGTGATGTGCCGGTGGAGCAGGCGGTCAGCGTGGC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCACGACTCTTGCGAATaGGCCGGAAAGACTGGCGCA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTHDSCE*AGKTGA
Trigger: TGCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGTG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCTTCTCACCACCCACTaGTGCTGCCGGCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHALLTTH*CCRHLQ
Trigger: CTGGAGGTGCCGGCAGCAGCAGTGGGTGGTGAGAAG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATGGCCAGTGCCACCTTaGGCACACGACAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAWPVPP*AHDSPH
Trigger: ATGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGGGCAGCCAAATGCCTaGAGGAGGGCTCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAGQPNA*RRAQFW
Trigger: CCAGAACTGAGCCCTCCTGCAGGCATTTGGCTGCCC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGGGAGGTGGCACAGGTaGTGGGCCCCACCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARGRWHR*WAPPVL
Trigger: GAGGACAGGTGGGGCCCAGCACCTGTGCCACCTCCC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGCGCAGAACCTCGCCTaGGGCAAGCGTCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARAQNLA*GKRLPL
Trigger: GAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAACAGCGGTAGTCGTCTaGCACGCTGCGCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATATAVVV*HAAQNL
Trigger: GAGGTTCTGCGCAGCGTGCCAGACGACTACCGCTGT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTACACACTGCGAGGCCTaGTTCCAGATGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTTHCEA*FQMTSR
Trigger: CCTGCTGGTCATCTGGAACCAGGCCTCGCAGTGTGT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTTCCCCAGGAAGATGTaGTCCACACACTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTFPRKM*STHCEA
Trigger: GGCCTCGCAGTGTGTGGACCACATCTTCCTGGGGAA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTAGGCTCTCCAGCTGCTaGTTCCCCAGGAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTRLSSC*FPRKMW
Trigger: CCACATCTTCCTGGGGAACCAGCAGCTGGAGAGCCT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCAGGGGCCGTAAGGTGTaGTGGCTACCGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHARGRKV*WLPWAA
Trigger: TGCAGCCCACGGTAGCCACCACACCTTACGGCCCCT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGGGACACTGGCCACGTaGGCCGAGCAAGTGATTGCA +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAGTLAT*AEQVIA
Trigger: TGCAATCACTTGCTCGGCCCACGTGGCCAGTGTCCC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCGCTGTGACGGCTCCTaGGCCAGGTTTCGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARRCDGS*ARFRPP
Trigger: TGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTCCAGTACCAGCACCTaGCCTGCAGTGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHASSTST*PAVPAT
Trigger: GGTGGCTGGCACTGCAGGCCAGGTGCTGGTACTGGA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGGTGAAGAGTGCACCTaGCCAGCACAGGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAGEECT*PAQGSC
Trigger: GCAAGAGCCCTGTGCTGGCCAGGTGCACTCTTCACC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAATGGTGGGCCCGTGGTaGGCCCCATCTCGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAMVGPW*APSRRN
Trigger: ATTCCTTCGAGATGGGGCCCACCACGGGCCCACCAT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTACACAGAGCCTGAGTTaGTGCCAGCCCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTTQSLS*CQPTWW
Trigger: CCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACCACACTGGCAAACGTaGCCAGTGCCACCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAPHWQT*PVPPCA
Trigger: TGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATATCCATCAAGGCTCTGTaGGGCCAGCAGGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGISIKAL*GQQDAW
Trigger: CCAAGCATCCTGCTGGCCCCACAGAGCCTTGATGGA...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGAGTGCAGCCTCGGGTaGCTCCGGGGTGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARECSLG*LRGVRS
Trigger: GGACCTGACACCCCGGAGCCACCCGAGGCTGCACTC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACTGAGTCGATGGACATaGGTGAGAGTGCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGILSRWT*VRVQPR
Trigger: CCGAGGCTGCACTCTCACCCATGTCCATCGACTCAG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGCGTGGTGTCAGCACTaGTGGCTGAGTCGATGGACA +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIAWCQH*WLSRWT
Trigger: TGTCCATCGACTCAGCCACCAGTGCTGACACCACGC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGCGTGGTGTCAGCACTaGTGGCTGAGTCGATGGACA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTAWCQH*WLSRWT
Trigger: TGTCCATCGACTCAGCCACCAGTGCTGACACCACGC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCAGGATGGCACAGGCGTaGGCCTCGTCTTCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHARMAQA*ASSSAR
Trigger: CCTGGCAGAAGACGAGGCCCACGCCTGTGCCATCCT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAACACTCATGACAGGCTaGGGACTGGCCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGITLMTG*GLAQKQ
Trigger: CTGCTTCTGGGCCAGTCCCCAGCCTGTCATGAGTGT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGTGCACCATAGATCTTaGCAGCCCCAGACCTGGTGC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAVHHRS*QPQTWC
Trigger: GCACCAGGTCTGGGGCTGTCAAGATCTATGGTGCAC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAACTCGGTGTGGAGTGTaGCAGCGGTTACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATATRCGV*QRLQQL
Trigger: CAGCTGCTGTAACCGCTGTCACACTCCACACCGAGT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGGCGAACACAGAGCCTaGGTTGGTGCCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAGEHRA*VGASPH
Trigger: ATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGCGATGAGCACAGCGTaGCCACCCTGCATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAAMSTA*PPCMSG
Trigger: ACCTGACATGCAGGGTGGTCACGCTGTGCTCATCGC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCAGCAGAGCGGCTCTGTaGTGTTCCGGGCACTTAGGG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHASRAAL*CSGHLG
Trigger: CCCTAAGTGCCCGGAACATCACAGAGCCGCTCTGCT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACTGGCTCAGCTTGGGTaGCTCTCGGATCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGILAQLG*LSDPVT
Trigger: AGTTACAGGATCCGAGAGTCACCCAAGCTGAGCCAG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACTGGCCTTCCTCATTTaGTCAGGATGGCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGILAFLI*SGWHRR
Trigger: ACGCCTGTGCCATCCTGATCAAATGAGGAAGGCCAG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGAAACTTCATCATCTTaGGCCCGGCTGCAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAETSSS*ARLQAP
Trigger: AGGCGCCTGCAGCCGGGCGCAAGATGATGAAGTTTC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCTGTGTGACAGTGGCTaGATCCCGGTGCAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHALCDSG*IPVQAC
Trigger: ACAGGCCTGCACCGGGATGCAGCCACTGTCACACAG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCTCCACGGGGCCCAGTaGCTTCCCACAGCGGTAGTC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARLHGAQ*LPTAVV
Trigger: GACTACCGCTGTGGGAAGGCACTGGGCCCCGTGGAG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTATGTGGTCCACACACTaGGAGGCCTGGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTMWSTH*EAWFQM
Trigger: CATCTGGAACCAGGCCTCGCAGTGTGTGGACCACAT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGCAGCGTTGGGAAGCTaGCGGCATCCACAGACCAGA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAAALGS*RHPQTR
Trigger: TCTGGTCTGTGGATGCCGGCAGCTTCCCAACGCTGC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGTGGCTACCGTGGGCTaGAGCGTTGGGAAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARVATVG*SVGKLP
Trigger: CGGCAGCTTCCCAACGCTGCAGCCCACGGTAGCCAC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGGCCAGCCAGGAGTCTaGAGGTCCAGCACCACCAGC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARGQPGV*RSSTTS
Trigger: GCTGGTGGTGCTGGACCTGCAGACTCCTGGCTGGCC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGGCTGGGGGCTCTGCTaGTCGCCAGCGCTCACAATG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARGWGLC*SPALTM
Trigger: CATTGTGAGCGCTGGCGAGCAGCAGAGCCCCCAGCC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGACAGGCTGGGGGCTCTaGTGCTCGCCAGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARTGWGL*CSPALT
Trigger: TGTGAGCGCTGGCGAGCAGCAGAGCCCCCAGCCTGT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACAAAGCCATGACTGGTaGCAAAAGCCACGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIQSHDW*QKPRGS
Trigger: GGAGCCTCGTGGCTTTTGGCACCAGTCATGGCTTTG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTGCCGGCACCTCCAGTaGATAGGCGAACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHACRHLQ*IGEHRA
Trigger: GGCTCTGTGTTCGCCTATGCACTGGAGGTGCCGGCA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCACCACCCACTGCTGCTaGCGGCACCTCCAGTGCATA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHATTHCC*RHLQCI
Trigger: TATGCACTGGAGGTGCCGGCAGCAGCAGTGGGTGGT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGAACTGCTCCTCAGATaGGATGAGCACAGCGTGACC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIELLLR*DEHSVT
Trigger: GGTCACGCTGTGCTCATCGCATCTGAGGAGCAGTTC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTGGCCAGTGCCACCTTaGGCACACGACAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAWPVPP*AHDSPH
Trigger: ATGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGGCAAACGTGGCCAGTaGCACCTTGCGCACACGACA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAGKRGQ*HLAHTT
Trigger: TGTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATATGTCCTCCTTCCGGATaGAGGAATAGTGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGICPPSG*RNSAPG
Trigger: CCCAGGTGCACTATTCCTGCATCCGGAAGGAGGACA...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTGTCCTCCTTCCGGATaGAGGAATAGTGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTCPPSG*RNSAPG
Trigger: CCCAGGTGCACTATTCCTGCATCCGGAAGGAGGACA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGTGGGCCTCGTCTTCTaGCAGGTTCCTCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIVGLVF*QVPQVL
Trigger: AAGAACCTGAGGAACCTGGCAGAAGACGAGGCCCAC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATTCCCCAGGAAGATGTaGTCCACACACTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAFPRKM*STHCEA
Trigger: GGCCTCGCAGTGTGTGGACCACATCTTCCTGGGGAA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCGTGGGCTGCAGCGTTaGGAAGCTGCCGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARRGLQR*EAAGIH
Trigger: GTGGATGCCGGCAGCTTCCCAACGCTGCAGCCCACG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGGCCGTAAGGTGTGGTaGCTACCGTGGGCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARGRKVW*LPWAAA
Trigger: CGCTGCAGCCCACGGTAGCCACCACACCTTACGGCC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAAGCACAGCCAGGGCCTaGGGGTCATCAAATTCATCC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGISTARA*GSSNSS
Trigger: GGATGAATTTGATGACCCCCAGGCCCTGGCTGTGCT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGGGACACTGGCCACGTaGGCCGAGCAAGTGATTGCA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAGTLAT*AEQVIA
Trigger: TGCAATCACTTGCTCGGCCCACGTGGCCAGTGTCCC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGACGGTGCCGTCCTCATaGCCCGTCAGCAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARTVPSS*PVSSSP
Trigger: AGGGCTGCTGCTGACGGGCCATGAGGACGGCACCGT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTGCTCACAGTCTGTCTaGAAGAGGCCAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTCSQSV*KRPAVL
Trigger: GAGCACAGCTGGCCTCTTCCAGACAGACTGTGAGCA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCAAGCCCTCGCGGTCCTaGAGGAGGTCTATGATGGCC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAKPSRS*RRSMMA
Trigger: GGCCATCATAGACCTCCTCCAGGACCGCGAGGGCTT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGGGCTCAGCCGCTCGTaGCCCTTCCATGTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARGLSRS*PFHVKP
Trigger: GGGCTTCACATGGAAGGGCCACGAGCGGCTGAGCCC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTAGGCTCCACTCGGTGTaGAGTGTGACAGCGGTTACA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTRLHSV*SVTAVT
Trigger: TGTAACCGCTGTCACACTCCACACCGAGTGGAGCCT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGGTGAAGAGTGCACCTaGCCAGCACAGGGCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAGEECT*PAQGSC
Trigger: GCAAGAGCCCTGTGCTGGCCAGGTGCACTCTTCACC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGTCATCTCCACGTCGTaGGGGCAGGCCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARVISTS*GQACSA
Trigger: GGCTGAGCAGGCCTGCCCCCACGACGTGGAGATGAC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCATGGTGGGCCCGTGGTaGGCCCCATCTCGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAMVGPW*APSRRN
Trigger: ATTCCTTCGAGATGGGGCCCACCACGGGCCCACCAT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCACATGGTGGGCCCGTaGTGGGCCCCATCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARHMVGP*WAPSRR
Trigger: CCTTCGAGATGGGGCCCACCACGGGCCCACCATGTG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAACACAGAGCCTGAGTTaGTGCCAGCCCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATATQSLS*CQPTWW
Trigger: CCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTACACGACAGCCCTCATaGGCCGTCAGCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTTRQPS*AVSLNL
Trigger: CAAGTTCAAGCTGACGGCCCATGAGGGCTGTCGTGT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCCACACTGGCAAACGTaGCCAGTGCCACCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAPHWQT*PVPPCA
Trigger: TGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGGCACCGAGAAGACGTaGACGTCACCCAGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAGTEKT*TSPRLV
Trigger: CACCAACCTGGGTGACGTCCACGTCTTCTCGGTGCC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATCCATCAAGGCTCTGTaGGGCCAGCAGGATGCTTGG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATASIKAL*GQQDAW
Trigger: CCAAGCATCCTGCTGGCCCCACAGAGCCTTGATGGA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTCCCATGCTGTGGGCTaGATCAGGGCTTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTSHAVG*IRASIK
Trigger: CTTGATGGAAGCCCTGATCCAGCCCACAGCATGGGA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTGGTGTCAGCACTGGTaGCTGAGTCGATGGACATGG +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTWCQHW*LSRWTW
Trigger: CCATGTCCATCGACTCAGCCACCAGTGCTGACACCA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAAGAAGTGCATCTGTGTaGCAGTGGCTGCATCCCGGT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATARSASV*QWLHPG
Trigger: ACCGGGATGCAGCCACTGTCACACAGATGCACTTCT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGGCGCAGTGACTTCTTaGGAGACTTCACCCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAGAVTS*ETSPGR
Trigger: TCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCATGGGCCGTCAGCTTaGACTTGGTCTTCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAHGPSA*TWSSRS
Trigger: TGAGCGCGAAGACCAAGTTCAAGCTGACGGCCCATG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATCACATCTTCCACTGTaGCGTCCCCTGTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATASHLPL*RPLSCP
Trigger: TGGACACGACAGGGGACGTCACAGTGGAAGATGTGA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGCACACACACACTCATaGCAGGCTGGGGACTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARAHTHS*QAGDWP
Trigger: GGGCCAGTCCCCAGCCTGTCATGAGTGTGTGTGTGC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATATGGCCGGTCAAGAAGTaGATCTGTGTGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIWPVKK*ICVTVA
Trigger: AGCCACTGTCACACAGATGCACTTCTTGACCGGCCA...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACCCAGAGATGCAGACTaGTGTCATCAAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIPRDAD*CHQAGT
Trigger: TGTCCCTGCTTGATGACAGCAGTCTGCATCTCTGGG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACATAGGCTCTCCAGCTaGTGGTTCCCCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAHRLSS*WFPRKM
Trigger: CATCTTCCTGGGGAACCAGCAGCTGGAGAGCCTATG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATCGGGCCGTGTGCTGTaGACTGTGAAGAAGTCGATG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATASGRVL*TVKKSM
Trigger: CATCGACTTCTTCACAGTGCACAGCACACGGCCCGA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCCCAGAACCTCACGGTaGCGTCCTCATGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARPRTSR*RPHGPS
Trigger: TGACGGGCCATGAGGACGGCACCGTGAGGTTCTGGG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACAGAGACACGACTCTTaGGAATGCGCCGGAAAGACT +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIQRHDS*ECAGKT
Trigger: AGTCTTTCCGGCGCATTCGCAAGAGTCGTGTCTCTG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCAGAGCCTGAGTTGGTaGCAGCCCACATGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARQSLSW*QPTWWA
Trigger: GGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGACGGCCTCCACCGCTTaGTCAGGCCGCTTCTCACCA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARTASTA*SGRFSP
Trigger: TGGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGACCACAGGCGCCCGGTaGATCAGCTGCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARTTGAR*ISCTSL
Trigger: CAAGGAGGTGCAGCTGATGCACCGGGCGCCTGTGGT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGAACTGCTCCTCAGATaGGATGAGCACAGCGTGACC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAELLLR*DEHSVT
Trigger: GGTCACGCTGTGCTCATCGCATCTGAGGAGCAGTTC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGGGTGTCAGGTCCCATaGTGTGGGCTGGATCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARGCQVP*CGLDQG
Trigger: GCCCTGATCCAGCCCACAGCATGGGACCTGACACCC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCCAGAAGGCGGGGCTTaGAGTGAGCAGAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARPEGGA*SEQRWG
Trigger: GCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGGGCTGCTATGTCGCTaGCAGCCACCAGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARGLLCR*QPPAGP
Trigger: TGGTCCTGCTGGTGGCTGCCAGCGACATAGCAGCCC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGTGTGGTGGCTACCGTaGGCTGCAGCGTTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARVWWLP*AAALGS
Trigger: GCTTCCCAACGCTGCAGCCCACGGTAGCCACCACAC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGAGGGGCCGTAAGGTGTaGTGGCTACCGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARRGRKV*WLPWAA
Trigger: TGCAGCCCACGGTAGCCACCACACCTTACGGCCCCT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACCAGCCACCACCATCTaGGCTGTATACTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIPATTI*AVYLQR
Trigger: TCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTCCAGTACCAGCACCTaGCCTGCAGTGCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARSSTST*PAVPAT
Trigger: GGTGGCTGGCACTGCAGGCCAGGTGCTGGTACTGGA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAATGCGCCGGAAAGACTaGCGCAGTGACTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIMRRKD*RSDFLR
Trigger: TCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCAT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCCTCGCAGGCCACACTaGCAAACGTGGCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARPRRPH*QTWPVP
Trigger: TGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGAGG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCTCGGATCCTGTAACTaGCCTGGGTGGCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARLGSCN*PGWHRG
Trigger: CCCGCGATGCCACCCAGGCCAGTTACAGGATCCGAG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATGGTGGCTGAGTCGATaGACATGGGTGAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAWWLSR*TWVRVQ
Trigger: CTGCACTCTCACCCATGTCCATCGACTCAGCCACCA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCACACTCATGACAGGCTaGGGACTGGCCCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHATLMTG*GLAQKQ
Trigger: CTGCTTCTGGGCCAGTCCCCAGCCTGTCATGAGTGT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGCGATGAGCACAGCGTaGCCACCCTGCATGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARAMSTA*PPCMSG
Trigger: ACCTGACATGCAGGGTGGTCACGCTGTGCTCATCGC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGACGAAGCGATGCCGCTaGTGTCCTCCTTCCGGATGC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARTKRCR*CPPSGC
Trigger: GCATCCGGAAGGAGGACATCAGCGGCATCGCTTCGT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCTGGCTCAGCTTGGGTaGCTCTCGGATCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHALAQLG*LSDPVT
Trigger: AGTTACAGGATCCGAGAGTCACCCAAGCTGAGCCAG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCTGGCCTTCCTCATTTaGTCAGGATGGCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHALAFLI*SGWHRR
Trigger: ACGCCTGTGCCATCCTGATCAAATGAGGAAGGCCAG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCAAGGCGAAAAGCTCCTaGTTGAGCTTCTCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAKAKSS*LSFSRC
Trigger: GCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGCCTT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGAACTCCACGCCAGGTaGACCATAGATCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAELHAR*TIDLDS
Trigger: GCTGTCAAGATCTATGGTGCACCTGGCGTGGAGTTC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATGGCCGGTCAAGAAGTaGATCTGTGTGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAWPVKK*ICVTVA
Trigger: AGCCACTGTCACACAGATGCACTTCTTGACCGGCCA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCATGTGGTCCACACACTaGGAGGCCTGGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAMWSTH*EAWFQM
Trigger: CATCTGGAACCAGGCCTCGCAGTGTGTGGACCACAT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTCGGGCCGTGTGCTGTaGACTGTGAAGAAGTCGATG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHASGRVL*TVKKSM
Trigger: CATCGACTTCTTCACAGTGCACAGCACACGGCCCGA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCAGAGAGCAACCTTCTaGACGCCAAGCCGGGGATCG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARQRATF*TPSRGS
Trigger: CGATCCCCGGCTTGGCGTGCAGAAGGTTGCTCTCTG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTACCAGCACCTGGCCTaGAGTGCCAGCCACCACCAT +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARYQHLA*SASHHH
Trigger: ATGGTGGTGGCTGGCACTGCAGGCCAGGTGCTGGTA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCAAAGCCATGACTGGTaGCAAAAGCCACGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAQSHDW*QKPRGS
Trigger: GGAGCCTCGTGGCTTTTGGCACCAGTCATGGCTTTG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACAGAGACACGACTCTTaGGAATGCGCCGGAAAGACT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAQRHDS*ECAGKT
Trigger: AGTCTTTCCGGCGCATTCGCAAGAGTCGTGTCTCTG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGCTCAGCCAGCTGTaGATTGGCTTCCTGCAACTT +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATALLSQL*IGFLQL
Trigger: AAGTTGCAGGAAGCCAATGCACAGCTGGCTGAGCAG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGACCACCCACTGCTGCTaGCGGCACCTCCAGTGCATA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARTTHCC*RHLQCI
Trigger: TATGCACTGGAGGTGCCGGCAGCAGCAGTGGGTGGT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGTGAACACCTTGAACTaGTCCTCAGATGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTVNTLN*SSDAMS
Trigger: GCTCATCGCATCTGAGGAGCAGTTCAAGGTGTTCAC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGTGAACACCTTGAACTaGTCCTCAGATGCGATGAGC +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIVNTLN*SSDAMS
Trigger: GCTCATCGCATCTGAGGAGCAGTTCAAGGTGTTCAC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGACAGCGGTAGTCGTCTaGCACGCTGCGCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARTAVVV*HAAQNL
Trigger: GAGGTTCTGCGCAGCGTGCCAGACGACTACCGCTGT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACCAGCCACCACCATCTaGGCTGTATACTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAPATTI*AVYLQR
Trigger: TCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGAAGCCCTCGCGGTCCTaGAGGAGGTCTATGATGGCC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARKPSRS*RRSMMA
Trigger: GGCCATCATAGACCTCCTCCAGGACCGCGAGGGCTT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGAGAGCGGACCCTCCATaGCCAGGGAGTCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARRADPP*PGSHWG
Trigger: ACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAATGCGCCGGAAAGACTaGCGCAGTGACTTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAMRRKD*RSDFLR
Trigger: TCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCAT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCACACGACAGCCCTCATaGGCCGTCAGCTTGAACTTG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHATRQPS*AVSLNL
Trigger: CAAGTTCAAGCTGACGGCCCATGAGGGCTGTCGTGT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGGGGTCCCGTTAGCCTaGCTCAGCTTGGGTGACTCT +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARGVPLA*LSLGDS
Trigger: AGAGTCACCCAAGCTGAGCCAGGCTAACGGGACCCC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTGGTGTCAGCACTGGTaGCTGAGTCGATGGACATGG +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAWCQHW*LSRWTW
Trigger: CCATGTCCATCGACTCAGCCACCAGTGCTGACACCA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGCTCCACAGTCTTGTTaGAGGCGAAAAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAAPQSC*RRKAPA
Trigger: AGCAGGAGCTTTTCGCCTTCAACAAGACTGTGGAGC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTGGGCAGCTGGAAACTaGGTGCTTCTTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARWAAGN*VLLPGG
Trigger: CCCACCTGGAAGAAGCACTCAGTTTCCAGCTGCCCA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCCCGGCTGTAGCCAATaGGAATCTTTGTGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARPGCSQ*ESLWGP
Trigger: GGGACCCCACAAAGATTCTCATTGGCTACAGCCGGG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGAAAGACTGGCGCAGTaGCTTCTTGAGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAERLAQ*LLERLH
Trigger: GTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGAACTCCACGCCAGGTaGACCATAGATCTTGACAGC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAELHAR*TIDLDS
Trigger: GCTGTCAAGATCTATGGTGCACCTGGCGTGGAGTTC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTACAATCTCCCAGAGATaGAGACTGCTGTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTTISQR*RLLSSS
Trigger: GCTTGATGACAGCAGTCTGCATCTCTGGGAGATTGT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGGAAGAGGCCAGCTGTaGTCAGCTTATAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARGRGQL*SAYRAA
Trigger: GGCCGCTCTATAAGCTGAGCACAGCTGGCCTCTTCC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTCTGGGCTGTATACTTaGAGAGAGCAACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTSGLYT*REQPSA
Trigger: TGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCACGACTCTTGCGAATaGGCCGGAAAGACTGGCGCA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARHDSCE*AGKTGA
Trigger: TGCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGTG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGCACAGCCATTATGGTaGACAATCTCCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAAQPLW*TISQRC
Trigger: GCATCTCTGGGAGATTGTCCACCATAATGGCTGTGC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGAGGCTCTCCAGCTGCTaGTTCCCCAGGAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARRLSSC*FPRKMW
Trigger: CCACATCTTCCTGGGGAACCAGCAGCTGGAGAGCCT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTGGCCAGGGAGTCATTaGGGTGAAGAGTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARWPGSH*GEECTW
Trigger: CCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCTGAGTCGATGGACATaGGTGAGAGTGCAGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARLSRWT*VRVQPR
Trigger: CCGAGGCTGCACTCTCACCCATGTCCATCGACTCAG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGACAGCAGGTCCCAGTaGAGCCTACAGGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARDSRSQ*SLQVSR
Trigger: CCTGCTAACCTGTAGGCTCCACTGGGACCTGCTGTC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCATCGCTGTGTGAGCTaGCCACAGTGCTGCTATCAC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARHRCVS*PQCCYH
Trigger: GTGATAGCAGCACTGTGGTCAGCTCACACAGCGATG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGAAAGACTGGCGCAGTaGCTTCTTGAGAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAERLAQ*LLERLH
Trigger: GTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTCACATCTTCCACTGTaGCGTCCCCTGTCGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARSHLPL*RPLSCP
Trigger: TGGACACGACAGGGGACGTCACAGTGGAAGATGTGA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCATAGGCTCTCCAGCTaGTGGTTCCCCAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARHRLSS*WFPRKM
Trigger: CATCTTCCTGGGGAACCAGCAGCTGGAGAGCCTATG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGTGGGCCTCGTCTTCTaGCAGGTTCCTCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARVGLVF*QVPQVL
Trigger: AAGAACCTGAGGAACCTGGCAGAAGACGAGGCCCAC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTGCTCACAGTCTGTCTaGAAGAGGCCAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARCSQSV*KRPAVL
Trigger: GAGCACAGCTGGCCTCTTCCAGACAGACTGTGAGCA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGAGGCTCCACTCGGTGTaGAGTGTGACAGCGGTTACA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARRLHSV*SVTAVT
Trigger: TGTAACCGCTGTCACACTCCACACCGAGTGGAGCCT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTCCCATGCTGTGGGCTaGATCAGGGCTTCCATCAAG +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARSHAVG*IRASIK
Trigger: CTTGATGGAAGCCCTGATCCAGCCCACAGCATGGGA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGCTCCACAGTCTTGTTaGAGGCGAAAAGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARAPQSC*RRKAPA
Trigger: AGCAGGAGCTTTTCGCCTTCAACAAGACTGTGGAGC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCCCAGAGATGCAGACTaGTGTCATCAAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARPRDAD*CHQAGT
Trigger: TGTCCCTGCTTGATGACAGCAGTCTGCATCTCTGGG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTCTGGGCTGTATACTTaGAGAGAGCAACCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHASGLYT*REQPSA
Trigger: TGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR TCA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGAAGCGTTCAAATTCTaGTGGGGATATCAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: GARDPALQLRAGQVEVGIEAFKF*WGYQVK
Trigger: TTTTACCTGATATCCCCATCAGAATTTGAACGCTTC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGGCACAGCCATTATGGTaGACAATCTCCCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARAQPLW*TISQRC
Trigger: GCATCTCTGGGAGATTGTCCACCATAATGGCTGTGC...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTGGGCACAGCCATTATaGTGGACAATCTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARWAQPL*WTISQR
Trigger: TCTCTGGGAGATTGTCCACCATAATGGCTGTGCCCA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCTGAAGATGATAAAGTaGCCCCCAGATTCACAGTTC +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHALKMIK*PPDSQF
Trigger: GAACTGTGAATCTGGGGGCCACTTTATCATCTTCAG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCAAAGGAAAAATACTCTaGAAAGTGAGGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAKGKIL*KVRGKD
Trigger: ATCCTTCCCCCTCACTTTGCAGAGTATTTTTCCTTT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCTGAAGATGATAAAGTaGCCCCCAGATTCACAGTTC +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARLKMIK*PPDSQF
Trigger: GAACTGTGAATCTGGGGGCCACTTTATCATCTTCAG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR GCA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGAAAGGAAAAATACTCTaGAAAGTGAGGGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARKGKIL*KVRGKD
Trigger: ATCCTTCCCCCTCACTTTGCAGAGTATTTTTCCTTT...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS TCA 90 bp CACAGCGTGACCACCCTGCATGTCAGGTGCCTGCGCCAGGTCCCGTaGGGCCTCGTAGGGCTCGGGCAGTGGGCGGCCACGCCCGTCCAA +
Preference number: 5 (lower is better)
Translates to: HSVTTLHVRCLRQVP*GLVGLGQWAATPVQ
Trigger: TTGGACGGGCGTGGCCGCCCACTGCCCGAGCCCTACGAGGCCTCACGGGACCTGGCGCAGGCACCTGACATGCAGGGTGGTCACGCTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 90 bp CGGCCACGCCCGTCCAACACGGCAATGGCCACCACAGGCGCCCGGTaGATCAGCTGCACCTCCTTGCCCAGCACGGCCTCCACCGCTTGC +
Preference number: 5 (lower is better)
Translates to: RPRPSNTAMATTGAR*ISCTSLPSTASTAC
Trigger: GCAAGCGGTGGAGGCCGTGCTGGGCAAGGAGGTGCAGCTGATGCACCGGGCGCCTGTGGTGGCCATTGCCGTGTTGGACGGGCGTGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp CCAGCAGGCCAGGGCAGCGGCCCCGTGCGTGGGCTCAGCCGCTCGTaGCCCTTCCATGTGAAGCCCTCGCGGTCCTGGAGGAGGTCTATG +
Preference number: 5 (lower is better)
Translates to: PAGQGSGPVRGLSRS*PFHVKPSRSWRRSM
Trigger: CATAGACCTCCTCCAGGACCGCGAGGGCTTCACATGGAAGGGCCACGAGCGGCTGAGCCCACGCACGGGGCCGCTGCCCTGGCCTGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 90 bp CCTCACGGTGCCGTCCTCATGGCCCGTCAGCAGCAGCCCTCGCTGTaGCGGCTCCTGGGCCAGGTTTCGGCCCCCAGTGATGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PHGAVLMARQQQPSL*RLLGQVSAPSDGPA
Trigger: AGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTGCTGACGGGCCATGAGGACGGCACCGTGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS GCA 90 bp ACACCCGACAAGGAGTCATCGGCAGAGCGGGGCTCAATGCGGCGCTaGACGGGCGTCATCTCCACGTCGTGGGGGCAGGCCTGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TPDKESSAERGSMRR*TGVISTSWGQACSA
Trigger: GGCTGAGCAGGCCTGCCCCCACGACGTGGAGATGACGCCCGTGCAGCGCCGCATTGAGCCCCGCTCTGCCGATGACTCCTTGTCGGGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 90 bp CGGTGCATCAGCTGCACCTCCTTGCCCAGCACGGCCTCCACCGCTTaGTCAGGCCGCTTCTCACCACCCACTGCTGCTGCCGGCACCTCC +
Preference number: 5 (lower is better)
Translates to: RCISCTSLPSTASTA*SGRFSPPTAAAGTS
Trigger: GGAGGTGCCGGCAGCAGCAGTGGGTGGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGTGCTGGGCAAGGAGGTGCAGCTGATGCACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp CCGTCCTCATGGCCCGTCAGCAGCAGCCCTCGCTGTGACGGCTCCTaGGCCAGGTTTCGGCCCCCAGTGATGGGCCAGCTCAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: PSSWPVSSSPRCDGS*ARFRPPVMGQLKAL
Trigger: CAGTGCCTTGAGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTGCTGACGGGCCATGAGGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS CCA 90 bp GGGCTCAGCCGCTCGTGGCCCTTCCATGTGAAGCCCTCGCGGTCCTaGAGGAGGTCTATGATGGCCACGCTGACCGCCTGCTCCACCGGC +
Preference number: 5 (lower is better)
Translates to: GLSRSWPFHVKPSRS*RRSMMATLTACSTG
Trigger: GCCGGTGGAGCAGGCGGTCAGCGTGGCCATCATAGACCTCCTCCAGGACCGCGAGGGCTTCACATGGAAGGGCCACGAGCGGCTGAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp CGCTCGCCTGAGGAAGGCCTCCTCGGCCTCTGCCCCGCCTCACCCTaGCCATGGCGCGTAAAGACGCACGAAGCGATGCCGCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: RSPEEGLLGLCPASP*PWRVKTHEAMPLMS
Trigger: GGACATCAGCGGCATCGCTTCGTGCGTCTTTACGCGCCATGGCCAGGGTGAGGCGGGGCAGAGGCCGAGGAGGCCTTCCTCAGGCGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 90 bp AACGCACGACACCCGACAAGGAGTCATCGGCAGAGCGGGGCTCAATaGGGCGCTGCACGGGCGTCATCTCCACGTCGTGGGGGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: NARHPTRSHRQSGAQ*GAARASSPRRGGRP
Trigger: AGGCCTGCCCCCACGACGTGGAGATGACGCCCGTGCAGCGCCGCATTGAGCCCCGCTCTGCCGATGACTCCTTGTCGGGTGTCGTGCGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp GAGCGGGGCTCAATGCGGCGCTGCACGGGCGTCATCTCCACGTCGTaGGGGCAGGCCTGCTCAGCCAGCTGTGCATTGGCTTCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: ERGSMRRCTGVISTS*GQACSASCALASCN
Trigger: GTTGCAGGAAGCCAATGCACAGCTGGCTGAGCAGGCCTGCCCCCACGACGTGGAGATGACGCCCGTGCAGCGCCGCATTGAGCCCCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp ACGCACACCTACCCCGTCAGCAGCAGCCCTCGCTGTGACGGCTCCTaGGCCAGGTTTCGGCCCCCAGTGATGGGCCAGCTCAAGGCACTG +
Preference number: 5 (lower is better)
Translates to: THTYPVSSSPRCDGS*ARFRPPVMGQLKAL
Trigger: CAGTGCCTTGAGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTGCTGACGGGGTAGGTGTGCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS-3UTR CAA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACCGTGGGCTGCAGCGTaGGGAAGCTGCCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: GARDPALQLRAGQVEVGIPWAAA*GSCRHP
Trigger: TGGATGCCGGCAGCTTCCCAACGCTGCAGCCCACGG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTCCGTGGGCTGCAGCGTaGGGAAGCTGCCGGCATCCA +
Preference number: 5 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTPWAAA*GSCRHP
Trigger: TGGATGCCGGCAGCTTCCCAACGCTGCAGCCCACGG...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS TCA 90 bp CACTGCTGCTGCCGGCACCTCCAGTGCATAGGCGAACACAGAGCCTaGGTTGGTGCCAGCCCACATGGTGGGCCCGTGGTGGGCCCCATC +
Preference number: 5 (lower is better)
Translates to: HCCCRHLQCIGEHRA*VGASPHGGPVVGPI
Trigger: GATGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCTATGCACTGGAGGTGCCGGCAGCAGCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 90 bp CCACATAAGCACGCACACCTACCCCGTCAGCAGCAGCCCTCGCTGTaGCGGCTCCTGGGCCAGGTTTCGGCCCCCAGTGATGGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PHKHAHLPRQQQPSL*RLLGQVSAPSDGPA
Trigger: AGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTGCTGACGGGGTAGGTGTGCGTGCTTATGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 90 bp GCGAAAAGCTCCTGCTTGAGCTTCTCGCGCTGCGGGTCGGCGCCCTaGCGCCGGAACCGAAACTTCATCATCTTGCGCCCGGCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: AKSSCLSFSRCGSAP*RRNRNFIILRPAAG
Trigger: GCCTGCAGCCGGGCGCAAGATGATGAAGTTTCGGTTCCGGCGGCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS CCA 90 bp GCGCTCACAATGCGGGCCCACAGCTTGGCGGGGACACTGGCCACGTaGGCCGAGCAAGTGATTGCAGAGGAGTGCAGCGGGGCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: ALTMRAHSLAGTLAT*AEQVIAEECSGARY
Trigger: ATACCTGGCCCCGCTGCACTCCTCTGCAATCACTTGCTCGGCCCACGTGGCCAGTGTCCCCGCCAAGCTGTGGGCCCGCATTGTGAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp CACGAGGCTCCACTCGGTGTGGAGTGTGACAGCGGTTACAGCAGCTaGCGGCAGGCACTGCACCAGGACACGGGGCTGGAAGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HEAPLGVECDSGYSS*RQALHQDTGLEASR
Trigger: CCTGCTGGCTTCCAGCCCCGTGTCCTGGTGCAGTGCCTGCCGCCAGCTGCTGTAACCGCTGTCACACTCCACACCGAGTGGAGCCTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS-3UTR CAA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTCGAAGCAGCCCACCTaGCGGAAGGGTGGCCAGTCG +
Preference number: 5 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTSKQPT*RKGGQS
Trigger: CGACTGGCCACCCTTCCGCAAGGTGGGCTGCTTCGA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACACGGCCTCCACCGCTaGCTCAGGCCGCTTCTCACC +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAHGLHR*LRPLLT
Trigger: GGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGTG...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAATCAGCTGCACCTCCTaGCCCAGCACGGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GARDPALQLRAGQVEVGIISCTS*PSTAST
Trigger: GGTGGAGGCCGTGCTGGGCAAGGAGGTGCAGCTGAT...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGTGGCCAGTGCCACCTaGCGCACACGACAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTVASAT*RTRQPS
Trigger: TGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCAC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTGGACGTCACCCAGGTaGGTGAGGCAGGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTWTSPR*VRQARQ
Trigger: CTGCCTGGCCTGCCTCACCAACCTGGGTGACGTCCA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS GCA 90 bp CTGCCGGCACCTCCAGTGCATAGGCGAACACAGAGCCTGAGTTGGTaGCAGCCCACATGGTGGGCCCGTGGTGGGCCCCATCTCGAAGGA +
Preference number: 5 (lower is better)
Translates to: LPAPPVHRRTQSLSW*QPTWWARGGPHLEG
Trigger: TCCTTCGAGATGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCTATGCACTGGAGGTGCCGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp CTGCTGCCGGCACCTCCAGTGCATAGGCGAACACAGAGCCTGAGTTaGTGCCAGCCCACATGGTGGGCCCGTGGTGGGCCCCATCTCGAA +
Preference number: 5 (lower is better)
Translates to: LLPAPPVHRRTQSLS*CQPTWWARGGPHLE
Trigger: TTCGAGATGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCTATGCACTGGAGGTGCCGGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp CCCCTGTCGTGTCCAGCGTGGTGTCAGCACTGGTGGCTGAGTCGATaGACATGGGTGAGAGTGCAGCCTCGGGTGGCTCCGGGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: PLSCPAWCQHWWLSR*TWVRVQPRVAPGCQ
Trigger: CTGACACCCCGGAGCCACCCGAGGCTGCACTCTCACCCATGTCCATCGACTCAGCCACCAGTGCTGACACCACGCTGGACACGACAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS-3UTR CAA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACGAAACTTCATCATCTaGCGCCCGGCTGCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: GARDPALQLRAGQVEVGIRNFII*RPAAGA
Trigger: GGCGCCTGCAGCCGGGCGCAAGATGATGAAGTTTCG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGCGAAAAGCTCCTGCTaGAGCTTCTCGCGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: GARDPALQLRAGQVEVGIAKSSC*SFSRCG
Trigger: CCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAATCAGCTGCACCTCCTaGCCCAGCACGGCCTCCACC +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAISCTS*PSTAST
Trigger: GGTGGAGGCCGTGCTGGGCAAGGAGGTGCAGCTGAT...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGTGGCCAGTGCCACCTaGCGCACACGACAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAVASAT*RTRQPS
Trigger: TGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCAC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATGGACGTCACCCAGGTaGGTGAGGCAGGCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAWTSPR*VRQARQ
Trigger: CTGCCTGGCCTGCCTCACCAACCTGGGTGACGTCCA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS GCA 90 bp CCCTCGCGGTCCTGGAGGAGGTCTATGATGGCCACGCTGACCGCCTaGTCCACCGGCACATCACTAAGCTCCAGTACCAGCACCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PSRSWRRSMMATLTA*STGTSLSSSTSTWP
Trigger: AGGCCAGGTGCTGGTACTGGAGCTTAGTGATGTGCCGGTGGAGCAGGCGGTCAGCGTGGCCATCATAGACCTCCTCCAGGACCGCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS CCA 90 bp CCAGGCAGGTCTCAGCATAGTCCTCGCAGGCCACACTGGCAAACGTaGCCAGTGCCACCTTGCGCACACGACAGCCCTCATGGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: PGRSQHSPRRPHWQT*PVPPCAHDSPHGPS
Trigger: TGACGGCCCATGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGAGGACTATGCTGAGACCTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp TCGTGTCCAGCGTGGTGTCAGCACTGGTGGCTGAGTCGATGGACATaGGTGAGAGTGCAGCCTCGGGTGGCTCCGGGGTGTCAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SCPAWCQHWWLSRWT*VRVQPRVAPGCQVP
Trigger: TGGGACCTGACACCCCGGAGCCACCCGAGGCTGCACTCTCACCCATGTCCATCGACTCAGCCACCAGTGCTGACACCACGCTGGACACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGCGAAAAGCTCCTGCTaGAGCTTCTCGCGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAAKSSC*SFSRCG
Trigger: CCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTCGAAGCAGCCCACCTaGCGGAAGGGTGGCCAGTCG +
Preference number: 5 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHASKQPT*RKGGQS
Trigger: CGACTGGCCACCCTTCCGCAAGGTGGGCTGCTTCGA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS GCA 90 bp GGCCGTAAGGTGTGGTGGCTACCGTGGGCTGCAGCGTTGGGAAGCTaGCGGCATCCACAGACCAGACAGCATAGCTGCCATCGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: GRKVWWLPWAAALGS*RHPQTRQHSCHRCV
Trigger: CACACAGCGATGGCAGCTATGCTGTCTGGTCTGTGGATGCCGGCAGCTTCCCAACGCTGCAGCCCACGGTAGCCACCACACCTTACGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp GCAGTCACAGAACAGAGCATGGGGCATCCCGGGGGAGGAGCTGCATaGGGCCCAAGGCAGCCACGTAGGTGGAGGAGCAGGAAGACTACA +
Preference number: 5 (lower is better)
Translates to: AVTEQSMGHPGGGAA*GPRQPRRWRSRKTT
Trigger: TGTAGTCTTCCTGCTCCTCCACCTACGTGGCTGCCTTGGGCCCCATGCAGCTCCTCCCCCGGGATGCCCCATGCTCTGTTCTGTGACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CCA 90 bp GGGACACCCAGCCCTACCTGGCCTGCAGTGCCAGCCACCACCATCTaGGCTGTATACTTGCAGAGAGCAACCTTCTGCACGCCAAGCCGG +
Preference number: 5 (lower is better)
Translates to: GTPSPTWPAVPATTI*AVYLQRATFCTPSR
Trigger: CCGGCTTGGCGTGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAGGCCAGGTAGGGCTGGGTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS-3UTR CAA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCACGGCCTCCACCGCTaGCTCAGGCCGCTTCTCACC +
Preference number: 5 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARHGLHR*LRPLLT
Trigger: GGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGTG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGCCGTCAGCTTGAACTaGGTCTTCGCGCTCACCTTG +
Preference number: 5 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTAVSLN*VFALTL
Trigger: CAAGGTGAGCGCGAAGACCAAGTTCAAGCTGACGGC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS TCA 90 bp GTAGCCAATGAGAATCTTTGTGGGGTCCCGCAGGTGTCCCTGGAGTaGCTCCACGGGGCCCAGTGCCTTCCCACAGCGGTAGTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: VANENLCGVPQVSLE*LHGAQCLPTAVVVW
Trigger: CCAGACGACTACCGCTGTGGGAAGGCACTGGGCCCCGTGGAGTCACTCCAGGGACACCTGCGGGACCCCACAAAGATTCTCATTGGCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 90 bp GGGCTCAGGGGTCTGGGCCCAGTACAGGAGCCTTGTGTGGCACAGTaGGATAGGACTAGATTCCTGCCCTCCCAGGGGAACTCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GLRGLGPVQEPCVAQ*DRTRFLPSQGNSAG
Trigger: GCCTGCTGAGTTCCCCTGGGAGGGCAGGAATCTAGTCCTATCTCACTGTGCCACACAAGGCTCCTGTACTGGGCCCAGACCCCTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 90 bp TTCACCCGGGAGAGCGGACCCTCCATGGCCAGGGAGTCATTGGGGTaGAGAGTGCACCTGGGGAAGACAGGGTCCAGTAGGCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: FTRESGPSMARESLG*RVHLGKTGSSRPKP
Trigger: TGGCTTTGGCCTACTGGACCCTGTCTTCCCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCTCCCGGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621229.1
ENST00000639303.1
CDS GCA 90 bp GGTCTCAGCATAGTCCTCGCAGGCCACACTGGCAAACGTGGCCAGTaGCACCTTGCGCACACGACAGCCCTCATGGGCCGTCAGCTTGAA +
Preference number: 5 (lower is better)
Translates to: GLSIVLAGHTGKRGQ*HLAHTTALMGRQLE
Trigger: TTCAAGCTGACGGCCCATGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGAGGACTATGCTGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 90 bp GGGAGAGCGGACCCTCCATGGCCAGGGAGTCATTGGGGTGAAGAGTaGACCTGGGGAAGACAGGGTCCAGTAGGCCAAAGCCATGACTGG +
Preference number: 5 (lower is better)
Translates to: GRADPPWPGSHWGEE*TWGRQGPVGQSHDW
Trigger: CCAGTCATGGCTTTGGCCTACTGGACCCTGTCTTCCCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621229.1
ENST00000639303.1
CDS CCA 90 bp AGGTCCCATGCTGTGGGCTGGATCAGGGCTTCCATCAAGGCTCTGTaGGGCCAGCAGGATGCTTGGGGTCCCGTTAGCCTGGCTCAGCTT +
Preference number: 5 (lower is better)
Translates to: RSHAVGWIRASIKAL*GQQDAWGPVSLAQL
Trigger: AAGCTGAGCCAGGCTAACGGGACCCCAAGCATCCTGCTGGCCCCACAGAGCCTTGATGGAAGCCCTGATCCAGCCCACAGCATGGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 90 bp GAGACTTCACCCGGGAGAGCGGACCCTCCATGGCCAGGGAGTCATTaGGGTGAAGAGTGCACCTGGGGAAGACAGGGTCCAGTAGGCCAA +
Preference number: 5 (lower is better)
Translates to: ETSPGRADPPWPGSH*GEECTWGRQGPVGQ
Trigger: TTGGCCTACTGGACCCTGTCTTCCCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCTCCCGGGTGAAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621229.1
ENST00000639303.1
CDS-3UTR CAA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATATTGGCTTCCTGCAACTaGCTGCTGGCATTAGCAGCC +
Preference number: 5 (lower is better)
Translates to: GARDPALQLRAGQVEVGILASCN*LLALAA
Trigger: GGCTGCTAATGCCAGCAGCAAGTTGCAGGAAGCCAA...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTGGCAGTGTGAACACCTaGAACTGCTCCTCAGATGCG +
Preference number: 5 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTGSVNT*NCSSDA
Trigger: CGCATCTGAGGAGCAGTTCAAGGTGTTCACACTGCC...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATAGGCAGTGTGAACACCTaGAACTGCTCCTCAGATGCG +
Preference number: 5 (lower is better)
Translates to: GARDPALQLRAGQVEVGIGSVNT*NCSSDA
Trigger: CGCATCTGAGGAGCAGTTCAAGGTGTTCACACTGCC...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGTCTTCGCGCTCACCTaGGGCAGTGTGAACACCTTG +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAVFALT*GSVNTL
Trigger: CAAGGTGTTCACACTGCCCAAGGTGAGCGCGAAGAC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCAGCCGTCAGCTTGAACTaGGTCTTCGCGCTCACCTTG +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAAVSLN*VFALTL
Trigger: CAAGGTGAGCGCGAAGACCAAGTTCAAGCTGACGGC...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATCATGGGCCGTCAGCTaGAACTTGGTCTTCGCGCTC +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATASWAVS*NLVFAL
Trigger: GAGCGCGAAGACCAAGTTCAAGCTGACGGCCCATGA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTCTGGCCTTCCTCATTaGATCAGGATGGCACAGGCG +
Preference number: 5 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTSGLPH*IRMAQA
Trigger: CGCCTGTGCCATCCTGATCAAATGAGGAAGGCCAGA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS TCA 90 bp CACGACTCTTGCGAATGCGCCGGAAAGACTGGCGCAGTGACTTCTTaGGAGACTTCACCCGGGAGAGCGGACCCTCCATGGCCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: HDSCECAGKTGAVTS*ETSPGRADPPWPGS
Trigger: ACTCCCTGGCCATGGAGGGTCCGCTCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 90 bp GCCAGAGACACGACTCTTGCGAATGCGCCGGAAAGACTGGCGCAGTaGCTTCTTGAGAGACTTCACCCGGGAGAGCGGACCCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: ARDTTLANAPERLAQ*LLERLHPGERTLHG
Trigger: GCCATGGAGGGTCCGCTCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGTGTCTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 90 bp GCACCTGGCCTGCAGTGCCAGCCACCACCATCTGGGCTGTATACTTaGAGAGAGCAACCTTCTGCACGCCAAGCCGGGGATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: APGLQCQPPPSGLYT*REQPSARQAGDRHC
Trigger: ACAGTGACGATCCCCGGCTTGGCGTGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAGGCCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS CCA 90 bp AGCTCCAGTACCAGCACCTGGCCTGCAGTGCCAGCCACCACCATCTaGGCTGTATACTTGCAGAGAGCAACCTTCTGCACGCCAAGCCGG +
Preference number: 5 (lower is better)
Translates to: SSSTSTWPAVPATTI*AVYLQRATFCTPSR
Trigger: CCGGCTTGGCGTGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAGGCCAGGTGCTGGTACTGGAGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS-3UTR CAA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCGAAACTTCATCATCTaGCGCCCGGCTGCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARRNFII*RPAAGA
Trigger: GGCGCCTGCAGCCGGGCGCAAGATGATGAAGTTTCG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTTGCTCCACAGTCTTGTaGAAGGCGAAAAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTCSTVL*KAKSSC
Trigger: GCAGGAGCTTTTCGCCTTCAACAAGACTGTGGAGCA...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp GGTGCCAGGGATCCAGCACTCCAGCTCCGAGCAGGGCAGGTGGAGGTCGGGATACCATGCTCCACAGTCTaGTTGAAGGCGAAAAGCTCC +
Preference number: 5 (lower is better)
Translates to: GARDPALQLRAGQVEVGIPCSTV*LKAKSS
Trigger: GGAGCTTTTCGCCTTCAACAAGACTGTGGAGCATGG...TATCCCGACCTCCACCTGCCCTGCTCGGAGCTGGAGTGCTGGATCCCTGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCCCAGAGACACGACTCTaGCGAATGCGCCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAPETRL*RMRRKD
Trigger: GTCTTTCCGGCGCATTCGCAAGAGTCGTGTCTCTGG...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATTAGCAGCCCGCTTCTaGCCAGAGACACGACTCTTG +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATALAARF*PETRLL
Trigger: CAAGAGTCGTGTCTCTGGCAAGAAGCGGGCTGCTAA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCGTCTTCGCGCTCACCTaGGGCAGTGTGAACACCTTG +
Preference number: 5 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAVFALT*GSVNTL
Trigger: CAAGGTGTTCACACTGCCCAAGGTGAGCGCGAAGAC...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTCATGGGCCGTCAGCTaGAACTTGGTCTTCGCGCTC +
Preference number: 5 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHASWAVS*NLVFAL
Trigger: GAGCGCGAAGACCAAGTTCAAGCTGACGGCCCATGA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS GCA 90 bp TCTTCCAGGTGGGCACAGCCATTATGGTGGACAATCTCCCAGAGATaGAGACTGCTGTCATCAAGCAGGGACAGGAGGCGGCCCTGGCCG +
Preference number: 5 (lower is better)
Translates to: SSRWAQPLWWTISQR*RLLSSSRDRRRPWP
Trigger: CGGCCAGGGCCGCCTCCTGTCCCTGCTTGATGACAGCAGTCTGCATCTCTGGGAGATTGTCCACCATAATGGCTGTGCCCACCTGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS GCA 90 bp CTACCTGGCCTGCAGTGCCAGCCACCACCATCTGGGCTGTATACTTaGAGAGAGCAACCTTCTGCACGCCAAGCCGGGGATCGTCACTGT +
Preference number: 5 (lower is better)
Translates to: LPGLQCQPPPSGLYT*REQPSARQAGDRHC
Trigger: ACAGTGACGATCCCCGGCTTGGCGTGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAGGCCAGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS-3UTR CAA 90 bp GGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCACTATCTGGGCTGTATACTaGCAGAGAGCAACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GGNPEGGACSEQRWGHCTIWAVY*QRATFC
Trigger: GCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGAT...AGTGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCTCAGCCAGCTGTGCATaGGCTTCCTGCAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHASASCA*ASCNLL
Trigger: CAGCAAGTTGCAGGAAGCCAATGCACAGCTGGCTGA...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS TCA 90 bp AGCACCTCCTGTATGTCATGTGAGTGCCGGAGCACAGCACTGACATaGGTTCCCTCCTCTCAACACTGTGGTTCCCCCAGCGACAGGCCC +
Preference number: 5 (lower is better)
Translates to: STSCMSCECRSTALT*VPSSQHCGSPSDRP
Trigger: GGGCCTGTCGCTGGGGGAACCACAGTGTTGAGAGGAGGGAACTCATGTCAGTGCTGTGCTCCGGCACTCACATGACATACAGGAGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 90 bp ACAGTCTTGTTGAAGGCGAAAAGCTCCTGCTTGAGCTTCTCGCGCTaGGGGTCGGCGCCCTGCCGCCGGAACCGAAACTTCATCATCTTG +
Preference number: 5 (lower is better)
Translates to: TVLLKAKSSCLSFSR*GSAPCRRNRNFIIL
Trigger: CAAGATGATGAAGTTTCGGTTCCGGCGGCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGCCTTCAACAAGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS GCA 90 bp ACTGGCACCATCAAAGCCGGGCCGGCTGGGCAGCTGGAAACTGAGTaGTTCTTCCAGGTGGGCACAGCCATTATGGTGGACAATCTCCCA +
Preference number: 5 (lower is better)
Translates to: TGTIKAGPAGQLETE*FFQVGTAIMVDNLP
Trigger: TGGGAGATTGTCCACCATAATGGCTGTGCCCACCTGGAAGAAGCACTCAGTTTCCAGCTGCCCAGCCGGCCCGGCTTTGATGGTGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS GCA 90 bp CAGTACAGGAGCCTTGTGTGGCACAGTGAGATAGGACTAGATTCCTaGCCTCCCAGGGGAACTCAGCAGGCTGAGGGGGCATCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: QYRSLVWHSEIGLDS*PPRGTQQAEGASGF
Trigger: GAACCCTGATGCCCCCTCAGCCTGCTGAGTTCCCCTGGGAGGGCAGGAATCTAGTCCTATCTCACTGTGCCACACAAGGCTCCTGTACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 90 bp AGCCCAGCTGCATGCTACGTGGCCTCCCGTGCCTGTACACCTGGCTaGCCCACTAAACTCCAGACTTCACACTGTACTCCAGAAACCTCC +
Preference number: 5 (lower is better)
Translates to: SPAACYVASRACTPG*PTKLQTSHCTPETS
Trigger: GGAGGTTTCTGGAGTACAGTGTGAAGTCTGGAGTTTAGTGGGGCAGCCAGGTGTACAGGCACGGGAGGCCACGTAGCATGCAGCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS-3UTR CAA 90 bp ATGGCGGGAACCCAGAAGGCGGGGCTTGCAGTGAGCAGAGATGGGGCCACTGCATTCCGCCACAGAATCTaGTTAATGGCCTTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: MAGTQKAGLAVSRDGATAFRHRI*LMALQG
Trigger: TCCCTGCAAGGCCATTAACAAGATTCTGTGGCGGAA...TGCAGTGGCCCCATCTCTGCTCACTGCAAGCCCCGCCTTCTGGGTTCCCGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTGGCGCAGTGACTTCTaGAGAGACTTCACCCGGGAG +
Preference number: 5 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARWRSDF*RDFTRE
Trigger: CTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCCAGAGACACGACTCTaGCGAATGCGCCGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARPETRL*RMRRKD
Trigger: GTCTTTCCGGCGCATTCGCAAGAGTCGTGTCTCTGG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp CTGACTAGGCCCCAGATGTGGGTGCCCAGCAGAGCTCCCAGTCACATCCATGCCATCTGGGCTGTATACTaGCAGAGAGCAACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LTRPQMWVPSRAPSHIHAIWAVY*QRATFC
Trigger: GCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGAT...GGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCTGGGGCCTAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTTAGCAGCCCGCTTCTaGCCAGAGACACGACTCTTG +
Preference number: 5 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARLAARF*PETRLL
Trigger: CAAGAGTCGTGTCTCTGGCAAGAAGCGGGCTGCTAA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTCTGGCCTTCCTCATTaGATCAGGATGGCACAGGCG +
Preference number: 5 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARSGLPH*IRMAQA
Trigger: CGCCTGTGCCATCCTGATCAAATGAGGAAGGCCAGA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS TCA 90 bp AGAGGACTTTGGGGGTTCTGCCTGCACTGGAGCAGCCATCAGAGGTaGTCAAGAGTAAGGCAGTCACAGAACAGAGCATGGGGCATCCCG +
Preference number: 5 (lower is better)
Translates to: RGLWGFCLHWSSHQR*SRVRQSQNRAWGIP
Trigger: CGGGATGCCCCATGCTCTGTTCTGTGACTGCCTTACTCTTGATCACCTCTGATGGCTGCTCCAGTGCAGGCAGAACCCCCAAAGTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CCA 90 bp CGGGATAGTTCTGGCCTTCCTCATTTGATCAGGATGGCACAGGCGTaGGCCTCGTCTTCTGCCAGGTTCCTCAGGTTCTTCTCTGACTCC +
Preference number: 5 (lower is better)
Translates to: RDSSGLPHLIRMAQA*ASSSARFLRFFSDS
Trigger: GGAGTCAGAGAAGAACCTGAGGAACCTGGCAGAAGACGAGGCCCACGCCTGTGCCATCCTGATCAAATGAGGAAGGCCAGAACTATCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000639748.1
ENST00000640494.2
CDS-3UTR CAA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGTTCCGCCACAGAATCTaGTTAATGGCCTTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARFRHRI*LMALQG
Trigger: TCCCTGCAAGGCCATTAACAAGATTCTGTGGCGGAA...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS-3UTR CAA 90 bp AGCCTACAGGTTAGCAGGCGTGGTTCTATGTTAAGGGGCCAGGCAGGTGCCAGGCTAGAAAAATACTCTTaGCAGGGCTGGGCATGGTGG +
Preference number: 5 (lower is better)
Translates to: SLQVSRRGSMLRGQAGARLEKYS*QGWAWW
Trigger: CCACCATGCCCAGCCCTGCAAAGAGTATTTTTCTAG...CCTGGCACCTGCCTGGCCCCTTAACATAGAACCACGCCTGCTAACCTGTAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS TCA 90 bp GGTAGAGCTCAGTTCCAGGCCAAAAGGCAGATCAGGGCAGCACCTTaGACCAAGGTCCAGGGAGGTTTCATTCCAAACCACCTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: GRAQFQAKRQIRAAP*TKVQGGFIPNHLGQ
Trigger: TTGCCCAAGGTGGTTTGGAATGAAACCTCCCTGGACCTTGGTTCAAGGTGCTGCCCTGATCTGCCTTTTGGCCTGGAACTGAGCTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 90 bp CACAAGGAACACAGTGGTGACCAAGACACACTAGTCCCTGCCCTCTaGGGGCAAAGTGTCCACCCTTACCCTGAGCCTCTATCTCCCATT +
Preference number: 5 (lower is better)
Translates to: HKEHSGDQDTLVPAL*GQSVHPYPEPLSPI
Trigger: AATGGGAGATAGAGGCTCAGGGTAAGGGTGGACACTTTGCCCTCAGAGGGCAGGGACTAGTGTGTCTTGGTCACCACTGTGTTCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 90 bp CTTCACACTGTACTCCAGAAACCTCCCAGGCCCTCTCTCGATCTGTaGCAAAATCAATCACAGAGTTATGCCAAGGTTATGCAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: LHTVLQKPPRPSLDL*QNQSQSYAKVMQLV
Trigger: TACCAGCTGCATAACCTTGGCATAACTCTGTGATTGATTTTGTCACAGATCGAGAGAGGGCCTGGGAGGTTTCTGGAGTACAGTGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 90 bp TCTAGGACTGTCTTCAGTTCATCAGCTAAACAAGCACTCACTGAATaGCTACTGTATACCAAGGCCCTGGCTGAGCACAAGGAACACAGT +
Preference number: 5 (lower is better)
Translates to: SRTVFSSSAKQALTE*LLYTKALAEHKEHS
Trigger: ACTGTGTTCCTTGTGCTCAGCCAGGGCCTTGGTATACAGTAGGCATTCAGTGAGTGCTTGTTTAGCTGATGAACTGAAGACAGTCCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 90 bp TCCCAGGCCCTCTCTCGATCTGTGACAAAATCAATCACAGAGTTATaGCAAGGTTATGCAGCTGGTATCCCCATCAAACCTCGAGTTCTT +
Preference number: 5 (lower is better)
Translates to: SQALSRSVTKSITEL*QGYAAGIPIKPRVL
Trigger: AAGAACTCGAGGTTTGATGGGGATACCAGCTGCATAACCTTGGCATAACTCTGTGATTGATTTTGTCACAGATCGAGAGAGGGCCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 90 bp CTCTCGATCTGTGACAAAATCAATCACAGAGTTATGCCAAGGTTATaGAGCTGGTATCCCCATCAAACCTCGAGTTCTTTCGAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LSICDKINHRVMPRL*SWYPHQTSSSFEAE
Trigger: CTCTGCCTCGAAAGAACTCGAGGTTTGATGGGGATACCAGCTGCATAACCTTGGCATAACTCTGTGATTGATTTTGTCACAGATCGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 72 bp CGGCGCCCTGCCGCCGGAACCGAAACTTCATCATCTTaGGCCCGGCTGCAGGCGCCTCGCCCGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: RRPAAGTETSSS*ARLQAPRPPPP
Trigger: CGGCGGCGGCGGGCGAGGCGCCTGCAGCCGGGCGCAAGATGATGAAGTTTCGGTTCCGGCGGCAGGGCGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS GCA 72 bp CCGCCGGAACCGAAACTTCATCATCTTGCGCCCGGCTaGAGGCGCCTCGCCCGCCGCCGCCGCCCGCAGGAT +
Preference number: 6 (lower is better)
Translates to: PPEPKLHHLAPG*RRLARRRRPQD
Trigger: ATCCTGCGGGCGGCGGCGGCGGGCGAGGCGCCTGCAGCCGGGCGCAAGATGATGAAGTTTCGGTTCCGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS CCA 72 bp CAGGGCAGCGGCCCCGTGCGTGGGCTCAGCCGCTCGTaGCCCTTCCATGTGAAGCCCTCGCGGTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: QGSGPVRGLSRS*PFHVKPSRSWR
Trigger: CCTCCAGGACCGCGAGGGCTTCACATGGAAGGGCCACGAGCGGCTGAGCCCACGCACGGGGCCGCTGCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp TGGCCCGTCAGCAGCAGCCCTCGCTGTGACGGCTCCTaGGCCAGGTTTCGGCCCCCAGTGATGGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: WPVSSSPRCDGS*ARFRPPVMGQL
Trigger: GAGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTGCTGACGGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS CAA 90 bp CCGGTGCATCAGCTGCACCTCCTTGCCCAGCACGGCCTCCACCGCTaGCTCAGGCCGCTTCTCACCACCCACTGCTGCTGCCGGCACCTC +
Preference number: 6 (lower is better)
Translates to: PVHQLHLLAQHGLHR*LRPLLTTHCCCRHL
Trigger: GAGGTGCCGGCAGCAGCAGTGGGTGGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGTGCTGGGCAAGGAGGTGCAGCTGATGCACCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp AAGGAGTCATCGGCAGAGCGGGGCTCAATGCGGCGCTaGACGGGCGTCATCTCCACGTCGTGGGGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: KESSAERGSMRR*TGVISTSWGQA
Trigger: GGCCTGCCCCCACGACGTGGAGATGACGCCCGTGCAGCGCCGCATTGAGCCCCGCTCTGCCGATGACTCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp CCGTCCAACACGGCAATGGCCACCACAGGCGCCCGGTaGATCAGCTGCACCTCCTTGCCCAGCACGGCCTCC +
Preference number: 6 (lower is better)
Translates to: PSNTAMATTGAR*ISCTSLPSTAS
Trigger: GGAGGCCGTGCTGGGCAAGGAGGTGCAGCTGATGCACCGGGCGCCTGTGGTGGCCATTGCCGTGTTGGACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp GCGGTAGTCGTCTGGCACGCTGCGCAGAACCTCGCCTaGGGCAAGCGTCTGCCCCTCGAGCAGGGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: AVVVWHAAQNLA*GKRLPLEQGQG
Trigger: ACCCTGACCCTGCTCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGCAGCGTGCCAGACGACTACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS CCA 72 bp TACCCCGTCAGCAGCAGCCCTCGCTGTGACGGCTCCTaGGCCAGGTTTCGGCCCCCAGTGATGGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: YPVSSSPRCDGS*ARFRPPVMGQL
Trigger: GAGCTGGCCCATCACTGGGGGCCGAAACCTGGCCCAGGAGCCGTCACAGCGAGGGCTGCTGCTGACGGGGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CCA 72 bp CCGCCAGGCCCACGCTGGGCTCTCTGGCACCTTCCCTaGGCAGCTCAGCGTGGGCCAGCCCAGATTTTCCAG +
Preference number: 6 (lower is better)
Translates to: PPGPRWALWHLP*AAQRGPAQIFQ
Trigger: CTGGAAAATCTGGGCTGGCCCACGCTGAGCTGCCCAGGGAAGGTGCCAGAGAGCCCAGCGTGGGCCTGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CCA 72 bp GAGGAAGGCCTCCTCGGCCTCTGCCCCGCCTCACCCTaGCCATGGCGCGTAAAGACGCACGAAGCGATGCCG +
Preference number: 6 (lower is better)
Translates to: EEGLLGLCPASP*PWRVKTHEAMP
Trigger: CGGCATCGCTTCGTGCGTCTTTACGCGCCATGGCCAGGGTGAGGCGGGGCAGAGGCCGAGGAGGCCTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CAA 90 bp TGGGGGCTCTGCTGCTCGCCAGCGCTCACAATGCGGGCCCACAGCTaGGCGGGGACACTGGCCACGTGGGCCGAGCAAGTGATTGCAGAG +
Preference number: 6 (lower is better)
Translates to: WGLCCSPALTMRAHS*AGTLATWAEQVIAE
Trigger: CTCTGCAATCACTTGCTCGGCCCACGTGGCCAGTGTCCCCGCCAAGCTGTGGGCCCGCATTGTGAGCGCTGGCGAGCAGCAGAGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 72 bp GCTTGGCGGGGACACTGGCCACGTGGGCCGAGCAAGTaGTTGCAGAGGAGTGCAGCGGGGCCAGGTATGGGG +
Preference number: 6 (lower is better)
Translates to: AWRGHWPRGPSK*LQRSAAGPGMG
Trigger: CCCCATACCTGGCCCCGCTGCACTCCTCTGCAATCACTTGCTCGGCCCACGTGGCCAGTGTCCCCGCCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp GGCACGCTGCGCAGAACCTCGCCTGGGGCAAGCGTCTaGCCCTCGAGCAGGGTCAGGGTGGTAACATCCAGG +
Preference number: 6 (lower is better)
Translates to: GTLRRTSPGASV*PSSRVRVVTSR
Trigger: CCTGGATGTTACCACCCTGACCCTGCTCGAGGGGCAGACGCTTGCCCCAGGCGAGGTTCTGCGCAGCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS GCA 72 bp CACCCGACAAGGAGTCATCGGCAGAGCGGGGCTCAATaGGGCGCTGCACGGGCGTCATCTCCACGTCGTGGG +
Preference number: 6 (lower is better)
Translates to: HPTRSHRQSGAQ*GAARASSPRRG
Trigger: CCCACGACGTGGAGATGACGCCCGTGCAGCGCCGCATTGAGCCCCGCTCTGCCGATGACTCCTTGTCGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp AGCTGCACCTCCTTGCCCAGCACGGCCTCCACCGCTTaGTCAGGCCGCTTCTCACCACCCACTGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SCTSLPSTASTA*SGRFSPPTAAA
Trigger: GGCAGCAGCAGTGGGTGGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGTGCTGGGCAAGGAGGTGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp ATGCGGGCCCACAGCTTGGCGGGGACACTGGCCACGTaGGCCGAGCAAGTGATTGCAGAGGAGTGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: MRAHSLAGTLAT*AEQVIAEECSG
Trigger: CCCGCTGCACTCCTCTGCAATCACTTGCTCGGCCCACGTGGCCAGTGTCCCCGCCAAGCTGTGGGCCCGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp GAACAGAGCATGGGGCATCCCGGGGGAGGAGCTGCATaGGGCCCAAGGCAGCCACGTAGGTGGAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: EQSMGHPGGGAA*GPRQPRRWRSR
Trigger: CCTGCTCCTCCACCTACGTGGCTGCCTTGGGCCCCATGCAGCTCCTCCCCCGGGATGCCCCATGCTCTGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CAA 72 bp CAGCTGCACCTCCTTGCCCAGCACGGCCTCCACCGCTaGCTCAGGCCGCTTCTCACCACCCACTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: QLHLLAQHGLHR*LRPLLTTHCCC
Trigger: GCAGCAGCAGTGGGTGGTGAGAAGCGGCCTGAGCAAGCGGTGGAGGCCGTGCTGGGCAAGGAGGTGCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp TCCTGCTTGAGCTTCTCGCGCTGCGGGTCGGCGCCCTaGCGCCGGAACCGAAACTTCATCATCTTGCGCCCG +
Preference number: 6 (lower is better)
Translates to: SCLSFSRCGSAP*RRNRNFIILRP
Trigger: CGGGCGCAAGATGATGAAGTTTCGGTTCCGGCGGCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAAGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316843.9
ENST00000640494.2
CDS CCA 72 bp CGCTCGTGGCCCTTCCATGTGAAGCCCTCGCGGTCCTaGAGGAGGTCTATGATGGCCACGCTGACCGCCTGC +
Preference number: 6 (lower is better)
Translates to: RSWPFHVKPSRS*RRSMMATLTAC
Trigger: GCAGGCGGTCAGCGTGGCCATCATAGACCTCCTCCAGGACCGCGAGGGCTTCACATGGAAGGGCCACGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp CCCGGGAGAGCGGACCCTCCATGGCCAGGGAGTCATTaGGGTGAAGAGTGCACCTGGCCAGCACAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: PGRADPPWPGSH*GEECTWPAQGS
Trigger: AGAGCCCTGTGCTGGCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCTCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp TCAATGCGGCGCTGCACGGGCGTCATCTCCACGTCGTaGGGGCAGGCCTGCTCAGCCAGCTGTGCATTGGCT +
Preference number: 6 (lower is better)
Translates to: SMRRCTGVISTS*GQACSASCALA
Trigger: AGCCAATGCACAGCTGGCTGAGCAGGCCTGCCCCCACGACGTGGAGATGACGCCCGTGCAGCGCCGCATTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp GCACCTCCAGTGCATAGGCGAACACAGAGCCTGAGTTaGTGCCAGCCCACATGGTGGGCCCGTGGTGGGCCC +
Preference number: 6 (lower is better)
Translates to: APPVHRRTQSLS*CQPTWWARGGP
Trigger: GGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCTATGCACTGGAGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp GGGTGGCTCCGGGGTGTCAGGTCCCATGCTGTGGGCTaGATCAGGGCTTCCATCAAGGCTCTGTGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: GWLRGVRSHAVG*IRASIKALWGQ
Trigger: CTGGCCCCACAGAGCCTTGATGGAAGCCCTGATCCAGCCCACAGCATGGGACCTGACACCCCGGAGCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 72 bp TGCCGGCACCTCCAGTGCATAGGCGAACACAGAGCCTaGGTTGGTGCCAGCCCACATGGTGGGCCCGTGGTG +
Preference number: 6 (lower is better)
Translates to: CRHLQCIGEHRA*VGASPHGGPVV
Trigger: CACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCTATGCACTGGAGGTGCCGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp CCTCCAGTGCATAGGCGAACACAGAGCCTGAGTTGGTaGCAGCCCACATGGTGGGCCCGTGGTGGGCCCCAT +
Preference number: 6 (lower is better)
Translates to: PPVHRRTQSLSW*QPTWWARGGPH
Trigger: ATGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCTATGCACTGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp CGCTTGCTCAGGCCGCTTCTCACCACCCACTGCTGCTaGCGGCACCTCCAGTGCATAGGCGAACACAGAGCC +
Preference number: 6 (lower is better)
Translates to: RLLRPLLTTHCC*RHLQCIGEHRA
Trigger: GGCTCTGTGTTCGCCTATGCACTGGAGGTGCCGGCAGCAGCAGTGGGTGGTGAGAAGCGGCCTGAGCAAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp CTCCACCGCTTGCTCAGGCCGCTTCTCACCACCCACTaGTGCTGCCGGCACCTCCAGTGCATAGGCGAACAC +
Preference number: 6 (lower is better)
Translates to: LHRLLRPLLTTH*CCRHLQCIGEH
Trigger: GTGTTCGCCTATGCACTGGAGGTGCCGGCAGCAGCAGTGGGTGGTGAGAAGCGGCCTGAGCAAGCGGTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp GCGTGGTGTCAGCACTGGTGGCTGAGTCGATGGACATaGGTGAGAGTGCAGCCTCGGGTGGCTCCGGGGTGT +
Preference number: 6 (lower is better)
Translates to: AWCQHWWLSRWT*VRVQPRVAPGC
Trigger: ACACCCCGGAGCCACCCGAGGCTGCACTCTCACCCATGTCCATCGACTCAGCCACCAGTGCTGACACCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp CCCGGGAGAGCGGACCCTCCATGGCCAGGGAGTCATTaGGGTGAAGAGTGCACCTGGGGAAGACAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: PGRADPPWPGSH*GEECTWGRQGP
Trigger: TGGACCCTGTCTTCCCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCTCCCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621229.1
ENST00000639303.1
CDS CAA 72 bp TCGCAGGCCACACTGGCAAACGTGGCCAGTGCCACCTaGCGCACACGACAGCCCTCATGGGCCGTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: SQATLANVASAT*RTRQPSWAVSL
Trigger: CAAGCTGACGGCCCATGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CAA 90 bp GGGAAGCCATGCTCCACAGTCTTGTTGAAGGCGAAAAGCTCCTGCTaGAGCTTCTCGCGCTGCGGGTCGGCGCCCTGCCGCCGGAACCGA +
Preference number: 6 (lower is better)
Translates to: GKPCSTVLLKAKSSC*SFSRCGSAPCRRNR
Trigger: TCGGTTCCGGCGGCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGCCTTCAACAAGACTGTGGAGCATGGCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS TCA 72 bp GAGAATCTTTGTGGGGTCCCGCAGGTGTCCCTGGAGTaGCTCCACGGGGCCCAGTGCCTTCCCACAGCGGTA +
Preference number: 6 (lower is better)
Translates to: ENLCGVPQVSLE*LHGAQCLPTAV
Trigger: TACCGCTGTGGGAAGGCACTGGGCCCCGTGGAGTCACTCCAGGGACACCTGCGGGACCCCACAAAGATTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp TTGAAGGCGAAAAGCTCCTGCTTGAGCTTCTCGCGCTaGGGGTCGGCGCCCTGCCGCCGGAACCGAAACTTC +
Preference number: 6 (lower is better)
Translates to: LKAKSSCLSFSR*GSAPCRRNRNF
Trigger: GAAGTTTCGGTTCCGGCGGCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGCCTTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS GCA 72 bp AGCTGCTGGTTCCCCAGGAAGATGTGGTCCACACACTaGGAGGCCTGGTTCCAGATGACCAGCAGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: SCWFPRKMWSTH*EAWFQMTSRPR
Trigger: CCGGGGCCTGCTGGTCATCTGGAACCAGGCCTCGCAGTGTGTGGACCACATCTTCCTGGGGAACCAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp CAGCGTGCTCACAGTCTGTCTGGAAGAGGCCAGCTGTaGTCAGCTTATAGAGCGGCCGCAGCGCCACACCCG +
Preference number: 6 (lower is better)
Translates to: QRAHSLSGRGQL*SAYRAAAAPHP
Trigger: CGGGTGTGGCGCTGCGGCCGCTCTATAAGCTGAGCACAGCTGGCCTCTTCCAGACAGACTGTGAGCACGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp CACCGCTTGCTCAGGCCGCTTCTCACCACCCACTGCTaGTGCCGGCACCTCCAGTGCATAGGCGAACACAGA +
Preference number: 6 (lower is better)
Translates to: HRLLRPLLTTHC*CRHLQCIGEHR
Trigger: TCTGTGTTCGCCTATGCACTGGAGGTGCCGGCAGCAGCAGTGGGTGGTGAGAAGCGGCCTGAGCAAGCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp ATAGTCCTCGCAGGCCACACTGGCAAACGTGGCCAGTaGCACCTTGCGCACACGACAGCCCTCATGGGCCGT +
Preference number: 6 (lower is better)
Translates to: IVLAGHTGKRGQ*HLAHTTALMGR
Trigger: ACGGCCCATGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGAGGACTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp AGGCGAACACAGAGCCTGAGTTGGTGCCAGCCCACATaGTGGGCCCGTGGTGGGCCCCATCTCGAAGGAATG +
Preference number: 6 (lower is better)
Translates to: RRTQSLSWCQPT*WARGGPHLEGM
Trigger: CATTCCTTCGAGATGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp CCAGGCAGGTCTCAGCATAGTCCTCGCAGGCCACACTaGCAAACGTGGCCAGTGCCACCTTGCGCACACGAC +
Preference number: 6 (lower is better)
Translates to: PGRSQHSPRRPH*QTWPVPPCAHD
Trigger: GTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGAGGACTATGCTGAGACCTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp GGAGGAGCTGCATGGGGCCCAAGGCAGCCACGTAGGTaGAGGAGCAGGAAGACTACAGAGGCCGGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: GGAAWGPRQPRR*RSRKTTEAGRK
Trigger: CTTTCTCCCGGCCTCTGTAGTCTTCCTGCTCCTCCACCTACGTGGCTGCCTTGGGCCCCATGCAGCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CAA 72 bp TGCTCCACAGTCTTGTTGAAGGCGAAAAGCTCCTGCTaGAGCTTCTCGCGCTGCGGGTCGGCGCCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: CSTVLLKAKSSC*SFSRCGSAPCR
Trigger: GCGGCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGCCTTCAACAAGACTGTGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS CAA 90 bp TCACCCCAGCCAGCCCCACCCAGAGCCCTATTCCCACCTTGGCTTTaGCCTGTGCCAGTCCATCTCCCTTTCCACCAGACCCTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: SPQPAPPRALFPPWL*PVPVHLPFHQTLQL
Trigger: GAGCTGGAGGGTCTGGTGGAAAGGGAGATGGACTGGCACAGGCAAAAGCCAAGGTGGGAATAGGGCTCTGGGTGGGGCTGGCTGGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 72 bp TGCCAAAAGCCACGAGGCTCCACTCGGTGTGGAGTGTaGCAGCGGTTACAGCAGCTGGCGGCAGGCACTGCA +
Preference number: 6 (lower is better)
Translates to: CQKPRGSTRCGV*QRLQQLAAGTA
Trigger: TGCAGTGCCTGCCGCCAGCTGCTGTAACCGCTGTCACACTCCACACCGAGTGGAGCCTCGTGGCTTTTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 72 bp GAGAGCGGACCCTCCATGGCCAGGGAGTCATTGGGGTaGAGAGTGCACCTGGGGAAGACAGGGTCCAGTAGG +
Preference number: 6 (lower is better)
Translates to: ESGPSMARESLG*RVHLGKTGSSR
Trigger: CCTACTGGACCCTGTCTTCCCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGGAGGGTCCGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621229.1
ENST00000639303.1
CDS GCA 72 bp CCATGCTCCACAGTCTTGTTGAAGGCGAAAAGCTCCTaGTTGAGCTTCTCGCGCTGCGGGTCGGCGCCCTGC +
Preference number: 6 (lower is better)
Translates to: PCSTVLLKAKSS*LSFSRCGSAPC
Trigger: GCAGGGCGCCGACCCGCAGCGCGAGAAGCTCAAGCAGGAGCTTTTCGCCTTCAACAAGACTGTGGAGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS GCA 72 bp GTGTGGTGGCTACCGTGGGCTGCAGCGTTGGGAAGCTaGCGGCATCCACAGACCAGACAGCATAGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: VWWLPWAAALGS*RHPQTRQHSCH
Trigger: ATGGCAGCTATGCTGTCTGGTCTGTGGATGCCGGCAGCTTCCCAACGCTGCAGCCCACGGTAGCCACCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp CTCCACGTCGTGGGGGCAGGCCTGCTCAGCCAGCTGTaGATTGGCTTCCTGCAACTTGCTGCTGGCATTAGC +
Preference number: 6 (lower is better)
Translates to: LHVVGAGLLSQL*IGFLQLAAGIS
Trigger: GCTAATGCCAGCAGCAAGTTGCAGGAAGCCAATGCACAGCTGGCTGAGCAGGCCTGCCCCCACGACGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp CCAATGAGAATCTTTGTGGGGTCCCGCAGGTGTCCCTaGAGTGACTCCACGGGGCCCAGTGCCTTCCCACAG +
Preference number: 6 (lower is better)
Translates to: PMRIFVGSRRCP*SDSTGPSAFPQ
Trigger: CTGTGGGAAGGCACTGGGCCCCGTGGAGTCACTCCAGGGACACCTGCGGGACCCCACAAAGATTCTCATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp CGAACACAGAGCCTGAGTTGGTGCCAGCCCACATGGTaGGCCCGTGGTGGGCCCCATCTCGAAGGAATGTGT +
Preference number: 6 (lower is better)
Translates to: RTQSLSWCQPTW*ARGGPHLEGMC
Trigger: ACACATTCCTTCGAGATGGGGCCCACCACGGGCCCACCATGTGGGCTGGCACCAACTCAGGCTCTGTGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp CGTCCCCTGTCGTGTCCAGCGTGGTGTCAGCACTGGTaGCTGAGTCGATGGACATGGGTGAGAGTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: RPLSCPAWCQHW*LSRWTWVRVQP
Trigger: AGGCTGCACTCTCACCCATGTCCATCGACTCAGCCACCAGTGCTGACACCACGCTGGACACGACAGGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp GCAGGGGAAGGAGTAGACAAATCTAGGGCGCAGCCTTaGGACACAGCTGCAGAGTCCAAGCAGGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: AGEGVDKSRAQP*DTAAESKQGPR
Trigger: CCTGGGGCCCTGCTTGGACTCTGCAGCTGTGTCCCAAGGCTGCGCCCTAGATTTGTCTACTCCTTCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CAA 72 bp ACGTCGTGGGGGCAGGCCTGCTCAGCCAGCTGTGCATaGGCTTCCTGCAACTTGCTGCTGGCATTAGCAGCC +
Preference number: 6 (lower is better)
Translates to: TSWGQACSASCA*ASCNLLLALAA
Trigger: GGCTGCTAATGCCAGCAGCAAGTTGCAGGAAGCCAATGCACAGCTGGCTGAGCAGGCCTGCCCCCACGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CAA 90 bp AGCACCTGGCCTGCAGTGCCAGCCACCACCATCTGGGCTGTATACTaGCAGAGAGCAACCTTCTGCACGCCAAGCCGGGGATCGTCACTG +
Preference number: 6 (lower is better)
Translates to: STWPAVPATTIWAVY*QRATFCTPSRGSSL
Trigger: CAGTGACGATCCCCGGCTTGGCGTGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAGGCCAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS CAA 90 bp ACACGACTCTTGCGAATGCGCCGGAAAGACTGGCGCAGTGACTTCTaGAGAGACTTCACCCGGGAGAGCGGACCCTCCATGGCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: TRLLRMRRKDWRSDF*RDFTRESGPSMARE
Trigger: CTCCCTGGCCATGGAGGGTCCGCTCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CAA 90 bp CCTACCTGGCCTGCAGTGCCAGCCACCACCATCTGGGCTGTATACTaGCAGAGAGCAACCTTCTGCACGCCAAGCCGGGGATCGTCACTG +
Preference number: 6 (lower is better)
Translates to: PTWPAVPATTIWAVY*QRATFCTPSRGSSL
Trigger: CAGTGACGATCCCCGGCTTGGCGTGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAGGCCAGGTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 72 bp TGCGAATGCGCCGGAAAGACTGGCGCAGTGACTTCTTaGGAGACTTCACCCGGGAGAGCGGACCCTCCATGG +
Preference number: 6 (lower is better)
Translates to: CECAGKTGAVTS*ETSPGRADPPW
Trigger: CCATGGAGGGTCCGCTCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCATTCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp TCCTGGAGGAGGTCTATGATGGCCACGCTGACCGCCTaGTCCACCGGCACATCACTAAGCTCCAGTACCAGC +
Preference number: 6 (lower is better)
Translates to: SWRRSMMATLTA*STGTSLSSSTS
Trigger: GCTGGTACTGGAGCTTAGTGATGTGCCGGTGGAGCAGGCGGTCAGCGTGGCCATCATAGACCTCCTCCAGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS GCA 72 bp ATCTCCAACCCAGGGGACACCCAGCCCTACCTGGCCTaGAGTGCCAGCCACCACCATCTGGGCTGTATACTT +
Preference number: 6 (lower is better)
Translates to: ISNPGDTQPYLA*SASHHHLGCIL
Trigger: AAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAGGCCAGGTAGGGCTGGGTGTCCCCTGGGTTGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 72 bp GACCCTCCATGGCCAGGGAGTCATTGGGGTGAAGAGTaGACCTGGGGAAGACAGGGTCCAGTAGGCCAAAGC +
Preference number: 6 (lower is better)
Translates to: DPPWPGSHWGEE*TWGRQGPVGQS
Trigger: GCTTTGGCCTACTGGACCCTGTCTTCCCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000621229.1
ENST00000639303.1
CDS CCA 72 bp TCTCAGCATAGTCCTCGCAGGCCACACTGGCAAACGTaGCCAGTGCCACCTTGCGCACACGACAGCCCTCAT +
Preference number: 6 (lower is better)
Translates to: SQHSPRRPHWQT*PVPPCAHDSPH
Trigger: ATGAGGGCTGTCGTGTGCGCAAGGTGGCACTGGCCACGTTTGCCAGTGTGGCCTGCGAGGACTATGCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp GGCTCAGGGGTCTGGGCCCAGTACAGGAGCCTTGTGTaGCACAGTGAGATAGGACTAGATTCCTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: GSGVWAQYRSLV*HSEIGLDSCPP
Trigger: GGGAGGGCAGGAATCTAGTCCTATCTCACTGTGCCACACAAGGCTCCTGTACTGGGCCCAGACCCCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 72 bp ACGACTCTTGCGAATGCGCCGGAAAGACTGGCGCAGTaGCTTCTTGAGAGACTTCACCCGGGAGAGCGGACC +
Preference number: 6 (lower is better)
Translates to: TTLANAPERLAQ*LLERLHPGERT
Trigger: GGTCCGCTCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 72 bp GGTCTGGGCCCAGTACAGGAGCCTTGTGTGGCACAGTaGGATAGGACTAGATTCCTGCCCTCCCAGGGGAAC +
Preference number: 6 (lower is better)
Translates to: GLGPVQEPCVAQ*DRTRFLPSQGN
Trigger: GTTCCCCTGGGAGGGCAGGAATCTAGTCCTATCTCACTGTGCCACACAAGGCTCCTGTACTGGGCCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 72 bp CTGCAGTGCCAGCCACCACCATCTGGGCTGTATACTTaGAGAGAGCAACCTTCTGCACGCCAAGCCGGGGAT +
Preference number: 6 (lower is better)
Translates to: LQCQPPPSGLYT*REQPSARQAGD
Trigger: ATCCCCGGCTTGGCGTGCAGAAGGTTGCTCTCTGCAAGTATACAGCCCAGATGGTGGTGGCTGGCACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CCA 72 bp CCATGGCCAGGGAGTCATTGGGGTGAAGAGTGCACCTaGGGAAGACAGGGTCCAGTAGGCCAAAGCCATGAC +
Preference number: 6 (lower is better)
Translates to: PWPGSHWGEECT*GRQGPVGQSHD
Trigger: GTCATGGCTTTGGCCTACTGGACCCTGTCTTCCCCAGGTGCACTCTTCACCCCAATGACTCCCTGGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000621229.1
ENST00000639303.1
CDS CAA 72 bp TTGCGAATGCGCCGGAAAGACTGGCGCAGTGACTTCTaGAGAGACTTCACCCGGGAGAGCGGACCCTCCATG +
Preference number: 6 (lower is better)
Translates to: LRMRRKDWRSDF*RDFTRESGPSM
Trigger: CATGGAGGGTCCGCTCTCCCGGGTGAAGTCTCTCAAGAAGTCACTGCGCCAGTCTTTCCGGCGCATTCGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CAA 90 bp GCATTGGCTTCCTGCAACTTGCTGCTGGCATTAGCAGCCCGCTTCTaGCCAGAGACACGACTCTTGCGAATGCGCCGGAAAGACTGGCGC +
Preference number: 6 (lower is better)
Translates to: ALASCNLLLALAARF*PETRLLRMRRKDWR
Trigger: GCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGTGTCTCTGGCAAGAAGCGGGCTGCTAATGCCAGCAGCAAGTTGCAGGAAGCCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 72 bp ATCCACAGACCAGACAGCATAGCTGCCATCGCTGTGTaGGCTGACCACAGTGCTGCTATCACGCCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: IHRPDSIAAIAV*ADHSAAITPPA
Trigger: TGCTGGGGGCGTGATAGCAGCACTGTGGTCAGCTCACACAGCGATGGCAGCTATGCTGTCTGGTCTGTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CAA 72 bp GCATTAGCAGCCCGCTTCTTGCCAGAGACACGACTCTaGCGAATGCGCCGGAAAGACTGGCGCAGTGACTTC +
Preference number: 6 (lower is better)
Translates to: ALAARFLPETRL*RMRRKDWRSDF
Trigger: GAAGTCACTGCGCCAGTCTTTCCGGCGCATTCGCAAGAGTCGTGTCTCTGGCAAGAAGCGGGCTGCTAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CAA 72 bp GAACCAAGGTCCAGGGAGGTTTCATTCCAAACCACCTaGGGCAAGGAGGAACTACCTGGTCCCACCAGGGGC +
Preference number: 6 (lower is better)
Translates to: EPRSREVSFQTT*GKEELPGPTRG
Trigger: GCCCCTGGTGGGACCAGGTAGTTCCTCCTTGCCCAAGGTGGTTTGGAATGAAACCTCCCTGGACCTTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 72 bp CACAGTGGTGACCAAGACACACTAGTCCCTGCCCTCTaGGGGCAAAGTGTCCACCCTTACCCTGAGCCTCTA +
Preference number: 6 (lower is better)
Translates to: HSGDQDTLVPAL*GQSVHPYPEPL
Trigger: TAGAGGCTCAGGGTAAGGGTGGACACTTTGCCCTCAGAGGGCAGGGACTAGTGTGTCTTGGTCACCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 72 bp TGGGCACAGCCATTATGGTGGACAATCTCCCAGAGATaGAGACTGCTGTCATCAAGCAGGGACAGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: WAQPLWWTISQR*RLLSSSRDRRR
Trigger: CCGCCTCCTGTCCCTGCTTGATGACAGCAGTCTGCATCTCTGGGAGATTGTCCACCATAATGGCTGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000621229.1
ENST00000639303.1
ENST00000640494.2
CDS CCA 72 bp TCTGGCCTTCCTCATTTGATCAGGATGGCACAGGCGTaGGCCTCGTCTTCTGCCAGGTTCCTCAGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SGLPHLIRMAQA*ASSSARFLRFF
Trigger: GAAGAACCTGAGGAACCTGGCAGAAGACGAGGCCCACGCCTGTGCCATCCTGATCAAATGAGGAAGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000639748.1
ENST00000640494.2
CDS CAA 72 bp TCCTGCAACTTGCTGCTGGCATTAGCAGCCCGCTTCTaGCCAGAGACACGACTCTTGCGAATGCGCCGGAAA +
Preference number: 6 (lower is better)
Translates to: SCNLLLALAARF*PETRLLRMRRK
Trigger: TTTCCGGCGCATTCGCAAGAGTCGTGTCTCTGGCAAGAAGCGGGCTGCTAATGCCAGCAGCAAGTTGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS TCA 72 bp TGGGGGTTCTGCCTGCACTGGAGCAGCCATCAGAGGTaGTCAAGAGTAAGGCAGTCACAGAACAGAGCATGG +
Preference number: 6 (lower is better)
Translates to: WGFCLHWSSHQR*SRVRQSQNRAW
Trigger: CCATGCTCTGTTCTGTGACTGCCTTACTCTTGATCACCTCTGATGGCTGCTCCAGTGCAGGCAGAACCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 72 bp CCTCCTGTATGTCATGTGAGTGCCGGAGCACAGCACTaGCATGAGTTCCCTCCTCTCAACACTGTGGTTCCC +
Preference number: 6 (lower is better)
Translates to: PPVCHVSAGAQH*HEFPPLNTVVP
Trigger: GGGAACCACAGTGTTGAGAGGAGGGAACTCATGTCAGTGCTGTGCTCCGGCACTCACATGACATACAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 72 bp TGGGGGTCATCAAATTCATCCTCGGGCCGTGTGCTGTaGACTGTGAAGAAGTCGATGATGCGGGAAGTGAAG +
Preference number: 6 (lower is better)
Translates to: WGSSNSSSGRVL*TVKKSMMREVK
Trigger: CTTCACTTCCCGCATCATCGACTTCTTCACAGTGCACAGCACACGGCCCGAGGATGAATTTGATGACCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000316843.9
ENST00000479155.1
ENST00000621229.1
ENST00000639303.1
ENST00000639748.1
ENST00000640494.2
CDS CAA 90 bp ATTAACAGGAGGTGGCAAAGGGGGACATGTAGAGAACAGAGGACTTaGGGGGTTCTGCCTGCACTGGAGCAGCCATCAGAGGTGATCAAG +
Preference number: 6 (lower is better)
Translates to: INRRWQRGTCREQRT*GVLPALEQPSEVIK
Trigger: CTTGATCACCTCTGATGGCTGCTCCAGTGCAGGCAGAACCCCCAAAGTCCTCTGTTCTCTACATGTCCCCCTTTGCCACCTCCTGTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 72 bp CCCTGCCCTCTGAGGGCAAAGTGTCCACCCTTACCCTaGGCCTCTATCTCCCATTTAGCAATAAGGACACAT +
Preference number: 6 (lower is better)
Translates to: PCPLRAKCPPLP*ASISHLAIRTH
Trigger: ATGTGTCCTTATTGCTAAATGGGAGATAGAGGCTCAGGGTAAGGGTGGACACTTTGCCCTCAGAGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CCA 72 bp AAGCACTCACTGAATGCCTACTGTATACCAAGGCCCTaGCTGAGCACAAGGAACACAGTGGTGACCAAGACA +
Preference number: 6 (lower is better)
Translates to: KHSLNAYCIPRP*LSTRNTVVTKT
Trigger: TGTCTTGGTCACCACTGTGTTCCTTGTGCTCAGCCAGGGCCTTGGTATACAGTAGGCATTCAGTGAGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CAA 72 bp CTGAGCCTCTATCTCCCATTTAGCAATAAGGACACATaGAGCACCTCCTGTATGTCATGTGAGTGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: LSLYLPFSNKDT*STSCMSCECRS
Trigger: GCTCCGGCACTCACATGACATACAGGAGGTGCTCAATGTGTCCTTATTGCTAAATGGGAGATAGAGGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 72 bp GTCTTCAGTTCATCAGCTAAACAAGCACTCACTGAATaGCTACTGTATACCAAGGCCCTGGCTGAGCACAAG +
Preference number: 6 (lower is better)
Translates to: VFSSSAKQALTE*LLYTKALAEHK
Trigger: CTTGTGCTCAGCCAGGGCCTTGGTATACAGTAGGCATTCAGTGAGTGCTTGTTTAGCTGATGAACTGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS TCA 72 bp GTACTCCAGAAACCTCCCAGGCCCTCTCTCGATCTGTaGCAAAATCAATCACAGAGTTATGCCAAGGTTATG +
Preference number: 6 (lower is better)
Translates to: VLQKPPRPSLDL*QNQSQSYAKVM
Trigger: CATAACCTTGGCATAACTCTGTGATTGATTTTGTCACAGATCGAGAGAGGGCCTGGGAGGTTTCTGGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS GCA 72 bp CTCTCTCGATCTGTGACAAAATCAATCACAGAGTTATaGCAAGGTTATGCAGCTGGTATCCCCATCAAACCT +
Preference number: 6 (lower is better)
Translates to: LSRSVTKSITEL*QGYAAGIPIKP
Trigger: AGGTTTGATGGGGATACCAGCTGCATAACCTTGGCATAACTCTGTGATTGATTTTGTCACAGATCGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1
CDS CCA 72 bp AAAATCAATCACAGAGTTATGCCAAGGTTATGCAGCTaGTATCCCCATCAAACCTCGAGTTCTTTCGAGGCA +
Preference number: 6 (lower is better)
Translates to: KINHRVMPRLCS*YPHQTSSSFEA
Trigger: TGCCTCGAAAGAACTCGAGGTTTGATGGGGATACCAGCTGCATAACCTTGGCATAACTCTGTGATTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479155.1
ENST00000639748.1