RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LKAAEAR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171695

Ensembl transcript IDs: ENST00000302096.5, ENST00000308906.6

Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CCCTTGCGCCCGCCCTCCTTCGCTGGCGGCGGCATCCTCCCGCCCTaGGGAGGGAGGAGGGCGTCCCGTCGGTGCCGGGGCTGGCACCGG +
Preference number: 5 (lower is better)
Translates to: PLRPPSFAGGGILPP*GGRRASRRCRGWHR
Trigger: CCGGTGCCAGCCCCGGCACCGACGGGACGCCCTCCTCCCTCCGCAGGGCGGGAGGATGCCGCCGCCAGCGAAGGAGGGCGGGCGCAAGGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS CCA 90 bp CTTCCCGCTTCGCTCCCGCGGGCCCTTGCGCCCGCCCTCCTTCGCTaGCGGCGGCATCCTCCCGCCCTGCGGAGGGAGGAGGGCGTCCCG +
Preference number: 5 (lower is better)
Translates to: LPASLPRALAPALLR*RRHPPALRREEGVP
Trigger: CGGGACGCCCTCCTCCCTCCGCAGGGCGGGAGGATGCCGCCGCCAGCGAAGGAGGGCGGGCGCAAGGGCCCGCGGGAGCGAAGCGGGAAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS TCA 90 bp AGCGCAGCCGCAGGGCGCGGACTCGCCCGCGGGCCTCCGCTGCCTTaGGGACGCCGAGGAGCCGGTTCTGGCGCTCGGCGGGCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: SAAAGRGLARGPPLP*GRRGAGSGARRAAR
Trigger: TCGAGCTGCCCGCCGAGCGCCAGAACCGGCTCCTCGGCGTCCTCAAGGCAGCGGAGGCCCGCGGGCGAGTCCGCGCCCTGCGGCTGCGCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 90 bp GGTGTAGCGCAGCCGCAGGGCGCGGACTCGCCCGCGGGCCTCCGCTaGCTTGAGGACGCCGAGGAGCCGGTTCTGGCGCTCGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: GVAQPQGADSPAGLR*LEDAEEPVLALGGQ
Trigger: CTGCCCGCCGAGCGCCAGAACCGGCTCCTCGGCGTCCTCAAGGCAGCGGAGGCCCGCGGGCGAGTCCGCGCCCTGCGGCTGCGCTACACC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 90 bp CGGCGGGCAGCTCGAGCGACTGCGTCCACGGGCGCGGGTCGGGCATaGGGTACCCCGGTTCCACCGACCCGCACGGGAAGGTGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: RRAARATASTGAGRA*GTPVPPTRTGRWRP
Trigger: CGGCCTCCACCTTCCCGTGCGGGTCGGTGGAACCGGGGTACCGCATGCCCGACCCGCGCCCGTGGACGCAGTCGCTCGAGCTGCCCGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 90 bp CGCTCTTGGCGGTCCAGGGGGTCCGGGATCCGCGCGGGCTTCAGCTaGGGCGGCAGGAACAGCTCCAGCCGGATGGCGGCGCGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: RSWRSRGSGIRAGFS*GGRNSSSRMAARAD
Trigger: GTCCGCGCGCGCCGCCATCCGGCTGGAGCTGTTCCTGCCGCCGCAGCTGAAGCCCGCGCGGATCCCGGACCCCCTGGACCGCCAAGAGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302096.5
CDS CCA 90 bp GGAGCATGGCCGCCAGTCCCTGCGGCGTCAGGGCCCAGCCCGGCTTaGGGGGCTCTGTCGCGGGCGCCCCCTTGGCACGCTCCTCACCCT +
Preference number: 5 (lower is better)
Translates to: GAWPPVPAASGPSPA*GALSRAPPWHAPHP
Trigger: AGGGTGAGGAGCGTGCCAAGGGGGCGCCCGCGACAGAGCCCCCCAAGCCGGGCTGGGCCCTGACGCCGCAGGGACTGGCGGCCATGCTCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 90 bp ACGCCGAGGAGCCGGTTCTGGCGCTCGGCGGGCAGCTCGAGCGACTaGGTCCACGGGCGCGGGTCGGGCATGCGGTACCCCGGTTCCACC +
Preference number: 5 (lower is better)
Translates to: TPRSRFWRSAGSSSD*VHGRGSGMRYPGST
Trigger: GGTGGAACCGGGGTACCGCATGCCCGACCCGCGCCCGTGGACGCAGTCGCTCGAGCTGCCCGCCGAGCGCCAGAACCGGCTCCTCGGCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 90 bp ACCTCTTGGCGGTCCAGGGGGTCCGGGATCCGCGCGGGCTTCAGCTaGGGCGGCAGGAACAGCTCCAGCCGGATGGCGGCGCGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: TSWRSRGSGIRAGFS*GGRNSSSRMAARAD
Trigger: GTCCGCGCGCGCCGCCATCCGGCTGGAGCTGTTCCTGCCGCCGCAGCTGAAGCCCGCGCGGATCCCGGACCCCCTGGACCGCCAAGAGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308906.6
CDS CCA 90 bp GAGGCCGCCGCGCCCACGTCCTCCAGCAGGTCGCCGAAGAGCAGATaGCGGTGGCGCTGCGCAGGGAGCATGGCCGCCAGTCCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: EAAAPTSSSRSPKSR*RWRCAGSMAASPCG
Trigger: GCCGCAGGGACTGGCGGCCATGCTCCCTGCGCAGCGCCACCGCCATCTGCTCTTCGGCGACCTGCTGGAGGACGTGGGCGCGGCGGCCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS CCA 90 bp GCCGCGCCCACGTCCTCCAGCAGGTCGCCGAAGAGCAGATGGCGGTaGCGCTGCGCAGGGAGCATGGCCGCCAGTCCCTGCGGCGTCAGG +
Preference number: 5 (lower is better)
Translates to: AAPTSSSRSPKSRWR*RCAGSMAASPCGVR
Trigger: CCTGACGCCGCAGGGACTGGCGGCCATGCTCCCTGCGCAGCGCCACCGCCATCTGCTCTTCGGCGACCTGCTGGAGGACGTGGGCGCGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 90 bp CCCACGTCCTCCAGCAGGTCGCCGAAGAGCAGATGGCGGTGGCGCTaGGCAGGGAGCATGGCCGCCAGTCCCTGCGGCGTCAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PTSSSRSPKSRWRWR*AGSMAASPCGVRAQ
Trigger: CTGGGCCCTGACGCCGCAGGGACTGGCGGCCATGCTCCCTGCGCAGCGCCACCGCCATCTGCTCTTCGGCGACCTGCTGGAGGACGTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 90 bp GGCGGCAGGAACAGCTCCAGCCGGATGGCGGCGCGCGCGGACTTCTaGCGCTGGATGAGCAGCGCGATCTCCTCGGCCCGCATGCGGGTG +
Preference number: 5 (lower is better)
Translates to: GGRNSSSRMAARADF*RWMSSAISSARMRV
Trigger: CACCCGCATGCGGGCCGAGGAGATCGCGCTGCTCATCCAGCGGCAGAAGTCCGCGCGCGCCGCCATCCGGCTGGAGCTGTTCCTGCCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS CCA 90 bp GGTCGGGCATGCGGTACCCCGGTTCCACCGACCCGCACGGGAAGGTaGAGGCCGCCGCGCCCACGTCCTCCAGCAGGTCGCCGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: GRACGTPVPPTRTGR*RPPRPRPPAGRRRA
Trigger: TGCTCTTCGGCGACCTGCTGGAGGACGTGGGCGCGGCGGCCTCCACCTTCCCGTGCGGGTCGGTGGAACCGGGGTACCGCATGCCCGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS TCA 90 bp ACAGCTCCAGCCGGATGGCGGCGCGCGCGGACTTCTGCCGCTGGATaGGCAGCGCGATCTCCTCGGCCCGCATGCGGGTGTAGCGCAGCC +
Preference number: 5 (lower is better)
Translates to: TAPAGWRRARTSAAG*AARSPRPACGCSAA
Trigger: GGCTGCGCTACACCCGCATGCGGGCCGAGGAGATCGCGCTGCTCATCCAGCGGCAGAAGTCCGCGCGCGCCGCCATCCGGCTGGAGCTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS CCA 72 bp TCGCTCCCGCGGGCCCTTGCGCCCGCCCTCCTTCGCTaGCGGCGGCATCCTCCCGCCCTGCGGAGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: SLPRALAPALLR*RRHPPALRREE
Trigger: CTCCTCCCTCCGCAGGGCGGGAGGATGCCGCCGCCAGCGAAGGAGGGCGGGCGCAAGGGCCCGCGGGAGCGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS CAA 72 bp CGCAGGGCGCGGACTCGCCCGCGGGCCTCCGCTGCCTaGAGGACGCCGAGGAGCCGGTTCTGGCGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: RRARTRPRASAA*RTPRSRFWRSA
Trigger: CGCCGAGCGCCAGAACCGGCTCCTCGGCGTCCTCAAGGCAGCGGAGGCCCGCGGGCGAGTCCGCGCCCTGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 72 bp CAGCCGCAGGGCGCGGACTCGCCCGCGGGCCTCCGCTaGCTTGAGGACGCCGAGGAGCCGGTTCTGGCGCTC +
Preference number: 6 (lower is better)
Translates to: QPQGADSPAGLR*LEDAEEPVLAL
Trigger: GAGCGCCAGAACCGGCTCCTCGGCGTCCTCAAGGCAGCGGAGGCCCGCGGGCGAGTCCGCGCCCTGCGGCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 72 bp AGCCGGTTCTGGCGCTCGGCGGGCAGCTCGAGCGACTaGGTCCACGGGCGCGGGTCGGGCATGCGGTACCCC +
Preference number: 6 (lower is better)
Translates to: SRFWRSAGSSSD*VHGRGSGMRYP
Trigger: GGGGTACCGCATGCCCGACCCGCGCCCGTGGACGCAGTCGCTCGAGCTGCCCGCCGAGCGCCAGAACCGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 72 bp CGGTCCAGGGGGTCCGGGATCCGCGCGGGCTTCAGCTaGGGCGGCAGGAACAGCTCCAGCCGGATGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RSRGSGIRAGFS*GGRNSSSRMAA
Trigger: CGCCGCCATCCGGCTGGAGCTGTTCCTGCCGCCGCAGCTGAAGCCCGCGCGGATCCCGGACCCCCTGGACCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 72 bp GCTCGAGCGACTGCGTCCACGGGCGCGGGTCGGGCATaGGGTACCCCGGTTCCACCGACCCGCACGGGAAGG +
Preference number: 6 (lower is better)
Translates to: ARATASTGAGRA*GTPVPPTRTGR
Trigger: CCTTCCCGTGCGGGTCGGTGGAACCGGGGTACCGCATGCCCGACCCGCGCCCGTGGACGCAGTCGCTCGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS CCA 72 bp TGCGGTACCCCGGTTCCACCGACCCGCACGGGAAGGTaGAGGCCGCCGCGCCCACGTCCTCCAGCAGGTCGC +
Preference number: 6 (lower is better)
Translates to: CGTPVPPTRTGR*RPPRPRPPAGR
Trigger: GCGACCTGCTGGAGGACGTGGGCGCGGCGGCCTCCACCTTCCCGTGCGGGTCGGTGGAACCGGGGTACCGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 72 bp TCCAGCAGGTCGCCGAAGAGCAGATGGCGGTGGCGCTaGGCAGGGAGCATGGCCGCCAGTCCCTGCGGCGTC +
Preference number: 6 (lower is better)
Translates to: SSRSPKSRWRWR*AGSMAASPCGV
Trigger: GACGCCGCAGGGACTGGCGGCCATGCTCCCTGCGCAGCGCCACCGCCATCTGCTCTTCGGCGACCTGCTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS GCA 72 bp AACAGCTCCAGCCGGATGGCGGCGCGCGCGGACTTCTaGCGCTGGATGAGCAGCGCGATCTCCTCGGCCCGC +
Preference number: 6 (lower is better)
Translates to: NSSSRMAARADF*RWMSSAISSAR
Trigger: GCGGGCCGAGGAGATCGCGCTGCTCATCCAGCGGCAGAAGTCCGCGCGCGCCGCCATCCGGCTGGAGCTGTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS CCA 72 bp GCGCCCACGTCCTCCAGCAGGTCGCCGAAGAGCAGATaGCGGTGGCGCTGCGCAGGGAGCATGGCCGCCAGT +
Preference number: 6 (lower is better)
Translates to: APTSSSRSPKSR*RWRCAGSMAAS
Trigger: ACTGGCGGCCATGCTCCCTGCGCAGCGCCACCGCCATCTGCTCTTCGGCGACCTGCTGGAGGACGTGGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS CCA 72 bp ACGTCCTCCAGCAGGTCGCCGAAGAGCAGATGGCGGTaGCGCTGCGCAGGGAGCATGGCCGCCAGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: TSSSRSPKSRWR*RCAGSMAASPC
Trigger: GCAGGGACTGGCGGCCATGCTCCCTGCGCAGCGCCACCGCCATCTGCTCTTCGGCGACCTGCTGGAGGACGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302096.5
ENST00000308906.6
CDS CAA 90 bp AACGTGCGCCCCAGCTCCCGCCCGCTGGGCTCTCCGCAGTCGGTTTaGAGTTCCGCACCCCCAGCCTCTGAGCTTTGCCCAGGCGCTCTC +
Preference number: 6 (lower is better)
Translates to: NVRPSSRPLGSPQSV*SSAPPASELCPGAL
Trigger: GAGAGCGCCTGGGCAAAGCTCAGAGGCTGGGGGTGCGGAACTCAAAACCGACTGCGGAGAGCCCAGCGGGCGGGAGCTGGGGCGCACGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302096.5
CDS TCA 72 bp CCAGCTCCCGCCCGCTGGGCTCTCCGCAGTCGGTTTTaGGTTCCGCACCCCCAGCCTCTGAGCTTTGCCCAG +
Preference number: 6 (lower is better)
Translates to: PAPARWALRSRF*VPHPQPLSFAQ
Trigger: CTGGGCAAAGCTCAGAGGCTGGGGGTGCGGAACTCAAAACCGACTGCGGAGAGCCCAGCGGGCGGGAGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302096.5
CDS CAA 72 bp CCCAGCTCCCGCCCGCTGGGCTCTCCGCAGTCGGTTTaGAGTTCCGCACCCCCAGCCTCTGAGCTTTGCCCA +
Preference number: 6 (lower is better)
Translates to: PSSRPLGSPQSV*SSAPPASELCP
Trigger: TGGGCAAAGCTCAGAGGCTGGGGGTGCGGAACTCAAAACCGACTGCGGAGAGCCCAGCGGGCGGGAGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302096.5