Pregenerated sensors for LIX1L (Homo sapiens)
Ensembl gene IDs: ENSG00000271601Ensembl transcript IDs: ENST00000604000.4
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGTTCAGGAACTAAAGGCAAAATCTTCATACTCATACCCTGTTTaGGTCCAAGAGGAAGCAGGAATGAGAGTAAGGGTGGGGCACATA | + |
|
Preference number: 1 (lower is better) Translates to: SVQELKAKSSYSYPV*VQEEAGMRVRVGHI Trigger: TATGTGCCCCACCCTTACTCTCATTCCTGCTTCCTCTTGGACTCAAACAGGGTATGAGTATGAAGATTTTGCCTTTAGTTCCTGAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR GCA 90 bp | GCTTATAAATGTCAAACAGACACACCTGGTGTGTCTAGCTGTTTTTaGCTTTACTCCAACCCGACGTGTTTCATGGAATACAAACATGGG | + |
|
Preference number: 1 (lower is better) Translates to: AYKCQTDTPGVSSCF*LYSNPTCFMEYKHG Trigger: CCCATGTTTGTATTCCATGAAACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTTGACATTTATAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGGGCAGGAGAATGGTGTaGATCTGGGAGGCGGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: CCTTGYFSLMSPRREVGEGRRMV*IWEAEV Trigger: AACCTCCGCCTCCCAGATTCACACCATTCTCCTGCC...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR TCA 90 bp | TATAAATGTCAAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCGGCAGGAGAGTGGCGTaGACCCGGGAGGCGGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: YKCQTDTPGVSSCFCLYSGRRVA*TREAEL Trigger: AAGCTCCGCCTCCCGGGTTCACGCCACTCTCCTGCC...GGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTTGACATTTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR CCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTCACGAGGTCAGGAGATaGAGACCGTCCTGGCTAACA | + |
|
Preference number: 2 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCHEVRR*RPSWLT Trigger: TGTTAGCCAGGACGGTCTCCATCTCCTGACCTCGTG...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGAGGCTGTGGAAAGCCTaGGGAGTTATGTGGGTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: CCTTGYFSLMSPRREVGERLWKA*GVMWVD Trigger: ATCCACCCACATAACTCCCCAGGCTTTCCACAGCCT...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR CCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTAACACACAAATAGTTTaGGAGGCCGAGGCAGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCNTQIV*EAEAGG Trigger: TCCACCTGCCTCGGCCTCCCAAACTATTTGTGTGTT...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR TCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTGCCTGGGCAAAAGTGTaGGACTCTGTCTTCCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCAWAKV*DSVFQK Trigger: TTTTTGGAAGACAGAGTCTCACACTTTTGCCCAGGC...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGCTGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGCAAGAGAATCGCTTaGACCCTGGAGGCAGAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FSCCTTGYFSLMSPRREVGKRIA*TLEAEV Trigger: AACCTCTGCCTCCAGGGTTCAAGCGATTCTCTTGCC...CACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCAGCTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGCTTTCTACTAATAGCTaGAGGCAGGAAGGTCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CCTTGYFSLMSPRREVGELSTNS*RQEGPN Trigger: GTTTGGACCTTCCTGCCTGCAGCTATTAGTAGAAAG...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR CCA 90 bp | AAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTAAAAATGATAGGGCCTaGAGAATTCAAGGAAGCCCG | + |
|
Preference number: 2 (lower is better) Translates to: KQTHLVCLAVFAFTPTRRKNDRA*RIQGSP Trigger: CGGGCTTCCTTGAATTCTCCAGGCCCTATCATTTTT...ACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR GCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTAGTTGCCTTTCATCTTaGCCCTATCAAATCCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCSCLSS*PYQIQK Trigger: CTTTTGGATTTGATAGGGGCAAGATGAAAGGCAACT...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR CCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTTGTATAATTGTTAAGTaGGAAGTCCAATTGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCCIIVK*EVQLQE Trigger: TTCCTGCAATTGGACTTCCCACTTAACAATTATACA...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR TCA 90 bp | TTTAGAGGGAATACTGAAAGAGAATCAGTTTCAACCATAACCCCCATCTACTGTTACTCATACCCTGTTTaGGTCCAAGAGGAAGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FRGNTERESVSTITPIYCYSYPV*VQEEAG Trigger: TCCTGCTTCCTCTTGGACTCAAACAGGGTATGAGTA...ACAGTAGATGGGGGTTATGGTTGAAACTGATTCTCTTTCAGTATTCCCTCTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGAAGTGGGAAGTCCAATTaGAGGAATACTAAATGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GLENSRKPVSSTNKIVAGSGKSN*RNTKCS Trigger: GGAACATTTAGTATTCCTGCAATTGGACTTCCCACT...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGTCTAGACTACTAGTATaGTATACATATGCCCTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CCTTGYFSLMSPRREVGESRLLV*YTYALE Trigger: TTCTAGGGCATATGTATACCATACTAGTAGTCTAGA...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGAGTGTCAATTAGGAAGTaGCAAAATACTAAAGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GLENSRKPVSSTNKIVAGVSIRK*QNTKVS Trigger: TGAGACTTTAGTATTTTGGCACTTCCTAATTGACAC...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR GCA 90 bp | TTTAGAGGGAATACTGAAAGAGAATCAGTTTCAACCATAACCCCCATCTACTGTAGTATGGTATACATATaGCCTAGAAGCAACTTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FRGNTERESVSTITPIYCSMVYI*PRSNLG Trigger: ACCTAAGTTGCTTCTAGGGCATATGTATACCATACT...ACAGTAGATGGGGGTTATGGTTGAAACTGATTCTCTTTCAGTATTCCCTCTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGAGGCAAGAGAATCGCTaGAACCCTGGAGGCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CCTTGYFSLMSPRREVGERQENR*NPGGRG Trigger: ACCTCTGCCTCCAGGGTTCAAGCGATTCTCTTGCCT...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR GCA 72 bp | TGTCAAACAGACACACCTGGTGTGTCTAGCTGTTTTTaGCTTTACTCCAACCCGACGTGTTTCATGGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: CQTDTPGVSSCF*LYSNPTCFMEY Trigger: GTATTCCATGAAACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR-3UTR CAA 90 bp | TATAAATGTCAAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAAGTTGCCTTTCATCTaGCCCCTATCAAATCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: YKCQTDTPGVSSCFCLYSKLPFI*PLSNPK Trigger: TTTTGGATTTGATAGGGGCAAGATGAAAGGCAACTT...GGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTTGACATTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| 3UTR TCA 72 bp | ATATGCCCTAGAAGCAACTTAGGTAGTAAACTCCCATaGATTGTTTGTAATTTATCTTGTCCCTGGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: ICPRSNLGSKLP*IVCNLSCPWAV Trigger: AACTGCCCAGGGACAAGATAAATTACAAACAATTCATGGGAGTTTACTACCTAAGTTGCTTCTAGGGCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGGGCAGGAGAGTGGCGTaGACCCGGGAGGCGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCTTGYFSLMSPRREVGEGRRVA*TREAEL Trigger: AAGCTCCGCCTCCCGGGTTCACGCCACTCTCCTGCC...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTCCAGGCTGCAGCCGCTaGGCTCGCATAGTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCPGCSR*ARIVSI Trigger: GATGGAGACTATGCGAGCGCAGCGGCTGCAGCCTGG...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGGCGCAGCTCCTTGCCTaGCAGTCGGGCTTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCTTGYFSLMSPRREVGEAQLLA*QSGFIQ Trigger: CTGGATGAAGCCCGACTGGCAGGCAAGGAGCTGCGC...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | CTTAGCGGGAATAAGGGGAACATGGTTCTCACTAACCAAATAGGACTGATAACGCATCCCGGCCGCCAATaGAGTAGCGCCCCGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGNKGNMVLTNQIGLITHPGRQ*SSAPEP Trigger: AGGCTCCGGGGCGCTACTCCATTGGCGGCCGGGATG...CGTTATCAGTCCTATTTGGTTAGTGAGAACCATGTTCCCCTTATTCCCGCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGAGAGTGCCCCTCCCGCTaGTGCCCACACCAGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRKPVSSTNKIVAGECPSR*CPHQAA Trigger: TGCAGCCTGGTGTGGGCACCAGCGGGAGGGGCACTC...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | CTTAGCGGGAATAAGGGGAACATGGTTCTCACTAACCAAATAGGACTGATAACGGTGCCCACACCAGGCTaGAGCCGCTGCGCTCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSGNKGNMVLTNQIGLITVPTPG*SRCARI Trigger: TATGCGAGCGCAGCGGCTGCAGCCTGGTGTGGGCAC...CGTTATCAGTCCTATTTGGTTAGTGAGAACCATGTTCCCCTTATTCCCGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGGGAAGCGCAGCTCCTTaGCTGCCAGTCGGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CCTTGYFSLMSPRREVGEGSAAP*LPVGLH Trigger: ATGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCC...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TTTAGCTGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGCGGAGCCTGCCAGCCTaGCGAGCTAACGGTCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSCCTTGYFSLMSPRREVRSLPA*RANGPN Trigger: GTTGGGACCGTTAGCTCGGCAGGCTGGCAGGCTCCG...CACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCAGCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGGGAATACTGAAAGAGAATCAGTTTCAACCATAACCCCCATCTACTGTTGCCCCTCCCGCTGGTaGCCACACCAGGCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRGNTERESVSTITPIYCCPSRW*PHQAAA Trigger: GGCTGCAGCCTGGTGTGGGCACCAGCGGGAGGGGCA...ACAGTAGATGGGGGTTATGGTTGAAACTGATTCTCTTTCAGTATTCCCTCTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGGGCAAGAGAATCGCTTaGACCCTGGAGGCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CCTTGYFSLMSPRREVGEGKRIA*TLEAEV Trigger: AACCTCTGCCTCCAGGGTTCAAGCGATTCTCTTGCC...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTTCAGCACCACGGGACTaGTTCATCTGCCAGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCSAPRD*FICQNS Trigger: GGAATTCTGGCAGATGAAGCAGTCCCGTGGTGCTGA...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTGGGCCTCAGCTTTTGTaGGGCAAAACTGGAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCGPQLL*GKTGNS Trigger: GGAGTTTCCAGTTTTGCCCCACAAAAGCTGAGGCCC...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | CTTAGCGGGAATAAGGGGAACATGGTTCTCACTAACCAAATAGGACTGATAACGGGCAGGAGAATGGTGTaGATCTGGGAGGCGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSGNKGNMVLTNQIGLITGRRMV*IWEAEV Trigger: AACCTCCGCCTCCCAGATTCACACCATTCTCCTGCC...CGTTATCAGTCCTATTTGGTTAGTGAGAACCATGTTCCCCTTATTCCCGCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTTCTTTCTTCTCCTTGTaGAAGCGCAGCTCCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCSFFSL*KRSSLP Trigger: AGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGA...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | AAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTAGGCTGTGGAAAGCCTaGGGAGTTATGTGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQTHLVCLAVFAFTPTRRRLWKA*GVMWVD Trigger: ATCCACCCACATAACTCCCCAGGCTTTCCACAGCCT...ACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGAGCTGAGGCAGGAGAATaGTGTGAATCTGGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRKPVSSTNKIVAGAEAGE*CESGRR Trigger: CCGCCTCCCAGATTCACACCATTCTCCTGCCTCAGC...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | CTTAGCGGGAATAAGGGGAACATGGTTCTCACTAACCAAATAGGACTGATAACGTTCCCCCAGGCAGGGTaGCATAGCAGACATAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGNKGNMVLTNQIGLITFPQAG*HSRHKE Trigger: CTCCTTATGTCTGCTATGTCACCCTGCCTGGGGGAA...CGTTATCAGTCCTATTTGGTTAGTGAGAACCATGTTCCCCTTATTCCCGCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TATAAATGTCAAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCCAGCTCTCTAGACAGTaGCCCCGGCACACTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKCQTDTPGVSSCFCLYSQLSRQ*PRHTLL Trigger: GAGCAGAGTGTGCCGGGGGCACTGTCTAGAGAGCTG...GGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTTGACATTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGTGGAAGAATGCATATTaGCCAACTGCCCAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCTTGYFSLMSPRREVGEWKNAY*PTAQQP Trigger: TGGCTGCTGGGCAGTTGGGCAATATGCATTCTTCCA...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTGTGTCTAGCTGTTTTTaGCTTTACTCCAACCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCVSSCF*LYSNPT Trigger: CGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACAC...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | TTTAGAGGGAATACTGAAAGAGAATCAGTTTCAACCATAACCCCCATCTACTGTAGCCCTGCGTGTGCTTaGCGAAGCTCCTCACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: FRGNTERESVSTITPIYCSPACA*RSSSPR Trigger: CCGTGGTGAGGAGCTTCGCCAAGCACACGCAGGGCT...ACAGTAGATGGGGGTTATGGTTGAAACTGATTCTCTTTCAGTATTCCCTCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTACCAATCCCTGTATTTaGGTTGTCAGCTTCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCTNPCI*VVSFLP Trigger: AGGGAGGAAGCTGACAACCCAAATACAGGGATTGGT...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGACACGAGGTCAGGAGATaGAGACCGTCCTGGCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRKPVSSTNKIVAGHEVRR*RPSWLT Trigger: TGTTAGCCAGGACGGTCTCCATCTCCTGACCTCGTG...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGAGGGGAGTTATGTGGGTaGATGCCTAGCAGTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRKPVSSTNKIVAGGELCG*MPSSWK Trigger: CTTCCAACTGCTAGGCATCCACCCACATAACTCCCC...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTAAAAATGATAGGGCCTaGAGAATTCAAGGAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCKNDRA*RIQGSP Trigger: CGGGCTTCCTTGAATTCTCCAGGCCCTATCATTTTT...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGATGTTGGATTCCAGCATaGATCGGAAGGCACCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRKPVSSTNKIVAGCWIPA*IGRHQS Trigger: GGATTGGTGCCTTCCGATTCATGCTGGAATCCAACA...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTACTCCAACATTGATTTaGCCTTGTTGGATTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCTPTLI*PCWIPA Trigger: TGCTGGAATCCAACAAGGGCAAATCAATGTTGGAGT...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGAGTTATGTGGGTGGATaGCTAGCAGTTGGAAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: CCTTGYFSLMSPRREVGESYVGG*LAVGRM Trigger: CATTCTTCCAACTGCTAGGCATCCACCCACATAACT...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | CTTAGCGGGAATAAGGGGAACATGGTTCTCACTAACCAAATAGGACTGATAACGAACACACAAATAGTTTaGGAGGCCGAGGCAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSGNKGNMVLTNQIGLITNTQIV*EAEAGG Trigger: TCCACCTGCCTCGGCCTCCCAAACTATTTGTGTGTT...CGTTATCAGTCCTATTTGGTTAGTGAGAACCATGTTCCCCTTATTCCCGCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGATCCAAGGCCATTTGGTaGCGAATATCATCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRKPVSSTNKIVAGSKAIW*RISSSR Trigger: CCTGGATGATGATATTCGCCACCAAATGGCCTTGGA...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGACAGTCCAAGGCCATTTaGTGGCGAATATCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRKPVSSTNKIVAGQSKAI*WRISSS Trigger: GGATGATGATATTCGCCACCAAATGGCCTTGGACTG...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | TATAAATGTCAAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCATCTGCCAGAATTCCTaGAGTGCCTCCACCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: YKCQTDTPGVSSCFCLYSICQNS*SASTTF Trigger: GAATGTGGTGGAGGCACTTCAGGAATTCTGGCAGAT...GGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTTGACATTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGACTGGAACTCCAACATTaGTTTGCCCTTGTTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRKPVSSTNKIVAGLELQH*FALVGF Trigger: GAATCCAACAAGGGCAAATCAATGTTGGAGTTCCAG...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | TTTAGCTGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGTACTCATACCCTGTTTaGGTCCAAGAGGAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSCCTTGYFSLMSPRREVYSYPV*VQEEAG Trigger: TCCTGCTTCCTCTTGGACTCAAACAGGGTATGAGTA...CACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCAGCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TATAAATGTCAAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCCCAGAATTCCTGAAGTaGCTCCACCACATTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: YKCQTDTPGVSSCFCLYSPEFLK*LHHIHS Trigger: CGAGTGAATGTGGTGGAGGCACTTCAGGAATTCTGG...GGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTTGACATTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGAGTGGGAAGTCCAATTaGAGGAATACTAAATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CCTTGYFSLMSPRREVGESGKSN*RNTKCS Trigger: GGAACATTTAGTATTCCTGCAATTGGACTTCCCACT...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGACATAAGGAGGGCTGTTaGAGGGAACCATCTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLENSRKPVSSTNKIVAGHKEGC*REPSHK Trigger: TTTATGAGATGGTTCCCTCCAACAGCCCTCCTTATG...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | AAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTACTGTCATTAGCTCCTaGAACTCCAACATTGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQTHLVCLAVFAFTPTRRTVISS*NSNIDL Trigger: CAAATCAATGTTGGAGTTCCAGGAGCTAATGACAGT...ACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGGGGGAGGGAGAATACTTTAGCTaGTGTACTACAGGTTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCTTGYFSLMSPRREVGEGEYFS*CTTGYF Trigger: GAAATAACCTGTAGTACAGCAGCTAAAGTATTCTCC...CTCCCCCACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | AAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTAGGAGTGTTGATGAGTaGCAGCTTATAAATGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQTHLVCLAVFAFTPTRRRSVDE*QLINVK Trigger: TTTGACATTTATAAGCTGGCACTCATCAACACTCCT...ACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | TTTAGCTGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGTGGATGCCTAGCAGTTaGAAGAATGCATATTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSCCTTGYFSLMSPRREVWMPSS*KNAYCP Trigger: TGGGCAATATGCATTCTTCCAACTGCTAGGCATCCA...CACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCAGCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | TTTAGCTGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGACCCGACGTGTTTCATaGAATACAAACATGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSCCTTGYFSLMSPRREVTRRVS*NTNMGL Trigger: AAGCCCCATGTTTGTATTCCATGAAACACGTCGGGT...CACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCAGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | TTTAGCTGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGTTCCAGTGTAGCAGTTaGAAAACTGTCATTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSCCTTGYFSLMSPRREVFQCSS*KTVISS Trigger: GGAGCTAATGACAGTTTTTCAACTGCTACACTGGAA...CACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCAGCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | TATAAATGTCAAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCTTTGTGGGGCAAAACTaGAAACTCCCAAAGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YKCQTDTPGVSSCFCLYSFVGQN*KLPKQL Trigger: AAGCTGCTTTGGGAGTTTCCAGTTTTGCCCCACAAA...GGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTTGACATTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR TCA 90 bp | TTTAGCTGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGTGTTGTTGTTACACTTaGACTTTCTGTTTGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: FSCCTTGYFSLMSPRREVCCCYT*TFCLEP Trigger: AGGTTCCAAACAGAAAGTTCAAGTGTAACAACAACA...CACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCAGCTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR GCA 90 bp | TTTAGAGGGAATACTGAAAGAGAATCAGTTTCAACCATAACCCCCATCTACTGTGTGTCAATTAGGAAGTaGCAAAATACTAAAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRGNTERESVSTITPIYCVSIRK*QNTKVS Trigger: TGAGACTTTAGTATTTTGGCACTTCCTAATTGACAC...ACAGTAGATGGGGGTTATGGTTGAAACTGATTCTCTTTCAGTATTCCCTCTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CCA 90 bp | TTTAGAGGGAATACTGAAAGAGAATCAGTTTCAACCATAACCCCCATCTACTGTTCTAGACTACTAGTATaGTATACATATGCCCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRGNTERESVSTITPIYCSRLLV*YTYALE Trigger: TTCTAGGGCATATGTATACCATACTAGTAGTCTAGA...ACAGTAGATGGGGGTTATGGTTGAAACTGATTCTCTTTCAGTATTCCCTCTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 90 bp | TGGCGGCCGCGGCCCCAGTCACTCCGGGCCGCAGCGCTCGGAGAGTaGCCCTCCCGCTGGTGCCCACACCAGGCTGCAGCCGCTGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WRPRPQSLRAAALGE*PSRWCPHQAAAAAL Trigger: GAGCGCAGCGGCTGCAGCCTGGTGTGGGCACCAGCGGGAGGGGCACTCTCCGAGCGCTGCGGCCCGGAGTGACTGGGGCCGCGGCCGCCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 90 bp | CGGAGAGTGCCCCTCCCGCTGGTGCCCACACCAGGCTGCAGCCGCTaGGCTCGCATAGTCTCCATCCCGGCCGCCAATGGAGTAGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRVPLPLVPTPGCSR*ARIVSIPAANGVAP Trigger: GGGCGCTACTCCATTGGCGGCCGGGATGGAGACTATGCGAGCGCAGCGGCTGCAGCCTGGTGTGGGCACCAGCGGGAGGGGCACTCTCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 90 bp | TCCATCCCGGCCGCCAATGGAGTAGCGCCCCGGAGCCTGCCAGCCTaGCGAGCTAACGGTCCCAACCACCCCAGTCAGCTAGCGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SIPAANGVAPRSLPA*RANGPNHPSQLAPG Trigger: CCCAGGCGCTAGCTGACTGGGGTGGTTGGGACCGTTAGCTCGGCAGGCTGGCAGGCTCCGGGGCGCTACTCCATTGGCGGCCGGGATGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 90 bp | GGCTTCATCCAGCTCCCGCTCAGTAGAGGCCAGCTCTCTAGACAGTaGCCCCGGCACACTCTGCTCCCGGCTCACCCAGTCCAAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GFIQLPLSRGQLSRQ*PRHTLLPAHPVQGH Trigger: ATGGCCTTGGACTGGGTGAGCCGGGAGCAGAGTGTGCCGGGGGCACTGTCTAGAGAGCTGGCCTCTACTGAGCGGGAGCTGGATGAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 90 bp | GAAGTGCCTCCACCACATTCACTCGGCCATAGCCCTGCGTGTGCTTaGCGAAGCTCCTCACCACGGCCTCCACGGCCTCTCGCAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: EVPPPHSLGHSPACA*RSSSPRPPRPLAAL Trigger: CAGTGCTGCGAGAGGCCGTGGAGGCCGTGGTGAGGAGCTTCGCCAAGCACACGCAGGGCTATGGCCGAGTGAATGTGGTGGAGGCACTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 90 bp | CGCTCAGTAGAGGCCAGCTCTCTAGACAGTGCCCCCGGCACACTCTaGTCCCGGCTCACCCAGTCCAAGGCCATTTGGTGGCGAATATCA | + |
|
Preference number: 5 (lower is better) Translates to: RSVEASSLDSAPGTL*SRLTQSKAIWWRIS Trigger: TGATATTCGCCACCAAATGGCCTTGGACTGGGTGAGCCGGGAGCAGAGTGTGCCGGGGGCACTGTCTAGAGAGCTGGCCTCTACTGAGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 90 bp | CCCAACTGCCCAGCAGCCAGCACAAGAATATCTTTCTTCTCCTTGTaGAAGCGCAGCTCCTTGCCTGCCAGTCGGGCTTCATCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PNCPAASTRISFFSL*KRSSLPASRASSSS Trigger: GGAGCTGGATGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTTGTGCTGGCTGCTGGGCAGTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 90 bp | CACAAGAATATCTTTCTTCTCCTTGTGGAAGCGCAGCTCCTTGCCTaGCAGTCGGGCTTCATCCAGCTCCCGCTCAGTAGAGGCCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HKNIFLLLVEAQLLA*QSGFIQLPLSRGQL Trigger: GAGCTGGCCTCTACTGAGCGGGAGCTGGATGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 90 bp | GGCTGTGGAAAGCCTGGGGAGTTATGTGGGTGGATGCCTAGCAGTTaGAAGAATGCATATTGCCCAACTGCCCAGCAGCCAGCACAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GCGKPGELCGWMPSS*KNAYCPTAQQPAQE Trigger: TTCTTGTGCTGGCTGCTGGGCAGTTGGGCAATATGCATTCTTCCAACTGCTAGGCATCCACCCACATAACTCCCCAGGCTTTCCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTTCCGGGCCTCAGCTTTaGTGGGGCAAAACTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCSGPQL*WGKTGN Trigger: GTTTCCAGTTTTGCCCCACAAAAGCTGAGGCCCGGA...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | CTTAGCGGGAATAAGGGGAACATGGTTCTCACTAACCAAATAGGACTGATAACGTGGAAGCGCAGCTCCTaGCCTGCCAGTCGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSGNKGNMVLTNQIGLITWKRSS*PASRAS Trigger: TGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCA...CGTTATCAGTCCTATTTGGTTAGTGAGAACCATGTTCCCCTTATTCCCGCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 90 bp | GGGGAGTTATGTGGGTGGATGCCTAGCAGTTGGAAGAATGCATATTaGCCAACTGCCCAGCAGCCAGCACAAGAATATCTTTCTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GELCGWMPSSWKNAY*PTAQQPAQEYLSSP Trigger: AGGAGAAGAAAGATATTCTTGTGCTGGCTGCTGGGCAGTTGGGCAATATGCATTCTTCCAACTGCTAGGCATCCACCCACATAACTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 90 bp | CTTGTTGGATTCCAGCATGAATCGGAAGGCACCAATCCCTGTATTTaGGTTGTCAGCTTCCTCCCTGTTGCCATTAAAAGATGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVGFQHESEGTNPCI*VVSFLPVAIKRCQG Trigger: GCCCTGGCATCTTTTAATGGCAACAGGGAGGAAGCTGACAACCCAAATACAGGGATTGGTGCCTTCCGATTCATGCTGGAATCCAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTTCAGCTTCCTCCCTGTaGCCATTAAAAGATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCSASSL*PLKDAR Trigger: CCTGGCATCTTTTAATGGCAACAGGGAGGAAGCTGA...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | AAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTCACCAATCCCTGTATTaGGGTTGTCAGCTTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KQTHLVCLAVFAFTPTRRHQSLY*GCQLPP Trigger: GGGAGGAAGCTGACAACCCAAATACAGGGATTGGTG...ACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS TCA 90 bp | GCTCCTGGAACTCCAACATTGATTTGCCCTTGTTGGATTCCAGCATaGATCGGAAGGCACCAATCCCTGTATTTGGGTTGTCAGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: APGTPTLICPCWIPA*IGRHQSLYLGCQLP Trigger: AGGAAGCTGACAACCCAAATACAGGGATTGGTGCCTTCCGATTCATGCTGGAATCCAACAAGGGCAAATCAATGTTGGAGTTCCAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTATATCTTTCTTCTCCTaGTGGAAGCGCAGCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCISFFS*WKRSSL Trigger: CAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATAT...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | CTTAGCGGGAATAAGGGGAACATGGTTCTCACTAACCAAATAGGACTGATAACGAGGCAAGAGAATCGCTaGAACCCTGGAGGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSGNKGNMVLTNQIGLITRQENR*NPGGRG Trigger: ACCTCTGCCTCCAGGGTTCAAGCGATTCTCTTGCCT...CGTTATCAGTCCTATTTGGTTAGTGAGAACCATGTTCCCCTTATTCCCGCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTAACTCCAACATTGATTaGCCCTTGTTGGATTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCNSNID*PLLDSS Trigger: GCTGGAATCCAACAAGGGCAAATCAATGTTGGAGTT...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | ACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTGTCCTGGAACTCCAACATaGATTTGCCCTTGTTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: TDTPGVSSCFCLYSNPTCPGTPT*ICPCWI Trigger: AATCCAACAAGGGCAAATCAATGTTGGAGTTCCAGG...ACACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | TATAAATGTCAAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCCTCCTGCCGAGAGCATaGTCGTTCCCTCATGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YKCQTDTPGVSSCFCLYSLLPRA*SFPHGL Trigger: AAGGCCATGAGGGAACGACAATGCTCTCGGCAGGAG...GGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTTGACATTTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | CTTAGCGGGAATAAGGGGAACATGGTTCTCACTAACCAAATAGGACTGATAACGAAACACACAAATAGTTaGGGAGGCCGAGGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSGNKGNMVLTNQIGLITKHTNS*GGRGRW Trigger: CCACCTGCCTCGGCCTCCCAAACTATTTGTGTGTTT...CGTTATCAGTCCTATTTGGTTAGTGAGAACCATGTTCCCCTTATTCCCGCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | GGCCTGGAGAATTCAAGGAAGCCCGTTTCAAGCACTAATAAAATTGTAGCTGGACCAGTCCAAGGCCATTaGGTGGCGAATATCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: GLENSRKPVSSTNKIVAGPVQGH*VANIII Trigger: GATGATGATATTCGCCACCAAATGGCCTTGGACTGG...TCCAGCTACAATTTTATTAGTGCTTGAAACGGGCTTCCTTGAATTCTCCAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | TTTAGAGGGAATACTGAAAGAGAATCAGTTTCAACCATAACCCCCATCTACTGTTCATTAGCGCAATCTTaGCAGCACTCCTCCGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FRGNTERESVSTITPIYCSLAQS*QHSSGP Trigger: AGGCCCGGAGGAGTGCTGCAAAGATTGCGCTAATGA...ACAGTAGATGGGGGTTATGGTTGAAACTGATTCTCTTTCAGTATTCCCTCTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | TTTAGCTGCTGTACTACAGGTTATTTCTCTCTTATGTCACCCAGGAGAGAAGTGATCCCTGTATTTGGGTaGTCAGCTTCCTCCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSCCTTGYFSLMSPRREVIPVFG*SASSLL Trigger: CAACAGGGAGGAAGCTGACAACCCAAATACAGGGAT...CACTTCTCTCCTGGGTGACATAAGAGAGAAATAACCTGTAGTACAGCAGCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | CTTAGCGGGAATAAGGGGAACATGGTTCTCACTAACCAAATAGGACTGATAACGATTGATTTGCCCTTGTaGGATTCCAGCATGAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSGNKGNMVLTNQIGLITIDLPL*DSSMNR Trigger: CCGATTCATGCTGGAATCCAACAAGGGCAAATCAAT...CGTTATCAGTCCTATTTGGTTAGTGAGAACCATGTTCCCCTTATTCCCGCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | AAACAGACACACCTGGTGTGTCTAGCTGTTTTTGCCTTTACTCCAACCCGACGTAAGTTGCCTTTCATCTaGCCCCTATCAAATCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KQTHLVCLAVFAFTPTRRKLPFI*PLSNPK Trigger: TTTTGGATTTGATAGGGGCAAGATGAAAGGCAACTT...ACGTCGGGTTGGAGTAAAGGCAAAAACAGCTAGACACACCAGGTGTGTCTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS-3UTR CAA 90 bp | TTTAGAGGGAATACTGAAAGAGAATCAGTTTCAACCATAACCCCCATCTACTGTTCAAAAGCAAGAAAGTaGCCTTTCATCTTGCCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: FRGNTERESVSTITPIYCSKARK*PFILPL Trigger: TAGGGGCAAGATGAAAGGCAACTTTCTTGCTTTTGA...ACAGTAGATGGGGGTTATGGTTGAAACTGATTCTCTTTCAGTATTCCCTCTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 72 bp | CGGCCCCAGTCACTCCGGGCCGCAGCGCTCGGAGAGTaGCCCTCCCGCTGGTGCCCACACCAGGCTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPQSLRAAALGE*PSRWCPHQAAA Trigger: GGCTGCAGCCTGGTGTGGGCACCAGCGGGAGGGGCACTCTCCGAGCGCTGCGGCCCGGAGTGACTGGGGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 72 bp | CTCCGGGCCGCAGCGCTCGGAGAGTGCCCCTCCCGCTaGTGCCCACACCAGGCTGCAGCCGCTGCGCTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRAAALGECPSR*CPHQAAAAALA Trigger: TGCGAGCGCAGCGGCTGCAGCCTGGTGTGGGCACCAGCGGGAGGGGCACTCTCCGAGCGCTGCGGCCCGGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 72 bp | CCGCTGCGCTCGCATAGTCTCCATCCCGGCCGCCAATaGAGTAGCGCCCCGGAGCCTGCCAGCCTGCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLRSHSLHPGRQ*SSAPEPASLPS Trigger: GCTCGGCAGGCTGGCAGGCTCCGGGGCGCTACTCCATTGGCGGCCGGGATGGAGACTATGCGAGCGCAGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 72 bp | CCCCTCCCGCTGGTGCCCACACCAGGCTGCAGCCGCTaGGCTCGCATAGTCTCCATCCCGGCCGCCAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: PLPLVPTPGCSR*ARIVSIPAANG Trigger: TCCATTGGCGGCCGGGATGGAGACTATGCGAGCGCAGCGGCTGCAGCCTGGTGTGGGCACCAGCGGGAGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 72 bp | GCCGCCAATGGAGTAGCGCCCCGGAGCCTGCCAGCCTaGCGAGCTAACGGTCCCAACCACCCCAGTCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: AANGVAPRSLPA*RANGPNHPSQL Trigger: TAGCTGACTGGGGTGGTTGGGACCGTTAGCTCGGCAGGCTGGCAGGCTCCGGGGCGCTACTCCATTGGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 72 bp | CAGCTCCCGCTCAGTAGAGGCCAGCTCTCTAGACAGTaGCCCCGGCACACTCTGCTCCCGGCTCACCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QLPLSRGQLSRQ*PRHTLLPAHPV Trigger: GACTGGGTGAGCCGGGAGCAGAGTGTGCCGGGGGCACTGTCTAGAGAGCTGGCCTCTACTGAGCGGGAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 72 bp | CCACCACATTCACTCGGCCATAGCCCTGCGTGTGCTTaGCGAAGCTCCTCACCACGGCCTCCACGGCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PPHSLGHSPACA*RSSSPRPPRPL Trigger: GAGAGGCCGTGGAGGCCGTGGTGAGGAGCTTCGCCAAGCACACGCAGGGCTATGGCCGAGTGAATGTGGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 90 bp | TGCCCCCGGCACACTCTGCTCCCGGCTCACCCAGTCCAAGGCCATTaGGTGGCGAATATCATCATCCAGGGCCCGGTGCGAATAATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CPRHTLLPAHPVQGH*VANIIIQGPVRIMS Trigger: GCTCATTATTCGCACCGGGCCCTGGATGATGATATTCGCCACCAAATGGCCTTGGACTGGGTGAGCCGGGAGCAGAGTGTGCCGGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 72 bp | CACACTCTGCTCCCGGCTCACCCAGTCCAAGGCCATTaGGTGGCGAATATCATCATCCAGGGCCCGGTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: HTLLPAHPVQGH*VANIIIQGPVR Trigger: TCGCACCGGGCCCTGGATGATGATATTCGCCACCAAATGGCCTTGGACTGGGTGAGCCGGGAGCAGAGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 72 bp | ACACTCTGCTCCCGGCTCACCCAGTCCAAGGCCATTTaGTGGCGAATATCATCATCCAGGGCCCGGTGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: TLCSRLTQSKAI*WRISSSRARCE Trigger: TTCGCACCGGGCCCTGGATGATGATATTCGCCACCAAATGGCCTTGGACTGGGTGAGCCGGGAGCAGAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 90 bp | GCCAGCACAAGAATATCTTTCTTCTCCTTGTGGAAGCGCAGCTCCTaGCCTGCCAGTCGGGCTTCATCCAGCTCCCGCTCAGTAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASTRISFFSLWKRSS*PASRASSSSRSVEA Trigger: GGCCTCTACTGAGCGGGAGCTGGATGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTTGTGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 90 bp | TTGCCCAACTGCCCAGCAGCCAGCACAAGAATATCTTTCTTCTCCTaGTGGAAGCGCAGCTCCTTGCCTGCCAGTCGGGCTTCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LPNCPAASTRISFFS*WKRSSLPASRASSS Trigger: GCTGGATGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTTGTGCTGGCTGCTGGGCAGTTGGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 72 bp | ACCACGGGACTGCTTCATCTGCCAGAATTCCTGAAGTaGCTCCACCACATTCACTCGGCCATAGCCCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: TTGLLHLPEFLK*LHHIHSAIALR Trigger: ACGCAGGGCTATGGCCGAGTGAATGTGGTGGAGGCACTTCAGGAATTCTGGCAGATGAAGCAGTCCCGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 72 bp | ATCTTTCTTCTCCTTGTGGAAGCGCAGCTCCTTGCCTaGCAGTCGGGCTTCATCCAGCTCCCGCTCAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: IFLLLVEAQLLA*QSGFIQLPLSR Trigger: TCTACTGAGCGGGAGCTGGATGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 72 bp | GAATATCTTTCTTCTCCTTGTGGAAGCGCAGCTCCTTaGCTGCCAGTCGGGCTTCATCCAGCTCCCGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: EYLSSPCGSAAP*LPVGLHPAPAQ Trigger: CTGAGCGGGAGCTGGATGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 72 bp | TGCCCAGCAGCCAGCACAAGAATATCTTTCTTCTCCTaGTGGAAGCGCAGCTCCTTGCCTGCCAGTCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPAASTRISFFS*WKRSSLPASRA Trigger: AGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTTGTGCTGGCTGCTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS TCA 72 bp | ACTGGAAACTCCCAAAGCAGCTTCCCCCAGGCAGGGTaGCATAGCAGACATAAGGAGGGCTGTTGGAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TGNSQSSFPQAG*HSRHKEGCWRE Trigger: TTCCCTCCAACAGCCCTCCTTATGTCTGCTATGTCACCCTGCCTGGGGGAAGCTGCTTTGGGAGTTTCCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 72 bp | GCGCAATCTTTGCAGCACTCCTCCGGGCCTCAGCTTTaGTGGGGCAAAACTGGAAACTCCCAAAGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQSLQHSSGPQL*WGKTGNSQSSF Trigger: GAAGCTGCTTTGGGAGTTTCCAGTTTTGCCCCACAAAAGCTGAGGCCCGGAGGAGTGCTGCAAAGATTGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 72 bp | AGAATATCTTTCTTCTCCTTGTGGAAGCGCAGCTCCTaGCCTGCCAGTCGGGCTTCATCCAGCTCCCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RISFFSLWKRSS*PASRASSSSRS Trigger: TGAGCGGGAGCTGGATGAAGCCCGACTGGCAGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 72 bp | AAGCCTGGGGAGTTATGTGGGTGGATGCCTAGCAGTTaGAAGAATGCATATTGCCCAACTGCCCAGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KPGELCGWMPSS*KNAYCPTAQQP Trigger: TGGCTGCTGGGCAGTTGGGCAATATGCATTCTTCCAACTGCTAGGCATCCACCCACATAACTCCCCAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 72 bp | AAGGCTGTGGAAAGCCTGGGGAGTTATGTGGGTGGATaGCTAGCAGTTGGAAGAATGCATATTGCCCAACTG | + |
|
Preference number: 6 (lower is better) Translates to: KAVESLGSYVGG*LAVGRMHIAQL Trigger: CAGTTGGGCAATATGCATTCTTCCAACTGCTAGGCATCCACCCACATAACTCCCCAGGCTTTCCACAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 90 bp | TTGGATTCCAGCATGAATCGGAAGGCACCAATCCCTGTATTTGGGTaGTCAGCTTCCTCCCTGTTGCCATTAAAAGATGCCAGGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LDSSMNRKAPIPVFG*SASSLLPLKDARAS Trigger: TGAGGCCCTGGCATCTTTTAATGGCAACAGGGAGGAAGCTGACAACCCAAATACAGGGATTGGTGCCTTCCGATTCATGCTGGAATCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS GCA 72 bp | TGTGGGTGGATGCCTAGCAGTTGGAAGAATGCATATTaGCCAACTGCCCAGCAGCCAGCACAAGAATATCTT | + |
|
Preference number: 6 (lower is better) Translates to: CGWMPSSWKNAY*PTAQQPAQEYL Trigger: AAGATATTCTTGTGCTGGCTGCTGGGCAGTTGGGCAATATGCATTCTTCCAACTGCTAGGCATCCACCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 72 bp | AGCATGAATCGGAAGGCACCAATCCCTGTATTTGGGTaGTCAGCTTCCTCCCTGTTGCCATTAAAAGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SMNRKAPIPVFG*SASSLLPLKDA Trigger: GGCATCTTTTAATGGCAACAGGGAGGAAGCTGACAACCCAAATACAGGGATTGGTGCCTTCCGATTCATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CCA 72 bp | TTCCAGCATGAATCGGAAGGCACCAATCCCTGTATTTaGGTTGTCAGCTTCCTCCCTGTTGCCATTAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: FQHESEGTNPCI*VVSFLPVAIKR Trigger: TCTTTTAATGGCAACAGGGAGGAAGCTGACAACCCAAATACAGGGATTGGTGCCTTCCGATTCATGCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 72 bp | ATTAGCTCCTGGAACTCCAACATTGATTTGCCCTTGTaGGATTCCAGCATGAATCGGAAGGCACCAATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ISSWNSNIDLPL*DSSMNRKAPIP Trigger: AGGGATTGGTGCCTTCCGATTCATGCTGGAATCCAACAAGGGCAAATCAATGTTGGAGTTCCAGGAGCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 90 bp | AAAACTGTCATTAGCTCCTGGAACTCCAACATTGATTTGCCCTTGTaGGATTCCAGCATGAATCGGAAGGCACCAATCCCTGTATTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KTVISSWNSNIDLPL*DSSMNRKAPIPVFG Trigger: CCCAAATACAGGGATTGGTGCCTTCCGATTCATGCTGGAATCCAACAAGGGCAAATCAATGTTGGAGTTCCAGGAGCTAATGACAGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS TCA 72 bp | ACTCCAACATTGATTTGCCCTTGTTGGATTCCAGCATaGATCGGAAGGCACCAATCCCTGTATTTGGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TPTLICPCWIPA*IGRHQSLYLGC Trigger: ACAACCCAAATACAGGGATTGGTGCCTTCCGATTCATGCTGGAATCCAACAAGGGCAAATCAATGTTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||
| CDS CAA 72 bp | AAAACTGTCATTAGCTCCTGGAACTCCAACATTGATTaGCCCTTGTTGGATTCCAGCATGAATCGGAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KTVISSWNSNID*PLLDSSMNRKA Trigger: TGCCTTCCGATTCATGCTGGAATCCAACAAGGGCAAATCAATGTTGGAGTTCCAGGAGCTAATGACAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000604000.4 |
||