Pregenerated sensors for LIPT2 (Homo sapiens)
Ensembl gene IDs: ENSG00000175536Ensembl transcript IDs: ENST00000310109.5, ENST00000527115.1, ENST00000528085.1
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTCAGACTTCATGCTTCCCAAGGCAGGAGCATCCTGGCTGTTATaGGTACTCTTCAGTTGGGGCTGTCCTCTGAGATCAGTGTGCACT | + |
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Preference number: 1 (lower is better) Translates to: KSDFMLPKAGASWLL*VLFSWGCPLRSVCT Trigger: AGTGCACACTGATCTCAGAGGACAGCCCCAACTGAAGAGTACTCATAACAGCCAGGATGCTCCTGCCTTGGGAAGCATGAAGTCTGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| 3UTR TCA 90 bp | GAATGCACCATATGGAGCGCTGATCCTCCAGCCCAGCCAAGCCTTTaGATAAGTGCAGTTCCAGCTGACATCTTAACTGCAAGTTCGTGT | + |
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Preference number: 1 (lower is better) Translates to: ECTIWSADPPAQPSL*ISAVPADILTASSC Trigger: ACACGAACTTGCAGTTAAGATGTCAGCTGGAACTGCACTTATTCAAAGGCTTGGCTGGGCTGGAGGATCAGCGCTCCATATGGTGCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR TCA 90 bp | GAGCATCCTGGCTGTTATGAGTACTCTTCAGTTGGGGCTGTCCTCTaGGATCAGTGTGCACTTGTAGATCTCCTTAAAGGCCACAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: EHPGCYEYSSVGAVL*DQCALVDLLKGHKE Trigger: TTCCTTGTGGCCTTTAAGGAGATCTACAAGTGCACACTGATCTCAGAGGACAGCCCCAACTGAAGAGTACTCATAACAGCCAGGATGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| 3UTR CCA 90 bp | TCCCCTGACTTCTCATTCGAGGCTCTTTCCACTCTTAATAGGCTGTaGTGGCCATTCTTCAAGATGGCCCCTAATAATCCTCACCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SPDFSFEALSTLNRL*WPFFKMAPNNPHLL Trigger: CAGAAGGTGAGGATTATTAGGGGCCATCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGGAAAGAGCCTCGAATGAGAAGTCAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTCCCTTCCACACTGAACAGGGCTCATCTGTTAGAAGACTACAGAAATGCCTTCCCCCAAATTCCTaGCCCACAAACGAGATAATT | + |
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Preference number: 2 (lower is better) Translates to: CSPFHTEQGSSVRRLQKCLPPNS*PTNEII Trigger: AATTATCTCGTTTGTGGGTCAGGAATTTGGGGGAAG...GCATTTCTGTAGTCTTCTAACAGATGAGCCCTGTTCAGTGTGGAAGGGACTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR TCA 90 bp | GCCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCGCATCCTGGCTGTTATaGGTACTCTTCAGTTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: AIQRFDSHKIKGTRAQNCASWLL*VLFSWG Trigger: GCCCCAACTGAAGAGTACTCATAACAGCCAGGATGC...GCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| 3UTR-3UTR TCA 90 bp | TGCAGTCCCTTCCACACTGAACAGGGCTCATCTGTTAGAAGACTACAGAAATGCATGTCCTTAGTTTCATaGTCAGTGAATGACAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: CSPFHTEQGSSVRRLQKCMSLVS*SVNDRP Trigger: TGGCCTGTCATTCACTGATCATGAAACTAAGGACAT...GCATTTCTGTAGTCTTCTAACAGATGAGCCCTGTTCAGTGTGGAAGGGACTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR TCA 90 bp | CCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCTGTTGGGGCTGTCCTCTaGGATCAGTGTGCACTTGTA | + |
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Preference number: 2 (lower is better) Translates to: PFRDLIPTKSKELEPRIAVGAVL*DQCALV Trigger: TACAAGTGCACACTGATCTCAGAGGACAGCCCCAAC...AGCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| 3UTR CAA 90 bp | AAGGTTCTTCCCTTTTCCCTTTATTGCAGAAAGAACCCAGGTCTCTaGAGAATGAAAAAGCACTACATCACATCACCTTCACCTGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: KVLPFSLYCRKNPGL*RMKKHYITSPSPGP Trigger: TGGCCCAGGTGAAGGTGATGTGATGTAGTGCTTTTTCATTCTCAAGAGACCTGGGTTCTTTCTGCAATAAAGGGAAAAGGGAAGAACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR TCA 90 bp | CACAGTATTGTCACATCTAGTATCTCTGAGGTAGGTGGGGAAGATATAAATAAATTACTTCTTCCACGGTaGCGTGCCTCTGGAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HSIVTSSISEVGGEDINKLLLPR*RASGAP Trigger: AGGAGCTCCAGAGGCACGTCACCGTGGAAGAAGTAA...TTTATTTATATCTTCCCCACCTACCTCAGAGATACTAGATGTGACAATACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| 3UTR-3UTR CCA 90 bp | ACACTGAACAGGGCTCATCTGTTAGAAGACTACAGAAATGCCTGTGTGACTTCTGCCAGGTCTAAAATCTaGGTTTCAGTAGGTGACTCA | + |
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Preference number: 2 (lower is better) Translates to: TLNRAHLLEDYRNACVTSARSKI*VSVGDS Trigger: TGAGTCACCTACTGAAACCCAGATTTTAGACCTGGC...AGAAGTCACACAGGCATTTCTGTAGTCTTCTAACAGATGAGCCCTGTTCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR TCA 90 bp | CATCACATCACCTTCACCTGGGCCATTCAGAGATTTGATTCCCACAAAATCAAAACAATCTATGACATCTaGATTTCTCTGAGACACTGC | + |
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Preference number: 2 (lower is better) Translates to: HHITFTWAIQRFDSHKIKTIYDI*ISLRHC Trigger: GCAGTGTCTCAGAGAAATTCAGATGTCATAGATTGT...TTTGATTTTGTGGGAATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR CCA 90 bp | CATTTTATTCTTAGAAGGTTCTTCCCTTTTCCCTTTATTGCAGAAAGAACCCAGGTGGCTCAGAGCTCATaGTATGTCCTTAGTTTCATG | + |
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Preference number: 2 (lower is better) Translates to: HFILRRFFPFPFIAERTQVAQSS*YVLSFM Trigger: CATGAAACTAAGGACATACCATGAGCTCTGAGCCAC...CTGGGTTCTTTCTGCAATAAAGGGAAAAGGGAAGAACCTTCTAAGAATAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR TCA 90 bp | CTGAATTTCTCTGAGACACTGCTGTCAATAGCAGTGCTAATGTTTTATATAGCAATGTCCTTAGTTTCATaGTCAGTGAATGACAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LNFSETLLSIAVLMFYIAMSLVS*SVNDRP Trigger: TGGCCTGTCATTCACTGATCATGAAACTAAGGACAT...TGCTATATAAAACATTAGCACTGCTATTGACAGCAGTGTCTCAGAGAAATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| 3UTR-3UTR TCA 90 bp | CTGAATTTCTCTGAGACACTGCTGTCAATAGCAGTGCTAATGTTTTATATAGCAACATCTGAATTTCTCTaGGACACTGCTGTCAATAGC | + |
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Preference number: 2 (lower is better) Translates to: LNFSETLLSIAVLMFYIATSEFL*DTAVNS Trigger: GCTATTGACAGCAGTGTCTCAGAGAAATTCAGATGT...TGCTATATAAAACATTAGCACTGCTATTGACAGCAGTGTCTCAGAGAAATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| 3UTR-3UTR TCA 90 bp | CATTTTATTCTTAGAAGGTTCTTCCCTTTTCCCTTTATTGCAGAAAGAACCCAGGGCCATTCAGAGATTTaGTTCCCACAAAATCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HFILRRFFPFPFIAERTQGHSEI*FPQNQR Trigger: CCTTTGATTTTGTGGGAATCAAATCTCTGAATGGCC...CTGGGTTCTTTCTGCAATAAAGGGAAAAGGGAAGAACCTTCTAAGAATAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR GCA 72 bp | CTCTTGTCAGCAACCATAACCAACCACGCAAGTGAATaGACCATATGGAGCGCTGATCCTCCAGCCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LLSATITNHASE*TIWSADPPAQP Trigger: TGGCTGGGCTGGAGGATCAGCGCTCCATATGGTGCATTCACTTGCGTGGTTGGTTATGGTTGCTGACAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR TCA 72 bp | AAGCAACCCTATAGGGAGGTCCACACGGTAAGGAACTaGGGCCTCTTGTCAGCAACCATAACCAACCACGCA | + |
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Preference number: 3 (lower is better) Translates to: KQPYREVHTVRN*GLLSATITNHA Trigger: TGCGTGGTTGGTTATGGTTGCTGACAAGAGGCCTCAGTTCCTTACCGTGTGGACCTCCCTATAGGGTTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR TCA 72 bp | TTCATGCTTCCCAAGGCAGGAGCATCCTGGCTGTTATaGGTACTCTTCAGTTGGGGCTGTCCTCTGAGATCA | + |
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Preference number: 3 (lower is better) Translates to: FMLPKAGASWLL*VLFSWGCPLRS Trigger: TGATCTCAGAGGACAGCCCCAACTGAAGAGTACTCATAACAGCCAGGATGCTCCTGCCTTGGGAAGCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| 3UTR GCA 72 bp | ATTGTGGCTTCCAGCTTGTCTCTCTTTGGCATGACTTaGTCTAGGGGAAGCCAGTTGCCCTGTCATGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: IVASSLSLFGMT*SRGSQLPCHEN Trigger: GTTCTCATGACAGGGCAACTGGCTTCCCCTAGAGCAAGTCATGCCAAAGAGAGACAAGCTGGAAGCCACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR GCA 72 bp | TCTTCAAGATGGCCCCTAATAATCCTCACCTTCTGTTaGCCTAGTGCAGTCCCTTCCACACTGAACAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSRWPLIILTFC*PSAVPSTLNRA Trigger: AGCCCTGTTCAGTGTGGAAGGGACTGCACTAGGGCAACAGAAGGTGAGGATTATTAGGGGCCATCTTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR TCA 72 bp | ATATGGAGCGCTGATCCTCCAGCCCAGCCAAGCCTTTaGATAAGTGCAGTTCCAGCTGACATCTTAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: IWSADPPAQPSL*ISAVPADILTA Trigger: TGCAGTTAAGATGTCAGCTGGAACTGCACTTATTCAAAGGCTTGGCTGGGCTGGAGGATCAGCGCTCCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR TCA 72 bp | AAAACATTGTGGCTTCCAGCTTGTCTCTCTTTGGCATaGCTTGCTCTAGGGGAAGCCAGTTGCCCTGTCATG | + |
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Preference number: 3 (lower is better) Translates to: KTLWLPACLSLA*LALGEASCPVM Trigger: CATGACAGGGCAACTGGCTTCCCCTAGAGCAAGTCATGCCAAAGAGAGACAAGCTGGAAGCCACAATGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR TCA 72 bp | GGCTGTTATGAGTACTCTTCAGTTGGGGCTGTCCTCTaGGATCAGTGTGCACTTGTAGATCTCCTTAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: GCYEYSSVGAVL*DQCALVDLLKG Trigger: GCCTTTAAGGAGATCTACAAGTGCACACTGATCTCAGAGGACAGCCCCAACTGAAGAGTACTCATAACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| 3UTR CCA 72 bp | CCACTCTTAATAGGCTGTGGTGGCCATTCTTCAAGATaGCCCCTAATAATCCTCACCTTCTGTTGCCCTAGT | + |
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Preference number: 3 (lower is better) Translates to: PLLIGCGGHSSR*PLIILTFCCPS Trigger: ACTAGGGCAACAGAAGGTGAGGATTATTAGGGGCCATCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR CAA 90 bp | TGGCCCCTAATAATCCTCACCTTCTGTTGCCCTAGTGCAGTCCCTTCCACACTGCAGTTAGACACAGTATaGAGGAAGCAACAATTGAGA | + |
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Preference number: 3 (lower is better) Translates to: WPLIILTFCCPSAVPSTLQLDTV*RKQQLR Trigger: TCTCAATTGTTGCTTCCTCAATACTGTGTCTAACTG...CAGTGTGGAAGGGACTGCACTAGGGCAACAGAAGGTGAGGATTATTAGGGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR CAA 90 bp | CTTATCCTTCCTCCAGTCTTTGGCCTAGCTCAGGGTAACCCAACTAAAAACTGCTCCCTTTTCCCTTTATaGCAGAAAGAACCCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LILPPVFGLAQGNPTKNCSLFPL*QKEPRS Trigger: AGACCTGGGTTCTTTCTGCAATAAAGGGAAAAGGGA...GCAGTTTTTAGTTGGGTTACCCTGAGCTAGGCCAAAGACTGGAGGAAGGATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCATTCGAGGCTCTTTCCACTCTTAATAGGCTGTGGTGGCCATTCTTCAAGAGGGCCATTCAGAGATTaGATTCCCACAAAATCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SHSRLFPLLIGCGGHSSRGPFRD*IPTKSK Trigger: CTTTGATTTTGTGGGAATCAAATCTCTGAATGGCCC...TCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGGAAAGAGCCTCGAATGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCATTCGAGGCTCTTTCCACTCTTAATAGGCTGTGGTGGCCATTCTTCAAGAAAGAACCCAGGTCTCTaGAGAATGAAAAAGCACTAC | + |
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Preference number: 3 (lower is better) Translates to: SHSRLFPLLIGCGGHSSRKNPGL*RMKKHY Trigger: GTAGTGCTTTTTCATTCTCAAGAGACCTGGGTTCTT...TCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGGAAAGAGCCTCGAATGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCATTCGAGGCTCTTTCCACTCTTAATAGGCTGTGGTGGCCATTCTTCAAGAAACTCACTTCTATCTTaGGCATTTGTACAGTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: SHSRLFPLLIGCGGHSSRNSLLS*AFVQCE Trigger: CTCACACTGTACAAATGCCAAAGATAGAAGTGAGTT...TCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGGAAAGAGCCTCGAATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR TCA 72 bp | AGCTCATGGTATGTCCTTAGTTTCATGATCAGTGAATaGCAGGCCAGGTCTAAAATCTGGGTTTCAGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: SSWYVLSFMISE*QARSKIWVSVG Trigger: ACCTACTGAAACCCAGATTTTAGACCTGGCCTGTCATTCACTGATCATGAAACTAAGGACATACCATGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| 3UTR CCA 72 bp | GAGAATGAAAAAGCACTACATCACATCACCTTCACCTaGGCCATTCAGAGATTTGATTCCCACAAAATCAAA | + |
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Preference number: 3 (lower is better) Translates to: ENEKALHHITFT*AIQRFDSHKIK Trigger: TTTGATTTTGTGGGAATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTGATGTAGTGCTTTTTCATTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| 3UTR-3UTR CAA 90 bp | ATGAAAAAGCACTACATCACATCACCTTCACCTGGGCCATTCAGAGATTTGATTTTGCTTTTCACAGTATaGTCACATCTAGTATCTCTG | + |
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Preference number: 3 (lower is better) Translates to: MKKHYITSPSPGPFRDLILLFTV*SHLVSL Trigger: CAGAGATACTAGATGTGACAATACTGTGAAAAGCAA...AATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTGATGTAGTGCTTTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR GCA 90 bp | CCAACCACGCAAGTGAATGCACCATATGGAGCGCTGATCCTCCAGCCCAGCCAACGCAGCCAGCGGTCCTaGAGCCCCAGTAGCTCGGCG | + |
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Preference number: 4 (lower is better) Translates to: PTTQVNAPYGALILQPSQRSQRS*SPSSSA Trigger: CGCCGAGCTACTGGGGCTGCAGGACCGCTGGCTGCG...TTGGCTGGGCTGGAGGATCAGCGCTCCATATGGTGCATTCACTTGCGTGGTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR GCA 90 bp | TCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACGTGCCTCTCTCAGGTACCGCCCTaGTCCGCGGCGCTCACCGAT | + |
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Preference number: 4 (lower is better) Translates to: SLKATRKGGITSSTVTCLSQVPP*SAALTD Trigger: ATCGGTGAGCGCCGCGGAGCAGGGCGGTACCTGAGA...GAGGCACGTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS-3UTR TCA 90 bp | ACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACGTGCCTCTGGAGCTCCTTACCAGGCCGTGGGATGTaGTGTGCCTTCCACAGCGGA | + |
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Preference number: 4 (lower is better) Translates to: TRKGGITSSTVTCLWSSLPGRGM*CAFHSG Trigger: TCCGCTGTGGAAGGCACATCACATCCCACGGCCTGG...TAAGGAGCTCCAGAGGCACGTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS-3UTR CCA 90 bp | ACTAGAGCCCAGAATTGCTCAGTTAGACACAGTATTGAGGAAGCAACAATTGAGCGGGGCCTCAATGCCTaGCTCGGCCTGCAGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: TRAQNCSVRHSIEEATIERGLNA*LGLQPP Trigger: CGGCGGCTGCAGGCCGAGCCAGGCATTGAGGCCCCG...CTCAATTGTTGCTTCCTCAATACTGTGTCTAACTGAGCAATTCTGGGCTCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR TCA 90 bp | TCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACGTGCCTCCCTTACTCAAGGAAGTaGCGCCTGTCCCAACCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLKATRKGGITSSTVTCLPYSRK*RLSQPV Trigger: GACTGGTTGGGACAGGCGTCACTTCCTTGAGTAAGG...GAGGCACGTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS-3UTR GCA 90 bp | TTCTTAGAAGGTTCTTCCCTTTTCCCTTTATTGCAGAAAGAACCCAGGTCTCTTCCGACGGGGCCTCAATaGCTGGCTCGGCCTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FLEGSSLFPLLQKEPRSLPTGPQ*LARPAA Trigger: GGCTGCAGGCCGAGCCAGGCATTGAGGCCCCGTCGG...AAGAGACCTGGGTTCTTTCTGCAATAAAGGGAAAAGGGAAGAACCTTCTAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR GCA 90 bp | ATCTGGGTTTCAGTAGGTGACTCAAGTCAGACTTCATGCTTCCCAAGGCAGGAGCGATCGCGCAGATCTTaGGATCGTCTAGCCAGACGC | + |
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Preference number: 4 (lower is better) Translates to: IWVSVGDSSQTSCFPRQERSRRS*DRLARR Trigger: GCGTCTGGCTAGACGATCGCAAGATCTGCGCGATCG...CTCCTGCCTTGGGAAGCATGAAGTCTGACTTGAGTCACCTACTGAAACCCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| CDS-3UTR CCA 90 bp | ACTAGAGCCCAGAATTGCTCAGTTAGACACAGTATTGAGGAAGCAACAATTGAGGGGTGGCAAAGCAGCTaGCCCGGGCCGTGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TRAQNCSVRHSIEEATIEGWQSS*PGPWKV Trigger: CACCTTCCACGGCCCGGGCCAGCTGCTTTGCCACCC...CTCAATTGTTGCTTCCTCAATACTGTGTCTAACTGAGCAATTCTGGGCTCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CCA 90 bp | ATGAAAAAGCACTACATCACATCACCTTCACCTGGGCCATTCAGAGATTTGATTGCGTCCTGCAGGCCCTaGAGCTCGCACAGGCGCACG | + |
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Preference number: 4 (lower is better) Translates to: MKKHYITSPSPGPFRDLIASCRP*SSHRRT Trigger: CGTGCGCCTGTGCGAGCTCCAGGGCCTGCAGGACGC...AATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTGATGTAGTGCTTTTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR TCA 90 bp | TCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACGTGCCTCGCATCCTGGCTGTTATaGGTACTCTTCAGTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLKATRKGGITSSTVTCLASWLL*VLFSWG Trigger: GCCCCAACTGAAGAGTACTCATAACAGCCAGGATGC...GAGGCACGTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS-3UTR GCA 90 bp | CATTTTATTCTTAGAAGGTTCTTCCCTTTTCCCTTTATTGCAGAAAGAACCCAGATGCCTGGCTCGGCCTaGAGCCGCCGCAGCCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: HFILRRFFPFPFIAERTQMPGSA*SRRSQR Trigger: CCGCTGGCTGCGGCGGCTGCAGGCCGAGCCAGGCAT...CTGGGTTCTTTCTGCAATAAAGGGAAAAGGGAAGAACCTTCTAAGAATAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR GCA 90 bp | GTAGATCTCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACCCACAGGGCACGATGTaGTCAAACCACGTGAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: VDLLKGHKERWHYFFHGDPQGTM*SNHVRS Trigger: CGACCTCACGTGGTTTGAGCACATCGTGCCCTGTGG...GTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGAGATCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS-3UTR GCA 90 bp | CATCACATCACCTTCACCTGGGCCATTCAGAGATTTGATTCCCACAAAATCAAAAACCGAACGGCGGGTTaGCGCATCGTGCCCACCGTT | + |
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Preference number: 4 (lower is better) Translates to: HHITFTWAIQRFDSHKIKNRTAG*RIVPTV Trigger: AACGGTGGGCACGATGCGGCAACCCGCCGTTCGGTT...TTTGATTTTGTGGGAATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR GCA 90 bp | ACACTGAACAGGGCTCATCTGTTAGAAGACTACAGAAATGCCTGTGTGACTTCTCCGTGGGATGTGATGTaGCTTCCACAGCGGACTCCG | + |
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Preference number: 4 (lower is better) Translates to: TLNRAHLLEDYRNACVTSPWDVM*LPQRTP Trigger: CGGAGTCCGCTGTGGAAGGCACATCACATCCCACGG...AGAAGTCACACAGGCATTTCTGTAGTCTTCTAACAGATGAGCCCTGTTCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CCA 90 bp | ATGAAAAAGCACTACATCACATCACCTTCACCTGGGCCATTCAGAGATTTGATTAGGTCGAGTACCGGGTaGCAAAGCAGCTGGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: MKKHYITSPSPGPFRDLIRSSTG*QSSWPG Trigger: CCCGGGCCAGCTGCTTTGCCACCCGGTACTCGACCT...AATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTGATGTAGTGCTTTTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR CCA 90 bp | TGGCCCCTAATAATCCTCACCTTCTGTTGCCCTAGTGCAGTCCCTTCCACACTGCTTAATAGGCTGTGGTaGCCATTCTTCAAGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WPLIILTFCCPSAVPSTLLNRLW*PFFKMA Trigger: GGCCATCTTGAAGAATGGCCACCACAGCCTATTAAG...CAGTGTGGAAGGGACTGCACTAGGGCAACAGAAGGTGAGGATTATTAGGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | TCTCATTCGAGGCTCTTTCCACTCTTAATAGGCTGTGGTGGCCATTCTTCAAGACCTTACTCAAGGAAGTaGCGCCTGTCCCAACCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSRLFPLLIGCGGHSSRPYSRK*RLSQPV Trigger: GACTGGTTGGGACAGGCGTCACTTCCTTGAGTAAGG...TCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGGAAAGAGCCTCGAATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | TCTCATTCGAGGCTCTTTCCACTCTTAATAGGCTGTGGTGGCCATTCTTCAAGACACACGGTAAGGAACTaGGGCCTCTTGTCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SHSRLFPLLIGCGGHSSRHTVRN*GLLSAT Trigger: GGTTGCTGACAAGAGGCCTCAGTTCCTTACCGTGTG...TCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGGAAAGAGCCTCGAATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | TGGGTTTCAGTAGGTGACTCAAGTCAGACTTCATGCTTCCCAAGGCAGGAGCATACAGAAATGCCTGTGTaGCTTCTGAGGCTGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVSVGDSSQTSCFPRQEHTEMPV*LLRLGH Trigger: ATGACCCAGCCTCAGAAGTCACACAGGCATTTCTGT...ATGCTCCTGCCTTGGGAAGCATGAAGTCTGACTTGAGTCACCTACTGAAACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR GCA 90 bp | ACACTGAACAGGGCTCATCTGTTAGAAGACTACAGAAATGCCTGTGTGACTTCTCCACAGGGCACGATGTaGTCAAACCACGTGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TLNRAHLLEDYRNACVTSPQGTM*SNHVRS Trigger: CGACCTCACGTGGTTTGAGCACATCGTGCCCTGTGG...AGAAGTCACACAGGCATTTCTGTAGTCTTCTAACAGATGAGCCCTGTTCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR CCA 90 bp | TCTCATTCGAGGCTCTTTCCACTCTTAATAGGCTGTGGTGGCCATTCTTCAAGATTGAGAGCCAGGCCGTaGGATGTGATGTGCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHSRLFPLLIGCGGHSSRLRARP*DVMCLP Trigger: TGGAAGGCACATCACATCCCACGGCCTGGCTCTCAA...TCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGGAAAGAGCCTCGAATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR CCA 90 bp | GTAGATCTCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACACGGTGACGTGCCTCTaGAGCTCCTTACTCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VDLLKGHKERWHYFFHGDTVTCL*SSLLKE Trigger: TTCCTTGAGTAAGGAGCTCCAGAGGCACGTCACCGT...GTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGAGATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
||
| CDS-3UTR CCA 90 bp | TGGCCCCTAATAATCCTCACCTTCTGTTGCCCTAGTGCAGTCCCTTCCACACTGCACATCACCTTCACCTaGGCCATTCAGAGATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WPLIILTFCCPSAVPSTLHITFT*AIQRFD Trigger: ATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTG...CAGTGTGGAAGGGACTGCACTAGGGCAACAGAAGGTGAGGATTATTAGGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | CCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCTCACCATATGGAGCGCTaGTCCTCCAGCCCAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFRDLIPTKSKELEPRIAHHMER*SSSPAK Trigger: CTTGGCTGGGCTGGAGGATCAGCGCTCCATATGGTG...AGCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | CTGAATTTCTCTGAGACACTGCTGTCAATAGCAGTGCTAATGTTTTATATAGCACCAGGCCGTGGGATGTaGTGTGCCTTCCACAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNFSETLLSIAVLMFYIAPGRGM*CAFHSG Trigger: TCCGCTGTGGAAGGCACATCACATCCCACGGCCTGG...TGCTATATAAAACATTAGCACTGCTATTGACAGCAGTGTCTCAGAGAAATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS-3UTR GCA 90 bp | CCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCTCCGTGGGATGTGATGTaGCTTCCACAGCGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFRDLIPTKSKELEPRIAPWDVM*LPQRTP Trigger: AGGAGTCCGCTGTGGAAGGCACATCACATCCCACGG...AGCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
||
| CDS-3UTR CCA 90 bp | ACACTGAACAGGGCTCATCTGTTAGAAGACTACAGAAATGCCTGTGTGACTTCTACGGTGACGTGCCTCTaGAGCTCCTTACTCAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLNRAHLLEDYRNACVTSTVTCL*SSLLKE Trigger: TTCCTTGAGTAAGGAGCTCCAGAGGCACGTCACCGT...AGAAGTCACACAGGCATTTCTGTAGTCTTCTAACAGATGAGCCCTGTTCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTTTCAGTAGGTGACTCAAGTCAGACTTCATGCTTCCCAAGGCAGGAGGTGGCTCAGAGCTCATaGTATGTCCTTAGTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: IWVSVGDSSQTSCFPRQEVAQSS*YVLSFM Trigger: CATGAAACTAAGGACATACCATGAGCTCTGAGCCAC...CTCCTGCCTTGGGAAGCATGAAGTCTGACTTGAGTCACCTACTGAAACCCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS-3UTR TCA 90 bp | ACTAGAGCCCAGAATTGCTCAGTTAGACACAGTATTGAGGAAGCAACAATTGAGGTTGGGGCTGTCCTCTaGGATCAGTGTGCACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRAQNCSVRHSIEEATIEVGAVL*DQCALV Trigger: TACAAGTGCACACTGATCTCAGAGGACAGCCCCAAC...CTCAATTGTTGCTTCCTCAATACTGTGTCTAACTGAGCAATTCTGGGCTCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS-3UTR TCA 90 bp | AGACTTCATGCTTCCCAAGGCAGGAGCATCCTGGCTGTTATGAGTACTCTTCAGACATCTGAATTTCTCTaGGACACTGCTGTCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLHASQGRSILAVMSTLQTSEFL*DTAVNS Trigger: GCTATTGACAGCAGTGTCTCAGAGAAATTCAGATGT...CTGAAGAGTACTCATAACAGCCAGGATGCTCCTGCCTTGGGAAGCATGAAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
||
| CDS-3UTR GCA 90 bp | ACACTGAACAGGGCTCATCTGTTAGAAGACTACAGAAATGCCTGTGTGACTTCTCTAGGGGAAGCCAGTTaGCCTGTCATGAGAACAATT | + |
|
Preference number: 4 (lower is better) Translates to: TLNRAHLLEDYRNACVTSLGEAS*PVMRTI Trigger: AATTGTTCTCATGACAGGGCAACTGGCTTCCCCTAG...AGAAGTCACACAGGCATTTCTGTAGTCTTCTAACAGATGAGCCCTGTTCAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGCACTTGTAGATCTCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCGTGGCTCAGAGCTCATaGTATGTCCTTAGTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QCALVDLLKGHKERWHYFVAQSS*YVLSFM Trigger: CATGAAACTAAGGACATACCATGAGCTCTGAGCCAC...GAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGAGATCTACAAGTGCACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
||
| CDS-3UTR TCA 90 bp | CATTTTATTCTTAGAAGGTTCTTCCCTTTTCCCTTTATTGCAGAAAGAACCCAGTTACTTCTTCCACGGTaGCGTGCCTCTGGAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HFILRRFFPFPFIAERTQLLLPR*RASGAP Trigger: AGGAGCTCCAGAGGCACGTCACCGTGGAAGAAGTAA...CTGGGTTCTTTCTGCAATAAAGGGAAAAGGGAAGAACCTTCTAAGAATAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | TCTCATTCGAGGCTCTTTCCACTCTTAATAGGCTGTGGTGGCCATTCTTCAAGAATGTCCTTAGTTTCATaGTCAGTGAATGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHSRLFPLLIGCGGHSSRMSLVS*SVNDRP Trigger: TGGCCTGTCATTCACTGATCATGAAACTAAGGACAT...TCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGGAAAGAGCCTCGAATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGCACTTGTAGATCTCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCATGTCCTTAGTTTCATaGTCAGTGAATGACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCALVDLLKGHKERWHYFMSLVS*SVNDRP Trigger: TGGCCTGTCATTCACTGATCATGAAACTAAGGACAT...GAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGAGATCTACAAGTGCACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
||
| CDS-3UTR TCA 90 bp | GTAGATCTCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACACAATCTATGACATCTaGATTTCTCTGAGACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VDLLKGHKERWHYFFHGDTIYDI*ISLRHC Trigger: GCAGTGTCTCAGAGAAATTCAGATGTCATAGATTGT...GTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGAGATCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGTTTCAGTAGGTGACTCAAGTCAGACTTCATGCTTCCCAAGGCAGGAGACTCACTTCTATCTTTaGCATTTGTACAGTGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWVSVGDSSQTSCFPRQETHFYL*HLYSVR Trigger: TCTCACACTGTACAAATGCCAAAGATAGAAGTGAGT...CTCCTGCCTTGGGAAGCATGAAGTCTGACTTGAGTCACCTACTGAAACCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGTAGGTGACTCAAGTCAGACTTCATGCTTCCCAAGGCAGGAGCATCCTTCTATTGAACAGCACTaGTTTAAGGAGAAACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSVGDSSQTSCFPRQEHPSIEQH*FKEKLK Trigger: CTTCAGTTTCTCCTTAAACCAGTGCTGTTCAATAGA...AGGATGCTCCTGCCTTGGGAAGCATGAAGTCTGACTTGAGTCACCTACTGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| 3UTR CAA 72 bp | TACATCACATCACCTTCACCTGGGCCATTCAGAGATTaGATTCCCACAAAATCAAAGGAACTAGAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YITSPSPGPFRD*IPTKSKELEPR Trigger: TCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTGATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | CATTTTATTCTTAGAAGGTTCTTCCCTTTTCCCTTTATTGCAGAAAGAACCCAGGTTGGGGCTGTCCTCTaGGATCAGTGTGCACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HFILRRFFPFPFIAERTQVGAVL*DQCALV Trigger: TACAAGTGCACACTGATCTCAGAGGACAGCCCCAAC...CTGGGTTCTTTCTGCAATAAAGGGAAAAGGGAAGAACCTTCTAAGAATAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | CTGAATTTCTCTGAGACACTGCTGTCAATAGCAGTGCTAATGTTTTATATAGCAGCATCCTGGCTGTTATaGGTACTCTTCAGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LNFSETLLSIAVLMFYIAASWLL*VLFSWG Trigger: GCCCCAACTGAAGAGTACTCATAACAGCCAGGATGC...TGCTATATAAAACATTAGCACTGCTATTGACAGCAGTGTCTCAGAGAAATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS-3UTR CCA 90 bp | ACTAGAGCCCAGAATTGCTCAGTTAGACACAGTATTGAGGAAGCAACAATTGAGGCCAGGTCTAAAATCTaGGTTTCAGTAGGTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRAQNCSVRHSIEEATIEARSKI*VSVGDS Trigger: TGAGTCACCTACTGAAACCCAGATTTTAGACCTGGC...CTCAATTGTTGCTTCCTCAATACTGTGTCTAACTGAGCAATTCTGGGCTCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS-3UTR TCA 90 bp | ACTAGAGCCCAGAATTGCTCAGTTAGACACAGTATTGAGGAAGCAACAATTGAGGGCCATTCAGAGATTTaGTTCCCACAAAATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRAQNCSVRHSIEEATIEGHSEI*FPQNQR Trigger: CCTTTGATTTTGTGGGAATCAAATCTCTGAATGGCC...CTCAATTGTTGCTTCCTCAATACTGTGTCTAACTGAGCAATTCTGGGCTCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS-3UTR TCA 90 bp | GCCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCGGCCATTCAGAGATTTaGTTCCCACAAAATCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIQRFDSHKIKGTRAQNCGHSEI*FPQNQR Trigger: CCTTTGATTTTGTGGGAATCAAATCTCTGAATGGCC...GCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS-3UTR GCA 90 bp | CTGAATTTCTCTGAGACACTGCTGTCAATAGCAGTGCTAATGTTTTATATAGCACTCTTTGGCATGACTTaGTCTAGGGGAAGCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNFSETLLSIAVLMFYIALFGMT*SRGSQL Trigger: CAACTGGCTTCCCCTAGAGCAAGTCATGCCAAAGAG...TGCTATATAAAACATTAGCACTGCTATTGACAGCAGTGTCTCAGAGAAATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR CCA 90 bp | CCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCTGCCAGGTCTAAAATCTaGGTTTCAGTAGGTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFRDLIPTKSKELEPRIAARSKI*VSVGDS Trigger: TGAGTCACCTACTGAAACCCAGATTTTAGACCTGGC...AGCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS-3UTR CCA 90 bp | GCCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCACTCTTAATAGGCTGTaGTGGCCATTCTTCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AIQRFDSHKIKGTRAQNCTLNRL*WPFFKM Trigger: CATCTTGAAGAATGGCCACCACAGCCTATTAAGAGT...GCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| 3UTR CAA 72 bp | CCCTTTTCCCTTTATTGCAGAAAGAACCCAGGTCTCTaGAGAATGAAAAAGCACTACATCACATCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFSLYCRKNPGL*RMKKHYITSPS Trigger: TGAAGGTGATGTGATGTAGTGCTTTTTCATTCTCAAGAGACCTGGGTTCTTTCTGCAATAAAGGGAAAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | CATTTTATTCTTAGAAGGTTCTTCCCTTTTCCCTTTATTGCAGAAAGAACCCAGCTTCCCCCAAATTCCTaGCCCACAAACGAGATAATT | + |
|
Preference number: 4 (lower is better) Translates to: HFILRRFFPFPFIAERTQLPPNS*PTNEII Trigger: AATTATCTCGTTTGTGGGTCAGGAATTTGGGGGAAG...CTGGGTTCTTTCTGCAATAAAGGGAAAAGGGAAGAACCTTCTAAGAATAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | CACAGTATTGTCACATCTAGTATCTCTGAGGTAGGTGGGGAAGATATAAATAAAAAGTGCAGTTCCAGCTaGCATCTTAACTGCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HSIVTSSISEVGGEDINKKCSSS*HLNCKF Trigger: GAACTTGCAGTTAAGATGTCAGCTGGAACTGCACTT...TTTATTTATATCTTCCCCACCTACCTCAGAGATACTAGATGTGACAATACTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | CATTTTATTCTTAGAAGGTTCTTCCCTTTTCCCTTTATTGCAGAAAGAACCCAGACATCTGAATTTCTCTaGGACACTGCTGTCAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: HFILRRFFPFPFIAERTQTSEFL*DTAVNS Trigger: GCTATTGACAGCAGTGTCTCAGAGAAATTCAGATGT...CTGGGTTCTTTCTGCAATAAAGGGAAAAGGGAAGAACCTTCTAAGAATAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR CCA 90 bp | CCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCTCTAAATTATCAAACTTaGGGAATCAAACCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PFRDLIPTKSKELEPRIALNYQT*GIKPRK Trigger: CTTCCTGGGTTTGATTCCCCAAGTTTGATAATTTAG...AGCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS-3UTR TCA 90 bp | CACAGTATTGTCACATCTAGTATCTCTGAGGTAGGTGGGGAAGATATAAATAAAACAATCTATGACATCTaGATTTCTCTGAGACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSIVTSSISEVGGEDINKTIYDI*ISLRHC Trigger: GCAGTGTCTCAGAGAAATTCAGATGTCATAGATTGT...TTTATTTATATCTTCCCCACCTACCTCAGAGATACTAGATGTGACAATACTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS GCA 90 bp | CGCAGAGCAGGAGCGCGCCCGCCTCAGTCCCCGACGGGGCCTCAATaGCTGGCTCGGCCTGCAGCCGCCGCAGCCAGCGGTCCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRAGARPPQSPTGPQ*LARPAAAAASGPAA Trigger: GGCTGCAGGACCGCTGGCTGCGGCGGCTGCAGGCCGAGCCAGGCATTGAGGCCCCGTCGGGGACTGAGGCGGGCGCGCTCCTGCTCTGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000528085.1 |
||
| CDS CCA 90 bp | CGCAGGCCGAGACGCCGCAGGTCGAGTACCGGGTGGCAAAGCAGCTaGCCCGGGCCGTGGAAGGTGGCCAGGCCACCGCGGCCTGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: RRPRRRRSSTGWQSS*PGPWKVARPPRPVT Trigger: CGTCACAGGCCGCGGTGGCCTGGCCACCTTCCACGGCCCGGGCCAGCTGCTTTGCCACCCGGTACTCGACCTGCGGCGTCTCGGCCTGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS GCA 90 bp | GCTCGCACAGGCGCACGGCGCACGCCTCCAGCGACGCTACGTGCATaGGCAAGCGCAGGCCGAGACGCCGCAGGTCGAGTACCGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARTGARRTPPATLRA*ASAGRDAAGRVPGG Trigger: GCCACCCGGTACTCGACCTGCGGCGTCTCGGCCTGCGCTTGCGCATGCACGTAGCGTCGCTGGAGGCGTGCGCCGTGCGCCTGTGCGAGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS GCA 90 bp | TGGAGCTCGCACAGGCGCACGGCGCACGCCTCCAGCGACGCTACGTaGATGCGCAAGCGCAGGCCGAGACGCCGCAGGTCGAGTACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: WSSHRRTAHASSDAT*MRKRRPRRRRSSTG Trigger: CCCGGTACTCGACCTGCGGCGTCTCGGCCTGCGCTTGCGCATGCACGTAGCGTCGCTGGAGGCGTGCGCCGTGCGCCTGTGCGAGCTCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
||
| CDS GCA 90 bp | TCAGGTACCGCCCTGCTCCGCGGCGCTCACCGATCGCGCAGATCTTaGGATCGTCTAGCCAGACGCCAGTGTAGGGCGGGGGCCGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SGTALLRGAHRSRRS*DRLARRQCRAGAAR Trigger: GCGCGCGGCCCCCGCCCTACACTGGCGTCTGGCTAGACGATCGCAAGATCTGCGCGATCGGTGAGCGCCGCGGAGCAGGGCGGTACCTGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527115.1 |
||
| CDS GCA 90 bp | CTCAAGGAAGTGACGCCTGTCCCAACCAGTCCACAGGGCACGATGTaGTCAAACCACGTGAGGTCGGTAGAGCAGTTGAGAGCCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LKEVTPVPTSPQGTM*SNHVRSVEQLRARP Trigger: CGGCCTGGCTCTCAACTGCTCTACCGACCTCACGTGGTTTGAGCACATCGTGCCCTGTGGACTGGTTGGGACAGGCGTCACTTCCTTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
||
| CDS CCA 90 bp | TGCTCAAACCACGTGAGGTCGGTAGAGCAGTTGAGAGCCAGGCCGTaGGATGTGATGTGCCTTCCACAGCGGACTCCGATCGCGCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: CSNHVRSVEQLRARP*DVMCLPQRTPIAQI Trigger: GATCTGCGCGATCGGAGTCCGCTGTGGAAGGCACATCACATCCCACGGCCTGGCTCTCAACTGCTCTACCGACCTCACGTGGTTTGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS CCA 90 bp | TGCTCAAACCACGTGAGGTCGGTAGAGCAGTTGAGAGCCAGGCCGTaGGATGTGATGTGCCTTCCACAGCGGACTCCTCGGCTCTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: CSNHVRSVEQLRARP*DVMCLPQRTPRLSG Trigger: ACCTGAGAGCCGAGGAGTCCGCTGTGGAAGGCACATCACATCCCACGGCCTGGCTCTCAACTGCTCTACCGACCTCACGTGGTTTGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS CCA 90 bp | GCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACGTGCCTCTaGAGCTCCTTACTCAAGGAAGTGACGCCTGTCCCAACCAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: ATRKGGITSSTVTCL*SSLLKEVTPVPTSP Trigger: TGGACTGGTTGGGACAGGCGTCACTTCCTTGAGTAAGGAGCTCCAGAGGCACGTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| CDS-3UTR CAA 90 bp | TCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACGTGCCTCAGGTCGGTAGAGCAGTaGAGAGCCAGGCCGTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: SLKATRKGGITSSTVTCLRSVEQ*RARPWD Trigger: ATCCCACGGCCTGGCTCTCAACTGCTCTACCGACCT...GAGGCACGTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS GCA 90 bp | TTAAAGGCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACGTaGCTCTGGAGCTCCTTACTCAAGGAAGTGACGCCTGTCCCAACC | + |
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Preference number: 5 (lower is better) Translates to: LKATRKGGITSSTVT*LWSSLLKEVTPVPT Trigger: GGTTGGGACAGGCGTCACTTCCTTGAGTAAGGAGCTCCAGAGGCACGTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGCCTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| CDS-3UTR CAA 90 bp | GCCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCCAACCGAACGGCGGGTaGCCGCATCGTGCCCACCGT | + |
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Preference number: 5 (lower is better) Translates to: AIQRFDSHKIKGTRAQNCQPNGG*PHRAHR Trigger: ACGGTGGGCACGATGCGGCAACCCGCCGTTCGGTTG...GCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CAA 90 bp | TGGCCCCTAATAATCCTCACCTTCTGTTGCCCTAGTGCAGTCCCTTCCACACTGATGAGTACTCTTCAGTaGGGGCTGTCCTCTGAGATC | + |
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Preference number: 5 (lower is better) Translates to: WPLIILTFCCPSAVPSTLMSTLQ*GLSSEI Trigger: GATCTCAGAGGACAGCCCCAACTGAAGAGTACTCAT...CAGTGTGGAAGGGACTGCACTAGGGCAACAGAAGGTGAGGATTATTAGGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CAA 90 bp | CATCACATCACCTTCACCTGGGCCATTCAGAGATTTGATTCCCACAAAATCAAAAGGTCGGTAGAGCAGTaGAGAGCCAGGCCGTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: HHITFTWAIQRFDSHKIKRSVEQ*RARPWD Trigger: ATCCCACGGCCTGGCTCTCAACTGCTCTACCGACCT...TTTGATTTTGTGGGAATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CAA 90 bp | CCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCTCCGATCGCGCAGATCTaGCGATCGTCTAGCCAGACG | + |
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Preference number: 5 (lower is better) Translates to: PFRDLIPTKSKELEPRIAPIAQI*RSSSQT Trigger: CGTCTGGCTAGACGATCGCAAGATCTGCGCGATCGG...AGCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| CDS-3UTR CAA 90 bp | CAGTGTGCACTTGTAGATCTCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCATGAGTACTCTTCAGTaGGGGCTGTCCTCTGAGATC | + |
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Preference number: 5 (lower is better) Translates to: QCALVDLLKGHKERWHYFMSTLQ*GLSSEI Trigger: GATCTCAGAGGACAGCCCCAACTGAAGAGTACTCAT...GAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGAGATCTACAAGTGCACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS-3UTR CAA 90 bp | TGCTTCCCAAGGCAGGAGCATCCTGGCTGTTATGAGTACTCTTCAGTTGGGGCTCAGTTAGACACAGTATaGAGGAAGCAACAATTGAGA | + |
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Preference number: 5 (lower is better) Translates to: CFPRQEHPGCYEYSSVGAQLDTV*RKQQLR Trigger: TCTCAATTGTTGCTTCCTCAATACTGTGTCTAACTG...AGCCCCAACTGAAGAGTACTCATAACAGCCAGGATGCTCCTGCCTTGGGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS-3UTR CAA 90 bp | TCTCATTCGAGGCTCTTTCCACTCTTAATAGGCTGTGGTGGCCATTCTTCAAGATCTAGGGGAAGCCAGTaGCCCTGTCATGAGAACAAT | + |
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Preference number: 5 (lower is better) Translates to: SHSRLFPLLIGCGGHSSRSRGSQ*PCHENN Trigger: ATTGTTCTCATGACAGGGCAACTGGCTTCCCCTAGA...TCTTGAAGAATGGCCACCACAGCCTATTAAGAGTGGAAAGAGCCTCGAATGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CAA 90 bp | CTGAATTTCTCTGAGACACTGCTGTCAATAGCAGTGCTAATGTTTTATATAGCACCGATCGCGCAGATCTaGCGATCGTCTAGCCAGACG | + |
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Preference number: 5 (lower is better) Translates to: LNFSETLLSIAVLMFYIAPIAQI*RSSSQT Trigger: CGTCTGGCTAGACGATCGCAAGATCTGCGCGATCGG...TGCTATATAAAACATTAGCACTGCTATTGACAGCAGTGTCTCAGAGAAATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| CDS-3UTR CAA 90 bp | TGCAGTCCCTTCCACACTGAACAGGGCTCATCTGTTAGAAGACTACAGAAATGCGGGCCATTCAGAGATTaGATTCCCACAAAATCAAAG | + |
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Preference number: 5 (lower is better) Translates to: CSPFHTEQGSSVRRLQKCGPFRD*IPTKSK Trigger: CTTTGATTTTGTGGGAATCAAATCTCTGAATGGCCC...GCATTTCTGTAGTCTTCTAACAGATGAGCCCTGTTCAGTGTGGAAGGGACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CAA 90 bp | GTAGATCTCCTTAAAGGCCACAAGGAAAGGTGGCATTACTTCTTCCACGGTGACGGGCCATTCAGAGATTaGATTCCCACAAAATCAAAG | + |
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Preference number: 5 (lower is better) Translates to: VDLLKGHKERWHYFFHGDGPFRD*IPTKSK Trigger: CTTTGATTTTGTGGGAATCAAATCTCTGAATGGCCC...GTCACCGTGGAAGAAGTAATGCCACCTTTCCTTGTGGCCTTTAAGGAGATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS-3UTR CAA 90 bp | CCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCTGAGTCTGAGACCAGCTaGGGCAACATAGCAAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PFRDLIPTKSKELEPRIAESETS*GNIAKP Trigger: AGGCTTTGCTATGTTGCCCAAGCTGGTCTCAGACTC...AGCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CAA 90 bp | ATCTGGGTTTCAGTAGGTGACTCAAGTCAGACTTCATGCTTCCCAAGGCAGGAGTTGCTTTTCACAGTATaGTCACATCTAGTATCTCTG | + |
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Preference number: 5 (lower is better) Translates to: IWVSVGDSSQTSCFPRQELLFTV*SHLVSL Trigger: CAGAGATACTAGATGTGACAATACTGTGAAAAGCAA...CTCCTGCCTTGGGAAGCATGAAGTCTGACTTGAGTCACCTACTGAAACCCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| CDS-3UTR CAA 90 bp | ACACTGAACAGGGCTCATCTGTTAGAAGACTACAGAAATGCCTGTGTGACTTCTTCCCTTTTCCCTTTATaGCAGAAAGAACCCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: TLNRAHLLEDYRNACVTSSLFPL*QKEPRS Trigger: AGACCTGGGTTCTTTCTGCAATAAAGGGAAAAGGGA...AGAAGTCACACAGGCATTTCTGTAGTCTTCTAACAGATGAGCCCTGTTCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CAA 90 bp | CTTATCCTTCCTCCAGTCTTTGGCCTAGCTCAGGGTAACCCAACTAAAAACTGCTTGCTTTTCACAGTATaGTCACATCTAGTATCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LILPPVFGLAQGNPTKNCLLFTV*SHLVSL Trigger: CAGAGATACTAGATGTGACAATACTGTGAAAAGCAA...GCAGTTTTTAGTTGGGTTACCCTGAGCTAGGCCAAAGACTGGAGGAAGGATAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CAA 90 bp | CATCACATCACCTTCACCTGGGCCATTCAGAGATTTGATTCCCACAAAATCAAAGCTAAATTATCAAACTaGGGGAATCAAACCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: HHITFTWAIQRFDSHKIKAKLSN*GNQTQE Trigger: TTCCTGGGTTTGATTCCCCAAGTTTGATAATTTAGC...TTTGATTTTGTGGGAATCAAATCTCTGAATGGCCCAGGTGAAGGTGATGTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS-3UTR CAA 90 bp | CCATTCAGAGATTTGATTCCCACAAAATCAAAGGAACTAGAGCCCAGAATTGCTCAGTTAGACACAGTATaGAGGAAGCAACAATTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PFRDLIPTKSKELEPRIAQLDTV*RKQQLR Trigger: TCTCAATTGTTGCTTCCTCAATACTGTGTCTAACTG...AGCAATTCTGGGCTCTAGTTCCTTTGATTTTGTGGGAATCAAATCTCTGAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| CDS-3UTR CAA 90 bp | CACAGTATTGTCACATCTAGTATCTCTGAGGTAGGTGGGGAAGATATAAATAAAAAGAACCCAGGTCTCTaGAGAATGAAAAAGCACTAC | + |
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Preference number: 5 (lower is better) Translates to: HSIVTSSISEVGGEDINKKNPGL*RMKKHY Trigger: GTAGTGCTTTTTCATTCTCAAGAGACCTGGGTTCTT...TTTATTTATATCTTCCCCACCTACCTCAGAGATACTAGATGTGACAATACTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS TCA 72 bp | CCGGGCCGTGGAAGGTGGCCAGGCCACCGCGGCCTGTaGCGCGCACCTCGGCGCCCAAGGCCCGTAGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: PGRGRWPGHRGL*RAPRRPRPVAA Trigger: CGCGGCTACGGGCCTTGGGCGCCGAGGTGCGCGTCACAGGCCGCGGTGGCCTGGCCACCTTCCACGGCCCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS CCA 72 bp | AGACGCCGCAGGTCGAGTACCGGGTGGCAAAGCAGCTaGCCCGGGCCGTGGAAGGTGGCCAGGCCACCGCGG | + |
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Preference number: 6 (lower is better) Translates to: RRRRSSTGWQSS*PGPWKVARPPR Trigger: CCGCGGTGGCCTGGCCACCTTCCACGGCCCGGGCCAGCTGCTTTGCCACCCGGTACTCGACCTGCGGCGTCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS GCA 72 bp | GGCGCACGGCGCACGCCTCCAGCGACGCTACGTGCATaGGCAAGCGCAGGCCGAGACGCCGCAGGTCGAGTA | + |
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Preference number: 6 (lower is better) Translates to: GARRTPPATLRA*ASAGRDAAGRV Trigger: TACTCGACCTGCGGCGTCTCGGCCTGCGCTTGCGCATGCACGTAGCGTCGCTGGAGGCGTGCGCCGTGCGCC 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS CCA 72 bp | AAGCGCAGGCCGAGACGCCGCAGGTCGAGTACCGGGTaGCAAAGCAGCTGGCCCGGGCCGTGGAAGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: KRRPRRRRSSTG*QSSWPGPWKVA Trigger: GGCCACCTTCCACGGCCCGGGCCAGCTGCTTTGCCACCCGGTACTCGACCTGCGGCGTCTCGGCCTGCGCTT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS GCA 72 bp | GCCCTGCTCCGCGGCGCTCACCGATCGCGCAGATCTTaGGATCGTCTAGCCAGACGCCAGTGTAGGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALLRGAHRSRRS*DRLARRQCRAG Trigger: CCCCGCCCTACACTGGCGTCTGGCTAGACGATCGCAAGATCTGCGCGATCGGTGAGCGCCGCGGAGCAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS GCA 72 bp | TTCCACAGCGGACTCCTCGGCTCTCAGGTACCGCCCTaGTCCGCGGCGCTCACCGATCGCGCAGATCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: FHSGLLGSQVPP*SAALTDRADLA Trigger: CGCAAGATCTGCGCGATCGGTGAGCGCCGCGGAGCAGGGCGGTACCTGAGAGCCGAGGAGTCCGCTGTGGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS GCA 72 bp | TGTGCCTTCCACAGCGGACTCCGATCGCGCAGATCTTaGGATCGTCTAGCCAGACGCCAGTGTAGGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: CAFHSGLRSRRS*DRLARRQCRAG Trigger: CCCCGCCCTACACTGGCGTCTGGCTAGACGATCGCAAGATCTGCGCGATCGGAGTCCGCTGTGGAAGGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS CCA 72 bp | CACGTGAGGTCGGTAGAGCAGTTGAGAGCCAGGCCGTaGGATGTGATGTGCCTTCCACAGCGGACTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: HVRSVEQLRARP*DVMCLPQRTPR Trigger: CCGAGGAGTCCGCTGTGGAAGGCACATCACATCCCACGGCCTGGCTCTCAACTGCTCTACCGACCTCACGTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS GCA 72 bp | GTAGAGCAGTTGAGAGCCAGGCCGTGGGATGTGATGTaGCTTCCACAGCGGACTCCTCGGCTCTCAGGTACC | + |
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Preference number: 6 (lower is better) Translates to: VEQLRARPWDVM*LPQRTPRLSGT Trigger: GGTACCTGAGAGCCGAGGAGTCCGCTGTGGAAGGCACATCACATCCCACGGCCTGGCTCTCAACTGCTCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527115.1 |
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| CDS CCA 72 bp | CACGTGAGGTCGGTAGAGCAGTTGAGAGCCAGGCCGTaGGATGTGATGTGCCTTCCACAGCGGACTCCGATC | + |
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Preference number: 6 (lower is better) Translates to: HVRSVEQLRARP*DVMCLPQRTPI Trigger: GATCGGAGTCCGCTGTGGAAGGCACATCACATCCCACGGCCTGGCTCTCAACTGCTCTACCGACCTCACGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS CAA 90 bp | CCACAGGGCACGATGTGCTCAAACCACGTGAGGTCGGTAGAGCAGTaGAGAGCCAGGCCGTGGGATGTGATGTGCCTTCCACAGCGGACT | + |
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Preference number: 6 (lower is better) Translates to: PQGTMCSNHVRSVEQ*RARPWDVMCLPQRT Trigger: AGTCCGCTGTGGAAGGCACATCACATCCCACGGCCTGGCTCTCAACTGCTCTACCGACCTCACGTGGTTTGAGCACATCGTGCCCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| CDS GCA 72 bp | GTAGAGCAGTTGAGAGCCAGGCCGTGGGATGTGATGTaGCTTCCACAGCGGACTCCGATCGCGCAGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: VEQLRARPWDVM*LPQRTPIAQIL Trigger: CAAGATCTGCGCGATCGGAGTCCGCTGTGGAAGGCACATCACATCCCACGGCCTGGCTCTCAACTGCTCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310109.5 |
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| CDS GCA 72 bp | GTGACGCCTGTCCCAACCAGTCCACAGGGCACGATGTaGTCAAACCACGTGAGGTCGGTAGAGCAGTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VTPVPTSPQGTM*SNHVRSVEQLR Trigger: TCTCAACTGCTCTACCGACCTCACGTGGTTTGAGCACATCGTGCCCTGTGGACTGGTTGGGACAGGCGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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| CDS CCA 72 bp | AAAGGTGGCATTACTTCTTCCACGGTGACGTGCCTCTaGAGCTCCTTACTCAAGGAAGTGACGCCTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: KGGITSSTVTCL*SSLLKEVTPVP Trigger: TGGGACAGGCGTCACTTCCTTGAGTAAGGAGCTCCAGAGGCACGTCACCGTGGAAGAAGTAATGCCACCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000310109.5 ENST00000527115.1 |
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