Pregenerated sensors for LIPN (Homo sapiens)
Ensembl gene IDs: ENSG00000204020Ensembl transcript IDs: ENST00000404459.2, ENST00000674982.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATGCTAGTTTTGAGAGAAGAATGGCTCCAGGGGCCAGCAGCTTGTaGATTTGCCAGCAGAGCAGGAAAGTATTATGGAGCTGGCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: NASFERRMAPGASSL*ICQQSRKVLWSWLW Trigger: CCAGAGCCAGCTCCATAATACTTTCCTGCTCTGCTGGCAAATCCACAAGCTGCTGGCCCCTGGAGCCATTCTTCTCTCAAAACTAGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATAGCAATGCATCTCCCCCAGGGTaGTGGGGGACAACCTCATTG | + |
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Preference number: 2 (lower is better) Translates to: KKLQALLLIPHSVHCHSNASPPG*WGTTSL Trigger: CAATGAGGTTGTCCCCCAGCACCCTGGGGGAGATGC...ATTGCTATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR CAA 90 bp | CATGCAAAGATGTCTCTAAACATAAATAACACTAACACAATTGACTaGGAAAACAGACTCCACTGTGCATCTCCCCCAGGGTGCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: HAKMSLNINNTNTID*ENRLHCASPPGCWG Trigger: CCCCCAGCACCCTGGGGGAGATGCACAGTGGAGTCTGTTTTCCAAGTCAATTGTGTTAGTGTTATTTATGTTTAGAGACATCTTTGCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTTCCTATCTGTCAGTTTTTCATGGAATGTTCAAACCCCTCAAAGAACAATCTCCCCCAGGGTGCTaGGGGACAACCTCATTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SVSYLSVFHGMFKPLKEQSPPGC*GTTSLL Trigger: CAACAATGAGGTTGTCCCCCAGCACCCTGGGGGAGA...TTGTTCTTTGAGGGGTTTGAACATTCCATGAAAAACTGACAGATAGGAAACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGCCACACTCTGTCCATTaGCATAGCAATCCATATAAA | + |
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Preference number: 2 (lower is better) Translates to: ELALDFPRIISLSTEGYQPHSVH*HSNPYK Trigger: TTTATATGGATTGCTATGGCAATGGACAGAGTGTGG...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGTCAGATTTACAGTCTTaGTCAGAATCTTTTGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: ELALDFPRIISLSTEGYQSDLQS*SESFVG Trigger: GCCAACAAAAGATTCTGAGCAAGACTGTAAATCTGA...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CCA 90 bp | TTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATCTAACACAATTGACTTaGAAAACAGACTCCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: LWSWLWIFQGSSLLAQKDLTQLT*KTDSTV Trigger: CACAGTGGAGTCTGTTTTCCAAGTCAATTGTGTTAG...ATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGATATCAGCCTGCATCAGAACACTTGATCAGATTTACAGTCTTGCTCAGATAAGGACCTGTAGATaGTCCCATGCAAAGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: RRISACIRTLDQIYSLAQIRTCR*SHAKMS Trigger: AGACATCTTTGCATGGGACCATCTACAGGTCCTTAT...CTGAGCAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGGCTGATATCCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATCATCTCTCTTAGCACAGAAGGATATCAGCCTGCATCAGAACACTTGATCAGTCCCTTATGGGCTTaGAAGCAACTTTTAATTGAA | + |
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Preference number: 2 (lower is better) Translates to: RIISLSTEGYQPASEHLISPLWA*KQLLIE Trigger: TTCAATTAAAAGTTGCTTCCAAGCCCATAAGGGACT...GATCAAGTGTTCTGATGCAGGCTGATATCCTTCTGTGCTAAGAGAGATGATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR CAA 90 bp | GAAGGATATCAGCCTGCATCAGAACACTTGATCAGATTTACAGTCTaGCTCAGAATCTTTTGTTGGCATCTTCTAATCCATTCTCTATGT | + |
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Preference number: 2 (lower is better) Translates to: EGYQPASEHLIRFTV*LRIFCWHLLIHSLC Trigger: ACATAGAGAATGGATTAGAAGATGCCAACAAAAGATTCTGAGCAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGGCTGATATCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTTCCTATCTGTCAGTTTTTCATGGAATGTTCAAACCCCTCAAAGAACAAAAAAGAGGGCTTCTCTaGAAGAATCTTTGGGGACTT | + |
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Preference number: 2 (lower is better) Translates to: SVSYLSVFHGMFKPLKEQKRGLL*KNLWGL Trigger: AAGTCCCCAAAGATTCTTCCAGAGAAGCCCTCTTTT...TTGTTCTTTGAGGGGTTTGAACATTCCATGAAAAACTGACAGATAGGAAACTGA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CCA 90 bp | CTATCTAGCCTAGTACTTTCTGCTTCCATCTTTAGCTCAATCTTTTATTGTCAGTCTGTCAGTTTTTCATaGAATGTTCAAACCCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: LSSLVLSASIFSSIFYCQSVSFS*NVQTPQ Trigger: TTGAGGGGTTTGAACATTCCATGAAAAACTGACAGA...CTGACAATAAAAGATTGAGCTAAAGATGGAAGCAGAAAGTACTAGGCTAGATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR GCA 72 bp | AGAAGAATGGCTCCAGGGGCCAGCAGCTTGTGGATTTaGCAGCAGAGCAGGAAAGTATTATGGAGCTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: RRMAPGASSLWI*QQSRKVLWSWL Trigger: GAGCCAGCTCCATAATACTTTCCTGCTCTGCTGGCAAATCCACAAGCTGCTGGCCCCTGGAGCCATTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR CCA 72 bp | TTTGAGAGAAGAATGGCTCCAGGGGCCAGCAGCTTGTaGATTTGCCAGCAGAGCAGGAAAGTATTATGGAGC | + |
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Preference number: 3 (lower is better) Translates to: FERRMAPGASSL*ICQQSRKVLWS Trigger: GCTCCATAATACTTTCCTGCTCTGCTGGCAAATCCACAAGCTGCTGGCCCCTGGAGCCATTCTTCTCTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR CCA 72 bp | TGCCAGCAGAGCAGGAAAGTATTATGGAGCTGGCTCTaGATTTTCCAAGGATCATCTCTCTTAGCACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: CQQSRKVLWSWL*IFQGSSLLAQK Trigger: CTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACTTTCCTGCTCTGCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CAA 90 bp | TTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATCCTGCATCAGAACACTaGATCAGATTTACAGTCTTG | + |
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Preference number: 3 (lower is better) Translates to: LWSWLWIFQGSSLLAQKDPASEH*IRFTVL Trigger: CAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGG...ATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGATAACACTAACACAATaGACTTGGAAAACAGACTCC | + |
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Preference number: 3 (lower is better) Translates to: ELALDFPRIISLSTEGYQITLTQ*TWKTDS Trigger: GGAGTCTGTTTTCCAAGTCAATTGTGTTAGTGTTAT...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCCAGCAGAGCAGGAAAGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATATCAGATTTACAGTCTaGCTCAGAATCTTTTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: FASRAGKYYGAGSGFSKDIRFTV*LRIFCW Trigger: CCAACAAAAGATTCTGAGCAAGACTGTAAATCTGAT...ATCCTTGGAAAATCCAGAGCCAGCTCCATAATACTTTCCTGCTCTGCTGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR-3UTR CAA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGCTCAGAATCTTTTGTaGGCATCTTCTAATCCATTC | + |
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Preference number: 3 (lower is better) Translates to: SIMELALDFPRIISLSTEAQNLL*ASSNPF Trigger: GAATGGATTAGAAGATGCCAACAAAAGATTCTGAGC...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR TCA 72 bp | TTAGCACAGAAGGATATCAGCCTGCATCAGAACACTTaGTCAGATTTACAGTCTTGCTCAGAATCTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: LAQKDISLHQNT*SDLQSCSESFV Trigger: AACAAAAGATTCTGAGCAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGGCTGATATCCTTCTGTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAATCACTGTACATCCGTTaGGGGGCATCGAGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SIMELALDFPRIISLSTESLYIR*GASRPQ Trigger: CTGGGGCCTCGATGCCCCTCAACGGATGTACAGTGA...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGATATCAGCCTGCATCAGAACACTTGATCAGATTTACAGTCTTGCTCAGGCATCTCCCCCAGGGTaGTGGGGGACAACCTCATTG | + |
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Preference number: 4 (lower is better) Translates to: RRISACIRTLDQIYSLAQASPPG*WGTTSL Trigger: CAATGAGGTTGTCCCCCAGCACCCTGGGGGAGATGC...CTGAGCAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGGCTGATATCCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | AAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATAGCAATATCCTGGCCACATCCTaGGGTGTTACGAGGACATCA | + |
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Preference number: 4 (lower is better) Translates to: KKLQALLLIPHSVHCHSNILATS*GVTRTS Trigger: TGATGTCCTCGTAACACCCCAGGATGTGGCCAGGAT...ATTGCTATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | TTTATAAAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATTCTCCCCCAGGGTGCTaGGGGACAACCTCATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: FIKKLQALLLIPHSVHCHSPPGC*GTTSLL Trigger: CAACAATGAGGTTGTCCCCCAGCACCCTGGGGGAGA...ATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTTTATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGGGCCAGCAGCTTGTaGATTTGCCAGCAGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SIMELALDFPRIISLSTEGASSL*ICQQSR Trigger: CCTGCTCTGCTGGCAAATCCACAAGCTGCTGGCCCC...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | TTTATAAAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATCTGCATATACACAACTaGCCGGGGACCTGTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: FIKKLQALLLIPHSVHCHLHIHN*PGTCAP Trigger: AGGAGCACAGGTCCCCGGCCAGTTGTGTATATGCAG...ATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTTTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | AAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATAGCAATACCCATCTTCAGTGGTaGCTTCATACTCTTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: KKLQALLLIPHSVHCHSNTHLQW*LHTLHW Trigger: CCAGTGAAGAGTATGAAGTCACCACTGAAGATGGGT...ATTGCTATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR GCA 90 bp | TTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATGCAAACAGGGCATGCTaGATATACACAACTGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LWSWLWIFQGSSLLAQKDANRAC*IYTTGR Trigger: CCGGCCAGTTGTGTATATGCAGCATGCCCTGTTTGC...ATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR GCA 90 bp | TTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATCCAGTAGGCATTGTCTaGAAACAGGGCATGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LWSWLWIFQGSSLLAQKDPVGIV*KQGMLH Trigger: ATGCAGCATGCCCTGTTTGCAGACAATGCCTACTGG...ATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGCCAGTTCAGGCATGGTaGAAAAGGCTACAAACCCTA | + |
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Preference number: 4 (lower is better) Translates to: ELALDFPRIISLSTEGYQPVQAW*KRLQTL Trigger: TAGGGTTTGTAGCCTTTTCCACCATGCCTGAACTGG...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAACGTGGGATATTTGAATaGGATCGTAGGACCCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SIMELALDFPRIISLSTERGIFE*DRRTQG Trigger: GCCTTGGGTCCTACGATCTCATTCAAATATCCCACG...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | AAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATAGCAATAGTAATGAAGACTCTTaGTTTGAGGGAGTATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KKLQALLLIPHSVHCHSNSNEDS*FEGVSW Trigger: CCAGGATACTCCCTCAAATCAAGAGTCTTCATTACT...ATTGCTATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR GCA 90 bp | AAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATAGCAATCATTTTGATTCTTTGTaGCAGTTCAGGCATGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KKLQALLLIPHSVHCHSNHFDSL*QFRHGG Trigger: TCCACCATGCCTGAACTGGCACAAAGAATCAAAATG...ATTGCTATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | AAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATAGCAATATAAGGACCTGTAGATaGTCCCATGCAAAGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: KKLQALLLIPHSVHCHSNIRTCR*SHAKMS Trigger: AGACATCTTTGCATGGGACCATCTACAGGTCCTTAT...ATTGCTATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | TTTGCCAGCAGAGCAGGAAAGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCCCAGTCATAAGCTCTaGATTCATCAGAGTGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: FASRAGKYYGAGSGFSKDPSHKL*IHQSGK Trigger: TTTACCACTCTGATGAATTCAGAGCTTATGACTGGG...ATCCTTGGAAAATCCAGAGCCAGCTCCATAATACTTTCCTGCTCTGCTGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | TTTGCCAGCAGAGCAGGAAAGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCTGCATCAGAACACTTaGTCAGATTTACAGTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FASRAGKYYGAGSGFSKDLHQNT*SDLQSC Trigger: GCAAGACTGTAAATCTGATCAAGTGTTCTGATGCAG...ATCCTTGGAAAATCCAGAGCCAGCTCCATAATACTTTCCTGCTCTGCTGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR GCA 90 bp | CTATCTAGCCTAGTACTTTCTGCTTCCATCTTTAGCTCAATCTTTTATTGTCAGAAACAGACTCCACTGTaGATCTCCCCCAGGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSSLVLSASIFSSIFYCQKQTPL*ISPRVL Trigger: CAGCACCCTGGGGGAGATGCACAGTGGAGTCTGTTT...CTGACAATAAAAGATTGAGCTAAAGATGGAAGCAGAAAGTACTAGGCTAGATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR GCA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGAGAAGGATATCAGCCTaGATCAGAACACTTGATCAG | + |
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Preference number: 4 (lower is better) Translates to: ELALDFPRIISLSTEGYQRRISA*IRTLDQ Trigger: CTGATCAAGTGTTCTGATGCAGGCTGATATCCTTCT...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGAGCAGGAAAGTATTATaGAGCTGGCTCTGGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: ELALDFPRIISLSTEGYQSRKVL*SWLWIF Trigger: GAAAATCCAGAGCCAGCTCCATAATACTTTCCTGCT...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAAAATGCCTAGTTAGATaGGCTTCACCTGCTCACAAG | + |
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Preference number: 4 (lower is better) Translates to: SIMELALDFPRIISLSTEKCLVR*ASPAHK Trigger: CTTGTGAGCAGGTGAAGCTCATCTAACTAGGCATTT...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGAGGCAAAATTCATTTTaGTTCTTTGTGCCAGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: ELALDFPRIISLSTEGYQRQNSF*FFVPVQ Trigger: CTGAACTGGCACAAAGAATCAAAATGAATTTTGCCT...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR GCA 90 bp | TTTATAAAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATTGGTGGTTACAAAAATaGGGCAATCAGGTTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: FIKKLQALLLIPHSVHCHWWLQK*GNQVSI Trigger: AATGGAAACCTGATTGCCGCATTTTTGTAACCACCA...ATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTTTATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | TCAGTTTCCTATCTGTCAGTTTTTCATGGAATGTTCAAACCCCTCAAAGAACAATTTGAGGGAGTATCCTaGCCACATCCTGGGGTGTTA | + |
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Preference number: 4 (lower is better) Translates to: SVSYLSVFHGMFKPLKEQFEGVS*PHPGVL Trigger: TAACACCCCAGGATGTGGCCAGGATACTCCCTCAAA...TTGTTCTTTGAGGGGTTTGAACATTCCATGAAAAACTGACAGATAGGAAACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | AGGATCATCTCTCTTAGCACAGAAGGATATCAGCCTGCATCAGAACACTTGATCCAGACAAAATCAAAGTaGTTCCAATCTGGCAATAGC | + |
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Preference number: 4 (lower is better) Translates to: RIISLSTEGYQPASEHLIQTKSK*FQSGNS Trigger: GCTATTGCCAGATTGGAACCACTTTGATTTTGTCTG...GATCAAGTGTTCTGATGCAGGCTGATATCCTTCTGTGCTAAGAGAGATGATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | AGGATCATCTCTCTTAGCACAGAAGGATATCAGCCTGCATCAGAACACTTGATCCTAACACAATTGACTTaGAAAACAGACTCCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: RIISLSTEGYQPASEHLILTQLT*KTDSTV Trigger: CACAGTGGAGTCTGTTTTCCAAGTCAATTGTGTTAG...GATCAAGTGTTCTGATGCAGGCTGATATCCTTCTGTGCTAAGAGAGATGATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGATATCAGCCTGCATCAGAACACTTGATCAGATTTACAGTCTTGCTCAGCCACACTCTGTCCATTaGCATAGCAATCCATATAAA | + |
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Preference number: 4 (lower is better) Translates to: RRISACIRTLDQIYSLAQPHSVH*HSNPYK Trigger: TTTATATGGATTGCTATGGCAATGGACAGAGTGTGG...CTGAGCAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGGCTGATATCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | AGGATCATCTCTCTTAGCACAGAAGGATATCAGCCTGCATCAGAACACTTGATCTCTGTCAGTTTTTCATaGAATGTTCAAACCCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: RIISLSTEGYQPASEHLISVSFS*NVQTPQ Trigger: TTGAGGGGTTTGAACATTCCATGAAAAACTGACAGA...GATCAAGTGTTCTGATGCAGGCTGATATCCTTCTGTGCTAAGAGAGATGATCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | AGATGGTCCCATGCAAAGATGTCTCTAAACATAAATAACACTAACACAATTGACACCAGTGGGAGCATGTaGCATATACACATCCATTCG | + |
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Preference number: 4 (lower is better) Translates to: RWSHAKMSLNINNTNTIDTSGSM*HIHIHS Trigger: CGAATGGATGTGTATATGTCACATGCTCCCACTGGT...GTCAATTGTGTTAGTGTTATTTATGTTTAGAGACATCTTTGCATGGGACCATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAATCATATTTTTCTTGTTaGATCCAGCCCATAAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SIMELALDFPRIISLSTESYFSC*IQPIRT Trigger: TGTCCTTATGGGCTGGATCCAACAAGAAAAATATGA...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAAGTCCCTTATGGGCTTaGAAGCAACTTTTAATTGAA | + |
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Preference number: 4 (lower is better) Translates to: SIMELALDFPRIISLSTESPLWA*KQLLIE Trigger: TTCAATTAAAAGTTGCTTCCAAGCCCATAAGGGACT...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| 3UTR CAA 72 bp | CAGCCTGCATCAGAACACTTGATCAGATTTACAGTCTaGCTCAGAATCTTTTGTTGGCATCTTCTAATCCAT | + |
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Preference number: 4 (lower is better) Translates to: QPASEHLIRFTV*LRIFCWHLLIH Trigger: ATGGATTAGAAGATGCCAACAAAAGATTCTGAGCAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | CTATCTAGCCTAGTACTTTCTGCTTCCATCTTTAGCTCAATCTTTTATTGTCAGTTATGGAGCTGGCTCTaGATTTTCCAAGGATCATCT | + |
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Preference number: 4 (lower is better) Translates to: LSSLVLSASIFSSIFYCQLWSWL*IFQGSS Trigger: AGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAA...CTGACAATAAAAGATTGAGCTAAAGATGGAAGCAGAAAGTACTAGGCTAGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | TCAGTTTCCTATCTGTCAGTTTTTCATGGAATGTTCAAACCCCTCAAAGAACAAGAAGTCTATTACTCCTaGGAGATCATATTTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SVSYLSVFHGMFKPLKEQEVYYS*EIIFGH Trigger: ATGGCCAAATATGATCTCCCAGGAGTAATAGACTTC...TTGTTCTTTGAGGGGTTTGAACATTCCATGAAAAACTGACAGATAGGAAACTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR TCA 90 bp | AGATGGTCCCATGCAAAGATGTCTCTAAACATAAATAACACTAACACAATTGACTTTCTCATCTGTCTCTaGGAGTGTTTTGTGTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RWSHAKMSLNINNTNTIDFLICL*ECFVSS Trigger: AGAAGACACAAAACACTCTCAGAGACAGATGAGAAA...GTCAATTGTGTTAGTGTTATTTATGTTTAGAGACATCTTTGCATGGGACCATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CCA 90 bp | AGATGGTCCCATGCAAAGATGTCTCTAAACATAAATAACACTAACACAATTGACAAAGTATTATGGAGCTaGCTCTGGATTTTCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RWSHAKMSLNINNTNTIDKVLWS*LWIFQG Trigger: TCCTTGGAAAATCCAGAGCCAGCTCCATAATACTTT...GTCAATTGTGTTAGTGTTATTTATGTTTAGAGACATCTTTGCATGGGACCATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | AAGAAGTTACAGGCCCTCCTCCTAATCCCACACTCTGTCCATTGCCATAGCAATCCAGGGGCCAGCAGCTaGTGGATTTGCCAGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: KKLQALLLIPHSVHCHSNPGASS*WICQQS Trigger: GCTCTGCTGGCAAATCCACAAGCTGCTGGCCCCTGG...ATTGCTATGGCAATGGACAGAGTGTGGGATTAGGAGGAGGGCCTGTAACTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | ACTAACACAATTGACTTGGAAAACAGACTCCACTGTGCATCTCCCCCAGGGTGCTTCACTGTACATCCGTaGAGGGGCATCGAGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: TNTIDLENRLHCASPPGCFTVHP*RGIEAP Trigger: TGGGGCCTCGATGCCCCTCAACGGATGTACAGTGAA...GCACCCTGGGGGAGATGCACAGTGGAGTCTGTTTTCCAAGTCAATTGTGTTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS GCA 90 bp | TCCAAGGCTTCCATTAGCATAATTCTCAAGCCAGTAGGCATTGTCTaGAAACAGGGCATGCTGCATATACACAACTGGCCGGGGACCTGT | + |
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Preference number: 5 (lower is better) Translates to: SKASISIILKPVGIV*KQGMLHIHNWPGTC Trigger: ACAGGTCCCCGGCCAGTTGTGTATATGCAGCATGCCCTGTTTGCAGACAATGCCTACTGGCTTGAGAATTATGCTAATGGAAGCCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000404459.2 ENST00000674982.1 |
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| CDS GCA 90 bp | GCTGTGACCAGAGACCCAGGAAAGGTTTGCCCTACATATAGTCTGTaGACTGCAGGCTCACAGCTACTTAGAGTACTAGGGTTATTCCCA | + |
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Preference number: 5 (lower is better) Translates to: AVTRDPGKVCPTYSL*TAGSQLLRVLGLFP Trigger: TGGGAATAACCCTAGTACTCTAAGTAGCTGTGAGCCTGCAGTGCACAGACTATATGTAGGGCAAACCTTTCCTGGGTCTCTGGTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS-3UTR CAA 90 bp | ACTAACACAATTGACTTGGAAAACAGACTCCACTGTGCATCTCCCCCAGGGTGCATGCCCGTGGGATATTaGAATGAGATCGTAGGACCC | + |
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Preference number: 5 (lower is better) Translates to: TNTIDLENRLHCASPPGCMPVGY*NEIVGP Trigger: GGGTCCTACGATCTCATTCAAATATCCCACGGGCAT...GCACCCTGGGGGAGATGCACAGTGGAGTCTGTTTTCCAAGTCAATTGTGTTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS TCA 90 bp | ATGTTATTCCTGGGAAGTTGCATCACCGTAGTCAATATGCTGCTGTaGCCAGAGACCCAGGAAAGGTTTGCCCTACATATAGTCTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: MLFLGSCITVVNMLL*PETQERFALHIVCA Trigger: TGCACAGACTATATGTAGGGCAAACCTTTCCTGGGTCTCTGGTCACAGCAGCATATTGACTACGGTGATGCAACTTCCCAGGAATAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS-3UTR CAA 90 bp | AGGATCATCTCTCTTAGCACAGAAGGATATCAGCCTGCATCAGAACACTTGATCGTGTTTTGTGTCTTCTaGACCAAGTGTTTCCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: RIISLSTEGYQPASEHLIVFCVF*TKCFPD Trigger: GTCGGGGAAACACTTGGTCAAGAAGACACAAAACAC...GATCAAGTGTTCTGATGCAGGCTGATATCCTTCTGTGCTAAGAGAGATGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | TTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATGAAGACTCTTGATTaGAGGGAGTATCCTGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: LWSWLWIFQGSSLLAQKDMKTLD*REYPGH Trigger: GTGGCCAGGATACTCCCTCAAATCAAGAGTCTTCAT...ATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS TCA 90 bp | TCGGGTTGTTTTGAAGATCAGAGGGAGATACTGTGGGGAAGGTCCTaGACACAAGACCCTACACATAACGAATGCTCAATAAGTGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGCFEDQREILWGRS*TQDPTHNECSISVR Trigger: TCTAACACTTATTGAGCATTCGTTATGTGTAGGGTCTTGTGTTCAGGACCTTCCCCACAGTATCTCCCTCTGATCTTCAAAACAACCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS-3UTR CAA 90 bp | TTTGCCAGCAGAGCAGGAAAGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCACAGATCAAACAAGTaGTTGTTAAAAGCAGCCACA | + |
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Preference number: 5 (lower is better) Translates to: FASRAGKYYGAGSGFSKDHRSNK*LLKAAT Trigger: TGTGGCTGCTTTTAACAACAACTTGTTTGATCTGTG...ATCCTTGGAAAATCCAGAGCCAGCTCCATAATACTTTCCTGCTCTGCTGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGTCTCTGAGAGTGTTTaGTGTCTTCTTGACCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SIMELALDFPRIISLSTEVSESV*CLLDQV Trigger: CACTTGGTCAAGAAGACACAAAACACTCTCAGAGAC...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | TTTGCCAGCAGAGCAGGAAAGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATACTAACACAATTGACTaGGAAAACAGACTCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: FASRAGKYYGAGSGFSKDTNTID*ENRLHC Trigger: ACAGTGGAGTCTGTTTTCCAAGTCAATTGTGTTAGT...ATCCTTGGAAAATCCAGAGCCAGCTCCATAATACTTTCCTGCTCTGCTGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGCTTGCTCAGAATCTTTaGTTGGCATCTTCTAATCCA | + |
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Preference number: 5 (lower is better) Translates to: ELALDFPRIISLSTEGYQLAQNL*LASSNP Trigger: TGGATTAGAAGATGCCAACAAAAGATTCTGAGCAAG...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | TTTGCCAGCAGAGCAGGAAAGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATGTACCAAAAACAGCCTaGATTATGGAATTTGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FASRAGKYYGAGSGFSKDVPKTA*IMEFGS Trigger: ACTTCCAAATTCCATAATCAAGGCTGTTTTTGGTAC...ATCCTTGGAAAATCCAGAGCCAGCTCCATAATACTTTCCTGCTCTGCTGGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGTCTAAAAAGAAACCTTaGGTACCAAAAACAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ELALDFPRIISLSTEGYQSKKKP*VPKTAL Trigger: CAAGGCTGTTTTTGGTACCAAAGGTTTCTTTTTAGA...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGCAGAGTATCTTATTGTaGCAGATTTTGGTAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ELALDFPRIISLSTEGYQQSILL*QILVEA Trigger: AGCTTCTACCAAAATCTGCAACAATAAGATACTCTG...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | GAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATATCAGTTTATATGCAGAATGTaGTGTACTGATGAACCAGTG | + |
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Preference number: 5 (lower is better) Translates to: ELALDFPRIISLSTEGYQFICRM*CTDEPV Trigger: CACTGGTTCATCAGTACACAACATTCTGCATATAAA...CTGATATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | AGAAGGATATCAGCCTGCATCAGAACACTTGATCAGATTTACAGTCTTGCTCAGTTTGGTGGCTTCTCATaGCTTTTAAGATGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RRISACIRTLDQIYSLAQFGGFS*LLRWRK Trigger: CTTCCTCCATCTTAAAAGCAATGAGAAGCCACCAAA...CTGAGCAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGGCTGATATCCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAACCTGCATCAGAACACTaGATCAGATTTACAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SIMELALDFPRIISLSTEPASEH*IRFTVL Trigger: CAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGG...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | TTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAGGATAGATCAAACAAGTTGTaGTTAAAAGCAGCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: LWSWLWIFQGSSLLAQKDRSNKL*LKAATS Trigger: TGATGTGGCTGCTTTTAACAACAACTTGTTTGATCT...ATCCTTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | AGAAGGATATCAGCCTGCATCAGAACACTTGATCAGATTTACAGTCTTGCTCAGATAACACTAACACAATaGACTTGGAAAACAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRISACIRTLDQIYSLAQITLTQ*TWKTDS Trigger: GGAGTCTGTTTTCCAAGTCAATTGTGTTAGTGTTAT...CTGAGCAAGACTGTAAATCTGATCAAGTGTTCTGATGCAGGCTGATATCCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | AGTATTATGGAGCTGGCTCTGGATTTTCCAAGGATCATCTCTCTTAGCACAGAAATCAGATTTACAGTCTaGCTCAGAATCTTTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SIMELALDFPRIISLSTEIRFTV*LRIFCW Trigger: CCAACAAAAGATTCTGAGCAAGACTGTAAATCTGAT...TTCTGTGCTAAGAGAGATGATCCTTGGAAAATCCAGAGCCAGCTCCATAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS-3UTR CAA 90 bp | CTATCTAGCCTAGTACTTTCTGCTTCCATCTTTAGCTCAATCTTTTATTGTCAGGCTCAGAATCTTTTGTaGGCATCTTCTAATCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSLVLSASIFSSIFYCQAQNLL*ASSNPF Trigger: GAATGGATTAGAAGATGCCAACAAAAGATTCTGAGC...CTGACAATAAAAGATTGAGCTAAAGATGGAAGCAGAAAGTACTAGGCTAGATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS TCA 90 bp | TGTAATGTTTCATATTATCAGCGTCATTTCCCCAGTCATAAGCTCTaGATTCATCAGAGTGGTAAAGCTGTTTTATATGCAGAATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CNVSYYQRHFPSHKL*IHQSGKAVLYAECC Trigger: ACAACATTCTGCATATAAAACAGCTTTACCACTCTGATGAATTCAGAGCTTATGACTGGGGAAATGACGCTGATAATATGAAACATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS TCA 72 bp | CTGGGAAGTTGCATCACCGTAGTCAATATGCTGCTGTaGCCAGAGACCCAGGAAAGGTTTGCCCTACATATA | + |
|
Preference number: 6 (lower is better) Translates to: LGSCITVVNMLL*PETQERFALHI Trigger: TATATGTAGGGCAAACCTTTCCTGGGTCTCTGGTCACAGCAGCATATTGACTACGGTGATGCAACTTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS GCA 72 bp | TCCATTAGCATAATTCTCAAGCCAGTAGGCATTGTCTaGAAACAGGGCATGCTGCATATACACAACTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SISIILKPVGIV*KQGMLHIHNWP Trigger: CGGCCAGTTGTGTATATGCAGCATGCCCTGTTTGCAGACAATGCCTACTGGCTTGAGAATTATGCTAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000404459.2 ENST00000674982.1 |
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| CDS TCA 72 bp | TTTGAAGATCAGAGGGAGATACTGTGGGGAAGGTCCTaGACACAAGACCCTACACATAACGAATGCTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: FEDQREILWGRS*TQDPTHNECSI Trigger: TATTGAGCATTCGTTATGTGTAGGGTCTTGTGTTCAGGACCTTCCCCACAGTATCTCCCTCTGATCTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS CAA 90 bp | TGGAATTATTTCTTTGAATTTGGAACACATGTTATTCCTGGGAAGTaGCATCACCGTAGTCAATATGCTGCTGTGACCAGAGACCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WNYFFEFGTHVIPGK*HHRSQYAAVTRDPG Trigger: TCCTGGGTCTCTGGTCACAGCAGCATATTGACTACGGTGATGCAACTTCCCAGGAATAACATGTGTTCCAAATTCAAAGAAATAATTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS CAA 72 bp | AAATTACTGAAATGCTCTGAGCCTATGTTTTCTCATTaGGGAAATAAACAGGGTAGTACCTGGTTTACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KLLKCSEPMFSH*GNKQGSTWFTG Trigger: CCCCGTAAACCAGGTACTACCCTGTTTATTTCCCAAATGAGAAAACATAGGCTCAGAGCATTTCAGTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS TCA 72 bp | AGTGACCCTCATAAACATACCTATTGTAGTGCCAAGTaGATGTCCAATGAAATACAATTTCTCCTGACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SDPHKHTYCSAK*MSNEIQFLLTS Trigger: ACTGGTCAGGAGAAATTGTATTTCATTGGACATTCACTTGGCACTACAATAGGTATGTTTATGAGGGTCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS TCA 72 bp | TCATATTATCAGCGTCATTTCCCCAGTCATAAGCTCTaGATTCATCAGAGTGGTAAAGCTGTTTTATATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SYYQRHFPSHKL*IHQSGKAVLYA Trigger: TGCATATAAAACAGCTTTACCACTCTGATGAATTCAGAGCTTATGACTGGGGAAATGACGCTGATAATATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS CAA 90 bp | GCCCATAAGGACATAAATTCGCTACATATCAACCAGAGTATCTTATaGTTGCAGATTTTGGTAGAAGCTATCTTCGTTTTCTTATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AHKDINSLHINQSIL*LQILVEAIFVFLSS Trigger: AGAAGATAAGAAAACGAAGATAGCTTCTACCAAAATCTGCAACAATAAGATACTCTGGTTGATATGTAGCGAATTTATGTCCTTATGGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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| CDS TCA 72 bp | TACTATTTATGGCCTTTGCAACTCTTGAGAAATTACTaGAATGCTCTGAGCCTATGTTTTCTCATTTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: YYLWPLQLLRNY*NALSLCFLIWE Trigger: TTCCCAAATGAGAAAACATAGGCTCAGAGCATTTCAGTAATTTCTCAAGAGTTGCAAAGGCCATAAATAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS TCA 72 bp | AATACCCATCTTTGGAAACAGGGGTTTTGTAAATCATaGTTCTACTATTTATGGCCTTTGCAACTCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NTHLWKQGFCKS*FYYLWPLQLLR Trigger: TCTCAAGAGTTGCAAAGGCCATAAATAGTAGAATCATGATTTACAAAACCCCTGTTTCCAAAGATGGGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS GCA 72 bp | TTTATGGCCTTTGCAACTCTTGAGAAATTACTGAAATaGTCTGAGCCTATGTTTTCTCATTTGGGAAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: FMAFATLEKLLK*SEPMFSHLGNK Trigger: TTTATTTCCCAAATGAGAAAACATAGGCTCAGAGCATTTCAGTAATTTCTCAAGAGTTGCAAAGGCCATAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674982.1 |
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| CDS CAA 72 bp | GACATAAATTCGCTACATATCAACCAGAGTATCTTATaGTTGCAGATTTTGGTAGAAGCTATCTTCGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: DINSLHINQSIL*LQILVEAIFVF Trigger: GAAAACGAAGATAGCTTCTACCAAAATCTGCAACAATAAGATACTCTGGTTGATATGTAGCGAATTTATGTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000404459.2 |
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