RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LIPG (Homo sapiens)

Ensembl gene IDs: ENSG00000101670

Ensembl transcript IDs: ENST00000261292.9, ENST00000427224.6, ENST00000577628.5, ENST00000579750.1, ENST00000580036.5, ENST00000583083.1, ENST00000623277.1

Found 680 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGTCGGAAGGACTTCTCACTGAGGCTCAAAGCAGGCTGAGCAGCTaGCAGCCTTCTACACAGGGCCTCTTCGGAGCCAGCGTTCCTCGT +
Preference number: 1 (lower is better)
Translates to: LSEGLLTEAQSRLSS*QPSTQGLFGASVPR
Trigger: ACGAGGAACGCTGGCTCCGAAGAGGCCCTGTGTAGAAGGCTGTCAGCTGCTCAGCCTGCTTTGAGCCTCAGTGAGAAGTCCTTCCGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 90 bp TCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTaGTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTC +
Preference number: 1 (lower is better)
Translates to: SREESQPSQETSCSQ*SRVKAEKNPSIGWV
Trigger: GACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR GCA 90 bp CCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGATACCAGGCCTaGCATCCTGACATGAGTCAGCTCCTGTCGGAAGGACTTCTCACT +
Preference number: 1 (lower is better)
Translates to: PMRTPTARARARYQA*HPDMSQLLSEGLLT
Trigger: AGTGAGAAGTCCTTCCGACAGGAGCTGACTCATGTCAGGATGGCAGGCCTGGTATCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 90 bp CAACAGCTAGGGCCCGAGCAAGATACCAGGCCTGCCATCCTGACATaGGTCAGCTCCTGTCGGAAGGACTTCTCACTGAGGCTCAAAGCA +
Preference number: 1 (lower is better)
Translates to: QQLGPEQDTRPAILT*VSSCRKDFSLRLKA
Trigger: TGCTTTGAGCCTCAGTGAGAAGTCCTTCCGACAGGAGCTGACTCATGTCAGGATGGCAGGCCTGGTATCTTGCTCGGGCCCTAGCTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 90 bp AGGACGGAATGGCTAAGACGTAAGCAGTATGGTCAGTGCAACCCATaGGAACCCCAACAGCTAGGGCCCGAGCAAGATACCAGGCCTGCC +
Preference number: 1 (lower is better)
Translates to: RTEWLRRKQYGQCNP*EPQQLGPEQDTRPA
Trigger: GGCAGGCCTGGTATCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGCTTACGTCTTAGCCATTCCGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 90 bp AGAGGGCACCGACACCTCTCTTCACCTCTCTATGGCAACCGTTGCTaGCATGGAAACCACTGGGCATACACGGGGAGGGACAAATACTGG +
Preference number: 1 (lower is better)
Translates to: RGHRHLSSPLYGNRC*HGNHWAYTGRDKYW
Trigger: CCAGTATTTGTCCCTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGGTGTCGGTGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp CCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTaGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGG +
Preference number: 1 (lower is better)
Translates to: PSIGWVLSSNFPPWA*IAGSLAALLARLAR
Trigger: CCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR CCA 90 bp CCACAGTTACAAAAGAGGGCACCGACACCTCTCTTCACCTCTCTATaGCAACCGTTGCTGCCATGGAAACCACTGGGCATACACGGGGAG +
Preference number: 1 (lower is better)
Translates to: PQLQKRAPTPLFTSL*QPLLPWKPLGIHGE
Trigger: CTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGGTGTCGGTGCCCTCTTTTGTAACTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 90 bp AAAAGAGGGCACCGACACCTCTCTTCACCTCTCTATGGCAACCGTTaGTGCCATGGAAACCACTGGGCATACACGGGGAGGGACAAATAC +
Preference number: 1 (lower is better)
Translates to: KRGHRHLSSPLYGNR*CHGNHWAYTGRDKY
Trigger: GTATTTGTCCCTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGGTGTCGGTGCCCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp TCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTaGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGA +
Preference number: 1 (lower is better)
Translates to: SQCSRVKAEKNPSIG*VLSSNFPPWAWIAG
Trigger: TCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR CCA 90 bp ACGAGAGGCCCCAGGCACCCAGCTGCTTACACACAAATCTGGACTTaGTGCTCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTC +
Preference number: 1 (lower is better)
Translates to: TRGPRHPAAYTQIWT*CSGGVDRGLELELF
Trigger: GAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGAGCACCAAGTCCAGATTTGTGTGTAAGCAGCTGGGTGCCTGGGGCCTCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp GCACCGACACCTCTCTTCACCTCTCTATGGCAACCGTTGCTGCCATaGAAACCACTGGGCATACACGGGGAGGGACAAATACTGGTGTTT +
Preference number: 1 (lower is better)
Translates to: APTPLFTSLWQPLLP*KPLGIHGEGQILVF
Trigger: AAACACCAGTATTTGTCCCTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGGTGTCGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 90 bp AGAGGCCCCAGGCACCCAGCTGCTTACACACAAATCTGGACTTGGTaGTCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAG +
Preference number: 1 (lower is better)
Translates to: RGPRHPAAYTQIWTW*SGGVDRGLELELFK
Trigger: CTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGAGCACCAAGTCCAGATTTGTGTGTAAGCAGCTGGGTGCCTGGGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp CCCCAGGCACCCAGCTGCTTACACACAAATCTGGACTTGGTGCTCTaGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAGAGAGG +
Preference number: 1 (lower is better)
Translates to: PQAPSCLHTNLDLVL*RCGQRFGVRAIQER
Trigger: CCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGAGCACCAAGTCCAGATTTGTGTGTAAGCAGCTGGGTGCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp CTCTCTTCACCTCTCTATGGCAACCGTTGCTGCCATGGAAACCACTaGGCATACACGGGGAGGGACAAATACTGGTGTTTACTGAAAGGC +
Preference number: 1 (lower is better)
Translates to: LSSPLYGNRCCHGNH*AYTGRDKYWCLLKG
Trigger: GCCTTTCAGTAAACACCAGTATTTGTCCCTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp AAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATaGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTT +
Preference number: 1 (lower is better)
Translates to: KNPSIGWVLSSNFPP*AWIAGSLAALLARL
Trigger: AAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR TCA 90 bp GTCAAAGGAAGTCCTGTGGAAGTTCCCCTGACTCTAACTAGTAACTaGACCCCCAAGCCAAAGAAGGCACTTGCAGTCATCCAGGCTATG +
Preference number: 1 (lower is better)
Translates to: VKGSPVEVPLTLTSN*TPKPKKALAVIQAM
Trigger: CATAGCCTGGATGACTGCAAGTGCCTTCTTTGGCTTGGGGGTTCAGTTACTAGTTAGAGTCAGGGGAACTTCCACAGGACTTCCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 90 bp GCCTCAGCCCTTTCTCATATGGCATCTGTCCATTGCCTCTGGCCATaGGCAATTCTTGTGAGTCCAAAACCATTTGCCTCTGGTGAAGGT +
Preference number: 1 (lower is better)
Translates to: ASALSHMASVHCLWP*AILVSPKPFASGEG
Trigger: ACCTTCACCAGAGGCAAATGGTTTTGGACTCACAAGAATTGCTCATGGCCAGAGGCAATGGACAGATGCCATATGAGAAAGGGCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 90 bp AGTCCTTGTTTGTCTCACGTCTGGGGCATATTGGTGGGAACTGGCTaGAAAAGTCTTCATGGAGTTTCAGAGATAGACTTTGCCTCCAGG +
Preference number: 1 (lower is better)
Translates to: SPCLSHVWGILVGTG*KSLHGVSEIDFASR
Trigger: CCTGGAGGCAAAGTCTATCTCTGAAACTCCATGAAGACTTTTGCAGCCAGTTCCCACCAATATGCCCCAGACGTGAGACAAACAAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 90 bp GCAGTTATATCTGGCAACCGGCCATCATTCTGGCCCCAGCATGAATaGTACTCTGCTTGCTATTCTGCTAGTGATCAAACACGTCACTCA +
Preference number: 1 (lower is better)
Translates to: AVISGNRPSFWPQHE*YSACYSASDQTRHS
Trigger: TGAGTGACGTGTTTGATCACTAGCAGAATAGCAAGCAGAGTATCATTCATGCTGGGGCCAGAATGATGGCCGGTTGCCAGATATAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp AAGACTGTTCTAGTACCTACTTTGTATCCATCCTTCCAAGGGGTCTaGGGCTTCAGCTTGTTTGGAGAGTCAAAGGAAGTCCTGTGGAAG +
Preference number: 1 (lower is better)
Translates to: KTVLVPTLYPSFQGV*GFSLFGESKEVLWK
Trigger: CTTCCACAGGACTTCCTTTGACTCTCCAAACAAGCTGAAGCCCCAGACCCCTTGGAAGGATGGATACAAAGTAGGTACTAGAACAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp CGATTAGAAGAAAGATTCCCAAGCAGATCTAGCCTATGTGTAAGGTaGCTGCCCTGCTCCACTGTTTCTCTATCCCAACAGGAACCTTTC +
Preference number: 1 (lower is better)
Translates to: RLEERFPSRSSLCVR*LPCSTVSLSQQEPF
Trigger: GAAAGGTTCCTGTTGGGATAGAGAAACAGTGGAGCAGGGCAGCCACCTTACACATAGGCTAGATCTGCTTGGGAATCTTTCTTCTAATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 90 bp ACATGGCAGAGGGCTCAGGGTAGCTCTGAACACAGAGGTGACACCTaGGAAATACCATATTTGATGACAAAGACTGTTCTAGTACCTACT +
Preference number: 1 (lower is better)
Translates to: TWQRAQGSSEHRGDT*EIPYLMTKTVLVPT
Trigger: AGTAGGTACTAGAACAGTCTTTGTCATCAAATATGGTATTTCTCAGGTGTCACCTCTGTGTTCAGAGCTACCCTGAGCCCTCTGCCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 90 bp ACAGAAAAGAAATGTGGATCTAATGGTCAGCAACAGAGGAACGGCTaGCAAAAGGGTAATTGTCCACCTGCTGGATGGACATTTCTGTGG +
Preference number: 1 (lower is better)
Translates to: TEKKCGSNGQQQRNG*QKGNCPPAGWTFLW
Trigger: CCACAGAAATGTCCATCCAGCAGGTGGACAATTACCCTTTTGTCAGCCGTTCCTCTGTTGCTGACCATTAGATCCACATTTCTTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp TATCTCTTATTGTCTAACCCAACTCCCTACAGCCATTATCAAGCCTaGTTTCAGAATGTCCTGGTAGAGATGGACAGTGGAGTTTCCACC +
Preference number: 1 (lower is better)
Translates to: YLLLSNPTPYSHYQA*FQNVLVEMDSGVST
Trigger: GGTGGAAACTCCACTGTCCATCTCTACCAGGACATTCTGAAACCAGGCTTGATAATGGCTGTAGGGAGTTGGGTTAGACAATAAGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 90 bp CTCATATGGCATCTGTCCATTGCCTCTGGCCATGAGCAATTCTTGTaGGTCCAAAACCATTTGCCTCTGGTGAAGGTATTAAACCACATA +
Preference number: 1 (lower is better)
Translates to: LIWHLSIASGHEQFL*VQNHLPLVKVLNHI
Trigger: TATGTGGTTTAATACCTTCACCAGAGGCAAATGGTTTTGGACTCACAAGAATTGCTCATGGCCAGAGGCAATGGACAGATGCCATATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp GTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTaGCACAGATGTTCTCCTGGTTATACATTAATAAAAGGGCTTAGG +
Preference number: 1 (lower is better)
Translates to: VSHFLPNLSHKKSNR*HRCSPGYTLIKGLR
Trigger: CCTAAGCCCTTTTATTAATGTATAACCAGGAGAACATCTGTGCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp GAGGGCAGTGGGAAGAATTACAAAGGGGCACAAGAAAACTTCTGGTaGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCA +
Preference number: 1 (lower is better)
Translates to: EGSGKNYKGAQENFW*WYVHNLDVVMLSVS
Trigger: TGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCACCAGAAGTTTTCTTGTGCCCCTTTGTAATTCTTCCCACTGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp ACTTTAGTTTCAGGGGTACGTATGCAGGTTTGTTATGTAGTTAAATaGTGTGTCACAGGAGTTTGCTGTACAGATTATTTCGTCACTCAG +
Preference number: 1 (lower is better)
Translates to: TLVSGVRMQVCYVVK*CVTGVCCTDYFVTQ
Trigger: CTGAGTGACGAAATAATCTGTACAGCAAACTCCTGTGACACACCATTTAACTACATAACAAACCTGCATACGTACCCCTGAAACTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 90 bp AGTGGAATACTGCTTAGCAATAAAATGGAACAGATGACTGATCCATaGAAAGACGTGGATGAATCTCAAAATAATTATGCTGAGTACAAG +
Preference number: 1 (lower is better)
Translates to: SGILLSNKMEQMTDP*KDVDESQNNYAEYK
Trigger: CTTGTACTCAGCATAATTATTTTGAGATTCATCCACGTCTTTGCATGGATCAGTCATCTGTTCCATTTTATTGCTAAGCAGTATTCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 90 bp AAGCACACAATTGGCTTGAGAACATATCTTGAAATAAGACTCAACTaGTTATGTCTTCAGAAGTTTAACAGTGATACAACTTTGGCACGA +
Preference number: 1 (lower is better)
Translates to: KHTIGLRTYLEIRLN*LCLQKFNSDTTLAR
Trigger: TCGTGCCAAAGTTGTATCACTGTTAAACTTCTGAAGACATAACCAGTTGAGTCTTATTTCAAGATATGTTCTCAAGCCAATTGTGTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR TCA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGAGGCTCGCCCAGCAACTaGGAAACCAATCCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: AVWSVQPMRTPTARARARGSPSN*ETNPVC
Trigger: GCACACTGGATTGGTTTCTCAGTTGCTGGGCGAGCC...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR CCA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTCTTGCTGCCTTGCTaGCAAGACTTGCCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: SAPGSRLRRILPLGGSSAVLLPC*QDLPGH
Trigger: GTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGAC...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR-3UTR GCA 90 bp ACACCGGTAATCCCGACAGTTTGGAAGGCTGAGGTAGGTGGATCACTTGAGGTCAGTGGGCCAAGATCATaGCCCTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: TPVIPTVWKAEVGGSLEVSGPRS*PCTPAW
Trigger: CCAGGCTGGAGTGCAGGGGCATGATCTTGGCCCACT...GACCTCAAGTGATCCACCTACCTCAGCCTTCCAAACTGTCGGGATTACCGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR CCA 90 bp AGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGTTTCCTCCATGGGCTTaGATAGCAGGAAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: SPLPRGVPAITGDQLFPVFPPWA*IAGSLA
Trigger: AGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAA...CACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR-3UTR CCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAAATCCTTCCATTGGGTaGGTCCTCAGCAGTAACTTT +
Preference number: 2 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPNPSIG*VLSSNF
Trigger: AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATT...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR-3UTR CCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGTCTTGCTGCCTTGCTaGCAAGACTTGCCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSIVLLPC*QDLPGH
Trigger: GTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGAC...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR-3UTR CCA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTAATCCTTCCATTGGGTaGGTCCTCAGCAGTAACTTT +
Preference number: 2 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVNPSIG*VLSSNF
Trigger: AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATT...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR CAA 90 bp CACGAGAGGCCCCAGGCACCCAGCTGCTTACACACAAATCTGGACTaGGTGCTCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATT +
Preference number: 2 (lower is better)
Translates to: HERPQAPSCLHTNLD*VLWRCGQRFGVRAI
Trigger: AATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGAGCACCAAGTCCAGATTTGTGTGTAAGCAGCTGGGTGCCTGGGGCCTCTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CAA 90 bp CAAAAGAGGGCACCGACACCTCTCTTCACCTCTCTATGGCAACCGTaGCTGCCATGGAAACCACTGGGCATACACGGGGAGGGACAAATA +
Preference number: 2 (lower is better)
Translates to: QKRAPTPLFTSLWQP*LPWKPLGIHGEGQI
Trigger: TATTTGTCCCTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGGTGTCGGTGCCCTCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR GCA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGGAAGTCTTGCTGCCTTaGTGGCAAGACTTGCCCGGG +
Preference number: 2 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGEVLLP*WQDLPG
Trigger: CCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTC...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR-3UTR GCA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCCCCCAGGCACCCAGCTaGTTACACACAAATCTGGAC +
Preference number: 2 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGPQAPS*LHTNLD
Trigger: GTCCAGATTTGTGTGTAAGCAGCTGGGTGCCTGGGG...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR GCA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCAGCAGGAAGTCTTGCTaGCTTGCTGGCAAGACTTGC +
Preference number: 2 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGSRKSC*LAGKTC
Trigger: GCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCT...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR CCA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCCTGGACTTGGTGCTCTaGAGGTGTGGACAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGLDLVL*RCGQRF
Trigger: AAACCTCTGTCCACACCTCCAGAGCACCAAGTCCAG...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CAA 90 bp GCCTCTGTTCCTGGCCTCAGCCCTTTCTCATATGGCATCTGTCCATaGCCTCTGGCCATGAGCAATTCTTGTGAGTCCAAAACCATTTGC +
Preference number: 2 (lower is better)
Translates to: ASVPGLSPFSYGICP*PLAMSNSCESKTIC
Trigger: GCAAATGGTTTTGGACTCACAAGAATTGCTCATGGCCAGAGGCAATGGACAGATGCCATATGAGAAAGGGCTGAGGCCAGGAACAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR GCA 90 bp TCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAGAGAGGCAGCAAGGATAGCAGGAAGTCTTaGTGCCTTGCTGGCAAGACT +
Preference number: 2 (lower is better)
Translates to: SGGVDRGLELELFKRGSKDSRKS*CLAGKT
Trigger: AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATC...CTTGCTGCCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR TCA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATAGTGTGCTTCAGAGAGTaGGCTGGGGAGCAGGACGGA +
Preference number: 2 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIIVCFRE*AGEQDG
Trigger: TCCGTCCTGCTCCCCAGCTCACTCTCTGAAGCACAC...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR GCA 90 bp TCTGGACCAGGTAAAGGTCTACTAGCCATTGACAATGTGCATGACTTCAGTTCACCTGGGCTGTGGGGATaGGAGGAATACCCCATGAAT +
Preference number: 2 (lower is better)
Translates to: SGPGKGLLAIDNVHDFSSPGLWG*EEYPMN
Trigger: ATTCATGGGGTATTCCTCGCATCCCCACAGCCCAGG...TGAACTGAAGTCATGCACATTGTCAATGGCTAGTAGACCTTTACCTGGTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR CCA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCCCACTGGGTTCCAAATaGAGAGGCTCAGTAATATGT +
Preference number: 2 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGPLGSK*RGSVIC
Trigger: ACATATTACTGAGCCTCTCCATTTGGAACCCAGTGG...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR GCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCGAAGTCTTGCTGCCTTaGTGGCAAGACTTGCCCGGG +
Preference number: 2 (lower is better)
Translates to: RCRFLCTQMCITYVITSIEVLLP*WQDLPG
Trigger: CCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTC...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR CCA 90 bp GTGGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCATGATGATTGAGAGAGAGGCAGCATaGCCAGGCCTGATGGCTCAT +
Preference number: 2 (lower is better)
Translates to: VVVCSQSRCGNAFSFMMIEREAA*PGLMAH
Trigger: ATGAGCCATCAGGCCTGGCCATGCTGCCTCTCTCTC...AATCATCATGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR TCA 90 bp TCTGGACCAGGTAAAGGTCTACTAGCCATTGACAATGTGCATGACTTCAGTTCAATACTTGGAGCTACATaGCAATATGTCACAGGGGCC +
Preference number: 2 (lower is better)
Translates to: SGPGKGLLAIDNVHDFSSILGAT*QYVTGA
Trigger: GGCCCCTGTGACATATTGTCATGTAGCTCCAAGTAT...TGAACTGAAGTCATGCACATTGTCAATGGCTAGTAGACCTTTACCTGGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR TCA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGGTCAATAAAAAGCTGTaGGAAGAAGAAGGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRVNKKL*EEEGEE
Trigger: CTCTTCTCCTTCTTCTTCTCACAGCTTTTTATTGAC...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CAA 90 bp TGTATTACATATGTCATAACTTCTATCTCTCTAAACAGAAGAGATTaGCTCCAAAGCAGTTATATCTGGCAACCGGCCATCATTCTGGCC +
Preference number: 2 (lower is better)
Translates to: CITYVITSISLNRRD*LQSSYIWQPAIILA
Trigger: GGCCAGAATGATGGCCGGTTGCCAGATATAACTGCTTTGGAGCAAATCTCTTCTGTTTAGAGAGATAGAAGTTATGACATATGTAATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR TCA 90 bp GTGGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCATGATGATTAATTTCCTTTTGATTTaGCCTACTGCCTCCATGCAA +
Preference number: 2 (lower is better)
Translates to: VVVCSQSRCGNAFSFMMINFLLI*PTASMQ
Trigger: TTGCATGGAGGCAGTAGGTCAAATCAAAAGGAAATT...AATCATCATGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR CCA 90 bp GTGGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCATGATGATTGGAATACCCCATGAATaGCACAGTGAAAAACTAAGA +
Preference number: 2 (lower is better)
Translates to: VVVCSQSRCGNAFSFMMIGIPHE*HSEKLR
Trigger: TCTTAGTTTTTCACTGTGCCATTCATGGGGTATTCC...AATCATCATGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CAA 90 bp CTCGTCTTCAGTGAAATGATGTTCTTGTTCTGGTTCTTTAGTGAATaGCTGTCCACTTCTGCTAACGATGAGTGTCAAATAAAGAATATG +
Preference number: 2 (lower is better)
Translates to: LVFSEMMFLFWFFSE*LSTSANDECQIKNM
Trigger: CATATTCTTTATTTGACACTCATCGTTAGCAGAAGTGGACAGCAATTCACTAAAGAACCAGAACAAGAACATCATTTCACTGAAGACGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 72 bp GGACTTCTCACTGAGGCTCAAAGCAGGCTGAGCAGCTaGCAGCCTTCTACACAGGGCCTCTTCGGAGCCAGC +
Preference number: 3 (lower is better)
Translates to: GLLTEAQSRLSS*QPSTQGLFGAS
Trigger: GCTGGCTCCGAAGAGGCCCTGTGTAGAAGGCTGTCAGCTGCTCAGCCTGCTTTGAGCCTCAGTGAGAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 72 bp GGGCCCGAGCAAGATACCAGGCCTGCCATCCTGACATaGGTCAGCTCCTGTCGGAAGGACTTCTCACTGAGG +
Preference number: 3 (lower is better)
Translates to: GPEQDTRPAILT*VSSCRKDFSLR
Trigger: CCTCAGTGAGAAGTCCTTCCGACAGGAGCTGACTCATGTCAGGATGGCAGGCCTGGTATCTTGCTCGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 72 bp ACCCCAACAGCTAGGGCCCGAGCAAGATACCAGGCCTaGCATCCTGACATGAGTCAGCTCCTGTCGGAAGGA +
Preference number: 3 (lower is better)
Translates to: TPTARARARYQA*HPDMSQLLSEG
Trigger: TCCTTCCGACAGGAGCTGACTCATGTCAGGATGGCAGGCCTGGTATCTTGCTCGGGCCCTAGCTGTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR CAA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCGGAAGTCTTGCTGCCTaGCTGGCAAGACTTGCCCGG +
Preference number: 3 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSGSLAA*LARLAR
Trigger: CCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCC...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR-3UTR CAA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGGAAGTCTTGCTGCCTaGCTGGCAAGACTTGCCCGG +
Preference number: 3 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSGSLAA*LARLAR
Trigger: CCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCC...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR-3UTR CAA 90 bp AGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTTTCCTCCATGGGCTaGGATAGCAGGAAGTCTTGC +
Preference number: 3 (lower is better)
Translates to: SPLPRGVPAITGDQLFPVLSSMG*DSRKSC
Trigger: GCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG...CACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR-3UTR CAA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAAGAAGAATCCTTCCATaGGGTGGGTCCTCAGCAGTA +
Preference number: 3 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPRRILP*GGSSAV
Trigger: TACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR GCA 72 bp CGACACCTCTCTTCACCTCTCTATGGCAACCGTTGCTaGCATGGAAACCACTGGGCATACACGGGGAGGGAC +
Preference number: 3 (lower is better)
Translates to: RHLSSPLYGNRC*HGNHWAYTGRD
Trigger: GTCCCTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGGTGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 72 bp CACCGACACCTCTCTTCACCTCTCTATGGCAACCGTTaGTGCCATGGAAACCACTGGGCATACACGGGGAGG +
Preference number: 3 (lower is better)
Translates to: HRHLSSPLYGNR*CHGNHWAYTGR
Trigger: CCTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGGTGTCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 72 bp GGAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTaGGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: GDQLFPVLQGQG*EESFHWVGPQQ
Trigger: CTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR CCA 72 bp GGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTaGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGA +
Preference number: 3 (lower is better)
Translates to: GWVLSSNFPPWA*IAGSLAALLAR
Trigger: TCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR TCA 72 bp TGGCTAAGACGTAAGCAGTATGGTCAGTGCAACCCATaGGAACCCCAACAGCTAGGGCCCGAGCAAGATACC +
Preference number: 3 (lower is better)
Translates to: WLRRKQYGQCNP*EPQQLGPEQDT
Trigger: GGTATCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGCTTACGTCTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 72 bp GAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTaGTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATT +
Preference number: 3 (lower is better)
Translates to: ESQPSQETSCSQ*SRVKAEKNPSI
Trigger: AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR CCA 72 bp TCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATaGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTG +
Preference number: 3 (lower is better)
Translates to: SIGWVLSSNFPP*AWIAGSLAALL
Trigger: CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
3UTR CCA 72 bp TGTGCTTCAGAGAGTGAGCTGGGGAGCAGGACGGAATaGCTAAGACGTAAGCAGTATGGTCAGTGCAACCCA +
Preference number: 3 (lower is better)
Translates to: CASESELGSRTE*LRRKQYGQCNP
Trigger: TGGGTTGCACTGACCATACTGCTTACGTCTTAGCCATTCCGTCCTGCTCCCCAGCTCACTCTCTGAAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp CCTCTCTTCACCTCTCTATGGCAACCGTTGCTGCCATaGAAACCACTGGGCATACACGGGGAGGGACAAATA +
Preference number: 3 (lower is better)
Translates to: PLFTSLWQPLLP*KPLGIHGEGQI
Trigger: TATTTGTCCCTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp CAAAAGAGGGCACCGACACCTCTCTTCACCTCTCTATaGCAACCGTTGCTGCCATGGAAACCACTGGGCATA +
Preference number: 3 (lower is better)
Translates to: QKRAPTPLFTSL*QPLLPWKPLGI
Trigger: TATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGGTGTCGGTGCCCTCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 72 bp AGGCACCCAGCTGCTTACACACAAATCTGGACTTGGTaGTCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAG +
Preference number: 3 (lower is better)
Translates to: RHPAAYTQIWTW*SGGVDRGLELE
Trigger: CTCTAACTCCAAACCTCTGTCCACACCTCCAGAGCACCAAGTCCAGATTTGTGTGTAAGCAGCTGGGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 72 bp TTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTaGCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTA +
Preference number: 3 (lower is better)
Translates to: LDCAGHFSWARM*PALQHGIKKEV
Trigger: TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
3UTR CCA 72 bp CCTCTCTATGGCAACCGTTGCTGCCATGGAAACCACTaGGCATACACGGGGAGGGACAAATACTGGTGTTTA +
Preference number: 3 (lower is better)
Translates to: PLYGNRCCHGNH*AYTGRDKYWCL
Trigger: TAAACACCAGTATTTGTCCCTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 72 bp CTAATAATCTCACTAATGCTCCCCAGTGTCCAGCCATaGTCCCTGTTCTTCCTAACATCCACCTTCAGGCCT +
Preference number: 3 (lower is better)
Translates to: LIISLMLPSVQP*SLFFLTSTFRP
Trigger: AGGCCTGAAGGTGGATGTTAGGAAGAACAGGGAGCATGGCTGGACACTGGGGAGCATTAGTGAGATTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp CCCAGCTGCTTACACACAAATCTGGACTTGGTGCTCTaGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATT +
Preference number: 3 (lower is better)
Translates to: PSCLHTNLDLVL*RCGQRFGVRAI
Trigger: AATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGAGCACCAAGTCCAGATTTGTGTGTAAGCAGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp CTTCAGTTCAGTTACAAGCTCCCAACAGATCCCTTGTaGAAGTCAGCTACACAGAATACCAGAGAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: LQFSYKLPTDPL*KSATQNTRELG
Trigger: CCCCAGCTCTCTGGTATTCTGTGTAGCTGACTTCCACAAGGGATCTGTTGGGAGCTTGTAACTGAACTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp GAAAGATTCCCAAGCAGATCTAGCCTATGTGTAAGGTaGCTGCCCTGCTCCACTGTTTCTCTATCCCAACAG +
Preference number: 3 (lower is better)
Translates to: ERFPSRSSLCVR*LPCSTVSLSQQ
Trigger: CTGTTGGGATAGAGAAACAGTGGAGCAGGGCAGCCACCTTACACATAGGCTAGATCTGCTTGGGAATCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR CAA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTAGAAGAATCCTTCCATaGGGTGGGTCCTCAGCAGTA +
Preference number: 3 (lower is better)
Translates to: LEPALSGRCRFLCTQMCIRRILP*GGSSAV
Trigger: TACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 72 bp TCTGGCAACCGGCCATCATTCTGGCCCCAGCATGAATaGTACTCTGCTTGCTATTCTGCTAGTGATCAAACA +
Preference number: 3 (lower is better)
Translates to: SGNRPSFWPQHE*YSACYSASDQT
Trigger: TGTTTGATCACTAGCAGAATAGCAAGCAGAGTATCATTCATGCTGGGGCCAGAATGATGGCCGGTTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 72 bp AAATGTGGATCTAATGGTCAGCAACAGAGGAACGGCTaGCAAAAGGGTAATTGTCCACCTGCTGGATGGACA +
Preference number: 3 (lower is better)
Translates to: KCGSNGQQQRNG*QKGNCPPAGWT
Trigger: TGTCCATCCAGCAGGTGGACAATTACCCTTTTGTCAGCCGTTCCTCTGTTGCTGACCATTAGATCCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 72 bp AAGATAACGGCAGAAAACAAGCCAGATAAAAATCTGTaGCATCAGAGAGCTTACATGGCAGAGGGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: KITAENKPDKNL*HQRAYMAEGSG
Trigger: CCCTGAGCCCTCTGCCATGTAAGCTCTCTGATGGCACAGATTTTTATCTGGCTTGTTTTCTGCCGTTATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp AAAGTCCTTGTTTGTCTCACGTCTGGGGCATATTGGTaGGAACTGGCTGCAAAAGTCTTCATGGAGTTTCAG +
Preference number: 3 (lower is better)
Translates to: KVLVCLTSGAYW*ELAAKVFMEFQ
Trigger: CTGAAACTCCATGAAGACTTTTGCAGCCAGTTCCCACCAATATGCCCCAGACGTGAGACAAACAAGGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 72 bp CATCTGTCCATTGCCTCTGGCCATGAGCAATTCTTGTaGGTCCAAAACCATTTGCCTCTGGTGAAGGTATTA +
Preference number: 3 (lower is better)
Translates to: HLSIASGHEQFL*VQNHLPLVKVL
Trigger: TAATACCTTCACCAGAGGCAAATGGTTTTGGACTCACAAGAATTGCTCATGGCCAGAGGCAATGGACAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 72 bp CTTTCTCATATGGCATCTGTCCATTGCCTCTGGCCATaGGCAATTCTTGTGAGTCCAAAACCATTTGCCTCT +
Preference number: 3 (lower is better)
Translates to: LSHMASVHCLWP*AILVSPKPFAS
Trigger: AGAGGCAAATGGTTTTGGACTCACAAGAATTGCTCATGGCCAGAGGCAATGGACAGATGCCATATGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR GCA 72 bp TTGTCTCACGTCTGGGGCATATTGGTGGGAACTGGCTaGAAAAGTCTTCATGGAGTTTCAGAGATAGACTTT +
Preference number: 3 (lower is better)
Translates to: LSHVWGILVGTG*KSLHGVSEIDF
Trigger: AAAGTCTATCTCTGAAACTCCATGAAGACTTTTGCAGCCAGTTCCCACCAATATGCCCCAGACGTGAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp GAGGGTCTAGAAATCCCAACTCCACTGGGTTCCAAATaGAGAGGCTCAGTAATATGTCCATTACCACATTCT +
Preference number: 3 (lower is better)
Translates to: EGLEIPTPLGSK*RGSVICPLPHS
Trigger: AGAATGTGGTAATGGACATATTACTGAGCCTCTCCATTTGGAACCCAGTGGAGTTGGGATTTCTAGACCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 72 bp AGGGCTCAGGGTAGCTCTGAACACAGAGGTGACACCTaGGAAATACCATATTTGATGACAAAGACTGTTCTA +
Preference number: 3 (lower is better)
Translates to: RAQGSSEHRGDT*EIPYLMTKTVL
Trigger: TAGAACAGTCTTTGTCATCAAATATGGTATTTCTCAGGTGTCACCTCTGTGTTCAGAGCTACCCTGAGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp AAAAGCACTGTATTAAATCTTAGAACCAGCTCTGTCTaGCAGGTGCCGGTTTCTGTGTACACAGATGTGTAT +
Preference number: 3 (lower is better)
Translates to: KSTVLNLRTSSV*QVPVSVYTDVY
Trigger: ATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAAGATTTAATACAGTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp GGCTTTGACTTCAAAACAAGCCCACTGAAGTTGCCTTaGGATAATAACCAGGGCAGAAGTAAAGATAATGTC +
Preference number: 3 (lower is better)
Translates to: GFDFKTSPLKLP*DNNQGRSKDNV
Trigger: GACATTATCTTTACTTCTGCCCTGGTTATTATCCCAAGGCAACTTCAGTGGGCTTGTTTTGAAGTCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR-3UTR CAA 90 bp AGGCAATGCATACACAAATCTTTTGAAAAGTGTAAGTGTCTCAGATATTGTGTGGGTGTGGACAGAGGTTaGGAGTTAGAGCTATTCAAG +
Preference number: 3 (lower is better)
Translates to: RQCIHKSFEKCKCLRYCVGVDRG*ELELFK
Trigger: CTTGAATAGCTCTAACTCCAAACCTCTGTCCACACC...CACACAATATCTGAGACACTTACACTTTTCAAAAGATTTGTGTATGCATTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp TTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTaGCACAGATGTTCTCCTGGTTATACATTAATAAAA +
Preference number: 3 (lower is better)
Translates to: FLPNLSHKKSNR*HRCSPGYTLIK
Trigger: TTTTATTAATGTATAACCAGGAGAACATCTGTGCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp TCAGGGGTACGTATGCAGGTTTGTTATGTAGTTAAATaGTGTGTCACAGGAGTTTGCTGTACAGATTATTTC +
Preference number: 3 (lower is better)
Translates to: SGVRMQVCYVVK*CVTGVCCTDYF
Trigger: GAAATAATCTGTACAGCAAACTCCTGTGACACACCATTTAACTACATAACAAACCTGCATACGTACCCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp AAGAATTACAAAGGGGCACAAGAAAACTTCTGGTGGTaGTATGTTCACAATCTCGATGTGGTAATGCTTTCA +
Preference number: 3 (lower is better)
Translates to: KNYKGAQENFWW*YVHNLDVVMLS
Trigger: TGAAAGCATTACCACATCGAGATTGTGAACATACCACCACCAGAAGTTTTCTTGTGCCCCTTTGTAATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR TCA 72 bp TTCCATATGATCCAGCTATCCTACTCCCAAAAGAAATaGAAGTTCATGTCCATACAAGGATTCATATGCAAA +
Preference number: 3 (lower is better)
Translates to: FHMIQLSYSQKK*KFMSIQGFICK
Trigger: TTTGCATATGAATCCTTGTATGGACATGAACTTTCATTTCTTTTGGGAGTAGGATAGCTGGATCATATGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CCA 72 bp TTCTCTATCCCAACAGGAACCTTTCCTTTTGTTTCTTaGTTTTCGTTTGTTTGTTTGTTTCTGAGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: FSIPTGTFPFVS*FSFVCLFLSLL
Trigger: AAGCAAACTCAGAAACAAACAAACAAACGAAAACCAAGAAACAAAAGGAAAGGTTCCTGTTGGGATAGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp CCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCAACGGAGCCCGGGCGGTaGCAGGGAGCGAGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: PPARSPSHHRRPVVPSAPTEPGR*QGASVN
Trigger: GTTGACACTCGCTCCCTGCCACCGCCCGGGCTCCGT...TGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTACTGGGGAGCGGGGACTaGGCCCGGAACACCGACGGG +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVLGSGD*ARNTDG
Trigger: CCCGTCGGTGTTCCGGGCTCAGTCCCCGCTCCCCAG...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR TCA 90 bp AGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGTCACCCGGATGCGCCTaGTATTCAGCTCCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: SPLPRGVPAITGDQLFPVSPGCA*YSAPVR
Trigger: CCGGACGGGAGCTGAATATCAGGCGCATCCGGGTGA...CACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTAGGAGCTAAGGGGCTGTaGGCTGCGGCCGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVGAKGL*AAAGAG
Trigger: TCCAGCGCCGGCCGCAGCTCACAGCCCCTTAGCTCC...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp AGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTCAGTCTTCTAAGGGCTaGCTGTGGCCGACGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSAVPSREESQPSQETSCQSSKG*LWPTER
Trigger: CCTCTCCGTCGGCCACAGCCAGCCCTTAGAAGACTG...ACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCCAGAGCTCCCGGCCTaGGGATATGCTGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: REAARAIAAQSPPARSPSPELPA*GYAGVL
Trigger: GAGAACACCAGCATATCCCCAGGCCGGGAGCTCTGG...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGGCTCGCCCAGCAACTaGGAAACCAATCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPGSPSN*ETNPVC
Trigger: GCACACTGGATTGGTTTCTCAGTTGCTGGGCGAGCC...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCTTTCACGAAGTTGCCTaGATACCCGGCCACGTGCGC +
Preference number: 4 (lower is better)
Translates to: REAARAIAAQSPPARSPSFHEVA*IPGHVR
Trigger: GCGCACGTGGCCGGGTATGCAGGCAACTTCGTGAAA...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp TGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCAGCTCCCGTCCGGGGTTaGGGGGTTGAGACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: WAWIAGSLAALLARLARAAPVRG*GVETGS
Trigger: GCTACCTGTCTCAACCCCGCAACCCCGGACGGGAGC...TGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTAGCCATCCCGACACTTaGGAAACCAGAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVSHPDT*ETRAPG
Trigger: GCCGGGAGCTCTGGTTTCGCAAGTGTCGGGATGGCT...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCACTTGCTGGCAAGACTTaGCCGGGCACCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PPARSPSHHRRPVVPSAPLAGKT*PGTLRE
Trigger: TTCCCTGAGGGTGCCCGGGCAAGTCTTGCCAGCAAG...TGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGAACGGAGCCCGGGCGGTaGCAGGGAGCGAGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: AVWSVQPMRTPTARARARTEPGR*QGASVN
Trigger: GTTGACACTCGCTCCCTGCCACCGCCCGGGCTCCGT...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCTGGAAAATGAAAACTTaGCGGCACGGAGCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: REAARAIAAQSPPARSPSWKMKT*RHGARA
Trigger: CGCCCGGGCTCCGTGCCGCCAAGTTTTCATTTTCCA...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCACCCTCCCAGGTGAGCTaGATCTTCAAGAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPPSQVS*IFKRSP
Trigger: GGGAGACCTCTTGAAGATCCAGCTCACCTGGGAGGG...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCATGCCATGGAAACCACTaGGCATACACGGGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPCHGNH*AYTGRD
Trigger: GTCCCTCCCCGTGTATGCCCAGTGGTTTCCATGGCA...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGAGAGAGAGGCAGCATaGCCAGGCCTGATGGCTCAT +
Preference number: 4 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPEREAA*PGLMAH
Trigger: ATGAGCCATCAGGCCTGGCCATGCTGCCTCTCTCTC...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAGGTCTATCCGCTCCCTaGGCCGGGAGTCCGTCGGGG +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRGLSAP*AGSPSG
Trigger: CCCCGACGGACTCCCGGCCCAGGGAGCGGATAGACC...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR TCA 90 bp GGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACCAGGCCCCCTCCCAGGTaGGCTGGATCTTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLDSRKSCCLAGKTCPGTRPPPR*AGSSRG
Trigger: ACCTCTTGAAGATCCAGCTCACCTGGGAGGGGGCCT...GGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCGGTGGGAGGACCACCTaGGCCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSGGRTT*AQEAEV
Trigger: AACCTCTGCCTCCTGGGCTCAGGTGGTCCTCCCACC...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTCGAGTGTCAACGGCTTaGCCCAGAACGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVRVSTA*PRTRSA
Trigger: GGCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCG...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCATTTCACGAAGTTGCCTaGATACCCGGCCACGTGCGC +
Preference number: 4 (lower is better)
Translates to: PPARSPSHHRRPVVPSAPFHEVA*IPGHVR
Trigger: GCGCACGTGGCCGGGTATGCAGGCAACTTCGTGAAA...TGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGAAGTCTTGCTGCCTTaGTGGCAAGACTTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVEVLLP*WQDLPG
Trigger: CCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTC...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCAGAAACCAATCCAGTGTaGACGAGAGGCCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PPARSPSHHRRPVVPSAPETNPV*TRGPRH
Trigger: GTGCCTGGGGCCTCTCGTGCACACTGGATTGGTTTC...TGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGCTCTGTCTGGCAGGTaGCGGTTTCTGTGTACACAG +
Preference number: 4 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPALSGR*RFLCTQ
Trigger: CTGTGTACACAGAAACCGGCACCTGCCAGACAGAGC...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCGCCCGGAACAGGTCCTaGCCCTGCCTGGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLARNRS*PCLGRE
Trigger: TTCCCTCCCCAGGCAGGGGCAGGACCTGTTCCGGGC...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp AGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGTTCCAGCCGTCCCTCTaGACCAAAAGGTACGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPLPRGVPAITGDQLFPVFQPSL*TKRYGA
Trigger: AGCCCCGTACCTTTTGGTCCAGAGGGACGGCTGGAA...CACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCGTTGAGTCCACAGCCTaGCTGGAAGTCACCCCCATT +
Preference number: 4 (lower is better)
Translates to: REAARAIAAQSPPARSPSVESTA*LEVTPI
Trigger: AATGGGGGTGACTTCCAGCCAGGCTGTGGACTCAAC...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTCCCTCCCAGGTGAGCTaGATCTTCAAGAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVPSQVS*IFKRSP
Trigger: GGGAGACCTCTTGAAGATCCAGCTCACCTGGGAGGG...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGCCCCAGAACGAGATCTaGCCTCGTCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGPQNEI*PRPEPP
Trigger: CGGCGGCTCAGGACGAGGGCAGATCTCGTTCTGGGG...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTCGGAGTTGCTCATCCTaGCCCGCCACACCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LSSMGLDSRKSCCLAGKTRSCSS*PATPPP
Trigger: GGGAGGGGGTGTGGCGGGGCAGGATGAGCAACTCCG...AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGGCTCCCGTCCGGGGTTaGGGGGTTGAGACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGAPVRG*GVETGS
Trigger: GCTACCTGTCTCAACCCCGCAACCCCGGACGGGAGC...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCGCCAACAACCACTaGGGACGCAGGGCGGGTACG +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLCANNH*GRRAGT
Trigger: CGTACCCGCCCTGCGTCCGCAGTGGTTGTTGGCGCA...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCAGACCAGGAAGGTGTTaGTGGCATTCTGCTCGATCC +
Preference number: 4 (lower is better)
Translates to: REAARAIAAQSPPARSPSRPGRC*WHSARS
Trigger: GGATCGAGCAGAATGCCACCAACACCTTCCTGGTCT...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCGTCTGCGTCTGGCGCTaGGGAGCGGGGACTGAGCCC +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAVCVWR*GAGTEP
Trigger: GGGCTCAGTCCCCGCTCCCCAGCGCCAGACGCAGAC...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCCCCGGAGTCTGCGTCTaGCGCTGGGGAGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAPGVCV*RWGAGT
Trigger: AGTCCCCGCTCCCCAGCGCCAGACGCAGACTCCGGG...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR TCA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGGATCTGCCCTCGTCCTaGGCCGCCGGGAGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGDLPSS*AAGRQG
Trigger: TCCTTGCCTCCCGGCGGCTCAGGACGAGGGCAGATC...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp AGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTAGAGAAGGTGGAAAATaGAAACTTGGCGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: SSAVPSREESQPSQETSCREGGK*KLGGTE
Trigger: CTCCGTGCCGCCAAGTTTTCATTTTCCACCTTCTCT...ACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp AGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTGACAGATCCCCTTTTTaGAGCGATTGGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SSAVPSREESQPSQETSCDRSPF*SDWSQC
Trigger: GCACTGACTCCAATCGCTTCAAAAAGGGGATCTGTC...ACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGAAGCAGGCTGAGCAGCTaGCAGCCTTCTACACAGGGC +
Preference number: 4 (lower is better)
Translates to: AVWSVQPMRTPTARARARSRLSS*QPSTQG
Trigger: GCCCTGTGTAGAAGGCTGTCAGCTGCTCAGCCTGCT...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTTTCCTTTCACGAAGTTaGCTGCATACCCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVFLSRS*LHTRPR
Trigger: ACGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAA...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp TGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACCAAGATCATGCCCCTaGACTCCAGCCTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: WAWIAGSLAALLARLARAPRSCP*TPAWAT
Trigger: TGTAGCCCAGGCTGGAGTGCAGGGGCATGATCTTGG...TGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTAAGCTGGAGAGACCTGTaGGAGGAAACCGAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVSWRDL*EETEPE
Trigger: CTCCGGCTCGGTTTCCTCGCACAGGTCTCTCCAGCT...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR GCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTACACCGACGGGGCGGCTaGGCCAACAACCACTGCGGA +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVHRRGG*ANNHCG
Trigger: TCCGCAGTGGTTGTTGGCGCAGCCGCCCCGTCGGTG...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR GCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAGAGGGCCGCAACAGGTaGAGAAGGCGCGGCCGCACA +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVEGRNR*RRRGRT
Trigger: TGTGCGGCCGCGCCTTCTGCACCTGTTGCGGCCCTC...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR GCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGATCCTCCTCTCCCCACTaGCATCCCAAGTGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRSSSPH*HPKWRR
Trigger: CCTCCGCCACTTGGGATGGCAGTGGGGAGAGGAGGA...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCACGGAGCCCGGGCGGTaGCAGGGAGCGAGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRATEPGR*QGASVN
Trigger: GTTGACACTCGCTCCCTGCCACCGCCCGGGCTCCGT...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR CCA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGAGGCGGAGGTTGCAGTaGGCCAAGATCATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPRRRLQ*AKIMPL
Trigger: CAGGGGCATGATCTTGGCCCACTGCAACCTCCGCCT...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCAAACTCGGCTTGTCCTaGTTCACCAGAGAGTCAACA +
Preference number: 4 (lower is better)
Translates to: REAARAIAAQSPPARSPSKLGLS*FTREST
Trigger: TGTTGACTCTCTGGTGAATCAGGACAAGCCGAGTTT...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp ATGAGTCAGCTCCTGTCGGAAGGACTTCTCACTGAGGCTCAAAGCAGGCTGAGCAGTTCGAACCCAGCCTaGCCAGCCTGGCCAACATGG +
Preference number: 4 (lower is better)
Translates to: MSQLLSEGLLTEAQSRLSSSNPA*PAWPTW
Trigger: CCATGTTGGCCAGGCTGGTCAGGCTGGGTTCGAACT...GCTCAGCCTGCTTTGAGCCTCAGTGAGAAGTCCTTCCGACAGGAGCTGACTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGCTGGTCTCGCACTCCTaGCCTCGTGATCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGLVSHS*PRDPPI
Trigger: GATGGGAGGATCACGAGGTCAGGAGTGCGAGACCAG...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGACCCAGTGTCTGCCGATaGGCACTCACTCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRPSVCR*ALTPWR
Trigger: TCGCCAAGGAGTGAGTGCTCATCGGCAGACACTGGG...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR GCA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGCGGAGTTGCTCATCCTaGCCCGCCACACCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRRSCSS*PATPPP
Trigger: GGGAGGGGGTGTGGCGGGGCAGGATGAGCAACTCCG...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCCGGAGTTGCTCATCCTaGCCCGCCACACCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFRSCSS*PATPPP
Trigger: GGGAGGGGGTGTGGCGGGGCAGGATGAGCAACTCCG...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR GCA 90 bp AGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGTGGACGGCTCGCTCATaGTCACATTTTACCACCTCT +
Preference number: 4 (lower is better)
Translates to: SPLPRGVPAITGDQLFPVWTARS*SHFTTS
Trigger: AGAGGTGGTAAAATGTGAGCATGAGCGAGCCGTCCA...CACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCACCCGGCCTGGGGATATaGTGGTGTTCTCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSPGLGI*WCSQGL
Trigger: AAGACCCTGAGAACACCAGCATATCCCCAGGCCGGG...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGGATAACTCTGCTCCCTaGTGCCCCAGCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGDNSAP*CPSWPL
Trigger: CAGAGGCCAGCTGGGGCAGCAGGGAGCAGAGTTATC...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGTGGAAAATGAAAACTTaGCGGCACGGAGCCCGGGCG +
Preference number: 4 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPWKMKT*RHGARA
Trigger: CGCCCGGGCTCCGTGCCGCCAAGTTTTCATTTTCCA...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGCATCCTTCATGCTCTaGGTCCTTGGAGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPASFML*VLGGAE
Trigger: CTCCGCACCTCCAAGGACCCAGAGCATGAAGGATGC...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGACAGTCTTCTAAGGGCTaGCTGTGGCCGACGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRQSSKG*LWPTER
Trigger: CCTCTCCGTCGGCCACAGCCAGCCCTTAGAAGACTG...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCACCAGAGCTCCCGGCCTaGGGATATGCTGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SAPGSRLRRILPLGGSSAPELPA*GYAGVL
Trigger: GAGAACACCAGCATATCCCCAGGCCGGGAGCTCTGG...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCAGGGAAGCTCCACAGTaGGACTGGTTTCGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: REAARAIAAQSPPARSPSREAPQ*DWFRFS
Trigger: TGAAAAACGAAACCAGTCCCACTGTGGAGCTTCCCT...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCAGGGTCACAACCGTTGCTGCCATaGAAACCACTGGGCATACAC +
Preference number: 4 (lower is better)
Translates to: ARSPSHHRRPVVPSAPGSQPLLP*KPLGIH
Trigger: GTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTG...TGACCCTGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGCGTGCAGACTCGTCTaGGCTGAGATAATTAGCAAA +
Preference number: 4 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPACRLV*AEIISK
Trigger: TTTGCTAATTATCTCAGCCCAGACGAGTCTGCACGC...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCGGCGCTCTCCTACGGTaGGGTGGAGGGCTACGGGAA +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAGALLR*GGGLRE
Trigger: TTCCCGTAGCCCTCCACCCCACCGTAGGAGAGCGCC...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATGGGGAGGCGATCCCTaGAGAAGGAGAGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVWGGDP*RRRASS
Trigger: AGAGGATGCTCTCCTTCTCCAGGGATCGCCTCCCCA...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
3UTR CAA 72 bp GCACCGACACCTCTCTTCACCTCTCTATGGCAACCGTaGCTGCCATGGAAACCACTGGGCATACACGGGGAG +
Preference number: 4 (lower is better)
Translates to: APTPLFTSLWQP*LPWKPLGIHGE
Trigger: CTCCCCGTGTATGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAGAGGTGTCGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATCTTGTGTGCAGGGCTaGCACGAGTTTGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVSCVQG*HEFVQP
Trigger: TGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGA...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATGGCCCACAGGCATCTaGATACCAATGCTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVWPTGI*IPMLKP
Trigger: CGGCTTGAGCATTGGTATTCAGATGCCTGTGGGCCA...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp GGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACCGCTTCTCCATTCCAGTaGGATAACCCTGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GLDSRKSCCLAGKTCPGTASPFQ*DNPASV
Trigger: AACAGAGGCAGGGTTATCTCACTGGAATGGAGAAGC...GGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAACTGAAGGTTACCTCTaGAAGGCATGCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRTEGYL*KACLPG
Trigger: CCCGGGCAGGCATGCCTTTCAGAGGTAACCTTCAGT...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCACTGAAGGTTACCTCTaGAAGGCATGCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLTEGYL*KACLPG
Trigger: CCCGGGCAGGCATGCCTTTCAGAGGTAACCTTCAGT...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp AGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCCCAGAACGAGATCTaGCCTCGTCCTGAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RVKAEKNPSIGWVLSSNFPQNEI*PRPEPP
Trigger: CGGCGGCTCAGGACGAGGGCAGATCTCGTTCTGGGG...AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCACGAGTGTCAACGGCTTaGCCCAGAACGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: SAPGSRLRRILPLGGSSARVSTA*PRTRSA
Trigger: GGCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCG...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGGAAGTCTTGCTGCCTTaGTGGCAAGACTTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGEVLLP*WQDLPG
Trigger: CCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTC...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCATTGGTGGGAACTGGCTaGAAAAGTCTTCATGGAGTT +
Preference number: 4 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPLVGTG*KSLHGV
Trigger: AACTCCATGAAGACTTTTGCAGCCAGTTCCCACCAA...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGAGAGGCTGAGAGGCTaGGTCCCGCCATCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRERLRG*VPPSSL
Trigger: GAGGCTGGATGGCGGGACGCAGCCTCTCAGCCTCTC...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR GCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTACCAGCTTTCTCCCACTaGCCTCCTCCGGACACCCAG +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVPAFSH*PPPDTQ
Trigger: CTGGGTGTCCGGAGGAGGGCAGTGGGAGAAAGCTGG...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp CCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCATGGAGGCAGAGAAGGTaGAAAATGAAAACTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PPARSPSHHRRPVVPSAPWRQRR*KMKTWR
Trigger: CCGCCAAGTTTTCATTTTCCACCTTCTCTGCCTCCA...TGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTTCCAGCCGTCCCTCTaGACCAAAAGGTACGGGGCT +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGFQPSL*TKRYGA
Trigger: AGCCCCGTACCTTTTGGTCCAGAGGGACGGCTGGAA...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTTCCAGCCGTCCCTCTaGACCAAAAGGTACGGGGCT +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLFQPSL*TKRYGA
Trigger: AGCCCCGTACCTTTTGGTCCAGAGGGACGGCTGGAA...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR CCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCGCATCCTTCATGCTCTaGGTCCTTGGAGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLASFML*VLGGAE
Trigger: CTCCGCACCTCCAAGGACCCAGAGCATGAAGGATGC...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAGCCAGTCGAGCATCCTaGCAATGCTGTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRASRAS*QCCVPP
Trigger: TGGTGGGACACAGCATTGCCAGGATGCTCGACTGGC...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCGGAGAGAGCCTCTTGTaGATGTCGGCCCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSGESLL*MSAPSN
Trigger: GTTTGAAGGGGCCGACATCCACAAGAGGCTCTCTCC...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCCCAGGAAGGTGTTGGTaGCATTCTGCTCGATCCGCT +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSPGRCW*HSARSA
Trigger: AGCGGATCGAGCAGAATGCCACCAACACCTTCCTGG...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp TGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACTGGACTTGGTGCTCTaGAGGTGTGGACAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: WAWIAGSLAALLARLARALDLVL*RCGQRF
Trigger: AAACCTCTGTCCACACCTCCAGAGCACCAAGTCCAG...TGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGTTTCTGGCTTTCCATTaGCTGGTAGGGGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPFLAFH*LVGDPW
Trigger: CCAGGGGTCCCCTACCAGCCAATGGAAAGCCAGAAA...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTTGTCCACCTGCTGGATaGACATTTCTGTGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVCPPAG*TFLWPF
Trigger: AAAAGGCCACAGAAATGTCCATCCAGCAGGTGGACA...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAAGCGGAGGGAGAACTTaGCCCGGAGTCTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVSGGRT*PGVCVW
Trigger: CCAGACGCAGACTCCGGGCCAAGTTCTCCCTCCGCT...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR TCA 90 bp ATGAGTCAGCTCCTGTCGGAAGGACTTCTCACTGAGGCTCAAAGCAGGCTGAGCTGGCCCACAGGCATCTaGATACCAATGCTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: MSQLLSEGLLTEAQSRLSWPTGI*IPMLKP
Trigger: CGGCTTGAGCATTGGTATTCAGATGCCTGTGGGCCA...GCTCAGCCTGCTTTGAGCCTCAGTGAGAAGTCCTTCCGACAGGAGCTGACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGATGGCCCACAGGCATCTaGATACCAATGCTCAAGCCG +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRWPTGI*IPMLKP
Trigger: CGGCTTGAGCATTGGTATTCAGATGCCTGTGGGCCA...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCGATAATGGTAAACTCTaGAAGGCATGCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSDNGKL*KACLPG
Trigger: CCCGGGCAGGCATGCCTTTCAGAGTTTACCATTATC...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCAGGCCCCCTCCCAGGTaGGCTGGATCTTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGRPPPR*AGSSRG
Trigger: ACCTCTTGAAGATCCAGCTCACCTGGGAGGGGGCCT...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTAGGTTGTACCAAGACTaGGAGGCCCCCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSIRLYQD*EAPSQV
Trigger: CACCTGGGAGGGGGCCTCTCAGTCTTGGTACAACCT...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp AAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATCACCCGGATGCGCCTaGTATTCAGCTCCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: KAEKNPSIGWVLSSNFPPSPGCA*YSAPVR
Trigger: CCGGACGGGAGCTGAATATCAGGCGCATCCGGGTGA...TGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp ACACCGGTAATCCCGACAGTTTGGAAGGCTGAGGTAGGTGGATCACTTGAGGTCCCTGCCATCCTGACATaGGTCAGCTCCTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: TPVIPTVWKAEVGGSLEVPAILT*VSSCRK
Trigger: CTTCCGACAGGAGCTGACTCATGTCAGGATGGCAGG...GACCTCAAGTGATCCACCTACCTCAGCCTTCCAAACTGTCGGGATTACCGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCAAGGTCGAGGCTGCAGTaGGCAGTGATGGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: KAEKNPSIGWVLSSNFPPRSRLQ*AVMAPP
Trigger: TGGTGGCGCCATCACTGCTCACTGCAGCCTCGACCT...TGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCATTCCTTTCACGAAGTTaGCTGCATACCCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSFLSRS*LHTRPR
Trigger: ACGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAA...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp ACACCGGTAATCCCGACAGTTTGGAAGGCTGAGGTAGGTGGATCACTTGAGGTCCCCGGCCTGGGGATATaGTGGTGTTCTCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: TPVIPTVWKAEVGGSLEVPGLGI*WCSQGL
Trigger: AAGACCCTGAGAACACCAGCATATCCCCAGGCCGGG...GACCTCAAGTGATCCACCTACCTCAGCCTTCCAAACTGTCGGGATTACCGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGCAGGAAGTCTTGCTaGCTTGCTGGCAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSSRKSC*LAGKTC
Trigger: GCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCT...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp TGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCAGATAGCAGGAAGTCTTaGTGCCTTGCTGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: WAWIAGSLAALLARLARADSRKS*CLAGKT
Trigger: AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATC...TGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGACCAGTTGTTCCCAGTaGTCCAGGGTCAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGTSCSQ*SRVKAE
Trigger: CTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGT...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGCAAGATACCAGGCCTaGCATCCTGACATGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPARYQA*HPDMSQ
Trigger: CTGACTCATGTCAGGATGGCAGGCCTGGTATCTTGC...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGGGGTGAGCCACCGTaGCCACCCAGGATTTTATTT +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSRGEPP*PPRILF
Trigger: AAATAAAATCCTGGGTGGGCACGGTGGCTCACCCCT...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCCAGTCTTCTAAGGGCTaGCTGTGGCCGACGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAQSSKG*LWPTER
Trigger: CCTCTCCGTCGGCCACAGCCAGCCCTTAGAAGACTG...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp CCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGCCAGTCGAGCATCCTaGCAATGCTGTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: PVVPSAPGSRLRRILPLGASRAS*QCCVPP
Trigger: TGGTGGGACACAGCATTGCCAGGATGCTCGACTGGC...ACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCGGAAGTCACCCCCATTaGGGTAGATGTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSGSHPH*GRCQCG
Trigger: GCCACATTGACATCTACCCCAATGGGGGTGACTTCC...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTAGGAAGTCACCCCCATTaGGGTAGATGTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVGSHPH*GRCQCG
Trigger: GCCACATTGACATCTACCCCAATGGGGGTGACTTCC...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAGTTGAGTCCACAGCCTaGCTGGAAGTCACCCCCATT +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRVESTA*LEVTPI
Trigger: AATGGGGGTGACTTCCAGCCAGGCTGTGGACTCAAC...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGCTCAGAAGGCTGAGGTaGGAGGACCACCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWLRRLR*EDHLSP
Trigger: TGGGCTCAGGTGGTCCTCCCACCTCAGCCTTCTGAG...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp ATGAGTCAGCTCCTGTCGGAAGGACTTCTCACTGAGGCTCAAAGCAGGCTGAGCCCCTGCCTCTGTTCCTaGCCTCAGCCCTTTCTCATA +
Preference number: 4 (lower is better)
Translates to: MSQLLSEGLLTEAQSRLSPCLCS*PQPFLI
Trigger: TATGAGAAAGGGCTGAGGCCAGGAACAGAGGCAGGG...GCTCAGCCTGCTTTGAGCCTCAGTGAGAAGTCCTTCCGACAGGAGCTGACTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCCACTCTCTCTGGGAGTaGTCTATCCGCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAHSLWE*SIRSLG
Trigger: GCCCAGGGAGCGGATAGACCACTCCCAGAGAGAGTG...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAAGCCACACTCTCTCTaGGAGTGGTCTATCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRKPHSL*EWSIRS
Trigger: GGAGCGGATAGACCACTCCCAGAGAGAGTGTGGCTT...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCCACTGCCATCCCAAGTaGCGGAGGCGGACATTTCCC +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAHCHPK*RRRTFP
Trigger: GGGAAATGTCCGCCTCCGCCACTTGGGATGGCAGTG...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR TCA 90 bp CCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTTCTTGTGTGCAGGGCTaGCACGAGTTTGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PVVPSAPGSRLRRILPLGSCVQG*HEFVQP
Trigger: TGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGA...ACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGAGACAGATCCCCTTTTTaGAGCGATTGGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: AVWSVQPMRTPTARARARDRSPF*SDWSQC
Trigger: GCACTGACTCCAATCGCTTCAAAAAGGGGATCTGTC...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGATAATGGTAAACTCTaGAAGGCATGCCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SAPGSRLRRILPLGGSSADNGKL*KACLPG
Trigger: CCCGGGCAGGCATGCCTTTCAGAGTTTACCATTATC...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp AAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCAAGGTTGTACCAAGACTaGGAGGCCCCCTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KAEKNPSIGWVLSSNFPPRLYQD*EAPSQV
Trigger: CACCTGGGAGGGGGCCTCTCAGTCTTGGTACAACCT...TGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp CCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGAAGGACTTCTCACTaGGGCTCAAAGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PVVPSAPGSRLRRILPLGGRTSH*GSKQAE
Trigger: CTCAGCCTGCTTTGAGCCTCAGTGAGAAGTCCTTCC...ACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGTGCCTCCAGGAAATCTaGGTCCTCTCCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWCLQEI*VLSLAA
Trigger: TGCAGCCAGGGAGAGGACTCAGATTTCCTGGAGGCA...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCATCAAAACAAGCCCACTaGAGTTGCCTTGGGATAATA +
Preference number: 4 (lower is better)
Translates to: PPARSPSHHRRPVVPSAPSKQAH*SCLGII
Trigger: TATTATCCCAAGGCAACTTCAGTGGGCTTGTTTTGA...TGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCGAGCATCCTGGCAATaGTGTGTCCCACCACCCTGG +
Preference number: 4 (lower is better)
Translates to: RVKAEKNPSIGWVLSSNFRASWQ*CVPPPW
Trigger: CCAGGGTGGTGGGACACAGCATTGCCAGGATGCTCG...AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp TCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCGAGCATCCTGGCAATaGTGTGTCCCACCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SRLRRILPLGGSSAVTFLRASWQ*CVPPPW
Trigger: CCAGGGTGGTGGGACACAGCATTGCCAGGATGCTCG...GAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGACATCCACAAAATCTaGATCGTCCGGAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSDIHKI*IVRREP
Trigger: AGGCTCTCTCCGGACGATGCAGATTTTGTGGATGTC...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGTGGACGGCTCGCTCATaGTCACATTTTACCACCTCT +
Preference number: 4 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPWTARS*SHFTTS
Trigger: AGAGGTGGTAAAATGTGAGCATGAGCGAGCCGTCCA...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp TGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCATATTACAACGGTTCTTaGGGCAGCTCAGACAGATCC +
Preference number: 4 (lower is better)
Translates to: WAWIAGSLAALLARLARAYYNGS*GSSDRS
Trigger: GGATCTGTCTGAGCTGCCGCAAGAACCGTTGTAATA...TGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGTGTTGGTGGCATTCTaGTCGATCCGCTCCACTATT +
Preference number: 4 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSVLVAF*SIRSTI
Trigger: AATAGTGGAGCGGATCGAGCAGAATGCCACCAACAC...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAAGAGACACCATTTTCTaGTTTCCTCTGACATCTGAA +
Preference number: 4 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPRDTIF*FPLTSE
Trigger: TTCAGATGTCAGAGGAAAGCAGAAAATGGTGTCTCT...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTCAGATGACTGATCCATaGAAAGACGTGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVQMTDP*KDVDES
Trigger: AGATTCATCCACGTCTTTGCATGGATCAGTCATCTG...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTCAACCACAACTACATTaGCGTCTTTCTCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVQPQLH*RLSLLC
Trigger: ACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTG...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGGCCAGTCGAGCATCCTaGCAATGCTGTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGASRAS*QCCVPP
Trigger: TGGTGGGACACAGCATTGCCAGGATGCTCGACTGGC...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAGCCAGTCGAGCATCCTaGCAATGCTGTGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVASRAS*QCCVPP
Trigger: TGGTGGGACACAGCATTGCCAGGATGCTCGACTGGC...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGAATGTCAGTTTCCGCTaGGTTTCCCCAGACTTCACC +
Preference number: 4 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPNVSFR*VSPDFT
Trigger: GGTGAAGTCTGGGGAAACCCAGCGGAAACTGACATT...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp CCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGCCTGGGGATATGCTaGTGTTCTCAGGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PVVPSAPGSRLRRILPLGGLGIC*CSQGLL
Trigger: CAGAAGACCCTGAGAACACCAGCATATCCCCAGGCC...ACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGGTCTTGCTGCCTTGCTaGCAAGACTTGCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRVLLPC*QDLPGH
Trigger: GTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGAC...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTGTCTTGCTGCCTTGCTaGCAAGACTTGCCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLVLLPC*QDLPGH
Trigger: GTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGAC...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACCCATATTGGTGGGAACTaGCTGCAAAAGTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: GLDSRKSCCLAGKTCPGTHIGGN*LQKSSW
Trigger: CCATGAAGACTTTTGCAGCCAGTTCCCACCAATATG...GGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGGAATACCCCATGAATaGCACAGTGAAAAACTAAGA +
Preference number: 4 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPGIPHE*HSEKLR
Trigger: TCTTAGTTTTTCACTGTGCCATTCATGGGGTATTCC...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGAGTAATCCCGACAGTTTaGAAGGCTGAGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AVWSVQPMRTPTARARARVIPTV*KAEVGG
Trigger: TCCACCTACCTCAGCCTTCCAAACTGTCGGGATTAC...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGATTACAGCTAGTGGCTaGGCCCGGTGGCTCACACCG +
Preference number: 4 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRITASG*ARWLTP
Trigger: CGGTGTGAGCCACCGGGCCCAGCCACTAGCTGTAAT...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCTTCCTGATAAACGGATaGCAAGATCCAATTTCCCTT +
Preference number: 4 (lower is better)
Translates to: REAARAIAAQSPPARSPSFLING*QDPISL
Trigger: AAGGGAAATTGGATCTTGCCATCCGTTTATCAGGAA...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTCTGGGGAGAGGGCAGTaGGAAGAATTACAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSSMGLDSRKSCCLAGKTLGRGQ*EELQRG
Trigger: GCCCCTTTGTAATTCTTCCCACTGCCCTCTCCCCAG...AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCCGTCGAGGATCCAGCTaGAGAGACCTGTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRARRGSS*RDLCEE
Trigger: TTCCTCGCACAGGTCTCTCCAGCTGGATCCTCGACG...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGTGGAGCTTATCGCGTaGACGCCGCACGCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLVELIA*TPHARP
Trigger: GGGCCGAGCGTGCGGCGTCCACGCGATAAGCTCCAC...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
3UTR CAA 72 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATaGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGG +
Preference number: 4 (lower is better)
Translates to: SAPGSRLRRILP*GGSSAVTFLHG
Trigger: CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATCTTGTGTGCAGGGCTaGCACGAGTTTGTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVSCVQG*HEFVQP
Trigger: TGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGA...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCCAGGATCCAAACCTGTaGTTCGGCCCACCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAQDPNL*FGPPFL
Trigger: AAGGAACGGTGGGCCGAATCACAGGTTTGGATCCTG...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAATCCCAAGACATCGTTaGGTCCACAGCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVIPRHR*VHSLAG
Trigger: TCCAGCCAGGCTGTGGACTCAACGATGTCTTGGGAT...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTAAAACTCGGCTTGTCCTaGTTCACCAGAGAGTCAACA +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVKLGLS*FTREST
Trigger: TGTTGACTCTCTGGTGAATCAGGACAAGCCGAGTTT...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCCAACAGAGGAACGGCTaGCAAAAGGGTAATTGTCCA +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSQQRNG*QKGNCP
Trigger: TGGACAATTACCCTTTTGTCAGCCGTTCCTCTGTTG...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATCACTCCTTGGCGAGTaGAATCAAGCATCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVSLLGE*NQASPF
Trigger: GAAAGGAGATGCTTGATTTCACTCGCCAAGGAGTGA...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR TCA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTAGGCGGACATTTCCCTaGAACTCTGCGTCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCRRTFP*NSASAG
Trigger: CCCAGCGGACGCAGAGTTTCAGGGAAATGTCCGCCT...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR GCA 90 bp GGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACCGCTGACACGAGTTTGTaGAGCCAGTTTTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: GLDSRKSCCLAGKTCPGTADTSL*SQFSKI
Trigger: TATCTTTGAAAACTGGCTGCACAAACTCGTGTCAGC...GGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGGACGGCTCGCTCATaGTCACATTTTACCACCTCT +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLWTARS*SHFTTS
Trigger: AGAGGTGGTAAAATGTGAGCATGAGCGAGCCGTCCA...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp TGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACAGAGTCTGGGAATCTaGATTAGTGCCATAAAGGGT +
Preference number: 4 (lower is better)
Translates to: WAWIAGSLAALLARLARAQSLGI*ISAIKG
Trigger: ACCCTTTATGGCACTAATGCAGATTCCCAGACTCTG...TGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTCTTGCTGGCAAGACTTaGCCGGGCACCCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCILAGKT*PGTLRE
Trigger: TTCCCTGAGGGTGCCCGGGCAAGTCTTGCCAGCAAG...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAATTTCCCTGAAACTCTaGGTCCGCTGGGGAGGCGAT +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVISLKL*VRWGGD
Trigger: ATCGCCTCCCCAGCGGACGCAGAGTTTCAGGGAAAT...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR GCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGTCCTGGGCTAGGATGTaGCCTGCTCTGCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRSWARM*PALQHG
Trigger: ACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGA...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTCAGTCTTCTAAGGGCTaGCTGTGGCCGACGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCIQSSKG*LWPTER
Trigger: CCTCTCCGTCGGCCACAGCCAGCCCTTAGAAGACTG...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTTGGAGTCAGTGCACTaGAAGGCAAAACTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGLESVH*KAKLGL
Trigger: CAAGCCGAGTTTTGCCTTCCAGTGCACTGACTCCAA...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGATTGGAGTCAGTGCACTaGAAGGCAAAACTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRLESVH*KAKLGL
Trigger: CAAGCCGAGTTTTGCCTTCCAGTGCACTGACTCCAA...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTTGGAGTCAGTGCACTaGAAGGCAAAACTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLLESVH*KAKLGL
Trigger: CAAGCCGAGTTTTGCCTTCCAGTGCACTGACTCCAA...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp AGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGCCAGGAAGGTGTTGGTaGCATTCTGCTCGATCCGCT +
Preference number: 4 (lower is better)
Translates to: SSNFPPWAWIAGSLAALLPGRCW*HSARSA
Trigger: AGCGGATCGAGCAGAATGCCACCAACACCTTCCTGG...CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGCCTGGGGATATGCTaGTGTTCTCAGGGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSIGLGIC*CSQGLL
Trigger: CAGAAGACCCTGAGAACACCAGCATATCCCCAGGCC...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGGGGAGCAGGACGGAATaGCTAAGACGTAAGCAGTAT +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGGSRTE*LRRKQY
Trigger: ATACTGCTTACGTCTTAGCCATTCCGTCCTGCTCCC...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCCAGGATCCAAACCTGTaGTTCGGCCCACCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFQDPNL*FGPPFL
Trigger: AAGGAACGGTGGGCCGAATCACAGGTTTGGATCCTG...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGAAACTCGGCTTGTCCTaGTTCACCAGAGAGTCAACA +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGKLGLS*FTREST
Trigger: TGTTGACTCTCTGGTGAATCAGGACAAGCCGAGTTT...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTCCAGGGTCAAGGCTaGGAAGAATCCTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGLQGQG*EESFHW
Trigger: CCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAG...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGCTCCAGGGTCAAGGCTaGGAAGAATCCTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWLQGQG*EESFHW
Trigger: CCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAG...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp ACACCGGTAATCCCGACAGTTTGGAAGGCTGAGGTAGGTGGATCACTTGAGGTCTTGAGCCCAGGAGTTTaGGACCAACCTGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: TPVIPTVWKAEVGGSLEVLSPGV*DQPEQH
Trigger: ATGTTGCTCAGGTTGGTCTCAAACTCCTGGGCTCAA...GACCTCAAGTGATCCACCTACCTCAGCCTTCCAAACTGTCGGGATTACCGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCTCTCCTTCCCTTTATTaGTCCGGGTCCTGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFSPSLY*SGSCGR
Trigger: TCTGCCGCAGGACCCGGATCAATAAAGGGAAGGAGA...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR GCA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTTTTCACGAAGTTGCCTaGATACCCGGCCACGTGCGC +
Preference number: 4 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCFHEVA*IPGHVR
Trigger: GCGCACGTGGCCGGGTATGCAGGCAACTTCGTGAAA...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTGCATCTGAATACCAATaGTCAAGCCGAAGGAACGCG +
Preference number: 4 (lower is better)
Translates to: LSSMGLDSRKSCCLAGKTASEYQ*SSRRNA
Trigger: CGCGTTCCTTCGGCTTGAGCATTGGTATTCAGATGC...AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGACAGAGTCTGGGAATCTaGATTAGTGCCATAAAGGGT +
Preference number: 4 (lower is better)
Translates to: AVWSVQPMRTPTARARARQSLGI*ISAIKG
Trigger: ACCCTTTATGGCACTAATGCAGATTCCCAGACTCTG...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAGAGAGGCAGCAAGACCAGTTGTTCCCAGTaGTCCAGGGTCAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SGGVDRGLELELFKRGSKTSCSQ*SRVKAE
Trigger: CTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGT...CTTGCTGCCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCGTAGTGAGCCAAGATTaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRLRRILPLGGSSAVTFLVVSQD*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCAATCTTGGCTCACTAC...GAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGTTTGATTTGACCTACTaGCTCCATGCAAATCAAAGA +
Preference number: 4 (lower is better)
Translates to: SPLPRGVPAITGDQLFPVFDLTY*LHANQR
Trigger: TCTTTGATTTGCATGGAGGCAGTAGGTCAAATCAAA...CACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTCTCTATGGCAACCGTTaGTGCCATGGAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSILYGNR*CHGNHW
Trigger: CCAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAG...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTTCCTGGGCTAGGATGTaGCCTGCTCTGCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCSWARM*PALQHG
Trigger: ACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGA...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGGAGGCAGAGAAGGTaGAAAATGAAAACTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLWRQRR*KMKTWR
Trigger: CCGCCAAGTTTTCATTTTCCACCTTCTCTGCCTCCA...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR CCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGACAAAAACCACCTCTTaGTGTTTCCAGCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGTKTTS*CFQQSR
Trigger: CCGGGATTGCTGGAAACACCAAGAGGTGGTTTTTGT...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCACAAAAACCACCTCTTaGTGTTTCCAGCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLTKTTS*CFQQSR
Trigger: CCGGGATTGCTGGAAACACCAAGAGGTGGTTTTTGT...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR CCA 90 bp TGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCAGTTAAACCTCACAGATaGTTTGACCTCAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: WAWIAGSLAALLARLARAVKPHR*FDLSLC
Trigger: ACACAGACTGAGGTCAAACCATCTGTGAGGTTTAAC...TGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGTTGAGTCCACAGCCTaGCTGGAAGTCACCCCCATT +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRVESTA*LEVTPI
Trigger: AATGGGGGTGACTTCCAGCCAGGCTGTGGACTCAAC...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGAGTCAACAAAGAGGTaGACGGCTCGCTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWESTKR*TARSCS
Trigger: TGAGCATGAGCGAGCCGTCCACCTCTTTGTTGACTC...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCGAGTCAACAAAGAGGTaGACGGCTCGCTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAESTKR*TARSCS
Trigger: TGAGCATGAGCGAGCCGTCCACCTCTTTGTTGACTC...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGAGACCAGGAAGGTGTTaGTGGCATTCTGCTCGATCC +
Preference number: 4 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGRPGRC*WHSARS
Trigger: GGATCGAGCAGAATGCCACCAACACCTTCCTGGTCT...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTTTCCTCCATGGGCTTaGATAGCAGGAAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGFPPWA*IAGSLA
Trigger: AGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAA...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGAGAACCAGCTCTGTCTaGCAGGTGCCGGTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRRTSSV*QVPVSV
Trigger: CACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCT...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCACCAACAGATCCCTTGTaGAAGTCAGCTACACAGAAT +
Preference number: 4 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSPTDPL*KSATQN
Trigger: ATTCTGTGTAGCTGACTTCCACAAGGGATCTGTTGG...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCAGCCTATGTGTAAGGTaGCTGCCCTGCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGSLCVR*LPCSTV
Trigger: AACAGTGGAGCAGGGCAGCCACCTTACACATAGGCT...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCGGGGGAGAGCCACCTaGTCATCCCCTTTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLRGRAT*SSPLSS
Trigger: GGAGGACAAAGGGGATGACCAGGTGGCTCTCCCCCG...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAGTAGCTTTGGGTTTGTaGAGCTTATCGCGTGGACGC +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVVALGL*SLSRGR
Trigger: GCGTCCACGCGATAAGCTCCACAAACCCAAAGCTAC...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR TCA 90 bp AGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGCCACCCTGGTATTATTaGCCGCATCCGTGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: SSNFPPWAWIAGSLAALLPPWYY*PHPCKA
Trigger: AGCTTTACACGGATGCGGTCAATAATACCAGGGTGG...CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTCCACCCTGGTATTATTaGCCGCATCCGTGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSIPPWYY*PHPCKA
Trigger: AGCTTTACACGGATGCGGTCAATAATACCAGGGTGG...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCCCACCCTGGTATTATTaGCCGCATCCGTGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAPPWYY*PHPCKA
Trigger: AGCTTTACACGGATGCGGTCAATAATACCAGGGTGG...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTATCCCAAGACATCGTTaGGTCCACAGCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCIIPRHR*VHSLAG
Trigger: TCCAGCCAGGCTGTGGACTCAACGATGTCTTGGGAT...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAGACAGATCCCCTTTTTaGAGCGATTGGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVDRSPF*SDWSQC
Trigger: GCACTGACTCCAATCGCTTCAAAAAGGGGATCTGTC...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGACACAGAGGTGACACCTaGGAAATACCATATTTGATG +
Preference number: 4 (lower is better)
Translates to: AVWSVQPMRTPTARARARHRGDT*EIPYLM
Trigger: CATCAAATATGGTATTTCTCAGGTGTCACCTCTGTG...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTCTTTCTCTCTTGTGTaGAGGGCTGACACGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LSSMGLDSRKSCCLAGKTSFSLV*RADTSL
Trigger: CAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGA...AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCGAGCATCCTGGCAATaGTGTGTCCCACCACCCTGG +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLRASWQ*CVPPPW
Trigger: CCAGGGTGGTGGGACACAGCATTGCCAGGATGCTCG...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCGACATCCACAAAATCTaGATCGTCCGGAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRADIHKI*IVRREP
Trigger: AGGCTCTCTCCGGACGATGCAGATTTTGTGGATGTC...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAGCATCTGAATACCAATaGTCAAGCCGAAGGAACGCG +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVASEYQ*SSRRNA
Trigger: CGCGTTCCTTCGGCTTGAGCATTGGTATTCAGATGC...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGTGGCATTGTAGCCAATaGTATTACAACGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPWHCSQ*YYNGSC
Trigger: GCAAGAACCGTTGTAATAGCATTGGCTACAATGCCA...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCCAAATCTGGACTTGGTaGTCTGGAGGTGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGQIWTW*SGGVDR
Trigger: TCTGTCCACACCTCCAGAGCACCAAGTCCAGATTTG...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp ATGAGTCAGCTCCTGTCGGAAGGACTTCTCACTGAGGCTCAAAGCAGGCTGAGCAGGTGCCTTTCCCCATaGATATACACATACACCATC +
Preference number: 4 (lower is better)
Translates to: MSQLLSEGLLTEAQSRLSRCLSP*IYTYTI
Trigger: GATGGTGTATGTGTATATGCATGGGGAAAGGCACCT...GCTCAGCCTGCTTTGAGCCTCAGTGAGAAGTCCTTCCGACAGGAGCTGACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp CCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTTCATTCTTCCTCTCCTaGTTGGTGTCACACTTCCTC +
Preference number: 4 (lower is better)
Translates to: PVVPSAPGSRLRRILPLGSFFLS*LVSHFL
Trigger: GAGGAAGTGTGACACCAAGCAGGAGAGGAAGAATGA...ACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGAGGTTCTTTAGTGAATTaGTGTCCACTTCTGCTAACG +
Preference number: 4 (lower is better)
Translates to: AVWSVQPMRTPTARARARGSLVN*CPLLLT
Trigger: CGTTAGCAGAAGTGGACAGCAATTCACTAAAGAACC...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TCTGGACCAGGTAAAGGTCTACTAGCCATTGACAATGTGCATGACTTCAGTTCAAGTGGGCCAAGATCATaGCCCTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SGPGKGLLAIDNVHDFSSSGPRS*PCTPAW
Trigger: CCAGGCTGGAGTGCAGGGGCATGATCTTGGCCCACT...TGAACTGAAGTCATGCACATTGTCAATGGCTAGTAGACCTTTACCTGGTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCAGTAAGGTGGCTGCCCTaGTCCACTGTTTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: KAEKNPSIGWVLSSNFPPVRWLP*STVSLS
Trigger: GGATAGAGAAACAGTGGAGCAGGGCAGCCACCTTAC...TGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAGGATGTGCCCTGCTCTaGAGCATGGTATTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVGCALL*SMVLRR
Trigger: CCTTCTTAATACCATGCTGCAGAGCAGGGCACATCC...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCGATTTGATTGGATTGTaGTGGCCACTTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRADLIGL*WPLLLG
Trigger: GCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATC...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp ACACCGGTAATCCCGACAGTTTGGAAGGCTGAGGTAGGTGGATCACTTGAGGTCGTAGCTTTGGGTTTGTaGAGCTTATCTTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: TPVIPTVWKAEVGGSLEVVALGL*SLSSSR
Trigger: ACGGCTGGAAGATAAGCTCCACAAACCCAAAGCTAC...GACCTCAAGTGATCCACCTACCTCAGCCTTCCAAACTGTCGGGATTACCGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGCGGCCCCTTCAAACATaGGCCCGGCAGGATCCAAAC +
Preference number: 4 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLRPLQT*ARQDPN
Trigger: GTTTGGATCCTGCCGGGCCCATGTTTGAAGGGGCCG...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCGGCCCCTTCAAACATaGGCCCGGCAGGATCCAAAC +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLRPLQT*ARQDPN
Trigger: GTTTGGATCCTGCCGGGCCCATGTTTGAAGGGGCCG...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGGAGAGAGCCTCTTGTaGATGTCGGCCCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCGESLL*MSAPSN
Trigger: GTTTGAAGGGGCCGACATCCACAAGAGGCTCTCTCC...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGGAAGTCACCCCCATTaGGGTAGATGTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRGSHPH*GRCQCG
Trigger: GCCACATTGACATCTACCCCAATGGGGGTGACTTCC...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGTTGGAGTCAGTGCACTaGAAGGCAAAACTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWLESVH*KAKLGL
Trigger: CAAGCCGAGTTTTGCCTTCCAGTGCACTGACTCCAA...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTCTCCACTATTTCCAGTaGCAGAGTCTGGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSILHYFQ*QSLGIC
Trigger: GCAGATTCCCAGACTCTGCCACTGGAAATAGTGGAG...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGCTCCACAGTGGGACTaGTTTCGTTTTTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSIAPQWD*FRFSSS
Trigger: GGAGGATGAAAAACGAAACCAGTCCCACTGTGGAGC...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGAGTAACTTTCCTCCATaGGCTTGGATAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGSNFPP*AWIAGS
Trigger: ACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACT...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGACACAAATCTGGACTTaGTGCTCTGGAGGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWTQIWT*CSGGVD
Trigger: GTCCACACCTCCAGAGCACCAAGTCCAGATTTGTGT...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp TCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAGAGAGGCAGCAAGATCAGAGAGCTTACATaGCAGAGGGCTCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: SGGVDRGLELELFKRGSKIRELT*QRAQGS
Trigger: GCTACCCTGAGCCCTCTGCCATGTAAGCTCTCTGAT...CTTGCTGCCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTAGGGTTTCACCACATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSIRVSPH*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAATGTGGTGAAACCCT...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCTCTTCACCTCTCTATaGCAACCGTTGCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: RVKAEKNPSIGWVLSSNFLFTSL*QPLLPW
Trigger: CCATGGCAGCAACGGTTGCCATAGAGAGGTGAAGAG...AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGGTAGTCCCAGCTATTTaGGAGGCTGAAGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRVVPAI*EAEVGG
Trigger: TCCTCCCACTTCAGCCTCCCAAATAGCTGGGACTAC...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp TGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACAAGAAAACTTCTGGTaGTGGTATGTTCACAATCTC +
Preference number: 4 (lower is better)
Translates to: WAWIAGSLAALLARLARAQENFW*WYVHNL
Trigger: GAGATTGTGAACATACCACCACCAGAAGTTTTCTTG...TGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCTCTCCTACGGTGGGGTaGAGGGCTACGGGAACACCA +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLSPTVG*RATGTP
Trigger: TGGTGTTCCCGTAGCCCTCCACCCCACCGTAGGAGA...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGAAACTCTGCGTCCGCTaGGGAGGCGATCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLKLCVR*GGDPWR
Trigger: TCTCCAGGGATCGCCTCCCCAGCGGACGCAGAGTTT...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCGCTGGCCACTTCTCCTaGGCTAGGATGTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLAGHFS*ARMCPA
Trigger: AGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGC...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
3UTR CAA 72 bp ATCTGGACTTGGTGCTCTGGAGGTGTGGACAGAGGTTaGGAGTTAGAGCTATTCAAGAGAGGCAGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: IWTWCSGGVDRG*ELELFKRGSKS
Trigger: GCTCTTGCTGCCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGAGCACCAAGTCCAGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CAA 72 bp CCTGGCCTCAGCCCTTTCTCATATGGCATCTGTCCATaGCCTCTGGCCATGAGCAATTCTTGTGAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: PGLSPFSYGICP*PLAMSNSCESK
Trigger: TTTGGACTCACAAGAATTGCTCATGGCCAGAGGCAATGGACAGATGCCATATGAGAAAGGGCTGAGGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGAGAGAAGGTGGAAAATaGAAACTTGGCGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRREGGK*KLGGTE
Trigger: CTCCGTGCCGCCAAGTTTTCATTTTCCACCTTCTCT...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR TCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGACAGATCCCCTTTTTaGAGCGATTGGAGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRDRSPF*SDWSQC
Trigger: GCACTGACTCCAATCGCTTCAAAAAGGGGATCTGTC...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCTGGCCCCAGCATGAATaGTACTCTGCTTGCTATTCT +
Preference number: 4 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGWPQHE*YSACYS
Trigger: AGAATAGCAAGCAGAGTATCATTCATGCTGGGGCCA...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCCTAGAAGGAGGATATTaGATGTTCCCAACACAAAGA +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSLEGGY*MFPTQR
Trigger: TCTTTGTGTTGGGAACATTCAATATCCTCCTTCTAG...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp TCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAGAGAGGCAGCAAGCATTGCCTCTGGCCATaGGCAATTCTTGTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SGGVDRGLELELFKRGSKHCLWP*AILVSP
Trigger: TGGACTCACAAGAATTGCTCATGGCCAGAGGCAATG...CTTGCTGCCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGCATATACATTCCATATaGTCCAGCTATCCTACTCCC +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGHIHSI*SSYPTP
Trigger: GGGAGTAGGATAGCTGGATCATATGGAATGTATATG...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCGAGTGTCAACGGCTTaGCCCAGAACGAGATCTGCC +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLRVSTA*PRTRSA
Trigger: GGCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCG...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR GCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTTCTTTCTCTCTTGTGTaGAGGGCTGACACGAGTTTG +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSISFSLV*RADTSL
Trigger: CAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGA...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGTTTCACGAAGTTGCCTaGATACCCGGCCACGTGCGC +
Preference number: 4 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLFHEVA*IPGHVR
Trigger: GCGCACGTGGCCGGGTATGCAGGCAACTTCGTGAAA...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTTTCCTTTCACGAAGTTaGCTGCATACCCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCFLSRS*LHTRPR
Trigger: ACGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAA...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCATCTGAATACCAATaGTCAAGCCGAAGGAACGCG +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRASEYQ*SSRRNA
Trigger: CGCGTTCCTTCGGCTTGAGCATTGGTATTCAGATGC...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATATTACAACGGTTCTTaGGGCAGCTCAGACAGATCC +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVYYNGS*GSSDRS
Trigger: GGATCTGTCTGAGCTGCCGCAAGAACCGTTGTAATA...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTGTGTTGGTGGCATTCTaGTCGATCCGCTCCACTATT +
Preference number: 4 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLVLVAF*SIRSTI
Trigger: AATAGTGGAGCGGATCGAGCAGAATGCCACCAACAC...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp AAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCAGTTGAGACAGGTAGCTaGGAAACTCCTTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: KAEKNPSIGWVLSSNFPPVETGS*ETPSTG
Trigger: ACCTGTGGAAGGAGTTTCGCAGCTACCTGTCTCAAC...TGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTGATAGCAGGAAGTCTTaGTGCCTTGCTGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLDSRKS*CLAGKT
Trigger: AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATC...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTGTGATCTCAGCTCACTaGAAACTCCATCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLVISAH*KLHLPG
Trigger: ACCTGGGAGATGGAGTTTGCAGTGAGCTGAGATCAC...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGATGTGTCACAGGAGTTTaGTGTACAGATTATTTCGTC +
Preference number: 4 (lower is better)
Translates to: AVWSVQPMRTPTARARARCVTGV*CTDYFV
Trigger: GACGAAATAATCTGTACAGCAAACTCCTGTGACACA...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGGTCTTCTTTAAACAATaGAGACAACTCTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGVFFKQ*RQLWTR
Trigger: CCTGGTCCAGAGTTGTCTGCATTGTTTAAAGAAGAC...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTTATGGCAACCGTTGCTaGCATGGAAACCACTGGGCA +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCIYGNRC*HGNHWA
Trigger: TGCCCAGTGGTTTCCATGGCAGCAACGGTTGCCATA...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTTTAAACCACATAGCGTaGAGACTCGTCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RVKAEKNPSIGWVLSSNFLNHIA*RLVWAE
Trigger: CTCAGCCCAGACGAGTCTGCACGCTATGTGGTTTAA...AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGATTTGATTGGATTGTaGTGGCCACTTCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRDLIGL*WPLLLG
Trigger: GCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATC...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTTGGAGGCAGAGAAGGTaGAAAATGAAAACTTGGCGG +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSIWRQRR*KMKTWR
Trigger: CCGCCAAGTTTTCATTTTCCACCTTCTCTGCCTCCA...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCACAAAAACCACCTCTTaGTGTTTCCAGCAATCCCGG +
Preference number: 4 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGTKTTS*CFQQSR
Trigger: CCGGGATTGCTGGAAACACCAAGAGGTGGTTTTTGT...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGGTTAAACCTCACAGATaGTTTGACCTCAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGVKPHR*FDLSLC
Trigger: ACACAGACTGAGGTCAAACCATCTGTGAGGTTTAAC...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGCATCCTTCATGCTCTaGGTCCTTGGAGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLASFML*VLGGAE
Trigger: CTCCGCACCTCCAAGGACCCAGAGCATGAAGGATGC...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCACAACCACAACTACATTaGCGTCTTTCTCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SAPGSRLRRILPLGGSSAQPQLH*RLSLLC
Trigger: ACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTG...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTGAGTCAACAAAGAGGTaGACGGCTCGCTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCIESTKR*TARSCS
Trigger: TGAGCATGAGCGAGCCGTCCACCTCTTTGTTGACTC...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCAAATGTCAGTTTCCGCTaGGTTTCCCCAGACTTCACC +
Preference number: 4 (lower is better)
Translates to: KAEKNPSIGWVLSSNFPPNVSFR*VSPDFT
Trigger: GGTGAAGTCTGGGGAAACCCAGCGGAAACTGACATT...TGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp TCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAGAGAGGCAGCAAGGCTCCACAGTGGGACTaGTTTCGTTTTTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SGGVDRGLELELFKRGSKAPQWD*FRFSSS
Trigger: GGAGGATGAAAAACGAAACCAGTCCCACTGTGGAGC...CTTGCTGCCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTACGTCTGGGGCATATTaGTGGGAACTGGCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: RVKAEKNPSIGWVLSSNFTSGAY*WELAAK
Trigger: TTTTGCAGCCAGTTCCCACCAATATGCCCCAGACGT...AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTACAAGCTTCGCTTTaGCTAGAAAGCAATCACAGA +
Preference number: 4 (lower is better)
Translates to: SAPGSRLRRILPLGGSSAVQASL*LESNHR
Trigger: TCTGTGATTGCTTTCTAGCCAAAGCGAAGCTTGTAC...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGCTCATCGTCCATCCGTaGATGATGAAAAAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGLIVHP*MMKKVL
Trigger: TAAAACCTTTTTCATCATTCACGGATGGACGATGAG...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCATCCCAAGACATCGTTaGGTCCACAGCCTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLIPRHR*VHSLAG
Trigger: TCCAGCCAGGCTGTGGACTCAACGATGTCTTGGGAT...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGAAACTCGGCTTGTCCTaGTTCACCAGAGAGTCAACA +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRKLGLS*FTREST
Trigger: TGTTGACTCTCTGGTGAATCAGGACAAGCCGAGTTT...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp ATGAGTCAGCTCCTGTCGGAAGGACTTCTCACTGAGGCTCAAAGCAGGCTGAGCTCTTCTCGTCTTCAGTaGAATGATGTTCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: MSQLLSEGLLTEAQSRLSSSRLQ*NDVLVL
Trigger: CAGAACAAGAACATCATTTCACTGAAGACGAGAAGA...GCTCAGCCTGCTTTGAGCCTCAGTGAGAAGTCCTTCCGACAGGAGCTGACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGACACACGCACCGGTATaGTTTAAGGAAAGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWTHAPV*FKESQG
Trigger: ACCTTGACTTTCCTTAAATCATACCGGTGCGTGTGT...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGTCTTTCTCTCTTGTGTaGAGGGCTGACACGAGTTTG +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRSFSLV*RADTSL
Trigger: CAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGA...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGACATCCACAAAATCTaGATCGTCCGGAGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCDIHKI*IVRREP
Trigger: AGGCTCTCTCCGGACGATGCAGATTTTGTGGATGTC...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCTATTACAACGGTTCTTaGGGCAGCTCAGACAGATCC +
Preference number: 4 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFYYNGS*GSSDRS
Trigger: GGATCTGTCTGAGCTGCCGCAAGAACCGTTGTAATA...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTGTTGAGACAGGTAGCTaGGAAACTCCTTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCIVETGS*ETPSTG
Trigger: ACCTGTGGAAGGAGTTTCGCAGCTACCTGTCTCAAC...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCGACCTACTGCCTCCATaGAAATCAAAGATTAATTTG +
Preference number: 4 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSDLLPP*KSKINL
Trigger: CAAATTAATCTTTGATTTGCATGGAGGCAGTAGGTC...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCAGTAGCTTTGGGTTTGTaGAGCTTATCTTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: KAEKNPSIGWVLSSNFPPVALGL*SLSSSR
Trigger: ACGGCTGGAAGATAAGCTCCACAAACCCAAAGCTAC...TGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCGTAGCTTTGGGTTTGTaGAGCTTATCTTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFVALGL*SLSSSR
Trigger: ACGGCTGGAAGATAAGCTCCACAAACCCAAAGCTAC...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR CCA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCATGTTCCTCATTTTCTTaGCATTGTAGCCAATGCTAT +
Preference number: 4 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSCSSFS*HCSQCY
Trigger: ATAGCATTGGCTACAATGCCAAGAAAATGAGGAACA...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp TCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAGAGAGGCAGCAAGAGGGAAGCTCCACAGTaGGACTGGTTTCGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SGGVDRGLELELFKRGSKREAPQ*DWFRFS
Trigger: TGAAAAACGAAACCAGTCCCACTGTGGAGCTTCCCT...CTTGCTGCCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGAGTAACTTTCCTCCATaGGCTTGGATAGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSNFPPWAWIAGSLAALLSNFPP*AWIAGS
Trigger: ACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACT...CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTAATCCTTCCATTGGGTaGGTCCTCAGCAGTAACTTT +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSINPSIG*VLSSNF
Trigger: AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATT...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCAGCCTCCGGCGTAGCTaGGACTACAGGCACGTGCCA +
Preference number: 4 (lower is better)
Translates to: RCRFLCTQMCITYVITSISLRRS*DYRHVP
Trigger: TGGCACGTGCCTGTAGTCCCAGCTACGCCGGAGGCT...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp TCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAGAGAGGCAGCAAGCAGCCCTTTCTCATATaGCATCTGTCCATTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGGVDRGLELELFKRGSKQPFLI*HLSIAS
Trigger: AGAGGCAATGGACAGATGCCATATGAGAAAGGGCTG...CTTGCTGCCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp TCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCCACTGAAGTTGCCTTaGGATAATAACCAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SRLRRILPLGGSSAVTFLPLKLP*DNNQGR
Trigger: TCTGCCCTGGTTATTATCCCAAGGCAACTTCAGTGG...GAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCATTTTACCACCTCTGTaGTTGTTCCATATGCAATTG +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLILPPL*LFHMQL
Trigger: CAATTGCATATGGAACAATCACAGAGGTGGTAAAAT...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAATTTTACCACCTCTGTaGTTGTTCCATATGCAATTG +
Preference number: 4 (lower is better)
Translates to: LATSPGLGCALLCSMVLRILPPL*LFHMQL
Trigger: CAATTGCATATGGAACAATCACAGAGGTGGTAAAAT...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCCCAGGCCTGCCATCCTaGCATGAGTCAGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RCRFLCTQMCITYVITSIPGLPS*HESAPV
Trigger: GACAGGAGCTGACTCATGTCAGGATGGCAGGCCTGG...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATAGGTCAGTGCAACCCATaGGAACCCCAACAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIIGQCNP*EPQQLG
Trigger: CCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACC...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCGTGTGCTTCAGAGAGTaGGCTGGGGAGCAGGACGGA +
Preference number: 4 (lower is better)
Translates to: RCRFLCTQMCITYVITSIVCFRE*AGEQDG
Trigger: TCCGTCCTGCTCCCCAGCTCACTCTCTGAAGCACAC...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGCCTCAAAGGGACCAGTaGGCCGAGATTTGGAGTCTA +
Preference number: 4 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLPQRDQ*AEIWSL
Trigger: TAGACTCCAAATCTCGGCTCACTGGTCCCTTTGAGG...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR GCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTGGCATTGTAGCCAATaGTATTACAACGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAWHCSQ*YYNGSC
Trigger: GCAAGAACCGTTGTAATAGCATTGGCTACAATGCCA...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATGGCATTGTAGCCAATaGTATTACAACGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVWHCSQ*YYNGSC
Trigger: GCAAGAACCGTTGTAATAGCATTGGCTACAATGCCA...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTCCAGATAAAAATCTGTaGCATCAGAGAGCTTACATG +
Preference number: 4 (lower is better)
Translates to: LSSMGLDSRKSCCLAGKTPDKNL*HQRAYM
Trigger: CATGTAAGCTCTCTGATGGCACAGATTTTTATCTGG...AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTACAGTGTAATCTGATTTaGAACGATTTGATTGGATTG +
Preference number: 4 (lower is better)
Translates to: IVLATSPGLGCALLCSMVQCNLI*NDLIGL
Trigger: CAATCCAATCAAATCGTTGCAAATCAGATTACACTG...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCGTTAAACCTCACAGATaGTTTGACCTCAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRAVKPHR*FDLSLC
Trigger: ACACAGACTGAGGTCAAACCATCTGTGAGGTTTAAC...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGAGTCAACAAAGAGGTaGACGGCTCGCTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLESTKR*TARSCS
Trigger: TGAGCATGAGCGAGCCGTCCACCTCTTTGTTGACTC...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp TCTGGAGGTGTGGACAGAGGTTTGGAGTTAGAGCTATTCAAGAGAGGCAGCAAGCAAAGCAGTTATATCTaGCAACCGGCCATCATTCTG +
Preference number: 4 (lower is better)
Translates to: SGGVDRGLELELFKRGSKQSSYI*QPAIIL
Trigger: CAGAATGATGGCCGGTTGCCAGATATAACTGCTTTG...CTTGCTGCCTCTCTTGAATAGCTCTAACTCCAAACCTCTGTCCACACCTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTTGTCAGACTCTAGGTTaGGGCAGCTATATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSICQTLG*GSYILS
Trigger: TGAAAGAATATAGCTGCCCCAACCTAGAGTCTGACA...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGTTTTTAGCAGAGACGTaGTTTCACCATATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGFLAET*FHHIGQ
Trigger: CTGGCCAATATGGTGAAACCACGTCTCTGCTAAAAA...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAACTTCTGCCTTCTaGGTTCAAGTGATTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SSNFPPWAWIAGSLAALLATSAF*VQVIFL
Trigger: TAGGAAAATCACTTGAACCCAGAAGGCAGAAGTTGC...CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp ACACCGGTAATCCCGACAGTTTGGAAGGCTGAGGTAGGTGGATCACTTGAGGTCGCACAAGAAAACTTCTaGTGGTGGTATGTTCACAAT +
Preference number: 4 (lower is better)
Translates to: TPVIPTVWKAEVGGSLEVAQENF*WWYVHN
Trigger: ATTGTGAACATACCACCACCAGAAGTTTTCTTGTGC...GACCTCAAGTGATCCACCTACCTCAGCCTTCCAAACTGTCGGGATTACCGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCCACCCTGGTATTATTaGCCGCATCCGTGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLPPWYY*PHPCKA
Trigger: AGCTTTACACGGATGCGGTCAATAATACCAGGGTGG...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR TCA 90 bp ACACCGGTAATCCCGACAGTTTGGAAGGCTGAGGTAGGTGGATCACTTGAGGTCATTTTACCACCTCTGTaGTTGTTCCATATGCAATTG +
Preference number: 4 (lower is better)
Translates to: TPVIPTVWKAEVGGSLEVILPPL*LFHMQL
Trigger: CAATTGCATATGGAACAATCACAGAGGTGGTAAAAT...GACCTCAAGTGATCCACCTACCTCAGCCTTCCAAACTGTCGGGATTACCGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTCTGGTCTAAGTCACTaGTATCTAGTTCCAATTCAA +
Preference number: 4 (lower is better)
Translates to: LSSMGLDSRKSCCLAGKTSGLSH*YLVPIQ
Trigger: TTGAATTGGAACTAGATATCAGTGACTTAGACCAGA...AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTCAGTCATCCAGGCTATaGCTCTTCCTTTGGGAAATT +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCIQSSRL*LFLWEI
Trigger: AATTTCCCAAAGGAAGAGTCATAGCCTGGATGACTG...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGGCTGACACGAGTTTGTaGAGCCAGTTTTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRADTSL*SQFSKI
Trigger: TATCTTTGAAAACTGGCTGCACAAACTCGTGTCAGC...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCGCTGACACGAGTTTGTaGAGCCAGTTTTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFADTSL*SQFSKI
Trigger: TATCTTTGAAAACTGGCTGCACAAACTCGTGTCAGC...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCTGACACGAGTTTGTaGAGCCAGTTTTCAAAGATA +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRADTSL*SQFSKI
Trigger: TATCTTTGAAAACTGGCTGCACAAACTCGTGTCAGC...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCTGGACGGCTCGCTCATaGTCACATTTTACCACCTCT +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLWTARS*SHFTTS
Trigger: AGAGGTGGTAAAATGTGAGCATGAGCGAGCCGTCCA...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTTGGCATTGTAGCCAATaGTATTACAACGGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLWHCSQ*YYNGSC
Trigger: GCAAGAACCGTTGTAATAGCATTGGCTACAATGCCA...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCATTTTTAGGTACATTTTaGTGTTCCTCTTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SAPGSRLRRILPLGGSSAFLGTF*CSSCSS
Trigger: TGAGGAACAAGAGGAACAGCAAAATGTACCTAAAAA...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTTTTTAGGTACATTTTaGTGTTCCTCTTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RFDWIVLATSPGLGCALLFLGTF*CSSCSS
Trigger: TGAGGAACAAGAGGAACAGCAAAATGTACCTAAAAA...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATACCCCAGGCACCCAGCTaGTTACACACAAATCTGGAC +
Preference number: 4 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIIPQAPS*LHTNLD
Trigger: GTCCAGATTTGTGTGTAAGCAGCTGGGTGCCTGGGG...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCGGATGTGCCCTGCTCTaGAGCATGGTATTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLGCALL*SMVLRR
Trigger: CCTTCTTAATACCATGCTGCAGAGCAGGGCACATCC...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGTTAAACCTCACAGATaGTTTGACCTCAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRVKPHR*FDLSLC
Trigger: ACACAGACTGAGGTCAAACCATCTGTGAGGTTTAAC...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCGCATCCTTCATGCTCTaGGTCCTTGGAGGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: RCRFLCTQMCITYVITSIASFML*VLGGAE
Trigger: CTCCGCACCTCCAAGGACCCAGAGCATGAAGGATGC...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCCAACCACAACTACATTaGCGTCTTTCTCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFQPQLH*RLSLLC
Trigger: ACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTG...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGCAACCACAACTACATTaGCGTCTTTCTCTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: WARMCPALQHGIKKEVLRQPQLH*RLSLLC
Trigger: ACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTG...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTAAAAAGTCCAACCGTTaGCACAGATGTTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCIKKSNR*HRCSPG
Trigger: ACCAGGAGAACATCTGTGCCAACGGTTGGACTTTTT...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGAAATCAGCTTCCCTCTaGTCTAAGTCACTGATATCT +
Preference number: 4 (lower is better)
Translates to: SSNFPPWAWIAGSLAALLKSASL*SKSLIS
Trigger: AGATATCAGTGACTTAGACCAGAGGGAAGCTGATTT...CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCCAGGATCCAAACCTGTaGTTCGGCCCACCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RCRFLCTQMCITYVITSIQDPNL*FGPPFL
Trigger: AAGGAACGGTGGGCCGAATCACAGGTTTGGATCCTG...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGCCATGTTCTTGTAACTaGAGACATGGATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWPCSCN*RHGFSS
Trigger: AGATGAAAATCCATGTCTTCAGTTACAAGAACATGG...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR TCA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTATAAAATGGAACAGATaGCTGATCCATGCAAAGACG +
Preference number: 4 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLIKWNR*LIHAKT
Trigger: CGTCTTTGCATGGATCAGTCATCTGTTCCATTTTAT...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGTCTTTCTCTCTTGTGTaGAGGGCTGACACGAGTTTG +
Preference number: 4 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLSFSLV*RADTSL
Trigger: CAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGA...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATAAGCAGGAAGTCTTGCTaGCTTGCTGGCAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIISRKSC*LAGKTC
Trigger: GCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCT...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AGGCAATGCATACACAAATCTTTTGAAAAGTGTAAGTGTCTCAGATATTGTGTGCCAGGAGGCGGAGGTTaGAGTGGGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: RQCIHKSFEKCKCLRYCVPGGGG*SGPRSC
Trigger: GCATGATCTTGGCCCACTGCAACCTCCGCCTCCTGG...CACACAATATCTGAGACACTTACACTTTTCAAAAGATTTGTGTATGCATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGGCAATGCATACACAAATCTTTTGAAAAGTGTAAGTGTCTCAGATATTGTGTGCGGCCCCTTCAAACATaGGCCCGGCAGGATCCAAAC +
Preference number: 4 (lower is better)
Translates to: RQCIHKSFEKCKCLRYCVRPLQT*ARQDPN
Trigger: GTTTGGATCCTGCCGGGCCCATGTTTGAAGGGGCCG...CACACAATATCTGAGACACTTACACTTTTCAAAAGATTTGTGTATGCATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTGTTCCTCATTTTCTTaGCATTGTAGCCAATGCTAT +
Preference number: 4 (lower is better)
Translates to: ARMCPALQHGIKKEVLRACSSFS*HCSQCY
Trigger: ATAGCATTGGCTACAATGCCAAGAAAATGAGGAACA...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
3UTR CAA 72 bp CCATATTTGATGACAAAGACTGTTCTAGTACCTACTTaGTATCCATCCTTCCAAGGGGTCTGGGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PYLMTKTVLVPT*YPSFQGVWGFS
Trigger: GCTGAAGCCCCAGACCCCTTGGAAGGATGGATACAAAGTAGGTACTAGAACAGTCTTTGTCATCAAATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATAAGAGAAGGTGGAAAATaGAAACTTGGCGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIIREGGK*KLGGTE
Trigger: CTCCGTGCCGCCAAGTTTTCATTTTCCACCTTCTCT...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATCTCTGTTTCTTAAATaGGCAGATAGAGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: KAEKNPSIGWVLSSNFPPSLFLK*ADRDSE
Trigger: TTCTGAGTCTCTATCTGCTCATTTAAGAAACAGAGA...TGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTAATTTCCTTTTGATTTaGCCTACTGCCTCCATGCAA +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCINFLLI*PTASMQ
Trigger: TTGCATGGAGGCAGTAGGTCAAATCAAAAGGAAATT...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTATAGAGGATACAGGATaGATAGTAAGACTGACATCT +
Preference number: 4 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLIEDTG*IVRLTS
Trigger: AGATGTCAGTCTTACTATTCATCCTGTATCCTCTAT...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGTTTTTAGGTACATTTTaGTGTTCCTCTTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSNFPPWAWIAGSLAALLFLGTF*CSSCSS
Trigger: TGAGGAACAAGAGGAACAGCAAAATGTACCTAAAAA...CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR GCA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTACAGTGTAATCTGATTTaGAACGATTTGATTGGATTG +
Preference number: 4 (lower is better)
Translates to: FSWARMCPALQHGIKKEVQCNLI*NDLIGL
Trigger: CAATCCAATCAAATCGTTGCAAATCAGATTACACTG...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTTGTTCCTCATTTTCTTaGCATTGTAGCCAATGCTAT +
Preference number: 4 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLCSSFS*HCSQCY
Trigger: ATAGCATTGGCTACAATGCCAAGAAAATGAGGAACA...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CCA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATACTCCACTATTTCCAGTaGCAGAGTCTGGGAATCTGC +
Preference number: 4 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIILHYFQ*QSLGIC
Trigger: GCAGATTCCCAGACTCTGCCACTGGAAATAGTGGAG...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATAATTCTGGCCCCAGCATaGATGATACTCTGCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIIILAPA*MILCLL
Trigger: TAGCAAGCAGAGTATCATTCATGCTGGGGCCAGAAT...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCTTTTTAGGTACATTTTaGTGTTCCTCTTGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFFLGTF*CSSCSS
Trigger: TGAGGAACAAGAGGAACAGCAAAATGTACCTAAAAA...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR GCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCGCCAAAGAAGGCACTTaGAGTCATCCAGGCTATGAC +
Preference number: 4 (lower is better)
Translates to: RCRFLCTQMCITYVITSIAKEGT*SHPGYD
Trigger: GTCATAGCCTGGATGACTGCAAGTGCCTTCTTTGGC...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTTGTTATGTAGTTAAATaGTGTGTCACAGGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: LEPALSGRCRFLCTQMCICYVVK*CVTGVC
Trigger: GCAAACTCCTGTGACACACCATTTAACTACATAACA...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GTGGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCATGATGATTTCCCAGCCTGTCATGTaGCCATGGATTTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: VVVCSQSRCGNAFSFMMISQPVM*PWIYFW
Trigger: CCAGAAATAAATCCATGGTCACATGACAGGCTGGGA...AATCATCATGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp GTGGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCATGATGATTATACTTGGAGCTACATaGCAATATGTCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VVVCSQSRCGNAFSFMMIILGAT*QYVTGA
Trigger: GGCCCCTGTGACATATTGTCATGTAGCTCCAAGTAT...AATCATCATGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GTGGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCATGATGATTTATTACAACGGTTCTTaGGGCAGCTCAGACAGATCC +
Preference number: 4 (lower is better)
Translates to: VVVCSQSRCGNAFSFMMIYYNGS*GSSDRS
Trigger: GGATCTGTCTGAGCTGCCGCAAGAACCGTTGTAATA...AATCATCATGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR GCA 90 bp GTGGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCATGATGATTGCTCACTGCAACTTCTaGCTTCTGGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VVVCSQSRCGNAFSFMMIAHCNF*LLGSSD
Trigger: ATCACTTGAACCCAGAAGGCAGAAGTTGCAGTGAGC...AATCATCATGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCAAATCCCAACTCCACTaGGTTCCAAATGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RCRFLCTQMCITYVITSIKSQLH*VPNGEA
Trigger: AGCCTCTCCATTTGGAACCCAGTGGAGTTGGGATTT...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGGCAATGCATACACAAATCTTTTGAAAAGTGTAAGTGTCTCAGATATTGTGTGCCTTCTGGGTTCAAGTaGTTTTCCTACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RQCIHKSFEKCKCLRYCVPSGFK*FSYLSL
Trigger: GAGGCTGAGGTAGGAAAATCACTTGAACCCAGAAGG...CACACAATATCTGAGACACTTACACTTTTCAAAAGATTTGTGTATGCATTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCTGTTCCTCATTTTCTTaGCATTGTAGCCAATGCTAT +
Preference number: 4 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLCSSFS*HCSQCY
Trigger: ATAGCATTGGCTACAATGCCAAGAAAATGAGGAACA...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCAATCCTTCCATTGGGTaGGTCCTCAGCAGTAACTTT +
Preference number: 4 (lower is better)
Translates to: RCRFLCTQMCITYVITSINPSIG*VLSSNF
Trigger: AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATT...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp AGGCAATGCATACACAAATCTTTTGAAAAGTGTAAGTGTCTCAGATATTGTGTGTGTTTGTCTCACGTCTaGGGCATATTGGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: RQCIHKSFEKCKCLRYCVCLSHV*GILVGT
Trigger: AGTTCCCACCAATATGCCCCAGACGTGAGACAAACA...CACACAATATCTGAGACACTTACACTTTTCAAAAGATTTGTGTATGCATTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CAA 72 bp TATGTCATAACTTCTATCTCTCTAAACAGAAGAGATTaGCTCCAAAGCAGTTATATCTGGCAACCGGCCATC +
Preference number: 4 (lower is better)
Translates to: YVITSISLNRRD*LQSSYIWQPAI
Trigger: GATGGCCGGTTGCCAGATATAACTGCTTTGGAGCAAATCTCTTCTGTTTAGAGAGATAGAAGTTATGACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCAGTGTCCTATACCACTaGAGGGTAAAACTAGAGTTA +
Preference number: 4 (lower is better)
Translates to: RCRFLCTQMCITYVITSISVLYH*RVKLEL
Trigger: TAACTCTAGTTTTACCCTTCAGTGGTATAGGACACT...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CAA 72 bp AGTGAAATGATGTTCTTGTTCTGGTTCTTTAGTGAATaGCTGTCCACTTCTGCTAACGATGAGTGTCAAATA +
Preference number: 4 (lower is better)
Translates to: SEMMFLFWFFSE*LSTSANDECQI
Trigger: TATTTGACACTCATCGTTAGCAGAAGTGGACAGCAATTCACTAAAGAACCAGAACAAGAACATCATTTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR TCA 90 bp AGGCAATGCATACACAAATCTTTTGAAAAGTGTAAGTGTCTCAGATATTGTGTGGTCAATAAAAAGCTGTaGGAAGAAGAAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RQCIHKSFEKCKCLRYCVVNKKL*EEEGEE
Trigger: CTCTTCTCCTTCTTCTTCTCACAGCTTTTTATTGAC...CACACAATATCTGAGACACTTACACTTTTCAAAAGATTTGTGTATGCATTGCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CCA 90 bp GTGGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCATGATGATTCCATGGATTTATTTCTaGCCAATAGAATGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: VVVCSQSRCGNAFSFMMIPWIYF*PIECKQ
Trigger: TTGCTTACATTCTATTGGCCAGAAATAAATCCATGG...AATCATCATGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
3UTR CAA 72 bp TTTCTCTATCCCAACAGGAACCTTTCCTTTTGTTTCTaGGTTTTCGTTTGTTTGTTTGTTTCTGAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: FLYPNRNLSFCF*VFVCLFVSEFA
Trigger: AGCAAACTCAGAAACAAACAAACAAACGAAAACCAAGAAACAAAAGGAAAGGTTCCTGTTGGGATAGAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS CCA 90 bp GCAGCGAGCGGAGGGAGAACTTGGCCCGGAGTCTGCGTCTGGCGCTaGGGAGCGGGGACTGAGCCCGGAACACCGACGGGGCGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: AASGGRTWPGVCVWR*GAGTEPGTPTGRLR
Trigger: GCGCAGCCGCCCCGTCGGTGTTCCGGGCTCAGTCCCCGCTCCCCAGCGCCAGACGCAGACTCCGGGCCAAGTTCTCCCTCCGCTCGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS GCA 90 bp GCGGCACGGAGCCCGGGCGGTGGCAGGGAGCGAGTGTCAACGGCTTaGCCCAGAACGAGATCTGCCCTCGTCCTGAGCCGCCGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: AARSPGGGRERVSTA*PRTRSALVLSRREA
Trigger: TGCCTCCCGGCGGCTCAGGACGAGGGCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCGCTCCCTGCCACCGCCCGGGCTCCGTGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS GCA 90 bp CAACAACCACTGCGGACGCAGGGCGGGTACGAGAGGCTGAGAGGCTaGGTCCCGCCATCCAGCCTCGCTCCAGCCGGGAGGATCCGGCTC +
Preference number: 5 (lower is better)
Translates to: QQPLRTQGGYERLRG*VPPSSLAPAGRIRL
Trigger: GAGCCGGATCCTCCCGGCTGGAGCGAGGCTGGATGGCGGGACGCAGCCTCTCAGCCTCTCGTACCCGCCCTGCGTCCGCAGTGGTTGTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 90 bp TTGATCCGGGTCCTGCGGCAGAAAGCAGCGAGCGGAGGGAGAACTTaGCCCGGAGTCTGCGTCTGGCGCTGGGGAGCGGGGACTGAGCCC +
Preference number: 5 (lower is better)
Translates to: LIRVLRQKAASGGRT*PGVCVWRWGAGTEP
Trigger: GGGCTCAGTCCCCGCTCCCCAGCGCCAGACGCAGACTCCGGGCCAAGTTCTCCCTCCGCTCGCTGCTTTCTGCCGCAGGACCCGGATCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 90 bp TTAGCGAGGCGCGGAGCTCGTGGCAGGCGCTCTCCTACGGTGGGGTaGAGGGCTACGGGAACACCAGGCGACCTCCTCAAAGGGACCAGT +
Preference number: 5 (lower is better)
Translates to: LARRGARGRRSPTVG*RATGTPGDLLKGTS
Trigger: ACTGGTCCCTTTGAGGAGGTCGCCTGGTGTTCCCGTAGCCCTCCACCCCACCGTAGGAGAGCGCCTGCCACGAGCTCCGCGCCTCGCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000583083.1
CDS CCA 90 bp GGAGAGCATCCTCTCCAAGGCTCAAAGCCACACTCTCTCTGGGAGTaGTCTATCCGCTCCCTGGGCCGGGAGTCCGTCGGGGGAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GEHPLQGSKPHSLWE*SIRSLGRESVGGEP
Trigger: TGGCTCTCCCCCGACGGACTCCCGGCCCAGGGAGCGGATAGACCACTCCCAGAGAGAGTGTGGCTTTGAGCCTTGGAGAGGATGCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CAA 90 bp AGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCCTTGCTGGCAAGACTaGCCCGGGCACCCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SPLPRGVPAITGDQLFPVPCWQD*PGHPQG
Trigger: TCCCTGAGGGTGCCCGGGCAAGTCTTGCCAGCAAGG...CACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCAAGTGGGAGGACTGCTaGAGCCCAGGAGGTCGAGGC +
Preference number: 5 (lower is better)
Translates to: REAARAIAAQSPPARSPSKWEDC*SPGGRG
Trigger: GCCTCGACCTCCTGGGCTCAAGCAGTCCTCCCACTT...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS TCA 90 bp TCCTCTCCCCACTGCCATCCCAAGTGGCGGAGGCGGACATTTCCCTaGAACTCTGCGTCCGCTGGGGAGGCGATCCCTGGAGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SSPHCHPKWRRRTFP*NSASAGEAIPGEGE
Trigger: CTCTCCTTCTCCAGGGATCGCCTCCCCAGCGGACGCAGAGTTTCAGGGAAATGTCCGCCTCCGCCACTTGGGATGGCAGTGGGGAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 90 bp AAGGCTCAAAGCCACACTCTCTCTGGGAGTGGTCTATCCGCTCCCTaGGCCGGGAGTCCGTCGGGGGAGAGCCACCTGGTCATCCCCTTT +
Preference number: 5 (lower is better)
Translates to: KAQSHTLSGSGLSAP*AGSPSGESHLVIPF
Trigger: AAAGGGGATGACCAGGTGGCTCTCCCCCGACGGACTCCCGGCCCAGGGAGCGGATAGACCACTCCCAGAGAGAGTGTGGCTTTGAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 90 bp GGAGAAGGAGAGCATCCTCTCCAAGGCTCAAAGCCACACTCTCTCTaGGAGTGGTCTATCCGCTCCCTGGGCCGGGAGTCCGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: GEGEHPLQGSKPHSL*EWSIRSLGRESVGG
Trigger: TCCCCCGACGGACTCCCGGCCCAGGGAGCGGATAGACCACTCCCAGAGAGAGTGTGGCTTTGAGCCTTGGAGAGGATGCTCTCCTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CAA 90 bp AGAGAGGCAGCAAGAGCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCGTGGAAAATGAAAACTaGGCGGCACGGAGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: REAARAIAAQSPPARSPSVENEN*AARSPG
Trigger: GCCCGGGCTCCGTGCCGCCAAGTTTTCATTTTCCAC...GCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGCTCTTGCTGCCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCATCCGGGGTTGCGGGGTaGAGACAGGTAGCTGCGAAA +
Preference number: 5 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPSGVAG*RQVAAK
Trigger: TTTCGCAGCTACCTGTCTCAACCCCGCAACCCCGGA...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS GCA 90 bp CCACTGCCATCCCAAGTGGCGGAGGCGGACATTTCCCTGAAACTCTaGGTCCGCTGGGGAGGCGATCCCTGGAGAAGGAGAGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: PLPSQVAEADISLKL*VRWGGDPWRRRASS
Trigger: AGAGGATGCTCTCCTTCTCCAGGGATCGCCTCCCCAGCGGACGCAGAGTTTCAGGGAAATGTCCGCCTCCGCCACTTGGGATGGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 90 bp ACTAAGAGTTCACGTAGCAAAGCACTTAGCGAGGCGCGGAGCTCGTaGCAGGCGCTCTCCTACGGTGGGGTGGAGGGCTACGGGAACACC +
Preference number: 5 (lower is better)
Translates to: TKSSRSKALSEARSS*QALSYGGVEGYGNT
Trigger: GGTGTTCCCGTAGCCCTCCACCCCACCGTAGGAGAGCGCCTGCCACGAGCTCCGCGCCTCGCTAAGTGCTTTGCTACGTGAACTCTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000583083.1
CDS CCA 90 bp TCCCAAGTGGCGGAGGCGGACATTTCCCTGAAACTCTGCGTCCGCTaGGGAGGCGATCCCTGGAGAAGGAGAGCATCCTCTCCAAGGCTC +
Preference number: 5 (lower is better)
Translates to: SQVAEADISLKLCVR*GGDPWRRRASSPRL
Trigger: GAGCCTTGGAGAGGATGCTCTCCTTCTCCAGGGATCGCCTCCCCAGCGGACGCAGAGTTTCAGGGAAATGTCCGCCTCCGCCACTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS TCA 90 bp GTGGAGGGCTACGGGAACACCAGGCGACCTCCTCAAAGGGACCAGTaGGCCGAGATTTGGAGTCTAAGACGCGTGGCCAGAGCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: VEGYGNTRRPPQRDQ*AEIWSLRRVARAQC
Trigger: ACACTGGGCTCTGGCCACGCGTCTTAGACTCCAAATCTCGGCTCACTGGTCCCTTTGAGGAGGTCGCCTGGTGTTCCCGTAGCCCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000583083.1
CDS GCA 90 bp GAGATCCTGCTGGTGACAGGAGACTCCCTCTCATCCCCCAGTACCTaGAGCCAGTCGAGCATCCTGGCAATGCTGTGTCCCACCACCCTG +
Preference number: 5 (lower is better)
Translates to: EILLVTGDSLSSPST*SQSSILAMLCPTTL
Trigger: CAGGGTGGTGGGACACAGCATTGCCAGGATGCTCGACTGGCTGCAGGTACTGGGGGATGAGAGGGAGTCTCCTGTCACCAGCAGGATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579750.1
CDS-3UTR CAA 90 bp GGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACCGTGGAAAATGAAAACTaGGCGGCACGGAGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: GLDSRKSCCLAGKTCPGTVENEN*AARSPG
Trigger: GCCCGGGCTCCGTGCCGCCAAGTTTTCATTTTCCAC...GGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp AGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTGGCGTCTTTCTCTCTaGTGTGCAGGGCTGACACGA +
Preference number: 5 (lower is better)
Translates to: SSAVPSREESQPSQETSCWRLSL*CAGLTR
Trigger: TCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCA...ACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGACCTTGCTGGCAAGACTaGCCCGGGCACCCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: AVWSVQPMRTPTARARARPCWQD*PGHPQG
Trigger: TCCCTGAGGGTGCCCGGGCAAGTCTTGCCAGCAAGG...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp GGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACCGTTCCTTTCACGAAGTaGCCTGCATACCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: GLDSRKSCCLAGKTCPGTVPFTK*PAYPAT
Trigger: CGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAAC...GGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp ATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGCCAAGTTGGGTGGATaGCTTGAGCCCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: IAAQSPPARSPSHHRRPVAKLGG*LEPRSL
Trigger: CAAACTCCTGGGCTCAAGCAATCCACCCAACTTGGC...AACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCGAGCGGAGGGAGAACTaGGCCCGGAGTCTGCGTCTG +
Preference number: 5 (lower is better)
Translates to: RFDWIVLATSPGLGCALLERREN*ARSLRL
Trigger: CAGACGCAGACTCCGGGCCAAGTTCTCCCTCCGCTC...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS GCA 90 bp ATCCAAACCTGTGATTCGGCCCACCGTTCCTTTCACGAAGTTGCCTaGATACCCGGCCACGTGCGCTCCGAGGCTGTAGCCGATCAAGTG +
Preference number: 5 (lower is better)
Translates to: IQTCDSAHRSFHEVA*IPGHVRSEAVADQV
Trigger: CACTTGATCGGCTACAGCCTCGGAGCGCACGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAACGGTGGGCCGAATCACAGGTTTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS GCA 90 bp TGTGATTGCTGTGATTCGGCCCACCGTTCCTTTCACGAAGTTGCCTaGATACCCGGCCACGTGCGCTCCGAGGCTGTAGCCGATCAAGTG +
Preference number: 5 (lower is better)
Translates to: CDCCDSAHRSFHEVA*IPGHVRSEAVADQV
Trigger: CACTTGATCGGCTACAGCCTCGGAGCGCACGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAACGGTGGGCCGAATCACAGCAATCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427224.6
CDS CCA 90 bp GCGGACATTTCCCTGAAACTCTGCGTCCGCTGGGGAGGCGATCCCTaGAGAAGGAGAGCATCCTCTCCAAGGCTCAAAGCCACACTCTCT +
Preference number: 5 (lower is better)
Translates to: ADISLKLCVRWGGDP*RRRASSPRLKATLS
Trigger: AGAGAGTGTGGCTTTGAGCCTTGGAGAGGATGCTCTCCTTCTCCAGGGATCGCCTCCCCAGCGGACGCAGAGTTTCAGGGAAATGTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CAA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATCCGGAGAGAGCCTCTaGTGGATGTCGGCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: IVLATSPGLGCALLCSMVSGESL*WMSAPS
Trigger: TGAAGGGGCCGACATCCACAAGAGGCTCTCTCCGGA...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS TCA 90 bp AGTCGAGCATCCTGGCAATGCTGTGTCCCACCACCCTGGTATTATTaGCCGCATCCGTGTAAAGCTGGTGGGCCAGGGGGAGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: SRASWQCCVPPPWYY*PHPCKAGGPGGASQ
Trigger: TTGACTGGCTCCCCCTGGCCCACCAGCTTTACACGGATGCGGTCAATAATACCAGGGTGGTGGGACACAGCATTGCCAGGATGCTCGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS-3UTR CAA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAAACCTCACAGATGGTTaGACCTCAGTCTGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPNLTDG*TSVCVA
Trigger: AGCTACACAGACTGAGGTCAAACCATCTGTGAGGTT...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp TGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCATGGCGTCTTTCTCTCTaGTGTGCAGGGCTGACACGA +
Preference number: 5 (lower is better)
Translates to: WAWIAGSLAALLARLARAWRLSL*CAGLTR
Trigger: TCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCA...TGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGTTCCTTTCACGAAGTaGCCTGCATACCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSVPFTK*PAYPAT
Trigger: CGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAAC...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCGGAGAGAGCCTCTaGTGGATGTCGGCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: VVPSAPGSRLRRILPLGGSGESL*WMSAPS
Trigger: TGAAGGGGCCGACATCCACAAGAGGCTCTCTCCGGA...CCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTCCGGAGAGAGCCTCTaGTGGATGTCGGCCCCTTCA +
Preference number: 5 (lower is better)
Translates to: RFDWIVLATSPGLGCALLSGESL*WMSAPS
Trigger: TGAAGGGGCCGACATCCACAAGAGGCTCTCTCCGGA...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp AGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTAGACAGATCCCCTTTTaGAAGCGATTGGAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SSAVPSREESQPSQETSCRQIPF*KRLESV
Trigger: CACTGACTCCAATCGCTTCAAAAAGGGGATCTGTCT...ACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp CCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCACTATTACAACGGTTCTaGCGGCAGCTCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: PPARSPSHHRRPVVPSAPLLQRF*RQLRQI
Trigger: GATCTGTCTGAGCTGCCGCAAGAACCGTTGTAATAG...TGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp ACACCGGTAATCCCGACAGTTTGGAAGGCTGAGGTAGGTGGATCACTTGAGGTCCCCAGGAGGCGGAGGTaGCAGTGGGCCAAGATCATG +
Preference number: 5 (lower is better)
Translates to: TPVIPTVWKAEVGGSLEVPRRRR*QWAKIM
Trigger: CATGATCTTGGCCCACTGCAACCTCCGCCTCCTGGG...GACCTCAAGTGATCCACCTACCTCAGCCTTCCAAACTGTCGGGATTACCGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTACCAGTGAGCCGAGATTaGGAGTCTAAGACGCGTGGC +
Preference number: 5 (lower is better)
Translates to: IVLATSPGLGCALLCSMVPVSRD*ESKTRG
Trigger: GCCACGCGTCTTAGACTCCAAATCTCGGCTCACTGG...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS GCA 90 bp CAGTGGGACTGGTTTCGTTTTTCATCCTCCAGCCATCCCGACACTTaGGAAACCAGAGCTCCCGGCCTGGGGATATGCTGGTGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: QWDWFRFSSSSHPDT*ETRAPGLGICWCSQ
Trigger: CTGAGAACACCAGCATATCCCCAGGCCGGGAGCTCTGGTTTCGCAAGTGTCGGGATGGCTGGAGGATGAAAAACGAAACCAGTCCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CCA 90 bp TGGAGGACATCCACAAAATCTGCATCGTCCGGAGAGAGCCTCTTGTaGATGTCGGCCCCTTCAAACATGGGCCCGGCAGGATCCAAACCT +
Preference number: 5 (lower is better)
Translates to: WRTSTKSASSGESLL*MSAPSNMGPAGSKP
Trigger: AGGTTTGGATCCTGCCGGGCCCATGTTTGAAGGGGCCGACATCCACAAGAGGCTCTCTCCGGACGATGCAGATTTTGTGGATGTCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp CCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCAAACAAAAACCACCTCTaGGTGTTTCCAGCAATCCCG +
Preference number: 5 (lower is better)
Translates to: PPARSPSHHRRPVVPSAPNKNHL*VFPAIP
Trigger: CGGGATTGCTGGAAACACCAAGAGGTGGTTTTTGTT...TGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp CAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCTCATGCTCTGGGTCCTaGGAGGTGCGGAGGTTAAAC +
Preference number: 5 (lower is better)
Translates to: QCSRVKAEKNPSIGWVLSSCSGS*EVRRLN
Trigger: GTTTAACCTCCGCACCTCCAAGGACCCAGAGCATGA...GCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGGCTGACACGAGTTaGTGCAGCCAGTTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: ARSPSHHRRPVVPSAPGSRADTS*CSQFSK
Trigger: CTTTGAAAACTGGCTGCACAAACTCGTGTCAGCCCT...TGACCCTGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GCTATAGCAGCGCAGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCATCAACCACAACTACATaGGCGTCTTTCTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: AIAAQSPPARSPSHHRRPSTTTT*ASFSLV
Trigger: CACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGA...TGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACTGCGCTGCTATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACCCCCTTTTTGAAGCGATaGGAGTCAGTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: GLDSRKSCCLAGKTCPGTPFLKR*ESVHWK
Trigger: CTTCCAGTGCACTGACTCCAATCGCTTCAAAAAGGG...GGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTGGAAGTCTTGCTGCCTaGCTGGCAAGACTTGCCCGG +
Preference number: 5 (lower is better)
Translates to: LSSMGLDSRKSCCLAGKTGSLAA*LARLAR
Trigger: CCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCC...AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGATCACAGGAGACCAGTaGTTCCCAGTGCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPITGDQ*FPVLQG
Trigger: ACCCTGGAGCACTGGGAACAACTGGTCTCCTGTGAT...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGACACGTCTGGGGCATATaGGTGGGAACTGGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: AVWSVQPMRTPTARARARHVWGI*VGTGCK
Trigger: TTTGCAGCCAGTTCCCACCAATATGCCCCAGACGTG...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS GCA 90 bp CAAGCCGAAGGAACGCGTGTAGGTGTGGAGGACATCCACAAAATCTaGATCGTCCGGAGAGAGCCTCTTGTGGATGTCGGCCCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: QAEGTRVGVEDIHKI*IVRREPLVDVGPFK
Trigger: TTTGAAGGGGCCGACATCCACAAGAGGCTCTCTCCGGACGATGCAGATTTTGTGGATGTCCTCCACACCTACACGCGTTCCTTCGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS GCA 90 bp AGGTCCCGAGTGCTGCCTTCTCTCCCTAACCTGACAAGCCATAGATaGACTTTGAGAAACACCACACTGCAGCACCCTCTGGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: RSRVLPSLPNLTSHR*TLRNTTLQHPLDPE
Trigger: CTCAGGGTCCAGAGGGTGCTGCAGTGTGGTGTTTCTCAAAGTGCATCTATGGCTTGTCAGGTTAGGGAGAGAAGGCAGCACTCGGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS CCA 90 bp AGAGGTCTCCCAAGTCCTCCTCGGTGTAGACCAGGAAGGTGTTGGTaGCATTCTGCTCGATCCGCTCCACTATTTCCAGTGGCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: RGLPSPPRCRPGRCW*HSARSAPLFPVAES
Trigger: AGACTCTGCCACTGGAAATAGTGGAGCGGATCGAGCAGAATGCCACCAACACCTTCCTGGTCTACACCGAGGAGGACTTGGGAGACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CCA 90 bp TCAAGAGGTCTCCCAAGTCCTCCTCGGTGTAGACCAGGAAGGTGTTaGTGGCATTCTGCTCGATCCGCTCCACTATTTCCAGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SRGLPSPPRCRPGRC*WHSARSAPLFPVAE
Trigger: CTCTGCCACTGGAAATAGTGGAGCGGATCGAGCAGAATGCCACCAACACCTTCCTGGTCTACACCGAGGAGGACTTGGGAGACCTCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CCA 90 bp CATCCCGACACTTGCGAAACCAGAGCTCCCGGCCTGGGGATATGCTaGTGTTCTCAGGGTCTTCTGTACAAAATGTCAGTTTCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: HPDTCETRAPGLGIC*CSQGLLYKMSVSAG
Trigger: CCCAGCGGAAACTGACATTTTGTACAGAAGACCCTGAGAACACCAGCATATCCCCAGGCCGGGAGCTCTGGTTTCGCAAGTGTCGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CCA 90 bp CATCCTCCAGCCATCCCGACACTTGCGAAACCAGAGCTCCCGGCCTaGGGATATGCTGGTGTTCTCAGGGTCTTCTGTACAAAATGTCAG +
Preference number: 5 (lower is better)
Translates to: HPPAIPTLAKPELPA*GYAGVLRVFCTKCQ
Trigger: CTGACATTTTGTACAGAAGACCCTGAGAACACCAGCATATCCCCAGGCCGGGAGCTCTGGTTTCGCAAGTGTCGGGATGGCTGGAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGGCGAGTGTCAACGGCTaGCCCCAGAACGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGASVNG*PQNEIC
Trigger: GCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCGC...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp AGTCCCCTCCCGCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGTCAGTCTGTGTAGCTTaGGGTTTGTGGAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: SPLPRGVPAITGDQLFPVSVCVA*GLWSLS
Trigger: AGATAAGCTCCACAAACCCAAAGCTACACAGACTGA...CACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGCGGGAGGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGGCGTCTTTCTCTCTaGTGTGCAGGGCTGACACGA +
Preference number: 5 (lower is better)
Translates to: RFDWIVLATSPGLGCALLWRLSL*CAGLTR
Trigger: TCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCA...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTTCCGGGGTTGCGGGGTaGAGACAGGTAGCTGCGAAA +
Preference number: 5 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSISGVAG*RQVAAK
Trigger: TTTCGCAGCTACCTGTCTCAACCCCGCAACCCCGGA...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGGGAAGTCTTGCTGCCTaGCTGGCAAGACTTGCCCGG +
Preference number: 5 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGGSLAA*LARLAR
Trigger: CCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCC...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp TCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGCTTTCCTCCATGGGCTaGGATAGCAGGAAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: SMGLDSRKSCCLAGKTCPLSSMG*DSRKSC
Trigger: GCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG...CGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCACACACAAATCTGGACTaGGTGCTCTGGAGGTGTGGA +
Preference number: 5 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSHTNLD*VLWRCG
Trigger: TCCACACCTCCAGAGCACCAAGTCCAGATTTGTGTG...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS GCA 90 bp AGCCATCCCGACACTTGCGAAACCAGAGCTCCCGGCCTGGGGATATaGTGGTGTTCTCAGGGTCTTCTGTACAAAATGTCAGTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: SHPDTCETRAPGLGI*WCSQGLLYKMSVSA
Trigger: AGCGGAAACTGACATTTTGTACAGAAGACCCTGAGAACACCAGCATATCCCCAGGCCGGGAGCTCTGGTTTCGCAAGTGTCGGGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CCA 90 bp TGTAAAGCTGGTGGGCCAGGGGGAGCCAGTCAACCACAACTACATTaGCGTCTTTCTCTCTTGTGTGCAGGGCTGACACGAGTTTGTGCA +
Preference number: 5 (lower is better)
Translates to: CKAGGPGGASQPQLH*RLSLLCAGLTRVCA
Trigger: TGCACAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGACTGGCTCCCCCTGGCCCACCAGCTTTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS-3UTR CAA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAGATCCCAAGACATCGTaGAGTCCACAGCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: FSWARMCPALQHGIKKEVDPKTS*SPQPGW
Trigger: CCAGCCAGGCTGTGGACTCAACGATGTCTTGGGATC...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GCAGTATGGTCAGTGCAACCCATGAGAACCCCAACAGCTAGGGCCCGAGCAAGACTATTACAACGGTTCTaGCGGCAGCTCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: AVWSVQPMRTPTARARARLLQRF*RQLRQI
Trigger: GATCTGTCTGAGCTGCCGCAAGAACCGTTGTAATAG...TCTTGCTCGGGCCCTAGCTGTTGGGGTTCTCATGGGTTGCACTGACCATACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTGCTTCCAGAGTCTTCTaGCAGCCCTTTCCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: LSSMGLDSRKSCCLAGKTASRVF*QPFPSA
Trigger: TGCAGAGGGAAAGGGCTGCAAGAAGACTCTGGAAGC...AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAAAGAGGAAGTCTACCTaGAAGGAGAGAGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: PSAPGSRLRRILPLGGSSKRKST*KEREAA
Trigger: TGCTGCCTCTCTCTCCTTCAAGGTAGACTTCCTCTT...TGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS TCA 90 bp AAGCGATTGGAGTCAGTGCACTGGAAGGCAAAACTCGGCTTGTCCTaGTTCACCAGAGAGTCAACAAAGAGGTGGACGGCTCGCTCATGC +
Preference number: 5 (lower is better)
Translates to: KRLESVHWKAKLGLS*FTRESTKRWTARSC
Trigger: GCATGAGCGAGCCGTCCACCTCTTTGTTGACTCTCTGGTGAATCAGGACAAGCCGAGTTTTGCCTTCCAGTGCACTGACTCCAATCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCGAGTGTCAACGGCTaGCCCCAGAACGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCASVNG*PQNEIC
Trigger: GCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCGC...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR CAA 90 bp GCTTGGTGTCACACTTCCTCCCGAATCTCAGCCATAAAAAGTCCAACCGTTGGCTCATGCTCTGGGTCCTaGGAGGTGCGGAGGTTAAAC +
Preference number: 5 (lower is better)
Translates to: AWCHTSSRISAIKSPTVGSCSGS*EVRRLN
Trigger: GTTTAACCTCCGCACCTCCAAGGACCCAGAGCATGA...GCCAACGGTTGGACTTTTTATGGCTGAGATTCGGGAGGAAGTGTGACACCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTCATGCTCTGGGTCCTaGGAGGTGCGGAGGTTAAAC +
Preference number: 5 (lower is better)
Translates to: ARMCPALQHGIKKEVLRASCSGS*EVRRLN
Trigger: GTTTAACCTCCGCACCTCCAAGGACCCAGAGCATGA...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCGTTCCTTTCACGAAGTaGCCTGCATACCCGGCCACG +
Preference number: 5 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFVPFTK*PAYPAT
Trigger: CGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAAC...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp AGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTGATCCCAAGACATCGTaGAGTCCACAGCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: RVKAEKNPSIGWVLSSNFDPKTS*SPQPGW
Trigger: CCAGCCAGGCTGTGGACTCAACGATGTCTTGGGATC...AAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp ATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTAAGACAGATCCCCTTTTaGAAGCGATTGGAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: IVLATSPGLGCALLCSMVRQIPF*KRLESV
Trigger: CACTGACTCCAATCGCTTCAAAAAGGGGATCTGTCT...TACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAAGAAGAATCCTTCCATaGGGTGGGTCCTCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: SAPGSRLRRILPLGGSSARRILP*GGSSAV
Trigger: TACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCAGGGTCACCTGTGTGCAGTTTATaGTGTGCCTGTTATAAGTCA +
Preference number: 5 (lower is better)
Translates to: ARSPSHHRRPVVPSAPGSPVCSL*CACYKS
Trigger: TGACTTATAACAGGCACACAATAAACTGCACACAGG...TGACCCTGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS TCA 90 bp TTAAGGGCCTTCCTCAGGGACACTCCAGGGACTGAAGGTTACCTCTaGAAGGCATGCCTGCCCGGGTTTTTAGGTACATTTTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LRAFLRDTPGTEGYL*KACLPGFLGTFCCS
Trigger: GGAACAGCAAAATGTACCTAAAAACCCGGGCAGGCATGCCTTTCAGAGGTAACCTTCAGTCCCTGGAGTGTCCCTGAGGAAGGCCCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS TCA 90 bp CATGACCTGCATTTCTTAAGAAGATTGGGTTTGAGATCCTGCTGGTaGCAGGAGACTCCCTCTCATCCCCCAGTACCTGCAGCCAGTCGA +
Preference number: 5 (lower is better)
Translates to: HDLHFLRRLGLRSCW*QETPSHPPVPAASR
Trigger: TCGACTGGCTGCAGGTACTGGGGGATGAGAGGGAGTCTCCTGTCACCAGCAGGATCTCAAACCCAATCTTCTTAAGAAATGCAGGTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579750.1
CDS GCA 90 bp CATTGGGGTAGATGTCAATGTGGCCCACAGGCATCTGAATACCAATaGTCAAGCCGAAGGAACGCGTGTAGGTGTGGAGGACATCCACAA +
Preference number: 5 (lower is better)
Translates to: HWGRCQCGPQASEYQ*SSRRNACRCGGHPQ
Trigger: TTGTGGATGTCCTCCACACCTACACGCGTTCCTTCGGCTTGAGCATTGGTATTCAGATGCCTGTGGGCCACATTGACATCTACCCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCAACAAAAACCACCTCTaGGTGTTTCCAGCAATCCCG +
Preference number: 5 (lower is better)
Translates to: RFDWIVLATSPGLGCALLNKNHL*VFPAIP
Trigger: CGGGATTGCTGGAAACACCAAGAGGTGGTTTTTGTT...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR CAA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCAACCTCACAGATGGTTaGACCTCAGTCTGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: RFDWIVLATSPGLGCALLNLTDG*TSVCVA
Trigger: AGCTACACAGACTGAGGTCAAACCATCTGTGAGGTT...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGTCATGCTCTGGGTCCTaGGAGGTGCGGAGGTTAAAC +
Preference number: 5 (lower is better)
Translates to: WARMCPALQHGIKKEVLRSCSGS*EVRRLN
Trigger: GTTTAACCTCCGCACCTCCAAGGACCCAGAGCATGA...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTTGCCCGGGCACCGTTTTAGCTGTCATGTaGAAACTGCAGTCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: GLDSRKSCCLAGKTCPGTVLAVM*KLQSSK
Trigger: CTTAGAAGACTGCAGTTTCAACATGACAGCTAAAAC...GGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAAGACAGATCCCCTTTTaGAAGCGATTGGAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SAPGSRLRRILPLGGSSARQIPF*KRLESV
Trigger: CACTGACTCCAATCGCTTCAAAAAGGGGATCTGTCT...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCAGACAGATCCCCTTTTaGAAGCGATTGGAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: RFDWIVLATSPGLGCALLRQIPF*KRLESV
Trigger: CACTGACTCCAATCGCTTCAAAAAGGGGATCTGTCT...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp CCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTAGAAGAATCCTTCCATaGGGTGGGTCCTCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: PVVPSAPGSRLRRILPLGRRILP*GGSSAV
Trigger: TACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT...ACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp TCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCATCACAGGAGACCAGTaGTTCCCAGTGCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SRLRRILPLGGSSAVTFLITGDQ*FPVLQG
Trigger: ACCCTGGAGCACTGGGAACAACTGGTCTCCTGTGAT...GAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GCGAGGAGTCCCAGCCATCACAGGAGACCAGTTGTTCCCAGTGCTCCAGGGTCAACTAGAAGGAGGATATaGAATGTTCCCAACACAAAG +
Preference number: 5 (lower is better)
Translates to: ARSPSHHRRPVVPSAPGSTRRRI*NVPNTK
Trigger: CTTTGTGTTGGGAACATTCAATATCCTCCTTCTAGT...TGACCCTGGAGCACTGGGAACAACTGGTCTCCTGTGATGGCTGGGACTCCTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGGGGGCTTCAGCTTGTTaGGAGAGTCAAAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGGASAC*ESQRKS
Trigger: GGACTTCCTTTGACTCTCCAAACAAGCTGAAGCCCC...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp ACACCGGTAATCCCGACAGTTTGGAAGGCTGAGGTAGGTGGATCACTTGAGGTCTATGGCATCTGTCCATaGCCTCTGGCCATGAGCAAT +
Preference number: 5 (lower is better)
Translates to: TPVIPTVWKAEVGGSLEVYGICP*PLAMSN
Trigger: ATTGCTCATGGCCAGAGGCAATGGACAGATGCCATA...GACCTCAAGTGATCCACCTACCTCAGCCTTCCAAACTGTCGGGATTACCGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp ATGAGTCAGCTCCTGTCGGAAGGACTTCTCACTGAGGCTCAAAGCAGGCTGAGCACAAGCCCACTGAAGTaGCCTTGGGATAATAACCAG +
Preference number: 5 (lower is better)
Translates to: MSQLLSEGLLTEAQSRLSTSPLK*PWDNNQ
Trigger: CTGGTTATTATCCCAAGGCAACTTCAGTGGGCTTGT...GCTCAGCCTGCTTTGAGCCTCAGTGAGAAGTCCTTCCGACAGGAGCTGACTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTCAGTCTGTGTAGCTTaGGGTTTGTGGAGCTTATCG +
Preference number: 5 (lower is better)
Translates to: RFDWIVLATSPGLGCALLSVCVA*GLWSLS
Trigger: CGATAAGCTCCACAAACCCAAAGCTACACAGACTGA...GAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS GCA 90 bp GGGAGCCAGTCAACCACAACTACATTGGCGTCTTTCTCTCTTGTGTaGAGGGCTGACACGAGTTTGTGCAGCCAGTTTTCAAAGATACCG +
Preference number: 5 (lower is better)
Translates to: GSQSTTTTLASFSLV*RADTSLCSQFSKIP
Trigger: CGGTATCTTTGAAAACTGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGACTGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS CCA 90 bp AACCTCACAGATGGTTTGACCTCAGTCTGTGTAGCTTTGGGTTTGTaGAGCTTATCTGCTCGGAATGCTCGCTCCGCCACTAGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: NLTDGLTSVCVALGL*SLSARNARSATSCK
Trigger: TTTGCAGCTAGTGGCGGAGCGAGCATTCCGAGCAGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGTGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583083.1
CDS-3UTR CAA 90 bp AGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGAGGGCTGACACGAGTTaGTGCAGCCAGTTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SSNFPPWAWIAGSLAALLRADTS*CSQFSK
Trigger: CTTTGAAAACTGGCTGCACAAACTCGTGTCAGCCCT...CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCATCAACCACAACTACATaGGCGTCTTTCTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: SAPGSRLRRILPLGGSSASTTTT*ASFSLV
Trigger: CACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGA...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTACCCTTTTTGAAGCGATaGGAGTCAGTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: FSWARMCPALQHGIKKEVPFLKR*ESVHWK
Trigger: CTTCCAGTGCACTGACTCCAATCGCTTCAAAAAGGG...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp TCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCTTTCCTCCATGGGCTaGGATAGCAGGAAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: SRLRRILPLGGSSAVTFLLSSMG*DSRKSC
Trigger: GCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG...GAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGCTCCCAACAGATCCCTaGTGGAAGTCAGCTACACAG +
Preference number: 5 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRLPTDP*WKSATQ
Trigger: CTGTGTAGCTGACTTCCACAAGGGATCTGTTGGGAG...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp TTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTAGGCGGCTTAGGGATGTaGGGAAAACTAAGAGTTCAC +
Preference number: 5 (lower is better)
Translates to: FSWARMCPALQHGIKKEVGGLGM*GKLRVH
Trigger: GTGAACTCTTAGTTTTCCCAACATCCCTAAGCCGCC...TACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CAA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTGTGTAGCTTTGGGTTaGTGGAGCTTATCGCGTGGA +
Preference number: 5 (lower is better)
Translates to: ARMCPALQHGIKKEVLRACVALG*WSLSRG
Trigger: TCCACGCGATAAGCTCCACAAACCCAAAGCTACACA...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CAA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGACTGATTTGCAACGATTaGATTGGATTGTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: LATSPGLGCALLCSMVLRLICND*IGLCWP
Trigger: TGGCCAGCACAATCCAATCAAATCGTTGCAAATCAG...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS GCA 90 bp CTGCTCGATCCGCTCCACTATTTCCAGTGGCAGAGTCTGGGAATCTaGATTAGTGCCATAAAGGGTGACGTAAAAGGTGGGCTCAATTTC +
Preference number: 5 (lower is better)
Translates to: LLDPLHYFQWQSLGI*ISAIKGDVKGGLNF
Trigger: GAAATTGAGCCCACCTTTTACGTCACCCTTTATGGCACTAATGCAGATTCCCAGACTCTGCCACTGGAAATAGTGGAGCGGATCGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp AGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGAACAAAAACCACCTCTaGGTGTTTCCAGCAATCCCG +
Preference number: 5 (lower is better)
Translates to: SSNFPPWAWIAGSLAALLNKNHL*VFPAIP
Trigger: CGGGATTGCTGGAAACACCAAGAGGTGGTTTTTGTT...CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGAACCTCACAGATGGTTaGACCTCAGTCTGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWNLTDG*TSVCVA
Trigger: AGCTACACAGACTGAGGTCAAACCATCTGTGAGGTT...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCGATCCCAAGACATCGTaGAGTCCACAGCCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLDPKTS*SPQPGW
Trigger: CCAGCCAGGCTGTGGACTCAACGATGTCTTGGGATC...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGCTATTACAACGGTTCTaGCGGCAGCTCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: WARMCPALQHGIKKEVLRLLQRF*RQLRQI
Trigger: GATCTGTCTGAGCTGCCGCAAGAACCGTTGTAATAG...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGGGTGTGGACAGAGGTTaGGAGTTAGAGCTATTCAAG +
Preference number: 5 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGGVDRG*ELELFK
Trigger: CTTGAATAGCTCTAACTCCAAACCTCTGTCCACACC...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp AAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCAGTCTGGGGCTTCAGCTaGTTTGGAGAGTCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: KAEKNPSIGWVLSSNFPPVWGFS*FGESKE
Trigger: TTCCTTTGACTCTCCAAACAAGCTGAAGCCCCAGAC...TGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTAATCCTATATGGAATTaGGGGCAGCCTAAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: PVVPSAPGSRLRRILPLGNPIWN*GQPKQK
Trigger: CTTCTGCTTAGGCTGCCCCAAATTCCATATAGGATT...ACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGCTCTCCTTCCCTTTATaGATCCGGGTCCTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLLSFPL*IRVLRQ
Trigger: CTGCCGCAGGACCCGGATCAATAAAGGGAAGGAGAG...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS TCA 90 bp GTCAACCACAACTACATTGGCGTCTTTCTCTCTTGTGTGCAGGGCTaGCACGAGTTTGTGCAGCCAGTTTTCAAAGATACCGCTCATCGT +
Preference number: 5 (lower is better)
Translates to: VNHNYIGVFLSCVQG*HEFVQPVFKDTAHR
Trigger: ACGATGAGCGGTATCTTTGAAAACTGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS-3UTR CAA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATAGCGAGTGTCAACGGCTaGCCCCAGAACGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIIASVNG*PQNEIC
Trigger: GCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCGC...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp GCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTCAGTCTGTGTAGCTTaGGGTTTGTGGAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: ARMCPALQHGIKKEVLRASVCVA*GLWSLS
Trigger: AGATAAGCTCCACAAACCCAAAGCTACACAGACTGA...GGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580036.5
CDS-3UTR CAA 90 bp CTGGCCACTTCTCCTGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAGTTTTAGCTGTCATGTaGAAACTGCAGTCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: LATSPGLGCALLCSMVLRVLAVM*KLQSSK
Trigger: CTTAGAAGACTGCAGTTTCAACATGACAGCTAAAAC...TCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCAGGAGAAGTGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTAGGGCTGACACGAGTTaGTGCAGCCAGTTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCRADTS*CSQFSK
Trigger: CTTTGAAAACTGGCTGCACAAACTCGTGTCAGCCCT...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCTGGCGTCTTTCTCTCTaGTGTGCAGGGCTGACACGA +
Preference number: 5 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLWRLSL*CAGLTR
Trigger: TCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCA...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTCCCTTTTTGAAGCGATaGGAGTCAGTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCPFLKR*ESVHWK
Trigger: CTTCCAGTGCACTGACTCCAATCGCTTCAAAAAGGG...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTCTATTACAACGGTTCTaGCGGCAGCTCAGACAGATC +
Preference number: 5 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCLLQRF*RQLRQI
Trigger: GATCTGTCTGAGCTGCCGCAAGAACCGTTGTAATAG...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGTTCTAGTACCTACTTaGTATCCATCCTTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSIVLVPT*YPSFQG
Trigger: CCCTTGGAAGGATGGATACAAAGTAGGTACTAGAAC...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGATGAGCACTCACTCCTaGGCGAGTGAAATCAAGCAT +
Preference number: 5 (lower is better)
Translates to: WARMCPALQHGIKKEVLRMSTHS*ASEIKH
Trigger: ATGCTTGATTTCACTCGCCAAGGAGTGAGTGCTCAT...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS-3UTR CAA 90 bp AGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGCCTTCAACGATTTGATTGGATaGTGCTGGCCACTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: RMCPALQHGIKKEVLRAFNDLIG*CWPLLL
Trigger: CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTT...GAAGGCCCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGTCAGTCTGTGTAGCTTaGGGTTTGTGGAGCTTATCT +
Preference number: 5 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRSVCVA*GLWSLS
Trigger: AGATAAGCTCCACAAACCCAAAGCTACACAGACTGA...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGGCAAGACTGTTTTTAGGTACATTTaGCTGTTCCTCTTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: LSSMGLDSRKSCCLAGKTVFRYI*LFLLFL
Trigger: GAGGAACAAGAGGAACAGCAAAATGTACCTAAAAAC...AGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp AGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCACTAAACAGAAGAGATTaGCTCCAAAGCAGTTATATC +
Preference number: 5 (lower is better)
Translates to: SAPGSRLRRILPLGGSSALNRRD*LQSSYI
Trigger: GATATAACTGCTTTGGAGCAAATCTCTTCTGTTTAG...TGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTTGTACAAGCTTCGCTTaGGCTAGAAAGCAATCACAG +
Preference number: 5 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLCTSFA*ARKQSQ
Trigger: CTGTGATTGCTTTCTAGCCAAAGCGAAGCTTGTACA...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp AGCAGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTTGCTGTGGTTCTTTAGTGAATaGCTGTCCACTTCTGCTAAC +
Preference number: 5 (lower is better)
Translates to: SSNFPPWAWIAGSLAALLWFFSE*LSTSAN
Trigger: GTTAGCAGAAGTGGACAGCAATTCACTAAAGAACCA...CAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp TCTGGACCAGGTAAAGGTCTACTAGCCATTGACAATGTGCATGACTTCAGTTCAGAACCTGCAGCCCTCTaGGCCTGTAGAATAGAACCT +
Preference number: 5 (lower is better)
Translates to: SGPGKGLLAIDNVHDFSSEPAAL*ACRIEP
Trigger: AGGTTCTATTCTACAGGCCAAGAGGGCTGCAGGTTC...TGAACTGAAGTCATGCACATTGTCAATGGCTAGTAGACCTTTACCTGGTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTAACGATTTGATTGGATaGTGCTGGCCACTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCNDLIG*CWPLLL
Trigger: CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTT...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS TCA 90 bp GGACACACAAGTGTGGGGAGAACTATCAAAGTGTCCTCTTTGCCTTaGTCTAGAAATACAAGAGAGACACTGTATTGGCAGAAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: GHTSVGRTIKVSSLP*SRNTRETLYWQKGG
Trigger: GCCCCCTTTCTGCCAATACAGTGTCTCTCTTGTATTTCTAGATCAAGGCAAAGAGGACACTTTGATAGTTCTCCCCACACTTGTGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS-3UTR CAA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGATTTTGCTGTTCCTCTaGTTCCTCATTTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGILLFL*FLIFLA
Trigger: TGCCAAGAAAATGAGGAACAAGAGGAACAGCAAAAT...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp GAGACCAGTTGTTCCCAGTGCTCCAGGGTCAAGGCTGAGAAGAATCCTTCCATTGTTTTTAGGTACATTTaGCTGTTCCTCTTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: ETSCSQCSRVKAEKNPSIVFRYI*LFLLFL
Trigger: GAGGAACAAGAGGAACAGCAAAATGTACCTAAAAAC...AATGGAAGGATTCTTCTCAGCCTTGACCCTGGAGCACTGGGAACAACTGGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGGGAAGTCAAATGCATTaGGAAAATGGAGCACTTGAG +
Preference number: 5 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRGSQMH*ENGALE
Trigger: CTCAAGTGCTCCATTTTCCAAATGCATTTGACTTCC...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTCTGATTTGCAACGATTaGATTGGATTGTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCLICND*IGLCWP
Trigger: TGGCCAGCACAATCCAATCAAATCGTTGCAAATCAG...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGAACCTCACAGATGGTTaGACCTCAGTCTGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLNLTDG*TSVCVA
Trigger: AGCTACACAGACTGAGGTCAAACCATCTGTGAGGTT...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp AGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGCTTGTTTTAGCTGTCATGTaGAAACTGCAGTCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: RRILPLGGSSAVTFLHGLVLAVM*KLQSSK
Trigger: CTTAGAAGACTGCAGTTTCAACATGACAGCTAAAAC...AAGCCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS-3UTR CAA 90 bp TGGGCTAGGATGTGCCCTGCTCTGCAGCATGGTATTAAGAAGGAGGTATTAAGGGTTTTTAGGTACATTTaGCTGTTCCTCTTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: WARMCPALQHGIKKEVLRVFRYI*LFLLFL
Trigger: GAGGAACAAGAGGAACAGCAAAATGTACCTAAAAAC...CCTTAATACCTCCTTCTTAATACCATGCTGCAGAGCAGGGCACATCCTAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GCTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGAATCAAGATCTAGAATaGGTGGCTTTTCCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: AEKNPSIGWVLSSNFPPWNQDLE*VAFPRS
Trigger: ACTTCTTGGAAAAGCCACCAATTCTAGATCTTGATT...CCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp AAAAAGCAGATCAGGGACAACCTGGGGAGAGGGCAGTGGGAAGAATTACAAAGGCCCAGGATTTTATTTTaGTCTCACACTGTCCTCTTA +
Preference number: 5 (lower is better)
Translates to: KKQIRDNLGRGQWEELQRPRILF*SHTVLL
Trigger: TAAGAGGACAGTGTGAGACAAAAATAAAATCCTGGG...CCTTTGTAATTCTTCCCACTGCCCTCTCCCCAGGTTGTCCCTGATCTGCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CTGAGAAGAATCCTTCCATTGGGTGGGTCCTCAGCAGTAACTTTCCTCCATGGGTACCCAATAGGTATTTaGGAATTCATCTTTGTTGCG +
Preference number: 5 (lower is better)
Translates to: LRRILPLGGSSAVTFLHGYPIGI*EFIFVA
Trigger: CGCAACAAAGATGAATTCCAAAATACCTATTGGGTA...CCCATGGAGGAAAGTTACTGCTGAGGACCCACCCAATGGAAGGATTCTTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGTCAACCACAACTACATaGGCGTCTTTCTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLSTTTT*ASFSLV
Trigger: CACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGA...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp GCACAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCTCAACCACAACTACATaGGCGTCTTTCTCTCTTGTG +
Preference number: 5 (lower is better)
Translates to: AQCNLICNDLIGLCWPLLSTTTT*ASFSLV
Trigger: CACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGA...GAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATACCCTTTTTGAAGCGATaGGAGTCAGTGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIIPFLKR*ESVHWK
Trigger: CTTCCAGTGCACTGACTCCAATCGCTTCAAAAAGGG...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp TTAGAACCAGCTCTGTCTGGCAGGTGCCGGTTTCTGTGTACACAGATGTGTATTATTTTGCTGTTCCTCTaGTTCCTCATTTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LEPALSGRCRFLCTQMCIILLFL*FLIFLA
Trigger: TGCCAAGAAAATGAGGAACAAGAGGAACAGCAAAAT...AATACACATCTGTGTACACAGAAACCGGCACCTGCCAGACAGAGCTGGTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp GATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGGGCTAGGATGTGTTTTTAGGTACATTTaGCTGTTCCTCTTGTTCCTC +
Preference number: 5 (lower is better)
Translates to: DLQRFDWIVLATSPGLGCVFRYI*LFLLFL
Trigger: GAGGAACAAGAGGAACAGCAAAATGTACCTAAAAAC...ACATCCTAGCCCAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp AGGTGCCGGTTTCTGTGTACACAGATGTGTATTACATATGTCATAACTTCTATCTCTCTATGGCAACCGTaGCTGCCATGGAAACCACTG +
Preference number: 5 (lower is better)
Translates to: RCRFLCTQMCITYVITSISLWQP*LPWKPL
Trigger: CAGTGGTTTCCATGGCAGCAACGGTTGCCATAGAGA...GATAGAAGTTATGACATATGTAATACACATCTGTGTACACAGAAACCGGCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp CAGTGTAATCTGATTTGCAACGATTTGATTGGATTGTGCTGGCCACTTCTCCTGATTTTGCTGTTCCTCTaGTTCCTCATTTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: QCNLICNDLIGLCWPLLLILLFL*FLIFLA
Trigger: TGCCAAGAAAATGAGGAACAAGAGGAACAGCAAAAT...CAGGAGAAGTGGCCAGCACAATCCAATCAAATCGTTGCAAATCAGATTACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS-3UTR CAA 90 bp CTAGGCATGTGGCTGAACCTCACTAAGCCTCAGTTTTGTAAAATAGGGATAATATTGTCAGACTCTAGGTaGGGGCAGCTATATTCTTTC +
Preference number: 5 (lower is better)
Translates to: LGMWLNLTKPQFCKIGIILSDSR*GQLYSF
Trigger: GAAAGAATATAGCTGCCCCAACCTAGAGTCTGACAA...TATTATCCCTATTTTACAAAACTGAGGCTTAGTGAGGTTCAGCCACATGCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS-3UTR CAA 90 bp GTGGTGGTATGTTCACAATCTCGATGTGGTAATGCTTTCAGTTTCATGATGATTAAATTTCCTTTTGATTaGACCTACTGCCTCCATGCA +
Preference number: 5 (lower is better)
Translates to: VVVCSQSRCGNAFSFMMIKFPFD*TYCLHA
Trigger: TGCATGGAGGCAGTAGGTCAAATCAAAAGGAAATTT...AATCATCATGAAACTGAAAGCATTACCACATCGAGATTGTGAACATACCACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261292.9
CDS CCA 90 bp TTCCTTAGTCATCTTTCCTGGGTGTGTCCAATCTACATGGTTGTCTaGAGGATCAATGAAGTTAATATATGTGGAAACACTTTGAAATGT +
Preference number: 5 (lower is better)
Translates to: FLSHLSWVCPIYMVV*RINEVNICGNTLKC
Trigger: ACATTTCAAAGTGTTTCCACATATATTAACTTCATTGATCCTCCAGACAACCATGTAGATTGGACACACCCAGGAAAGATGACTAAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS GCA 72 bp CTGCGGACGCAGGGCGGGTACGAGAGGCTGAGAGGCTaGGTCCCGCCATCCAGCCTCGCTCCAGCCGGGAGG +
Preference number: 6 (lower is better)
Translates to: LRTQGGYERLRG*VPPSSLAPAGR
Trigger: CCTCCCGGCTGGAGCGAGGCTGGATGGCGGGACGCAGCCTCTCAGCCTCTCGTACCCGCCCTGCGTCCGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS GCA 72 bp GAGCGGGGACTGAGCCCGGAACACCGACGGGGCGGCTaGGCCAACAACCACTGCGGACGCAGGGCGGGTACG +
Preference number: 6 (lower is better)
Translates to: ERGLSPEHRRGG*ANNHCGRRAGT
Trigger: CGTACCCGCCCTGCGTCCGCAGTGGTTGTTGGCGCAGCCGCCCCGTCGGTGTTCCGGGCTCAGTCCCCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CAA 90 bp GGCGGCACGGAGCCCGGGCGGTGGCAGGGAGCGAGTGTCAACGGCTaGCCCCAGAACGAGATCTGCCCTCGTCCTGAGCCGCCGGGAGGC +
Preference number: 6 (lower is better)
Translates to: GGTEPGRWQGASVNG*PQNEICPRPEPPGG
Trigger: GCCTCCCGGCGGCTCAGGACGAGGGCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCGCTCCCTGCCACCGCCCGGGCTCCGTGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CCA 72 bp GGAGGGAGAACTTGGCCCGGAGTCTGCGTCTGGCGCTaGGGAGCGGGGACTGAGCCCGGAACACCGACGGGG +
Preference number: 6 (lower is better)
Translates to: GGRTWPGVCVWR*GAGTEPGTPTG
Trigger: CCCCGTCGGTGTTCCGGGCTCAGTCCCCGCTCCCCAGCGCCAGACGCAGACTCCGGGCCAAGTTCTCCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 72 bp GCGAGCGGAGGGAGAACTTGGCCCGGAGTCTGCGTCTaGCGCTGGGGAGCGGGGACTGAGCCCGGAACACCG +
Preference number: 6 (lower is better)
Translates to: ASGGRTWPGVCV*RWGAGTEPGTP
Trigger: CGGTGTTCCGGGCTCAGTCCCCGCTCCCCAGCGCCAGACGCAGACTCCGGGCCAAGTTCTCCCTCCGCTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS GCA 72 bp CTCCCTCCCTTCCCGCCTAGCGAGGGCCGCAACAGGTaGAGAAGGCGCGGCCGCACAATAACCCGGCGGAGC +
Preference number: 6 (lower is better)
Translates to: LPPFPPSEGRNR*RRRGRTITRRS
Trigger: GCTCCGCCGGGTTATTGTGCGGCCGCGCCTTCTGCACCTGTTGCGGCCCTCGCTAGGCGGGAAGGGAGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 72 bp GTCCTGCGGCAGAAAGCAGCGAGCGGAGGGAGAACTTaGCCCGGAGTCTGCGTCTGGCGCTGGGGAGCGGGG +
Preference number: 6 (lower is better)
Translates to: VLRQKAASGGRT*PGVCVWRWGAG
Trigger: CCCCGCTCCCCAGCGCCAGACGCAGACTCCGGGCCAAGTTCTCCCTCCGCTCGCTGCTTTCTGCCGCAGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS GCA 72 bp AGCCCGGGCGGTGGCAGGGAGCGAGTGTCAACGGCTTaGCCCAGAACGAGATCTGCCCTCGTCCTGAGCCGC +
Preference number: 6 (lower is better)
Translates to: SPGGGRERVSTA*PRTRSALVLSR
Trigger: GCGGCTCAGGACGAGGGCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCGCTCCCTGCCACCGCCCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CAA 72 bp GAGCCCGGGCGGTGGCAGGGAGCGAGTGTCAACGGCTaGCCCCAGAACGAGATCTGCCCTCGTCCTGAGCCG +
Preference number: 6 (lower is better)
Translates to: EPGRWQGASVNG*PQNEICPRPEP
Trigger: CGGCTCAGGACGAGGGCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCGCTCCCTGCCACCGCCCGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CCA 72 bp CGCGGAGCTCGTGGCAGGCGCTCTCCTACGGTGGGGTaGAGGGCTACGGGAACACCAGGCGACCTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: RGARGRRSPTVG*RATGTPGDLLK
Trigger: TTTGAGGAGGTCGCCTGGTGTTCCCGTAGCCCTCCACCCCACCGTAGGAGAGCGCCTGCCACGAGCTCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000583083.1
CDS CCA 72 bp AGCCACACTCTCTCTGGGAGTGGTCTATCCGCTCCCTaGGCCGGGAGTCCGTCGGGGGAGAGCCACCTGGTC +
Preference number: 6 (lower is better)
Translates to: SHTLSGSGLSAP*AGSPSGESHLV
Trigger: GACCAGGTGGCTCTCCCCCGACGGACTCCCGGCCCAGGGAGCGGATAGACCACTCCCAGAGAGAGTGTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS GCA 72 bp GGAGCGAGTGTCAACGGCTTGCCCCAGAACGAGATCTaGCCTCGTCCTGAGCCGCCGGGAGGCAAGGACTCG +
Preference number: 6 (lower is better)
Translates to: GASVNGLPQNEI*PRPEPPGGKDS
Trigger: CGAGTCCTTGCCTCCCGGCGGCTCAGGACGAGGGCAGATCTCGTTCTGGGGCAAGCCGTTGACACTCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CCA 72 bp TCACGTAGCAAAGCACTTAGCGAGGCGCGGAGCTCGTaGCAGGCGCTCTCCTACGGTGGGGTGGAGGGCTAC +
Preference number: 6 (lower is better)
Translates to: SRSKALSEARSS*QALSYGGVEGY
Trigger: GTAGCCCTCCACCCCACCGTAGGAGAGCGCCTGCCACGAGCTCCGCGCCTCGCTAAGTGCTTTGCTACGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000583083.1
CDS CCA 72 bp CCTCTCCAAGGCTCAAAGCCACACTCTCTCTGGGAGTaGTCTATCCGCTCCCTGGGCCGGGAGTCCGTCGGG +
Preference number: 6 (lower is better)
Translates to: PLQGSKPHSLWE*SIRSLGRESVG
Trigger: CCCGACGGACTCCCGGCCCAGGGAGCGGATAGACCACTCCCAGAGAGAGTGTGGCTTTGAGCCTTGGAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS TCA 72 bp CACTGCCATCCCAAGTGGCGGAGGCGGACATTTCCCTaGAACTCTGCGTCCGCTGGGGAGGCGATCCCTGGA +
Preference number: 6 (lower is better)
Translates to: HCHPKWRRRTFP*NSASAGEAIPG
Trigger: TCCAGGGATCGCCTCCCCAGCGGACGCAGAGTTTCAGGGAAATGTCCGCCTCCGCCACTTGGGATGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS GCA 72 bp TGTGATTCGGCCCACCGTTCCTTTCACGAAGTTGCCTaGATACCCGGCCACGTGCGCTCCGAGGCTGTAGCC +
Preference number: 6 (lower is better)
Translates to: CDSAHRSFHEVA*IPGHVRSEAVA
Trigger: GGCTACAGCCTCGGAGCGCACGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAACGGTGGGCCGAATCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000580036.5
CDS GCA 72 bp TCCCAAGTGGCGGAGGCGGACATTTCCCTGAAACTCTaGGTCCGCTGGGGAGGCGATCCCTGGAGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: SQVAEADISLKL*VRWGGDPWRRR
Trigger: TCTCCTTCTCCAGGGATCGCCTCCCCAGCGGACGCAGAGTTTCAGGGAAATGTCCGCCTCCGCCACTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 72 bp GAGCATCCTCTCCAAGGCTCAAAGCCACACTCTCTCTaGGAGTGGTCTATCCGCTCCCTGGGCCGGGAGTCC +
Preference number: 6 (lower is better)
Translates to: EHPLQGSKPHSL*EWSIRSLGRES
Trigger: GGACTCCCGGCCCAGGGAGCGGATAGACCACTCCCAGAGAGAGTGTGGCTTTGAGCCTTGGAGAGGATGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 72 bp GCGGAGGCGGACATTTCCCTGAAACTCTGCGTCCGCTaGGGAGGCGATCCCTGGAGAAGGAGAGCATCCTCT +
Preference number: 6 (lower is better)
Translates to: AEADISLKLCVR*GGDPWRRRASS
Trigger: AGAGGATGCTCTCCTTCTCCAGGGATCGCCTCCCCAGCGGACGCAGAGTTTCAGGGAAATGTCCGCCTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CAA 90 bp CGGGAACACCAGGCGACCTCCTCAAAGGGACCAGTGAGCCGAGATTaGGAGTCTAAGACGCGTGGCCAGAGCCCAGTGTCTGCCGATGAG +
Preference number: 6 (lower is better)
Translates to: REHQATSSKGPVSRD*ESKTRGQSPVSADE
Trigger: CTCATCGGCAGACACTGGGCTCTGGCCACGCGTCTTAGACTCCAAATCTCGGCTCACTGGTCCCTTTGAGGAGGTCGCCTGGTGTTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CAA 72 bp AAACCTGTGATTCGGCCCACCGTTCCTTTCACGAAGTaGCCTGCATACCCGGCCACGTGCGCTCCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: KPVIRPTVPFTK*PAYPATCAPRL
Trigger: CAGCCTCGGAGCGCACGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAACGGTGGGCCGAATCACAGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS CAA 72 bp CCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTaGCTGGCAAGACTTGCCCGGGCACCCTCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: PPWAWIAGSLAA*LARLARAPSGK
Trigger: CTTCCCTGAGGGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000623277.1
CDS CAA 72 bp ATTGCTGTGATTCGGCCCACCGTTCCTTTCACGAAGTaGCCTGCATACCCGGCCACGTGCGCTCCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: IAVIRPTVPFTK*PAYPATCAPRL
Trigger: CAGCCTCGGAGCGCACGTGGCCGGGTATGCAGGCAACTTCGTGAAAGGAACGGTGGGCCGAATCACAGCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427224.6
CDS GCA 72 bp GCTCCCGTCCGGGGTTGCGGGGTTGAGACAGGTAGCTaGGAAACTCCTTCCACAGGTTGTACCAAGACTGAG +
Preference number: 6 (lower is better)
Translates to: APVRGCGVETGS*ETPSTGCTKTE
Trigger: CTCAGTCTTGGTACAACCTGTGGAAGGAGTTTCGCAGCTACCTGTCTCAACCCCGCAACCCCGGACGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS GCA 72 bp CTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTaGCTTGCTGGCAAGACTTGCCCGGGCACCCTCAGG +
Preference number: 6 (lower is better)
Translates to: LSSMGLDSRKSC*LAGKTCPGTLR
Trigger: CCTGAGGGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000623277.1
CDS CAA 72 bp GCGCCTGATATTCAGCTCCCGTCCGGGGTTGCGGGGTaGAGACAGGTAGCTGCGAAACTCCTTCCACAGGTT +
Preference number: 6 (lower is better)
Translates to: APDIQLPSGVAG*RQVAAKLLPQV
Trigger: AACCTGTGGAAGGAGTTTCGCAGCTACCTGTCTCAACCCCGCAACCCCGGACGGGAGCTGAATATCAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CAA 72 bp CAGGCGACCTCCTCAAAGGGACCAGTGAGCCGAGATTaGGAGTCTAAGACGCGTGGCCAGAGCCCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: QATSSKGPVSRD*ESKTRGQSPVS
Trigger: AGACACTGGGCTCTGGCCACGCGTCTTAGACTCCAAATCTCGGCTCACTGGTCCCTTTGAGGAGGTCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000583083.1
CDS CAA 90 bp CACCCGGATGCGCCTGATATTCAGCTCCCGTCCGGGGTTGCGGGGTaGAGACAGGTAGCTGCGAAACTCCTTCCACAGGTTGTACCAAGA +
Preference number: 6 (lower is better)
Translates to: HPDAPDIQLPSGVAG*RQVAAKLLPQVVPR
Trigger: TCTTGGTACAACCTGTGGAAGGAGTTTCGCAGCTACCTGTCTCAACCCCGCAACCCCGGACGGGAGCTGAATATCAGGCGCATCCGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS TCA 72 bp TCCTGGCAATGCTGTGTCCCACCACCCTGGTATTATTaGCCGCATCCGTGTAAAGCTGGTGGGCCAGGGGGA +
Preference number: 6 (lower is better)
Translates to: SWQCCVPPPWYY*PHPCKAGGPGG
Trigger: TCCCCCTGGCCCACCAGCTTTACACGGATGCGGTCAATAATACCAGGGTGGTGGGACACAGCATTGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS TCA 72 bp TACGGGAACACCAGGCGACCTCCTCAAAGGGACCAGTaGGCCGAGATTTGGAGTCTAAGACGCGTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: YGNTRRPPQRDQ*AEIWSLRRVAR
Trigger: TCTGGCCACGCGTCTTAGACTCCAAATCTCGGCTCACTGGTCCCTTTGAGGAGGTCGCCTGGTGTTCCCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000583083.1
CDS CCA 72 bp GCTGTGGCCGACGGAGAGGTAGCATCCTTCATGCTCTaGGTCCTTGGAGGTGCGGAGGTTAAACCTCACAGA +
Preference number: 6 (lower is better)
Translates to: AVADGEVASFML*VLGGAEVKPHR
Trigger: TCTGTGAGGTTTAACCTCCGCACCTCCAAGGACCCAGAGCATGAAGGATGCTACCTCTCCGTCGGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
ENST00000583083.1
CDS CCA 72 bp TCCACAAAATCTGCATCGTCCGGAGAGAGCCTCTTGTaGATGTCGGCCCCTTCAAACATGGGCCCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: STKSASSGESLL*MSAPSNMGPAG
Trigger: TCCTGCCGGGCCCATGTTTGAAGGGGCCGACATCCACAAGAGGCTCTCTCCGGACGATGCAGATTTTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS CCA 72 bp GCCATCCCGACACTTGCGAAACCAGAGCTCCCGGCCTaGGGATATGCTGGTGTTCTCAGGGTCTTCTGTACA +
Preference number: 6 (lower is better)
Translates to: AIPTLAKPELPA*GYAGVLRVFCT
Trigger: TGTACAGAAGACCCTGAGAACACCAGCATATCCCCAGGCCGGGAGCTCTGGTTTCGCAAGTGTCGGGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CAA 90 bp AGTAACTTTCCTCCATGGGCTTGGATAGCAGGAAGTCTTGCTGCCTaGCTGGCAAGACTTGCCCGGGCACCCTCAGGGAAGCTCCACAGT +
Preference number: 6 (lower is better)
Translates to: SNFPPWAWIAGSLAA*LARLARAPSGKLHS
Trigger: ACTGTGGAGCTTCCCTGAGGGTGCCCGGGCAAGTCTTGCCAGCAAGGCAGCAAGACTTCCTGCTATCCAAGCCCATGGAGGAAAGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000623277.1
CDS TCA 72 bp GGTATTAAGGGCCTTCCTCAGGGACACTCCAGGGACTaGAGGTTACCTCTGAAAGGCATGCCTGCCCGGGTT +
Preference number: 6 (lower is better)
Translates to: GIKGLPQGHSRD*RLPLKGMPARV
Trigger: AACCCGGGCAGGCATGCCTTTCAGAGGTAACCTTCAGTCCCTGGAGTGTCCCTGAGGAAGGCCCTTAATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577628.5
ENST00000580036.5
CDS GCA 72 bp GGAACGCGTGTAGGTGTGGAGGACATCCACAAAATCTaGATCGTCCGGAGAGAGCCTCTTGTGGATGTCGGC +
Preference number: 6 (lower is better)
Translates to: GTRVGVEDIHKI*IVRREPLVDVG
Trigger: GCCGACATCCACAAGAGGCTCTCTCCGGACGATGCAGATTTTGTGGATGTCCTCCACACCTACACGCGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS GCA 72 bp TGGTTTCGTTTTTCATCCTCCAGCCATCCCGACACTTaGGAAACCAGAGCTCCCGGCCTGGGGATATGCTGG +
Preference number: 6 (lower is better)
Translates to: WFRFSSSSHPDT*ETRAPGLGICW
Trigger: CCAGCATATCCCCAGGCCGGGAGCTCTGGTTTCGCAAGTGTCGGGATGGCTGGAGGATGAAAAACGAAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CAA 72 bp ACATCCACAAAATCTGCATCGTCCGGAGAGAGCCTCTaGTGGATGTCGGCCCCTTCAAACATGGGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: TSTKSASSGESL*WMSAPSNMGPA
Trigger: TGCCGGGCCCATGTTTGAAGGGGCCGACATCCACAAGAGGCTCTCTCCGGACGATGCAGATTTTGTGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS CAA 72 bp ACAGATGGTTTGACCTCAGTCTGTGTAGCTTTGGGTTaGTGGAGCTTATCGCGTGGACGCCGCACGCTCGGC +
Preference number: 6 (lower is better)
Translates to: TDGLTSVCVALG*WSLSRGRRTLG
Trigger: GCCGAGCGTGCGGCGTCCACGCGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CCA 72 bp CCAAGTCCTCCTCGGTGTAGACCAGGAAGGTGTTGGTaGCATTCTGCTCGATCCGCTCCACTATTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: PSPPRCRPGRCW*HSARSAPLFPV
Trigger: CACTGGAAATAGTGGAGCGGATCGAGCAGAATGCCACCAACACCTTCCTGGTCTACACCGAGGAGGACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CAA 90 bp AGACGCGTGGCCAGAGCCCAGTGTCTGCCGATGAGCACTCACTCCTaGGCGAGTGAAATCAAGCATCTCCTTTCTCTCTGTTCTCCATCA +
Preference number: 6 (lower is better)
Translates to: RRVARAQCLPMSTHS*ASEIKHLLSLCSPS
Trigger: TGATGGAGAACAGAGAGAAAGGAGATGCTTGATTTCACTCGCCAAGGAGTGAGTGCTCATCGGCAGACACTGGGCTCTGGCCACGCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CAA 72 bp GCCAGAGCCCAGTGTCTGCCGATGAGCACTCACTCCTaGGCGAGTGAAATCAAGCATCTCCTTTCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: ARAQCLPMSTHS*ASEIKHLLSLC
Trigger: ACAGAGAGAAAGGAGATGCTTGATTTCACTCGCCAAGGAGTGAGTGCTCATCGGCAGACACTGGGCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CAA 72 bp AACCTCACAGATGGTTTGACCTCAGTCTGTGTAGCTTaGGGTTTGTGGAGCTTATCGCGTGGACGCCGCACG +
Preference number: 6 (lower is better)
Translates to: NLTDGLTSVCVA*GLWSLSRGRRT
Trigger: CGTGCGGCGTCCACGCGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGTGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CAA 90 bp CGAGTGCTGCCTTCTCTCCCTAACCTGACAAGCCATAGATGCACTTaGAGAAACACCACACTGCAGCACCCTCTGGACCCTGAGTTGAGT +
Preference number: 6 (lower is better)
Translates to: RVLPSLPNLTSHRCT*RNTTLQHPLDPELS
Trigger: ACTCAACTCAGGGTCCAGAGGGTGCTGCAGTGTGGTGTTTCTCAAAGTGCATCTATGGCTTGTCAGGTTAGGGAGAGAAGGCAGCACTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS TCA 72 bp GAGTCAGTGCACTGGAAGGCAAAACTCGGCTTGTCCTaGTTCACCAGAGAGTCAACAAAGAGGTGGACGGCT +
Preference number: 6 (lower is better)
Translates to: ESVHWKAKLGLS*FTRESTKRWTA
Trigger: AGCCGTCCACCTCTTTGTTGACTCTCTGGTGAATCAGGACAAGCCGAGTTTTGCCTTCCAGTGCACTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000580036.5
CDS GCA 72 bp AGATGTCAATGTGGCCCACAGGCATCTGAATACCAATaGTCAAGCCGAAGGAACGCGTGTAGGTGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: RCQCGPQASEYQ*SSRRNACRCGG
Trigger: TCCTCCACACCTACACGCGTTCCTTCGGCTTGAGCATTGGTATTCAGATGCCTGTGGGCCACATTGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS GCA 72 bp GACACTTGCGAAACCAGAGCTCCCGGCCTGGGGATATaGTGGTGTTCTCAGGGTCTTCTGTACAAAATGTCA +
Preference number: 6 (lower is better)
Translates to: DTCETRAPGLGI*WCSQGLLYKMS
Trigger: TGACATTTTGTACAGAAGACCCTGAGAACACCAGCATATCCCCAGGCCGGGAGCTCTGGTTTCGCAAGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS GCA 72 bp GTGCTGCCTTCTCTCCCTAACCTGACAAGCCATAGATaGACTTTGAGAAACACCACACTGCAGCACCCTCTG +
Preference number: 6 (lower is better)
Translates to: VLPSLPNLTSHR*TLRNTTLQHPL
Trigger: CAGAGGGTGCTGCAGTGTGGTGTTTCTCAAAGTGCATCTATGGCTTGTCAGGTTAGGGAGAGAAGGCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS CCA 72 bp GATGGTTTGACCTCAGTCTGTGTAGCTTTGGGTTTGTaGAGCTTATCTGCTCGGAATGCTCGCTCCGCCACT +
Preference number: 6 (lower is better)
Translates to: DGLTSVCVALGL*SLSARNARSAT
Trigger: AGTGGCGGAGCGAGCATTCCGAGCAGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583083.1
CDS CAA 72 bp GCCAGTCAACCACAACTACATTGGCGTCTTTCTCTCTaGTGTGCAGGGCTGACACGAGTTTGTGCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: ASQPQLHWRLSL*CAGLTRVCAAS
Trigger: ACTGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS CAA 72 bp ACAGATGGTTTGACCTCAGTCTGTGTAGCTTTGGGTTaGTGGAGCTTATCTGCTCGGAATGCTCGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: TDGLTSVCVALG*WSLSARNARSA
Trigger: GGCGGAGCGAGCATTCCGAGCAGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583083.1
CDS CAA 90 bp CCAGGGGGAGCCAGTCAACCACAACTACATTGGCGTCTTTCTCTCTaGTGTGCAGGGCTGACACGAGTTTGTGCAGCCAGTTTTCAAAGA +
Preference number: 6 (lower is better)
Translates to: PGGASQPQLHWRLSL*CAGLTRVCAASFQR
Trigger: TCTTTGAAAACTGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGACTGGCTCCCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS CAA 90 bp TGCTCTGGGTCCTTGGAGGTGCGGAGGTTAAACCTCACAGATGGTTaGACCTCAGTCTGTGTAGCTTTGGGTTTGTGGAGCTTATCGCGT +
Preference number: 6 (lower is better)
Translates to: CSGSLEVRRLNLTDG*TSVCVALGLWSLSR
Trigger: ACGCGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGTGAGGTTTAACCTCCGCACCTCCAAGGACCCAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577628.5
CDS CAA 90 bp CGGAGGTTAAACCTCACAGATGGTTTGACCTCAGTCTGTGTAGCTTaGGGTTTGTGGAGCTTATCTGCTCGGAATGCTCGCTCCGCCACT +
Preference number: 6 (lower is better)
Translates to: RRLNLTDGLTSVCVA*GLWSLSARNARSAT
Trigger: AGTGGCGGAGCGAGCATTCCGAGCAGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGTGAGGTTTAACCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583083.1
CDS CAA 90 bp TGCTCTGGGTCCTTGGAGGTGCGGAGGTTAAACCTCACAGATGGTTaGACCTCAGTCTGTGTAGCTTTGGGTTTGTGGAGCTTATCTTCC +
Preference number: 6 (lower is better)
Translates to: CSGSLEVRRLNLTDG*TSVCVALGLWSLSS
Trigger: GGAAGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGTGAGGTTTAACCTCCGCACCTCCAAGGACCCAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000579750.1
ENST00000580036.5
CDS CAA 90 bp TTAAACCTCACAGATGGTTTGACCTCAGTCTGTGTAGCTTTGGGTTaGTGGAGCTTATCTGCTCGGAATGCTCGCTCCGCCACTAGCTGC +
Preference number: 6 (lower is better)
Translates to: LNLTDGLTSVCVALG*WSLSARNARSATSC
Trigger: GCAGCTAGTGGCGGAGCGAGCATTCCGAGCAGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGTGAGGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583083.1
CDS CAA 90 bp TGCTCTGGGTCCTTGGAGGTGCGGAGGTTAAACCTCACAGATGGTTaGACCTCAGTCTGTGTAGCTTTGGGTTTGTGGAGCTTATCTGCT +
Preference number: 6 (lower is better)
Translates to: CSGSLEVRRLNLTDG*TSVCVALGLWSLSA
Trigger: AGCAGATAAGCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGTGAGGTTTAACCTCCGCACCTCCAAGGACCCAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583083.1
CDS TCA 72 bp CAGGGAAGCTCCACAGTGGGACTGAAAGAAACCGTGTaGGAGTGGCATTTGTTAGCTCACACACCAGCAAAC +
Preference number: 6 (lower is better)
Translates to: QGSSTVGLKETV*EWHLLAHTPAN
Trigger: GTTTGCTGGTGTGTGAGCTAACAAATGCCACTCTCACACGGTTTCTTTCAGTCCCACTGTGGAGCTTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS GCA 72 bp CCGCTCCACTATTTCCAGTGGCAGAGTCTGGGAATCTaGATTAGTGCCATAAAGGGTGACGTAAAAGGTGGG +
Preference number: 6 (lower is better)
Translates to: PLHYFQWQSLGI*ISAIKGDVKGG
Trigger: CCCACCTTTTACGTCACCCTTTATGGCACTAATGCAGATTCCCAGACTCTGCCACTGGAAATAGTGGAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CCA 72 bp TGGGTCCTTGGAGGTGCGGAGGTTAAACCTCACAGATaGTTTGACCTCAGTCTGTGTAGCTTTGGGTTTGTG +
Preference number: 6 (lower is better)
Translates to: WVLGGAEVKPHR*FDLSLCSFGFV
Trigger: CACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGTGAGGTTTAACCTCCGCACCTCCAAGGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
ENST00000583083.1
CDS CCA 72 bp ACTTGCGAAACCAGAGCTCCCGGCCTGGGGATATGCTaGTGTTCTCAGGGTCTTCTGTACAAAATGTCAGTT +
Preference number: 6 (lower is better)
Translates to: TCETRAPGLGIC*CSQGLLYKMSV
Trigger: AACTGACATTTTGTACAGAAGACCCTGAGAACACCAGCATATCCCCAGGCCGGGAGCTCTGGTTTCGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261292.9
ENST00000427224.6
CDS CAA 72 bp TCCTTGGAGGTGCGGAGGTTAAACCTCACAGATGGTTaGACCTCAGTCTGTGTAGCTTTGGGTTTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: SLEVRRLNLTDG*TSVCVALGLWS
Trigger: GCTCCACAAACCCAAAGCTACACAGACTGAGGTCAAACCATCTGTGAGGTTTAACCTCCGCACCTCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
ENST00000583083.1
CDS CAA 72 bp GCGTCTTTCTCTCTTGTGTGCAGGGCTGACACGAGTTaGTGCAGCCAGTTTTCAAAGATACCGCTCATCGTC +
Preference number: 6 (lower is better)
Translates to: ASFSLVCRADTS*CSQFSKIPLIV
Trigger: GACGATGAGCGGTATCTTTGAAAACTGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS TCA 72 bp CATTTCTTAAGAAGATTGGGTTTGAGATCCTGCTGGTaGCAGGAGACTCCCTCTCATCCCCCAGTACCTGCA +
Preference number: 6 (lower is better)
Translates to: HFLRRLGLRSCW*QETPSHPPVPA
Trigger: TGCAGGTACTGGGGGATGAGAGGGAGTCTCCTGTCACCAGCAGGATCTCAAACCCAATCTTCTTAAGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579750.1
CDS TCA 72 bp CCACTGAACCTCTCTGAATCTCAGGCTCCTTATCAGTaGACATGTGAACAGCATCCATGTCAGGAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: PLNLSESQAPYQ*TCEQHPCQEGG
Trigger: TCCTCCCTCCTGACATGGATGCTGTTCACATGTTCACTGATAAGGAGCCTGAGATTCAGAGAGGTTCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS GCA 72 bp ACACACCAGCAAACGCGCAAACCTGTATTCAGGGTGTaGTCTTTTGACCTTAAGGCCAAGCTTTCTGACACC +
Preference number: 6 (lower is better)
Translates to: THQQTRKPVFRV*SFDLKAKLSDT
Trigger: GGTGTCAGAAAGCTTGGCCTTAAGGTCAAAAGAGCACACCCTGAATACAGGTTTGCGCGTTTGCTGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS CAA 72 bp AGCAAACGCGCAAACCTGTATTCAGGGTGTGCTCTTTaGACCTTAAGGCCAAGCTTTCTGACACCCCTATGG +
Preference number: 6 (lower is better)
Translates to: SKRANLYSGCAL*TLRPSFLTPLW
Trigger: CCATAGGGGTGTCAGAAAGCTTGGCCTTAAGGTCAAAAGAGCACACCCTGAATACAGGTTTGCGCGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS GCA 72 bp TCTTTCTCTCTTGTGTGCAGGGCTGACACGAGTTTGTaGAGCCAGTTTTCAAAGATACCGCTCATCGTCCAT +
Preference number: 6 (lower is better)
Translates to: SFSLVCRADTSL*SQFSKIPLIVH
Trigger: ATGGACGATGAGCGGTATCTTTGAAAACTGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS GCA 72 bp TCAACCACAACTACATTGGCGTCTTTCTCTCTTGTGTaGAGGGCTGACACGAGTTTGTGCAGCCAGTTTTCA +
Preference number: 6 (lower is better)
Translates to: STTTTLASFSLV*RADTSLCSQFS
Trigger: TGAAAACTGGCTGCACAAACTCGTGTCAGCCCTGCACACAAGAGAGAAAGACGCCAATGTAGTTGTGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261292.9
ENST00000427224.6
ENST00000577628.5
ENST00000579750.1
ENST00000580036.5
CDS GCA 72 bp ACCAGAGAGTCAACAAAGAGGTGGACGGCTCGCTCATaGTCACATTTTACCACCTCTGTGATTGCTGTGATT +
Preference number: 6 (lower is better)
Translates to: TRESTKRWTARS*SHFTTSVIAVI
Trigger: AATCACAGCAATCACAGAGGTGGTAAAATGTGAGCATGAGCGAGCCGTCCACCTCTTTGTTGACTCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427224.6
CDS CAA 90 bp TCACACACCAGCAAACGCGCAAACCTGTATTCAGGGTGTGCTCTTTaGACCTTAAGGCCAAGCTTTCTGACACCCCTATGGGACTATTTT +
Preference number: 6 (lower is better)
Translates to: SHTSKRANLYSGCAL*TLRPSFLTPLWDYF
Trigger: AAAATAGTCCCATAGGGGTGTCAGAAAGCTTGGCCTTAAGGTCAAAAGAGCACACCCTGAATACAGGTTTGCGCGTTTGCTGGTGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS GCA 72 bp ACCAGAGAGTCAACAAAGAGGTGGACGGCTCGCTCATaGTCACATTTTACCACCTCTGTGATTGTTCCATAT +
Preference number: 6 (lower is better)
Translates to: TRESTKRWTARS*SHFTTSVIVPY
Trigger: ATATGGAACAATCACAGAGGTGGTAAAATGTGAGCATGAGCGAGCCGTCCACCTCTTTGTTGACTCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS TCA 72 bp ACATTTTACCACCTCTGTGATTGTTCCATATGCAATTaGTCCCAAGACATCGTTGAGTCCACAGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: TFYHLCDCSICN*SQDIVESTAWL
Trigger: CAGCCAGGCTGTGGACTCAACGATGTCTTGGGATCAATTGCATATGGAACAATCACAGAGGTGGTAAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261292.9
ENST00000577628.5
ENST00000580036.5
CDS TCA 72 bp TTTGAGAAACACCACACTGCAGCACCCTCTGGACCCTaGGTTGAGTACATCACAGTTCTTGCATTTACATAT +
Preference number: 6 (lower is better)
Translates to: FEKHHTAAPSGP*VEYITVLAFTY
Trigger: ATATGTAAATGCAAGAACTGTGATGTACTCAACTCAGGGTCCAGAGGGTGCTGCAGTGTGGTGTTTCTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS TCA 72 bp AGTGTGGGGAGAACTATCAAAGTGTCCTCTTTGCCTTaGTCTAGAAATACAAGAGAGACACTGTATTGGCAG +
Preference number: 6 (lower is better)
Translates to: SVGRTIKVSSLP*SRNTRETLYWQ
Trigger: CTGCCAATACAGTGTCTCTCTTGTATTTCTAGATCAAGGCAAAGAGGACACTTTGATAGTTCTCCCCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS CCA 72 bp CATCTTTCCTGGGTGTGTCCAATCTACATGGTTGTCTaGAGGATCAATGAAGTTAATATATGTGGAAACACT +
Preference number: 6 (lower is better)
Translates to: HLSWVCPIYMVV*RINEVNICGNT
Trigger: AGTGTTTCCACATATATTAACTTCATTGATCCTCCAGACAACCATGTAGATTGGACACACCCAGGAAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS CCA 72 bp TCCTTAGTCATCTTTCCTGGGTGTGTCCAATCTACATaGTTGTCTGGAGGATCAATGAAGTTAATATATGTG +
Preference number: 6 (lower is better)
Translates to: SLVIFPGCVQST*LSGGSMKLIYV
Trigger: CACATATATTAACTTCATTGATCCTCCAGACAACCATGTAGATTGGACACACCCAGGAAAGATGACTAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1
CDS CAA 72 bp TTAGTCATCTTTCCTGGGTGTGTCCAATCTACATGGTaGTCTGGAGGATCAATGAAGTTAATATATGTGGAA +
Preference number: 6 (lower is better)
Translates to: LVIFPGCVQSTW*SGGSMKLIYVE
Trigger: TTCCACATATATTAACTTCATTGATCCTCCAGACAACCATGTAGATTGGACACACCCAGGAAAGATGACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623277.1