Pregenerated sensors for LIPF (Homo sapiens)
Ensembl gene IDs: ENSG00000182333Ensembl transcript IDs: ENST00000238983.9, ENST00000355843.2, ENST00000394375.7, ENST00000496797.1, ENST00000608620.5, ENST00000609378.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCAACAGGTCCTTGCCACCGTTCCACACTGCAATTGGTACATTCATaGCTGTCACATTGTAGTAGGGAGGTTGGGACTGATCATAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: PTGPCHRSTLQLVHS*LSHCSREVGTDHSA Trigger: TGCACTATGATCAGTCCCAACCTCCCTACTACAATGTGACAGCCATGAATGTACCAATTGCAGTGTGGAACGGTGGCAAGGACCTGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000238983.9 ENST00000355843.2 ENST00000394375.7 ENST00000608620.5 |
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| CDS CCA 90 bp | GTAGTAGGGAGGTTGGGACTGATCATAGTGCATCCTATTCTGAACTaGGCTTCCCCAGTCATAAGCTTGGAATTTCCCAGACTTAACAGC | + |
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Preference number: 5 (lower is better) Translates to: VVGRLGLIIVHPILN*ASPVISLEFPRLNS Trigger: GCTGTTAAGTCTGGGAAATTCCAAGCTTATGACTGGGGAAGCCCAGTTCAGAATAGGATGCACTATGATCAGTCCCAACCTCCCTACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000238983.9 ENST00000355843.2 ENST00000394375.7 ENST00000496797.1 ENST00000608620.5 |
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| CDS CCA 90 bp | CACCTCAGTCTTCACTCATGTCATTTTCCCTTTTCCCGCTACACCTaGGACACACAGGTTTCCTTTCAGCTCCTAGAACTCTTGAAACAC | + |
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Preference number: 5 (lower is better) Translates to: HLSLHSCHFPFSRYT*DTQVSFQLLELLKH Trigger: GTGTTTCAAGAGTTCTAGGAGCTGAAAGGAAACCTGTGTGTCCCAGGTGTAGCGGGAAAAGGGAAAATGACATGAGTGAAGACTGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609378.1 |
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| CDS CCA 90 bp | CCTCCTATTGATGATGATTCAGATTGCTGTTCTCCTACCCCTAAATaGGTTTTTACTTCTCTCTTGAATCCATATGGACATTCCTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: PPIDDDSDCCSPTPK*VFTSLLNPYGHSFG Trigger: TCCAAAGGAATGTCCATATGGATTCAAGAGAGAAGTAAAAACCCATTTAGGGGTAGGAGAACAGCAATCTGAATCATCATCAATAGGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609378.1 |
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| CDS GCA 90 bp | TATCATAGAAACAATGTCATTGTAAACTTCTTGAGGGGCATCCATTaGCCAGATAAAGTCCAAGTGATTGTAAAAAGGAATCTCCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: YHRNNVIVNFLRGIH*PDKVQVIVKRNLLV Trigger: CACAAGGAGATTCCTTTTTACAATCACTTGGACTTTATCTGGGCAATGGATGCCCCTCAAGAAGTTTACAATGACATTGTTTCTATGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000238983.9 ENST00000355843.2 ENST00000394375.7 ENST00000608620.5 |
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| CDS GCA 72 bp | CAGAATGAGGCCCAAGGCTCTCACTATCACCACTACTaGCCCATCTGCACCTCAGTCTTCACTCATGTCATT | + |
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Preference number: 6 (lower is better) Translates to: QNEAQGSHYHHY*PICTSVFTHVI Trigger: AATGACATGAGTGAAGACTGAGGTGCAGATGGGGCAGTAGTGGTGATAGTGAGAGCCTTGGGCCTCATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609378.1 |
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| CDS CCA 72 bp | AGCCAACAGGTCCTTGCCACCGTTCCACACTGCAATTaGTACATTCATGGCTGTCACATTGTAGTAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SQQVLATVPHCN*YIHGCHIVVGR Trigger: CCTCCCTACTACAATGTGACAGCCATGAATGTACCAATTGCAGTGTGGAACGGTGGCAAGGACCTGTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000238983.9 ENST00000355843.2 ENST00000394375.7 ENST00000608620.5 |
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| CDS CCA 72 bp | CCTTGCCACCGTTCCACACTGCAATTGGTACATTCATaGCTGTCACATTGTAGTAGGGAGGTTGGGACTGAT | + |
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Preference number: 6 (lower is better) Translates to: PCHRSTLQLVHS*LSHCSREVGTD Trigger: ATCAGTCCCAACCTCCCTACTACAATGTGACAGCCATGAATGTACCAATTGCAGTGTGGAACGGTGGCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000238983.9 ENST00000355843.2 ENST00000394375.7 ENST00000496797.1 ENST00000608620.5 |
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| CDS CAA 72 bp | CATCCTATTCTGAACTGGGCTTCCCCAGTCATAAGCTaGGAATTTCCCAGACTTAACAGCCTGGGTCCAATG | + |
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Preference number: 6 (lower is better) Translates to: HPILNWASPVIS*EFPRLNSLGPM Trigger: CATTGGACCCAGGCTGTTAAGTCTGGGAAATTCCAAGCTTATGACTGGGGAAGCCCAGTTCAGAATAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000238983.9 ENST00000355843.2 ENST00000394375.7 ENST00000496797.1 ENST00000608620.5 |
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| CDS CAA 90 bp | CGCTACACCTGGGACACACAGGTTTCCTTTCAGCTCCTAGAACTCTaGAAACACTTTCATGCCTTAGCATCAGCAGCCAGGTTTTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RYTWDTQVSFQLLEL*KHFHALASAARFCS Trigger: AGAACAAAACCTGGCTGCTGATGCTAAGGCATGAAAGTGTTTCAAGAGTTCTAGGAGCTGAAAGGAAACCTGTGTGTCCCAGGTGTAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609378.1 |
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| CDS CCA 72 bp | AGGTTGGGACTGATCATAGTGCATCCTATTCTGAACTaGGCTTCCCCAGTCATAAGCTTGGAATTTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RLGLIIVHPILN*ASPVISLEFPR Trigger: TCTGGGAAATTCCAAGCTTATGACTGGGGAAGCCCAGTTCAGAATAGGATGCACTATGATCAGTCCCAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000238983.9 ENST00000355843.2 ENST00000394375.7 ENST00000496797.1 ENST00000608620.5 |
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| CDS CAA 90 bp | ATCATAGTGCATCCTATTCTGAACTGGGCTTCCCCAGTCATAAGCTaGGAATTTCCCAGACTTAACAGCCTGGGTCCAATGGAACATGTT | + |
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Preference number: 6 (lower is better) Translates to: IIVHPILNWASPVIS*EFPRLNSLGPMEHV Trigger: AACATGTTCCATTGGACCCAGGCTGTTAAGTCTGGGAAATTCCAAGCTTATGACTGGGGAAGCCCAGTTCAGAATAGGATGCACTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000238983.9 ENST00000355843.2 ENST00000394375.7 ENST00000496797.1 ENST00000608620.5 |
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| CDS GCA 72 bp | CTGTATTATGCCACTCCTCTTTTTAAAACTTCTCAGTaGACTCAGAATGAGGCCCAAGGCTCTCACTATCAC | + |
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Preference number: 6 (lower is better) Translates to: LYYATPLFKTSQ*TQNEAQGSHYH Trigger: GTGATAGTGAGAGCCTTGGGCCTCATTCTGAGTGCACTGAGAAGTTTTAAAAAGAGGAGTGGCATAATACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609378.1 |
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| CDS GCA 72 bp | AACAATGTCATTGTAAACTTCTTGAGGGGCATCCATTaGCCAGATAAAGTCCAAGTGATTGTAAAAAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: NNVIVNFLRGIH*PDKVQVIVKRN Trigger: ATTCCTTTTTACAATCACTTGGACTTTATCTGGGCAATGGATGCCCCTCAAGAAGTTTACAATGACATTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000238983.9 ENST00000355843.2 ENST00000394375.7 ENST00000608620.5 |
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