Pregenerated sensors for LINP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000223784Ensembl transcript IDs: ENST00000417112.2, ENST00000649087.1, ENST00000649511.1, ENST00000650334.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTGGTGGGCACAGGGCTGTGGTCAGCACCCGATGCAGAGGCCTCTaGCTGCAGAATCCCTTCCCAGGCACAGGGCCACCACACAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: AGGHRAVVSTRCRGL*LQNPFPGTGPPHKG Trigger: GCCCTTGTGTGGTGGCCCTGTGCCTGGGAAGGGATTCTGCAGGCAGAGGCCTCTGCATCGGGTGCTGACCACAGCCCTGTGCCCACCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649087.1 |
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| CDS TCA 90 bp | GGCTCTGCAGTCGGCGCTGGGAGGCTCACAGAGGAGCTACCCAAATaGATGAAAGCACAGCACCATCCTGGAAAGCACAGCGCCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GSAVGAGRLTEELPK*MKAQHHPGKHSAVL Trigger: CAGGACGGCGCTGTGCTTTCCAGGATGGTGCTGTGCTTTCATTCATTTGGGTAGCTCCTCTGTGAGCCTCCCAGCGCCGACTGCAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CCA 90 bp | CTTTCTTTGTGTGGCTTGAATTTCGGGGTCTTGCAGGCTGGAGAGTaGGGGCTCTGCAGTCGGCGCTGGGAGGCTCACAGAGGAGCTACC | + |
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Preference number: 5 (lower is better) Translates to: LSLCGLNFGVLQAGE*GLCSRRWEAHRGAT Trigger: GGTAGCTCCTCTGTGAGCCTCCCAGCGCCGACTGCAGAGCCCCCACTCTCCAGCCTGCAAGACCCCGAAATTCAAGCCACACAAAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS TCA 90 bp | AGGTGCAGCCACCGTCCCCTCCTGGGCACCCTCCATGCAGCTGTGTaGACCAACTCTATCGGCAACAAGAATGCATCTTGGACCCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RCSHRPLLGTLHAAV*TNSIGNKNASWTPA Trigger: TGCAGGGGTCCAAGATGCATTCTTGTTGCCGATAGAGTTGGTTCACACAGCTGCATGGAGGGTGCCCAGGAGGGGACGGTGGCTGCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS GCA 90 bp | TGTGGCTTGAATTTCGGGGTCTTGCAGGCTGGAGAGTGGGGGCTCTaGAGTCGGCGCTGGGAGGCTCACAGAGGAGCTACCCAAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: CGLNFGVLQAGEWGL*SRRWEAHRGATQMN Trigger: ATTCATTTGGGTAGCTCCTCTGTGAGCCTCCCAGCGCCGACTGCAGAGCCCCCACTCTCCAGCCTGCAAGACCCCGAAATTCAAGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CCA 90 bp | ATGTTCCACACTGCATTCCTAAGGCTCAGTGCCATTGAAGGGAGCTaGATTGAGGTGCAGCCACCGTCCCCTCCTGGGCACCCTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: MFHTAFLRLSAIEGS*IEVQPPSPPGHPPC Trigger: GCATGGAGGGTGCCCAGGAGGGGACGGTGGCTGCACCTCAATCCAGCTCCCTTCAATGGCACTGAGCCTTAGGAATGCAGTGTGGAACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS TCA 90 bp | CTGCAGTCGGCGCTGGGAGGCTCACAGAGGAGCTACCCAAATGAATaGAAGCACAGCACCATCCTGGAAAGCACAGCGCCGTCCTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LQSALGGSQRSYPNE*KHSTILESTAPSWK Trigger: TTTCCAGGACGGCGCTGTGCTTTCCAGGATGGTGCTGTGCTTTCATTCATTTGGGTAGCTCCTCTGTGAGCCTCCCAGCGCCGACTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CCA 90 bp | GCTGCAGTGGAGTCTGAAGTCCCGCAGTTGGTCTGTCTTATTCCCTaGGGTTCCTATCCCAGCCCTTACAGAGTGCCCTGGTCCCCATAC | + |
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Preference number: 5 (lower is better) Translates to: AAVESEVPQLVCLIP*GSYPSPYRVPWSPY Trigger: GTATGGGGACCAGGGCACTCTGTAAGGGCTGGGATAGGAACCCCAGGGAATAAGACAGACCAACTGCGGGACTTCAGACTCCACTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS GCA 90 bp | AGCTGGATTGAGGTGCAGCCACCGTCCCCTCCTGGGCACCCTCCATaGAGCTGTGTGAACCAACTCTATCGGCAACAAGAATGCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: SWIEVQPPSPPGHPP*SCVNQLYRQQECIL Trigger: CAAGATGCATTCTTGTTGCCGATAGAGTTGGTTCACACAGCTGCATGGAGGGTGCCCAGGAGGGGACGGTGGCTGCACCTCAATCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS CCA 90 bp | ACAACAACCCGATCCCGGCTGCAGTGGAGTCTGAAGTCCCGCAGTTaGTCTGTCTTATTCCCTGGGGTTCCTATCCCAGCCCTTACAGAG | + |
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Preference number: 5 (lower is better) Translates to: TTTRSRLQWSLKSRS*SVLFPGVPIPALTE Trigger: CTCTGTAAGGGCTGGGATAGGAACCCCAGGGAATAAGACAGACCAACTGCGGGACTTCAGACTCCACTGCAGCCGGGATCGGGTTGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS TCA 90 bp | AAGCTCCCAAGGCCAGCGAACCTCTCTCCAGCACCAACGGGGCTGTaGCCAATACTGCCTCATGCCCAGTCCCTGATCTTATTTGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: KLPRPANLSPAPTGL*PILPHAQSLILFVV Trigger: TACCACAAATAAGATCAGGGACTGGGCATGAGGCAGTATTGGTCACAGCCCCGTTGGTGCTGGAGAGAGGTTCGCTGGCCTTGGGAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649511.1 |
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| CDS GCA 90 bp | AAGGAGACGGAGGGAGGAAATTCACTTCCCCCACAGGGGAGGAACTaGAAAGTCACTGGGCAAAGGGTGTGGGCAGGTAGGGTGAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: KETEGGNSLPPQGRN*KVTGQRVWAGRVKN Trigger: ATTCTTCACCCTACCTGCCCACACCCTTTGCCCAGTGACTTTGCAGTTCCTCCCCTGTGGGGGAAGTGAATTTCCTCCCTCCGTCTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS TCA 90 bp | CCTCTTCCGCCTCGCCTTCACAGACGGAGCTTGATAATACCTGCCTaGAGGGTGTTTGCTGTGAACTGGTCCCTTGAAGAATCTGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: PLPPRLHRRSLIIPA*RVFAVNWSLEESAL Trigger: CAAAGCAGATTCTTCAAGGGACCAGTTCACAGCAAACACCCTTCAGGCAGGTATTATCAAGCTCCGTCTGTGAAGGCGAGGCGGAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417112.2 |
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| CDS GCA 90 bp | GAACCTCTCTCCAGCACCAACGGGGCTGTGACCAATACTGCCTCATaGCCAGTCCCTGATCTTATTTGTGGTAAAGCAGCCCACACTTTT | + |
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Preference number: 5 (lower is better) Translates to: EPLSSTNGAVTNTAS*PVPDLICGKAAHTF Trigger: AAAAGTGTGGGCTGCTTTACCACAAATAAGATCAGGGACTGGGCATGAGGCAGTATTGGTCACAGCCCCGTTGGTGCTGGAGAGAGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649511.1 |
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| CDS CCA 90 bp | GCTCACAGAGGAGCTACCCAAATGAATGAAAGCACAGCACCATCCTaGAAAGCACAGCGCCGTCCTGGAAAGCACCGTCTGTTGTTCATT | + |
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Preference number: 5 (lower is better) Translates to: AHRGATQMNESTAPS*KAQRRPGKHRLLFI Trigger: AATGAACAACAGACGGTGCTTTCCAGGACGGCGCTGTGCTTTCCAGGATGGTGCTGTGCTTTCATTCATTTGGGTAGCTCCTCTGTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CCA 90 bp | TACCATTCACTGATCCAGCTCTATCTTCTTCATAAGCGAGAGCAATaGCTCCTCCTGGCCCAGACCCCACAGCTCATGTGTGGGATGGAA | + |
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Preference number: 5 (lower is better) Translates to: YHSLIQLYLLHKREQ*LLLAQTPQLMCGME Trigger: TTCCATCCCACACATGAGCTGTGGGGTCTGGGCCAGGAGGAGCCATTGCTCTCGCTTATGAAGAAGATAGAGCTGGATCAGTGAATGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649087.1 ENST00000650334.1 |
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| CDS TCA 90 bp | ACAAGTATGCCCGTGCTGCTTTCAGCACGTTTAACCTGTAAAATCTaGAAACTACGGAACCAGCTGGTGGGCACAGGGCTGTGGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TSMPVLLSARLTCKI*KLRNQLVGTGLWSA Trigger: TGCTGACCACAGCCCTGTGCCCACCAGCTGGTTCCGTAGTTTTCAGATTTTACAGGTTAAACGTGCTGAAAGCAGCACGGGCATACTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649087.1 |
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| CDS GCA 90 bp | AAGCACAGCGCCGTCCTGGAAAGCACCGTCTGTTGTTCATTCAATTaGATCCGGGCTACTTCCACACCGGCACGTAGAGGACATTATTTA | + |
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Preference number: 5 (lower is better) Translates to: KHSAVLESTVCCSFN*IRATSTPARRGHYL Trigger: TAAATAATGTCCTCTACGTGCCGGTGTGGAAGTAGCCCGGATGCAATTGAATGAACAACAGACGGTGCTTTCCAGGACGGCGCTGTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CCA 90 bp | GGCAGGAAGTTAAGTAAACATTGGAGACCAAAGGCCCAGAGGCCATaGCAAGGCCCAGTCGGAACAAATAAGTCACAGAGCATTCGTCTG | + |
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Preference number: 5 (lower is better) Translates to: GRKLSKHWRPKAQRP*QGPVGTNKSQSIRL Trigger: CAGACGAATGCTCTGTGACTTATTTGTTCCGACTGGGCCTTGCCATGGCCTCTGGGCCTTTGGTCTCCAATGTTTACTTAACTTCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS CCA 90 bp | ACACACAGCCCAGATCATTCTCTCAGGCTGGGCATGTTCAGCATGTaGAAGCTAATTCAGCTGAACAAGTATGCCCGTGCTGCTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: THSPDHSLRLGMFSM*KLIQLNKYARAAFS Trigger: GCTGAAAGCAGCACGGGCATACTTGTTCAGCTGAATTAGCTTCCACATGCTGAACATGCCCAGCCTGAGAGAATGATCTGGGCTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649087.1 |
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| CDS TCA 90 bp | CTTGCAGGACTGCAGGAGATTATTTATGCAGCTGAATCAAGATGCTaGCTTCAGCACCGTAAAACCCGGCTAGCAGGGAGTCCAAGCCTA | + |
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Preference number: 5 (lower is better) Translates to: LAGLQEIIYAAESRC*LQHRKTRLAGSPSL Trigger: TAGGCTTGGACTCCCTGCTAGCCGGGTTTTACGGTGCTGAAGTCAGCATCTTGATTCAGCTGCATAAATAATCTCCTGCAGTCCTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS TCA 90 bp | GCTCACATTCCAGTAAGAATAAACACTCACATTGCTGTGCACACGTaGCCATGCACACACACACAGCCCAGATCATTCTCTCAGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: AHIPVRINTHIAVHT*PCTHTQPRSFSQAG Trigger: CCCAGCCTGAGAGAATGATCTGGGCTGTGTGTGTGTGCATGGTCACGTGTGCACAGCAATGTGAGTGTTTATTCTTACTGGAATGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649087.1 |
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| CDS TCA 90 bp | GAAAATGATAGATCTGAGCAACAGAACCTGAACTGGAGCGGGGTCTaGGGTGTGTGCCTCTGGTACCATTCACTGATCCAGCTCTATCTT | + |
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Preference number: 5 (lower is better) Translates to: ENDRSEQQNLNWSGV*GVCLWYHSLIQLYL Trigger: AAGATAGAGCTGGATCAGTGAATGGTACCAGAGGCACACACCTCAGACCCCGCTCCAGTTCAGGTTCTGTTGCTCAGATCTATCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000649087.1 ENST00000650334.1 |
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| CDS TCA 90 bp | CATGGCAAGGCCCAGTCGGAACAAATAAGTCACAGAGCATTCGTCTaGATTAATTCCAGAGACAACATGTCTCCACCTGCAGAAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: HGKAQSEQISHRAFV*INSRDNMSPPAETS Trigger: AGAAGTTTCTGCAGGTGGAGACATGTTGTCTCTGGAATTAATTCAGACGAATGCTCTGTGACTTATTTGTTCCGACTGGGCCTTGCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS TCA 90 bp | TGGTCCCTTGAAGAATCTGCTTTGCTCATGATCCTATGCAACCCTTaGGGTCATGGATTGTATCTTGTCAATCTCTACTTCCCAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: WSLEESALLMILCNP*GHGLYLVNLYFPAM Trigger: CATTGCTGGGAAGTAGAGATTGACAAGATACAATCCATGACCTCAAGGGTTGCATAGGATCATGAGCAAAGCAGATTCTTCAAGGGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417112.2 |
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| CDS TCA 90 bp | ACCAACTCTATCGGCAACAAGAATGCATCTTGGACCCCTGCATGCTaGCCTGTTACTTTATGTAGTTATAACTGTGACTTTCTTTATGCA | + |
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Preference number: 5 (lower is better) Translates to: TNSIGNKNASWTPAC*PVTLCSYNCDFLYA Trigger: TGCATAAAGAAAGTCACAGTTATAACTACATAAAGTAACAGGTCAGCATGCAGGGGTCCAAGATGCATTCTTGTTGCCGATAGAGTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS TCA 90 bp | CTTGAGGTCATGGATTGTATCTTGTCAATCTCTACTTCCCAGCAATaGGCACCATATTTACTGCATGGTAATTGCCAAGTATTTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LEVMDCILSISTSQQ*APYLLHGNCQVFVE Trigger: TTCAACAAATACTTGGCAATTACCATGCAGTAAATATGGTGCTCATTGCTGGGAAGTAGAGATTGACAAGATACAATCCATGACCTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417112.2 |
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| CDS CCA 72 bp | TGTGGCTTGAATTTCGGGGTCTTGCAGGCTGGAGAGTaGGGGCTCTGCAGTCGGCGCTGGGAGGCTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: CGLNFGVLQAGE*GLCSRRWEAHR Trigger: TCTGTGAGCCTCCCAGCGCCGACTGCAGAGCCCCCACTCTCCAGCCTGCAAGACCCCGAAATTCAAGCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CCA 72 bp | TTCTTTGTGTGGCTTGAATTTCGGGGTCTTGCAGGCTaGAGAGTGGGGGCTCTGCAGTCGGCGCTGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: FFVWLEFRGLAG*RVGALQSALGG Trigger: GCCTCCCAGCGCCGACTGCAGAGCCCCCACTCTCCAGCCTGCAAGACCCCGAAATTCAAGCCACACAAAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS GCA 72 bp | GAGGTGCAGCCACCGTCCCCTCCTGGGCACCCTCCATaGAGCTGTGTGAACCAACTCTATCGGCAACAAGAA | + |
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Preference number: 6 (lower is better) Translates to: EVQPPSPPGHPP*SCVNQLYRQQE Trigger: TTCTTGTTGCCGATAGAGTTGGTTCACACAGCTGCATGGAGGGTGCCCAGGAGGGGACGGTGGCTGCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS CCA 72 bp | CGATCCCGGCTGCAGTGGAGTCTGAAGTCCCGCAGTTaGTCTGTCTTATTCCCTGGGGTTCCTATCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RSRLQWSLKSRS*SVLFPGVPIPA Trigger: GGCTGGGATAGGAACCCCAGGGAATAAGACAGACCAACTGCGGGACTTCAGACTCCACTGCAGCCGGGATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CAA 72 bp | CCGATCCCGGCTGCAGTGGAGTCTGAAGTCCCGCAGTaGGTCTGTCTTATTCCCTGGGGTTCCTATCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PIPAAVESEVPQ*VCLIPWGSYPS Trigger: GCTGGGATAGGAACCCCAGGGAATAAGACAGACCAACTGCGGGACTTCAGACTCCACTGCAGCCGGGATCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS TCA 72 bp | AGGCCAGCGAACCTCTCTCCAGCACCAACGGGGCTGTaGCCAATACTGCCTCATGCCCAGTCCCTGATCTTA | + |
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Preference number: 6 (lower is better) Translates to: RPANLSPAPTGL*PILPHAQSLIL Trigger: TAAGATCAGGGACTGGGCATGAGGCAGTATTGGTCACAGCCCCGTTGGTGCTGGAGAGAGGTTCGCTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649511.1 |
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| CDS GCA 72 bp | GAGGGAGGAAATTCACTTCCCCCACAGGGGAGGAACTaGAAAGTCACTGGGCAAAGGGTGTGGGCAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: EGGNSLPPQGRN*KVTGQRVWAGR Trigger: CCTACCTGCCCACACCCTTTGCCCAGTGACTTTGCAGTTCCTCCCCTGTGGGGGAAGTGAATTTCCTCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS CAA 72 bp | AATGCCAACGGCCCCCTCCTCCTTTCTTTGTGTGGCTaGAATTTCGGGGTCTTGCAGGCTGGAGAGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: NANGPLLLSLCG*NFGVLQAGEWG Trigger: CCCCCACTCTCCAGCCTGCAAGACCCCGAAATTCAAGCCACACAAAGAAAGGAGGAGGGGGCCGTTGGCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS TCA 72 bp | GTCGGCGCTGGGAGGCTCACAGAGGAGCTACCCAAATaGATGAAAGCACAGCACCATCCTGGAAAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: VGAGRLTEELPK*MKAQHHPGKHS Trigger: GCTGTGCTTTCCAGGATGGTGCTGTGCTTTCATTCATTTGGGTAGCTCCTCTGTGAGCCTCCCAGCGCCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CCA 72 bp | GAGTCTGAAGTCCCGCAGTTGGTCTGTCTTATTCCCTaGGGTTCCTATCCCAGCCCTTACAGAGTGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ESEVPQLVCLIP*GSYPSPYRVPW Trigger: CCAGGGCACTCTGTAAGGGCTGGGATAGGAACCCCAGGGAATAAGACAGACCAACTGCGGGACTTCAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CAA 90 bp | AACAACAACCCGATCCCGGCTGCAGTGGAGTCTGAAGTCCCGCAGTaGGTCTGTCTTATTCCCTGGGGTTCCTATCCCAGCCCTTACAGA | + |
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Preference number: 6 (lower is better) Translates to: NNNPIPAAVESEVPQ*VCLIPWGSYPSPYR Trigger: TCTGTAAGGGCTGGGATAGGAACCCCAGGGAATAAGACAGACCAACTGCGGGACTTCAGACTCCACTGCAGCCGGGATCGGGTTGTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CAA 90 bp | AAGCAGCCCACACTTTTTAGTGCAAGGATTTCTGCCCCTCCCTGTTaGATAGCGATCAGAGACGCCTCACCGTGGGCCATCCATGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: KQPTLFSARISAPPC*IAIRDASPWAIHAG Trigger: ACCCGCATGGATGGCCCACGGTGAGGCGTCTCTGATCGCTATCAAACAGGGAGGGGCAGAAATCCTTGCACTAAAAAGTGTGGGCTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649511.1 |
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| CDS GCA 72 bp | GCCGTCCTGGAAAGCACCGTCTGTTGTTCATTCAATTaGATCCGGGCTACTTCCACACCGGCACGTAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: AVLESTVCCSFN*IRATSTPARRG Trigger: TCCTCTACGTGCCGGTGTGGAAGTAGCCCGGATGCAATTGAATGAACAACAGACGGTGCTTTCCAGGACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS TCA 72 bp | CCTTGTAGCCGGTGCGCCACCTCCTTCTCATTCTATTaGGCAAGGAAAAGTCACACAGCCCACCCAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PCSRCATSFSFY*ARKSHTAHPES Trigger: TGACTCTGGGTGGGCTGTGTGACTTTTCCTTGCTCAATAGAATGAGAAGGAGGTGGCGCACCGGCTACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649087.1 ENST00000650334.1 |
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| CDS GCA 72 bp | TCCAGCACCAACGGGGCTGTGACCAATACTGCCTCATaGCCAGTCCCTGATCTTATTTGTGGTAAAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSTNGAVTNTAS*PVPDLICGKAA Trigger: GGCTGCTTTACCACAAATAAGATCAGGGACTGGGCATGAGGCAGTATTGGTCACAGCCCCGTTGGTGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649511.1 |
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| CDS CCA 72 bp | TCTATCTTCTTCATAAGCGAGAGCAATGGCTCCTCCTaGCCCAGACCCCACAGCTCATGTGTGGGATGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SIFFISESNGSS*PRPHSSCVGWN Trigger: GTTCCATCCCACACATGAGCTGTGGGGTCTGGGCCAGGAGGAGCCATTGCTCTCGCTTATGAAGAAGATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649087.1 ENST00000650334.1 |
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| CDS CCA 72 bp | CTGATCCAGCTCTATCTTCTTCATAAGCGAGAGCAATaGCTCCTCCTGGCCCAGACCCCACAGCTCATGTGT | + |
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Preference number: 6 (lower is better) Translates to: LIQLYLLHKREQ*LLLAQTPQLMC Trigger: ACACATGAGCTGTGGGGTCTGGGCCAGGAGGAGCCATTGCTCTCGCTTATGAAGAAGATAGAGCTGGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649087.1 ENST00000650334.1 |
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| CDS CAA 72 bp | TGGAAAGCACAGCGCCGTCCTGGAAAGCACCGTCTGTaGTTCATTCAATTGCATCCGGGCTACTTCCACACC | + |
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Preference number: 6 (lower is better) Translates to: WKAQRRPGKHRL*FIQLHPGYFHT Trigger: GGTGTGGAAGTAGCCCGGATGCAATTGAATGAACAACAGACGGTGCTTTCCAGGACGGCGCTGTGCTTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CAA 72 bp | GGTTCAGTAAATGCCAACGGCCCCCTCCTCCTTTCTTaGTGTGGCTTGAATTTCGGGGTCTTGCAGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GSVNANGPLLLS*CGLNFGVLQAG Trigger: TCCAGCCTGCAAGACCCCGAAATTCAAGCCACACAAAGAAAGGAGGAGGGGGCCGTTGGCATTTACTGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS TCA 72 bp | CCCGTGCTGCTTTCAGCACGTTTAACCTGTAAAATCTaGAAACTACGGAACCAGCTGGTGGGCACAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PVLLSARLTCKI*KLRNQLVGTGL Trigger: CAGCCCTGTGCCCACCAGCTGGTTCCGTAGTTTTCAGATTTTACAGGTTAAACGTGCTGAAAGCAGCACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649087.1 |
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| CDS CCA 72 bp | AAGCACAGCACCATCCTGGAAAGCACAGCGCCGTCCTaGAAAGCACCGTCTGTTGTTCATTCAATTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: KHSTILESTAPS*KAPSVVHSIAS Trigger: GGATGCAATTGAATGAACAACAGACGGTGCTTTCCAGGACGGCGCTGTGCTTTCCAGGATGGTGCTGTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS CAA 72 bp | ACACTTTTTAGTGCAAGGATTTCTGCCCCTCCCTGTTaGATAGCGATCAGAGACGCCTCACCGTGGGCCATC | + |
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Preference number: 6 (lower is better) Translates to: TLFSARISAPPC*IAIRDASPWAI Trigger: GATGGCCCACGGTGAGGCGTCTCTGATCGCTATCAAACAGGGAGGGGCAGAAATCCTTGCACTAAAAAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649511.1 |
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| CDS TCA 72 bp | CCTCGCCTTCACAGACGGAGCTTGATAATACCTGCCTaGAGGGTGTTTGCTGTGAACTGGTCCCTTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PRLHRRSLIIPA*RVFAVNWSLEE Trigger: TTCTTCAAGGGACCAGTTCACAGCAAACACCCTTCAGGCAGGTATTATCAAGCTCCGTCTGTGAAGGCGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417112.2 |
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| CDS TCA 72 bp | GCGGGGTCTGAGGTGTGTGCCTCTGGTACCATTCACTaGTCCAGCTCTATCTTCTTCATAAGCGAGAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: AGSEVCASGTIH*SSSIFFISESN Trigger: ATTGCTCTCGCTTATGAAGAAGATAGAGCTGGATCAGTGAATGGTACCAGAGGCACACACCTCAGACCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649087.1 ENST00000650334.1 |
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| CDS CCA 72 bp | AGTAACCACTCCCGCCCCGAGATTACTGGGTCTAAATaGCACAGGTGTTCTCCTTTTATCCCGATTACCCTT | + |
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Preference number: 6 (lower is better) Translates to: SNHSRPEITGSK*HRCSPFIPITL Trigger: AAGGGTAATCGGGATAAAAGGAGAACACCTGTGCCATTTAGACCCAGTAATCTCGGGGCGGGAGTGGTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS TCA 72 bp | CTGCAGGAGATTATTTATGCAGCTGAATCAAGATGCTaGCTTCAGCACCGTAAAACCCGGCTAGCAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LQEIIYAAESRC*LQHRKTRLAGS Trigger: ACTCCCTGCTAGCCGGGTTTTACGGTGCTGAAGTCAGCATCTTGATTCAGCTGCATAAATAATCTCCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS GCA 72 bp | TGCAGCTGTGTGAACCAACTCTATCGGCAACAAGAATaGATCTTGGACCCCTGCATGCTGACCTGTTACTTT | + |
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Preference number: 6 (lower is better) Translates to: CSCVNQLYRQQE*ILDPCMLTCYF Trigger: AAAGTAACAGGTCAGCATGCAGGGGTCCAAGATGCATTCTTGTTGCCGATAGAGTTGGTTCACACAGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS CCA 72 bp | CTTAAGAAATTAACAACAACCCGATCCCGGCTGCAGTaGAGTCTGAAGTCCCGCAGTTGGTCTGTCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: LKKLTTTRSRLQ*SLKSRSWSVLF Trigger: GAATAAGACAGACCAACTGCGGGACTTCAGACTCCACTGCAGCCGGGATCGGGTTGTTGTTAATTTCTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000417112.2 ENST00000649087.1 ENST00000649511.1 ENST00000650334.1 |
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| CDS TCA 72 bp | GCCCAGTCGGAACAAATAAGTCACAGAGCATTCGTCTaGATTAATTCCAGAGACAACATGTCTCCACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AQSEQISHRAFV*INSRDNMSPPA Trigger: TGCAGGTGGAGACATGTTGTCTCTGGAATTAATTCAGACGAATGCTCTGTGACTTATTTGTTCCGACTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS TCA 72 bp | GAAGAATCTGCTTTGCTCATGATCCTATGCAACCCTTaGGGTCATGGATTGTATCTTGTCAATCTCTACTTC | + |
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Preference number: 6 (lower is better) Translates to: EESALLMILCNP*GHGLYLVNLYF Trigger: GAAGTAGAGATTGACAAGATACAATCCATGACCTCAAGGGTTGCATAGGATCATGAGCAAAGCAGATTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417112.2 |
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| CDS TCA 72 bp | ATGGCACAGGTGTTCTCCTTTTATCCCGATTACCCTTaGAAGGATAGGGAGAAAACATTAGAAATCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: MAQVFSFYPDYP*KDREKTLEIMS Trigger: GGACATGATTTCTAATGTTTTCTCCCTATCCTTTCAAGGGTAATCGGGATAAAAGGAGAACACCTGTGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650334.1 |
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| CDS TCA 72 bp | ATGGATTGTATCTTGTCAATCTCTACTTCCCAGCAATaGGCACCATATTTACTGCATGGTAATTGCCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: MDCILSISTSQQ*APYLLHGNCQV Trigger: TACTTGGCAATTACCATGCAGTAAATATGGTGCTCATTGCTGGGAAGTAGAGATTGACAAGATACAATCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417112.2 |
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| CDS GCA 72 bp | GCAGAATTTTCAAGAAGCAGAAATATTCCCCATCTTTaGTCACATTCCAGTAAGAATAAACACTCACATTGC | + |
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Preference number: 6 (lower is better) Translates to: AEFSRSRNIPHL*SHSSKNKHSHC Trigger: GCAATGTGAGTGTTTATTCTTACTGGAATGTGAGCAAAGATGGGGAATATTTCTGCTTCTTGAAAATTCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649087.1 |
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