RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINGO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000174482

Ensembl transcript IDs: ENST00000308675.5, ENST00000379992.6, ENST00000493941.1, ENST00000613945.3

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTAGTATCCCACTGTGTGAAGGGCTCTGACACATGCCTGCCTGCCTaGCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCAT +
Preference number: 1 (lower is better)
Translates to: LVSHCVKGSDTCLPA*LSMESLHWKSSCFH
Trigger: ATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGTGTCAGAGCCCTTCACACAGTGGGATACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR GCA 90 bp CAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGACACATaGCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCC +
Preference number: 1 (lower is better)
Translates to: QRKHLVSHCVKGSDT*LPACLSMESLHWKS
Trigger: GGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGTGTCAGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR TCA 90 bp ATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTaGCACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTG +
Preference number: 1 (lower is better)
Translates to: IFATQTLSIPLCEGL*HMPACLPFDGESPL
Trigger: CAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGTGTCAGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR TCA 90 bp GAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTaGTACAGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATT +
Preference number: 1 (lower is better)
Translates to: ESLHWKSSCFHRPCF*YRGSCTWLPLNLVI
Trigger: AATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR CCA 90 bp CAGAAGTTAACAGAGTTGAGCAGTTTTGCCTTGGGTCCTGTTTCTTaGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCGCC +
Preference number: 1 (lower is better)
Translates to: QKLTELSSFALGPVS*HPTSDKHISQNISA
Trigger: GGCGGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCTCAACTCTGTTAACTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR GCA 90 bp ATGCCTTTATTTATAGTAACAGAAGTTAACAGAGTTGAGCAGTTTTaGCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACAT +
Preference number: 1 (lower is better)
Translates to: MPLFIVTEVNRVEQF*LGSCFLASYIRQTH
Trigger: ATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCTCAACTCTGTTAACTTCTGTTACTATAAATAAAGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR GCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCGCTCTGACACATGCCTaGCTGCCTGCCTTTCGATGG +
Preference number: 2 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIALTHA*LPAFRW
Trigger: CCATCGAAAGGCAGGCAGGCAGGCATGTGTCAGAGC...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR GCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCAAGGGCTCTGACACATaGCTGCCTGCCTGCCTTTCG +
Preference number: 2 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIKGSDT*LPACLS
Trigger: CGAAAGGCAGGCAGGCAGGCATGTGTCAGAGCCCTT...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR GCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCATTGGAAGTCCTCCTaGTTCCATAGACCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGHWKSS*FHRPCF
Trigger: AAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATG...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR GCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCACATGCCTGCCTGCCTaGCTTTCGATGGAGAGTCTC +
Preference number: 2 (lower is better)
Translates to: GPVSWHPTSDKHISQNISTCLPA*LSMESL
Trigger: GAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR GCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCACATGCCTGCCTGCCTaGCTTTCGATGGAGAGTCTC +
Preference number: 2 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSTCLPA*LSMESL
Trigger: GAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR CCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTAGGGGCAGCTGCACATaGCTGCCTCTTAATCTAGTA +
Preference number: 2 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSRGSCT*LPLNLV
Trigger: TACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR CCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCAGGGGCAGCTGCACATaGCTGCCTCTTAATCTAGTA +
Preference number: 2 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIRGSCT*LPLNLV
Trigger: TACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR CCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCCTGCCTGCCTTTCGATaGAGAGTCTCCATTGGAAGT +
Preference number: 2 (lower is better)
Translates to: SSFALGPVSWHPTSDKHILPAFR*RVSIGS
Trigger: ACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAG...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR CCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTCTGCCTGCCTTTCGATaGAGAGTCTCCATTGGAAGT +
Preference number: 2 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSLPAFR*RVSIGS
Trigger: ACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAG...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAACTGATTACCCACATTaGCAAAGAGACAGTAATGTG +
Preference number: 2 (lower is better)
Translates to: VSIGSPPASIDPAFDTGATDYPH*QRDSNV
Trigger: CACATTACTGTCTCTTTGTCAATGTGGGTAATCAGT...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCCATACTGTCTTACTaGTTACCCACATTGACAAAG +
Preference number: 2 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGAILSY*LPTLTK
Trigger: CTTTGTCAATGTGGGTAATCAGTAAGACAGTATGGC...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACCATAGACCCTGCTTTTaGTACAGGGGCAGCTGCACA +
Preference number: 2 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHHRPCF*YRGSCT
Trigger: TGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATG...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCCATAGACCCTGCTTTTaGTACAGGGGCAGCTGCACA +
Preference number: 2 (lower is better)
Translates to: GPVSWHPTSDKHISQNISHRPCF*YRGSCT
Trigger: TGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATG...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAACTGTGTGAAGGGCTCTaGCACATGCCTGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKLCEGL*HMPACL
Trigger: CAGGCAGGCAGGCATGTGTCAGAGCCCTTCACACAG...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR CAA 90 bp GCCAAATATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTaGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGAC +
Preference number: 2 (lower is better)
Translates to: AKYSGSLLRSPERQY*QRKHLVSHCVKGSD
Trigger: GTCAGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATATTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR GCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAGCTCTGACACATGCCTaGCTGCCTGCCTTTCGATGG +
Preference number: 2 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKALTHA*LPAFRW
Trigger: CCATCGAAAGGCAGGCAGGCAGGCATGTGTCAGAGC...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR CAA 90 bp ACAGAAGTTAACAGAGTTGAGCAGTTTTGCCTTGGGTCCTGTTTCTaGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCGC +
Preference number: 2 (lower is better)
Translates to: TEVNRVEQFCLGSCF*ASYIRQTHLSKYLR
Trigger: GCGGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCTCAACTCTGTTAACTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCACTGATTACCCACATTaGCAAAGAGACAGTAATGTG +
Preference number: 2 (lower is better)
Translates to: SSFALGPVSWHPTSDKHITDYPH*QRDSNV
Trigger: CACATTACTGTCTCTTTGTCAATGTGGGTAATCAGT...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCATTCAGGTTCATTACTaGGATCCCCAGAACGCCAAT +
Preference number: 2 (lower is better)
Translates to: GPVSWHPTSDKHISQNISIQVHY*DPQNAN
Trigger: ATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAAT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR CCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAATGGAGAGTCTCCATTaGAAGTCCTCCTGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKMESLH*KSSCFH
Trigger: ATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCAT...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAATTCAGGTTCATTACTaGGATCCCCAGAACGCCAAT +
Preference number: 2 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKIQVHY*DPQNAN
Trigger: ATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAAT...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAGCCATACTGTCTTACTaGTTACCCACATTGACAAAG +
Preference number: 2 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKAILSY*LPTLTK
Trigger: CTTTGTCAATGTGGGTAATCAGTAAGACAGTATGGC...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR TCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAACTGATTACCCACATTaGCAAAGAGACAGTAATGTG +
Preference number: 2 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKTDYPH*QRDSNV
Trigger: CACATTACTGTCTCTTTGTCAATGTGGGTAATCAGT...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR GCA 72 bp CACTTAGTATCCCACTGTGTGAAGGGCTCTGACACATaGCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCAT +
Preference number: 3 (lower is better)
Translates to: HLVSHCVKGSDT*LPACLSMESLH
Trigger: ATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGTGTCAGAGCCCTTCACACAGTGGGATACTAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR TCA 72 bp CATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTaGTACAGGGGCAGCTGCACATGGCTGCCTCTTAAT +
Preference number: 3 (lower is better)
Translates to: HWKSSCFHRPCF*YRGSCTWLPLN
Trigger: ATTAAGAGGCAGCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR CAA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCGATGGAGAGTCTCCATaGGAAGTCCTCCTGCTTCCA +
Preference number: 3 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSDGESP*EVLLLP
Trigger: TGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATC...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR TCA 72 bp GTCCGTGAGTGTGAGCCAAATATTCAGGTTCATTACTaGGATCCCCAGAACGCCAATATTTGCAACGCAAAC +
Preference number: 3 (lower is better)
Translates to: VRECEPNIQVHY*DPQNANICNAN
Trigger: GTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATATTTGGCTCACACTCACGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR CCA 72 bp ACAGAGTTGAGCAGTTTTGCCTTGGGTCCTGTTTCTTaGCATCCTACATCAGACAAACACATCTCTCAAAAT +
Preference number: 3 (lower is better)
Translates to: TELSSFALGPVS*HPTSDKHISQN
Trigger: ATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCTCAACTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR-3UTR CAA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCCCAGAACGCCAATATTaGCAACGCAAACACTTAGTA +
Preference number: 3 (lower is better)
Translates to: GPVSWHPTSDKHISQNISPERQY*QRKHLV
Trigger: TACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGG...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR GCA 72 bp TTTATAGTAACAGAAGTTAACAGAGTTGAGCAGTTTTaGCTTGGGTCCTGTTTCTTGGCATCCTACATCAGA +
Preference number: 3 (lower is better)
Translates to: FIVTEVNRVEQF*LGSCFLASYIR
Trigger: TCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCTCAACTCTGTTAACTTCTGTTACTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCGCTCTGACACATGCCTaGCTGCCTGCCTTTCGATGG +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCALTHA*LPAFRW
Trigger: CCATCGAAAGGCAGGCAGGCAGGCATGTGTCAGAGC...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCGGTTCTGAGACACATTaGGCACGCGTAGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCGSETH*ARVGSG
Trigger: TCCGCTTCCTACGCGTGCTCAATGTGTCTCAGAACC...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCAGTGAGGCTCAATGGTaGGAAGCTGGGCCCCCACTA +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGSEAQW*EAGPPL
Trigger: TAGTGGGGGCCCAGCTTCGCACCATTGAGCCTCACT...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCAAGGGCTCTGACACATaGCTGCCTGCCTGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGKGSDT*LPACLS
Trigger: CGAAAGGCAGGCAGGCAGGCATGTGTCAGAGCCCTT...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCATGAGGCTGCGGAGGTaGGAGAGGGCTTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGMRLRR*ERASVG
Trigger: ACCAACAGAAGCCCTCTCCCACCTCCGCAGCCTCAT...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAAGGAGTGAGGCTCAATaGTGCGAAGCTGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRRSEAQ*CEAGPP
Trigger: TGGGGGCCCAGCTTCGCACCATTGAGCCTCACTCCT...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCCTCTTGGCCACTGGGTaGAATCCAAGCTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCLLATG*NPSWVV
Trigger: AACTACCCAGCTTGGATTTCACCCAGTGGCCAAGAG...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAAGCCCTTGGAAGGAGTaGGGCTCAATGGTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRSPWKE*GSMVRS
Trigger: GCTTCGCACCATTGAGCCTCACTCCTTCCAAGGGCT...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGGTTCTGAGACACATTaGGCACGCGTAGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGGSETH*ARVGSG
Trigger: TCCGCTTCCTACGCGTGCTCAATGTGTCTCAGAACC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAGCTCTGACACATGCCTaGCTGCCTGCCTTTCGATGG +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRALTHA*LPAFRW
Trigger: CCATCGAAAGGCAGGCAGGCAGGCATGTGTCAGAGC...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACACCAAACTGCAGGGTaGGCTGTCGCTGCAAGATCC +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRHQTAG*AVAARS
Trigger: GGATCTTGCAGCGACAGCCCACCCTGCAGTTTGGTG...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGCACACATAGGTTGCTaGCCACCAAACTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGAHIGC*PPNCRV
Trigger: CACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTGGCCGTGTGAAGCATaGCTCCACTTCTTAGTCTAC +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCWPCEA*LHFLVY
Trigger: GTAGACTAAGAAGTGGAGTCATGCTTCACACGGCCA...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGAATGGCTGCCAGCATaGTATGGCCGTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGEWLPA*YGRVKH
Trigger: ATGCTTCACACGGCCATATCATGCTGGCAGCCATTC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAGATTGGACAGCCCCGTaGATACTCCCAAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRDWTAP*ILPKGP
Trigger: TGGTCCCTTTGGGAGTATTCACGGGGCTGTCCAATC...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAAGCCCTTGGAAGGAGTaGGGCTCAATGGTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGASPWKE*GSMVRS
Trigger: GCTTCGCACCATTGAGCCTCACTCCTTCCAAGGGCT...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCCAGTTAAGGAGGCTGTaGAGGTATCATTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCQLRRL*RYHSQQ
Trigger: CTGCTGGGAATGATACCTTCACAGCCTCCTTAACTG...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCTGGTTTCGATGGGAATaGCCTCTGGGATGGCGATCA +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGWFRWE*PLGWRS
Trigger: TGATCGCCATCCCAGAGGGCATTCCCATCGAAACCA...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCAGCACACATAGGTTaGTGGCCACCAAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRPAHIG*WPPNCR
Trigger: CCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGG...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTGCTGTTTTTGTGCTTaGCTTTCCCTCGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCCCFCA*LSLGST
Trigger: TGTGGAGCCGAGGGAAAGGCAAGCACAAAAACAGCA...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAACATGCCTGCCTGCCTaGCTTTCGATGGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRTCLPA*LSMESL
Trigger: GAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGAGGAGTGAGGCTCAATaGTGCGAAGCTGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGRSEAQ*CEAGPP
Trigger: TGGGGGCCCAGCTTCGCACCATTGAGCCTCACTCCT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAGCACACATAGGTTGCTaGCCACCAAACTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRAHIGC*PPNCRV
Trigger: CACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGC...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACTCACGGATGGTGTCTaGGCCAGCACACATAGGTTG +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRLTDGV*ASTHRL
Trigger: CAACCTATGTGTGCTGGCCCAGACACCATCCGTGAG...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCCACAAGCCAACTGCTTaGAACGAACCTGCAACAAAC +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCHKPTA*NEPATN
Trigger: GTTTGTTGCAGGTTCGTTTCAAGCAGTTGGCTTGTG...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR TCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCTGGCCGTGTGAAGCATaGCTCCACTTCTTAGTCTAC +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGWPCEA*LHFLVY
Trigger: GTAGACTAAGAAGTGGAGTCATGCTTCACACGGCCA...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCCATGATATGGCCGTGTaGAGCATGACTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCHDMAV*SMTPLL
Trigger: AAGAAGTGGAGTCATGCTTCACACGGCCATATCATG...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCATTGGTGTTGGTGACTaGAAGGGATGTGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCIGVGD*KGCEVE
Trigger: CTCAACCTCACATCCCTTTCAGTCACCAACACCAAT...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCCAGTTAAGGAGGCTGTaGAGGTATCATTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGQLRRL*RYHSQQ
Trigger: CTGCTGGGAATGATACCTTCACAGCCTCCTTAACTG...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCGAAAAATCCAACCCTTaGCGTCTCCCACACAAAGCT +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCEKSNP*RLPHKA
Trigger: AGCTTTGTGTGGGAGACGGCAAGGGTTGGATTTTTC...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGAGTGAGGCTCAATGGTaGGAAGCTGGGCCCCCACTA +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGSEAQW*EAGPPL
Trigger: TAGTGGGGGCCCAGCTTCGCACCATTGAGCCTCACT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTGCTGGCCACCAAACTaGAGGGTGGGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHICWPPN*RVGCRC
Trigger: GCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCA...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGGTCTCCATCTGCACTaGATTCTAGCTGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGGLHLH*ILAGLS
Trigger: AGACAGTCCAGCTAGAATGCAGTGCAGATGGAGACC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCACAGGAAATCACAGGCTaGGGGTCTCCATCTGCACTG +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAQEITG*GSPSAL
Trigger: CAGTGCAGATGGAGACCCGCAGCCTGTGATTTCCTG...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGATGGGAATGCCCTCTaGGATGGCGATCAATCGCCT +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGADGNAL*DGDQSP
Trigger: AGGCGATTGATCGCCATCCCAGAGGGCATTCCCATC...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCAGATTTTGGTTTCGATaGGAATGCCCTCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCRFWFR*ECPLGW
Trigger: CCATCCCAGAGGGCATTCCCATCGAAACCAAAATCT...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCGACCGTAGAGGCTATTaGCAGGCATCATATCCAGTA +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCDRRGY*QASYPV
Trigger: TACTGGATATGATGCCTGCCAATAGCCTCTACGGTC...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCACACATAGGTTGCTaGCCACCAAACTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAAHIGC*PPNCRV
Trigger: CACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGC...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACATCACCCAACACGGTaGCTCTTCCATTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRHHPTR*LFHWTW
Trigger: CCAAGTCCAATGGAAGAGCCACCGTGTTGGGTGATG...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCCTGCCTGCCTTTCGATaGAGAGTCTCCATTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGLPAFR*RVSIGS
Trigger: ACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAG...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGAGCCCTTGGAAGGAGTaGGGCTCAATGGTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILSPWKE*GSMVRS
Trigger: GCTTCGCACCATTGAGCCTCACTCCTTCCAAGGGCT...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGTTTCCAGCAGGTTCTaGGACACATTGAGCACGCGT +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAVSSRF*DTLSTR
Trigger: ACGCGTGCTCAATGTGTCTCAGAACCTGCTGGAAAC...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCCTGTGTGAAGGGCTCTaGCACATGCCTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHILCEGL*HMPACL
Trigger: CAGGCAGGCAGGCATGTGTCAGAGCCCTTCACACAG...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCATTCAGGTTCATTACTaGGATCCCCAGAACGCCAAT +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCIQVHY*DPQNAN
Trigger: ATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAAT...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGAAAAATCCAACCCTTaGCGTCTCCCACACAAAGCT +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGEKSNP*RLPHKA
Trigger: AGCTTTGTGTGGGAGACGGCAAGGGTTGGATTTTTC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGAGACCCAGGAATGGCTaGCAGCATGATATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGRPRNG*QHDMAV
Trigger: CACGGCCATATCATGCTGGCAGCCATTCCTGGGTCT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCATTCTCCAGGGTGAGCTaGTCCAAGCTAAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAFSRVS*SKLRSP
Trigger: TGGGCTTCTTAGCTTGGAGCAGCTCACCCTGGAGAA...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCTCTAGCTGGACTGTCTaGCCTTCATCTACTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGSSWTV*PSSTSR
Trigger: TCTGCTAGTAGATGAAGGGCAGACAGTCCAGCTAGA...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAGGTCTCCATCTGCACTaGATTCTAGCTGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRGLHLH*ILAGLS
Trigger: AGACAGTCCAGCTAGAATGCAGTGCAGATGGAGACC...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGACATGCCTGCCTGCCTaGCTTTCGATGGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGTCLPA*LSMESL
Trigger: GAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAATGAGGCTGCGGAGGTaGGAGAGGGCTTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTMRLRR*ERASVG
Trigger: ACCAACAGAAGCCCTCTCCCACCTCCGCAGCCTCAT...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGATGAGGCTGCGGAGGTaGGAGAGGGCTTCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILMRLRR*ERASVG
Trigger: ACCAACAGAAGCCCTCTCCCACCTCCGCAGCCTCAT...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGACCGTAGAGGCTATTaGCAGGCATCATATCCAGTA +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGDRRGY*QASYPV
Trigger: TACTGGATATGATGCCTGCCAATAGCCTCTACGGTC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTGGCATTGGTGCCATTaGAAATGGTGTCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCWHWCH*KWCHWS
Trigger: ACTCCAATGACACCATTTCCAATGGCACCAATGCCA...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAAGTGCAGGCAGCTCATaGTACAGCTTTCTGATGGCA +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGASAGSS*YSFLMA
Trigger: TGCCATCAGAAAGCTGTATCATGAGCTGCCTGCACT...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCATTCGGTGCTCTGCTCTaGGCTTCTTCTCATAACCCT +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAFGALL*ASSHNP
Trigger: AGGGTTATGAGAAGAAGCTCAGAGCAGAGCACCGAA...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGGATTGGACAGCCCCGTaGATACTCCCAAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGDWTAP*ILPKGP
Trigger: TGGTCCCTTTGGGAGTATTCACGGGGCTGTCCAATC...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAATTGGTGTTGGTGACTaGAAGGGATGTGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRIGVGD*KGCEVE
Trigger: CTCAACCTCACATCCCTTTCAGTCACCAACACCAAT...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCAAATCATTTTCATGTTaGACCTCCTGGGTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCKSFSC*TSWVQL
Trigger: TAGCTGGACCCAGGAGGTTCAACATGAAAATGATTT...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCATTCAGGTTCATTACTaGGATCCCCAGAACGCCAAT +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGIQVHY*DPQNAN
Trigger: ATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAAT...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCCTCACTTCACCAGTTTaGATTGTTGGGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGLTSPV*IVGLFM
Trigger: CATGAAGAGCCCAACAATTCAAACTGGTGAAGTGAG...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAGAAAAATCCAACCCTTaGCGTCTCCCACACAAAGCT +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHREKSNP*RLPHKA
Trigger: AGCTTTGTGTGGGAGACGGCAAGGGTTGGATTTTTC...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGAGACCCAGGAATGGCTaGCAGCATGATATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILRPRNG*QHDMAV
Trigger: CACGGCCATATCATGCTGGCAGCCATTCCTGGGTCT...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAAGACCCAGGAATGGCTaGCAGCATGATATGGCCGTG +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTRPRNG*QHDMAV
Trigger: CACGGCCATATCATGCTGGCAGCCATTCCTGGGTCT...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCACCAGCTTTAGACGATTaGCTTTTAGGCGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAPALDD*LLGGGN
Trigger: GTTCCCTCCGCCTAAAAGGCAATCGTCTAAAGCTGG...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCAGTGAGGCTCAATGGTaGGAAGCTGGGCCCCCACTA +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHISEAQW*EAGPPL
Trigger: TAGTGGGGGCCCAGCTTCGCACCATTGAGCCTCACT...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCTGCTGGCCACCAAACTaGAGGGTGGGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISCWPPN*RVGCRC
Trigger: GCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCA...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGCAGGAAATCACAGGCTaGGGGTCTCCATCTGCACTG +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILQEITG*GSPSAL
Trigger: CAGTGCAGATGGAGACCCGCAGCCTGTGATTTCCTG...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGATCAATGCTGTTTTTGTaGTTGCCTTTCCCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRSMLFL*LPFPRL
Trigger: GAGCCGAGGGAAAGGCAAGCACAAAAACAGCATTGA...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACATTGGAAGTCCTCCTaGTTCCATAGACCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRHWKSS*FHRPCF
Trigger: AAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATG...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAAATTCCCGCATGTCATaGGCAGCAGCATCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGANSRMS*AAASLR
Trigger: TCTGAGAGATGCTGCTGCCCATGACATGCGGGAATT...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCACCCACACAAAGCTCTTaGCCACTGGGTGAAATCCAA +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAPTQSS*PLGEIQ
Trigger: TTGGATTTCACCCAGTGGCCAAGAGCTTTGTGTGGG...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGATGGTGCCATTGGAAATaGTGTCATTGGAGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRWCHWK*CHWSRS
Trigger: TGACCGACTCCAATGACACCATTTCCAATGGCACCA...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGAGTGCAGGCAGCTCATaGTACAGCTTTCTGATGGCA +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGSAGSS*YSFLMA
Trigger: TGCCATCAGAAAGCTGTATCATGAGCTGCCTGCACT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCACTCACTTACCAGTTTaGATTGTTGGGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGTHLPV*IVGLFM
Trigger: CATGAAGAGCCCAACAATTCAAACTGGTAAGTGAGT...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR TCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCACACAAGCCAACTGCTTaGAACGAACCTGCAACAAAC +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAHKPTA*NEPATN
Trigger: GTTTGTTGCAGGTTCGTTTCAAGCAGTTGGCTTGTG...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR TCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGATTGGACAGCCCCGTaGATACTCCCAAAGGGACCA +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSDWTAP*ILPKGP
Trigger: TGGTCCCTTTGGGAGTATTCACGGGGCTGTCCAATC...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGGTTTCCAGCAGGTTCTaGGACACATTGAGCACGCGT +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILVSSRF*DTLSTR
Trigger: ACGCGTGCTCAATGTGTCTCAGAACCTGCTGGAAAC...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGTACATCCCGCTGTCTTaGTCCTGGGCAAAGCGGATT +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILYIPLS*SWAKRI
Trigger: AATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTA...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGTACATCCCGCTGTCTTaGTCCTGGGCAAAGCGGATT +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGYIPLS*SWAKRI
Trigger: AATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTA...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGCAGTTAAGGAGGCTGTaGAGGTATCATTCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGQLRRL*RYHSQQ
Trigger: CTGCTGGGAATGATACCTTCACAGCCTCCTTAACTG...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCATAGACCCTGCTTTTaGTACAGGGGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGHRPCF*YRGSCT
Trigger: TGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATG...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACACATAGACCCTGCTTTTaGTACAGGGGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTHRPCF*YRGSCT
Trigger: TGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATG...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACCTGTGTGAAGGGCTCTaGCACATGCCTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHLCEGL*HMPACL
Trigger: CAGGCAGGCAGGCATGTGTCAGAGCCCTTCACACAG...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGAGTGGCCACTTTCGGTaGTCTGCTCTGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILSGHFR*SALSFF
Trigger: GAAGAAGCTCAGAGCAGAGCACCGAAAGTGGCCACT...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGTCCCACAAGCCAACTaGTTGAAACGAACCTGCAAC +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGVPQAN*LKRTCN
Trigger: GTTGCAGGTTCGTTTCAAGCAGTTGGCTTGTGGGAC...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR GCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGTGGTTTCGATGGGAATaGCCTCTGGGATGGCGATCA +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILWFRWE*PLGWRS
Trigger: TGATCGCCATCCCAGAGGGCATTCCCATCGAAACCA...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGTGGTTTCGATGGGAATaGCCTCTGGGATGGCGATCA +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGWFRWE*PLGWRS
Trigger: TGATCGCCATCCCAGAGGGCATTCCCATCGAAACCA...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGTTCTCCAGGGTGAGCTaGTCCAAGCTAAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILFSRVS*SKLRSP
Trigger: TGGGCTTCTTAGCTTGGAGCAGCTCACCCTGGAGAA...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGTCAGAGAACATGCCTaGTTCAATAGTGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAVREHA*FNSADG
Trigger: CCCATCAGCACTATTGAAGCAGGCATGTTCTCTGAC...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCCCAGCACACATAGGTTaGTGGCCACCAAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIPAHIG*WPPNCR
Trigger: CCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGG...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCTCATCTACTAGCAGATaGTGCAACTTCTTTTCACGG +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGSSTSR*CNFFSR
Trigger: CCGTGAAAAGAAGTTGCAGCATCTGCTAGTAGATGA...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCATCTAGCTGGACTGTCTaGCCTTCATCTACTAGCAGA +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGASSWTV*PSSTSR
Trigger: TCTGCTAGTAGATGAAGGGCAGACAGTCCAGCTAGA...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCACATGCCTGCCTGCCTaGCTTTCGATGGAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHITCLPA*LSMESL
Trigger: GAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCGATGGGAATGCCCTCTaGGATGGCGATCAATCGCCT +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIDGNAL*DGDQSP
Trigger: AGGCGATTGATCGCCATCCCAGAGGGCATTCCCATC...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCAGGAGTGAGGCTCAATaGTGCGAAGCTGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISRSEAQ*CEAGPP
Trigger: TGGGGGCCCAGCTTCGCACCATTGAGCCTCACTCCT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCAAGACCTCTCACGGATaGTGTCTGGGCCAGCACACA +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIKTSHG*CLGQHT
Trigger: TGTGTGCTGGCCCAGACACCATCCGTGAGAGGTCTT...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCTTGGGTCCTGTTTCTTaGCATCCTACATCAGACAAA +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGLGPVS*HPTSDK
Trigger: TTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAA...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGTTCGGTGCTCTGCTCTaGGCTTCTTCTCATAACCCT +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGFGALL*ASSHNP
Trigger: AGGGTTATGAGAAGAAGCTCAGAGCAGAGCACCGAA...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCGAATGGCTGCCAGCATaGTATGGCCGTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIEWLPA*YGRVKH
Trigger: ATGCTTCACACGGCCATATCATGCTGGCAGCCATTC...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCTTCCAGCAGAGGATATaGTATGAATTCTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGFQQRI*YEFFRV
Trigger: AACCCTGAAGAATTCATATCATATCCTCTGCTGGAA...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCACTGATTACCCACATTaGCAAAGAGACAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGTDYPH*QRDSNV
Trigger: CACATTACTGTCTCTTTGTCAATGTGGGTAATCAGT...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCGTTATAGGTTCCTCATaGTTTATCCTGGTTTACTCT +
Preference number: 4 (lower is better)
Translates to: TCLPACLSMESLHWKSSCVIGSS*FILVYS
Trigger: AGAGTAAACCAGGATAAATCATGAGGAACCTATAAC...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS-3UTR GCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGCCACTTTCGGTGCTCTaGTCTGAGCTTCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGPLSVL*SELLLI
Trigger: TATGAGAAGAAGCTCAGAGCAGAGCACCGAAAGTGG...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCCAGCTTTAGACGATTaGCTTTTAGGCGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGPALDD*LLGGGN
Trigger: GTTCCCTCCGCCTAAAAGGCAATCGTCTAAAGCTGG...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGATCATCTACTAGCAGATaGTGCAACTTCTTTTCACGG +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRSSTSR*CNFFSR
Trigger: CCGTGAAAAGAAGTTGCAGCATCTGCTAGTAGATGA...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCCATACTCAAGGTCAATaGTGTTTTTGTGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGHTQGQ*CFCACL
Trigger: AAGGCAAGCACAAAAACAGCATTGACCTTGAGTATG...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACGCTCTGACACATGCCTaGCTGCCTGCCTTTCGATGG +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHALTHA*LPAFRW
Trigger: CCATCGAAAGGCAGGCAGGCAGGCATGTGTCAGAGC...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGAAAGCTCTTGGCCACTaGGTGAAATCCAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGKALGH*VKSKLG
Trigger: ACCCAGCTTGGATTTCACCCAGTGGCCAAGAGCTTT...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGAATGCCCTCTGGGATaGCGATCAATCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSECPLG*RSIAFC
Trigger: ACAGAAGGCGATTGATCGCCATCCCAGAGGGCATTC...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACCACCAAACTGCAGGGTaGGCTGTCGCTGCAAGATCC +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHHQTAG*AVAARS
Trigger: GGATCTTGCAGCGACAGCCCACCCTGCAGTTTGGTG...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGAAAGGGCAGTGCTATaGAAATCCTTGAAAGACCTC +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAERAVL*KSLKDL
Trigger: GAGGTCTTTCAAGGATTTCCATAGCACTGCCCTTTC...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGTGGTGCCATTGGAAATaGTGTCATTGGAGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGWCHWK*CHWSRS
Trigger: TGACCGACTCCAATGACACCATTTCCAATGGCACCA...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGAGGGGCAGCTGCACATaGCTGCCTCTTAATCTAGTA +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGRGSCT*LPLNLV
Trigger: TACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGATGGAGAGTCTCCATTaGAAGTCCTCCTGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGMESLH*KSSCFH
Trigger: ATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCAT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTGCCTGCCTTTCGATaGAGAGTCTCCATTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGLPAFR*RVSIGS
Trigger: ACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAG...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGCTGCCTGCCTTTCGATaGAGAGTCTCCATTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILLPAFR*RVSIGS
Trigger: ACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAG...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCACATGATACAGCTTTCTaGTGGCACTCATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAHDTAF*WHSSIP
Trigger: AGGAATTGATGAGTGCCATCAGAAAGCTGTATCATG...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTGGCCGTGTGAAGCATaGCTCCACTTCTTAGTCTAC +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIWPCEA*LHFLVY
Trigger: GTAGACTAAGAAGTGGAGTCATGCTTCACACGGCCA...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGCATGATATGGCCGTGTaGAGCATGACTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILHDMAV*SMTPLL
Trigger: AAGAAGTGGAGTCATGCTTCACACGGCCATATCATG...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCGGTTCTGAGACACATTaGGCACGCGTAGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSGSETH*ARVGSG
Trigger: TCCGCTTCCTACGCGTGCTCAATGTGTCTCAGAACC...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGTGCTATGGAAATCCTTaGAAGACCTCTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILCYGNP*KTSHGW
Trigger: CCATCCGTGAGAGGTCTTTCAAGGATTTCCATAGCA...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGATGCTTGAAACGAACCTaGAACAAACAAGATGAGACT +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRCLKRT*NKQDET
Trigger: AGTCTCATCTTGTTTGTTGCAGGTTCGTTTCAAGCA...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR GCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAATGCTGGCCACCAAACTaGAGGGTGGGCTGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKCWPPN*RVGCRC
Trigger: GCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCA...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACCCAGCACACATAGGTTaGTGGCCACCAAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHPAHIG*WPPNCR
Trigger: CCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGG...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACCAGGAAATCACAGGCTaGGGGTCTCCATCTGCACTG +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHQEITG*GSPSAL
Trigger: CAGTGCAGATGGAGACCCGCAGCCTGTGATTTCCTG...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCAGCGGATTTCCAAGGTaGCATCACCCAACACGGTGG +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISSGFPR*HHPTRW
Trigger: CCACCGTGTTGGGTGATGGCACCTTGGAAATCCGCT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACAGCGGATTTCCAAGGTaGCATCACCCAACACGGTGG +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHSGFPR*HHPTRW
Trigger: CCACCGTGTTGGGTGATGGCACCTTGGAAATCCGCT...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCAGCGGATTTCCAAGGTaGCATCACCCAACACGGTGG +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSSGFPR*HHPTRW
Trigger: CCACCGTGTTGGGTGATGGCACCTTGGAAATCCGCT...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTTGCTGTTTTTGTGCTTaGCTTTCCCTCGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSCCFCA*LSLGST
Trigger: TGTGGAGCCGAGGGAAAGGCAAGCACAAAAACAGCA...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGTCAATGCTGTTTTTGTaGTTGCCTTTCCCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILSMLFL*LPFPRL
Trigger: GAGCCGAGGGAAAGGCAAGCACAAAAACAGCATTGA...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACATACTCAAGGTCAATaGTGTTTTTGTGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PACLSMESLHWKSSCFHRHTQGQ*CFCACL
Trigger: AAGGCAAGCACAAAAACAGCATTGACCTTGAGTATG...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACACTAACAGATTTGTTCTaGGCAGAGCACTCACAGCGA +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTLTDLF*AEHSQR
Trigger: TCGCTGTGAGTGCTCTGCCCAGAACAAATCTGTTAG...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTAACAGATTTGTTCTaGGCAGAGCACTCACAGCGA +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGLTDLF*AEHSQR
Trigger: TCGCTGTGAGTGCTCTGCCCAGAACAAATCTGTTAG...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACGATGGGAATGCCCTCTaGGATGGCGATCAATCGCCT +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHDGNAL*DGDQSP
Trigger: AGGCGATTGATCGCCATCCCAGAGGGCATTCCCATC...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAAGATTTTGGTTTCGATaGGAATGCCCTCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTRFWFR*ECPLGW
Trigger: CCATCCCAGAGGGCATTCCCATCGAAACCAAAATCT...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCTCTAGGTGTTTCAGGTaGAACAATCTTTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGSRCFR*NNLLKA
Trigger: TGCCTTTAAAAGATTGTTCCACCTGAAACACCTAGA...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACCTCACGGATGGTGTCTaGGCCAGCACACATAGGTTG +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHLTDGV*ASTHRL
Trigger: CAACCTATGTGTGCTGGCCCAGACACCATCCGTGAG...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACAAGACCTCTCACGGATaGTGTCTGGGCCAGCACACA +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHKTSHG*CLGQHT
Trigger: TGTGTGCTGGCCCAGACACCATCCGTGAGAGGTCTT...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCACCAGGGAAAAAGTATTaGCATTGGTGCCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAPGKKY*HWCHWK
Trigger: TTTCCAATGGCACCAATGCCAATACTTTTTCCCTGG...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGCATGATACAGCTTTCTaGTGGCACTCATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGHDTAF*WHSSIP
Trigger: AGGAATTGATGAGTGCCATCAGAAAGCTGTATCATG...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCGAATGGCTGCCAGCATaGTATGGCCGTGTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSEWLPA*YGRVKH
Trigger: ATGCTTCACACGGCCATATCATGCTGGCAGCCATTC...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCGTTTCCAGCAGGTTCTaGGACACATTGAGCACGCGT +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSVSSRF*DTLSTR
Trigger: ACGCGTGCTCAATGTGTCTCAGAACCTGCTGGAAAC...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCTACATCCCGCTGTCTTaGTCCTGGGCAAAGCGGATT +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSYIPLS*SWAKRI
Trigger: AATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTA...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTAAAGAGACAGTAATGTaGGGGGTGGGCCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSKETVM*GVGLQI
Trigger: GATTTGAAGGCCCACCCCTCACATTACTGTCTCTTT...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAAGTGGTAGAAAATGCTaGATAATTGTCCGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGASGRKC*IIVREC
Trigger: ACACTCACGGACAATTATTCAGCATTTTCTACCACT...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGTAGGTAACGGAAGGTaGAATCACACTTGGATCTAT +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGVGNGR*NHTWIY
Trigger: ATAGATCCAAGTGTGATTTCACCTTCCGTTACCTAC...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGTCTGCATGAATCTTTaGAAAATCCAACCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTVCMNL*KIQPLP
Trigger: CGGCAAGGGTTGGATTTTTCAAAGATTCATGCAGAC...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613945.3
CDS-3UTR GCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCCCACTTTCGGTGCTCTaGTCTGAGCTTCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIPLSVL*SELLLI
Trigger: TATGAGAAGAAGCTCAGAGCAGAGCACCGAAAGTGG...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTCCACTTTCGGTGCTCTaGTCTGAGCTTCTTCTCATA +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSPLSVL*SELLLI
Trigger: TATGAGAAGAAGCTCAGAGCAGAGCACCGAAAGTGG...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCAGTGGCCACTTTCGGTaGTCTGCTCTGAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSSGHFR*SALSFF
Trigger: GAAGAAGCTCAGAGCAGAGCACCGAAAGTGGCCACT...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCATTGTTGATATTGAGATaGTTCAGATGCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGALLILR*FRCRLM
Trigger: CATCAGCCTGCATCTGAAGCATCTCAATATCAACAA...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGTCAGAGAACATGCCTaGTTCAATAGTGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSVREHA*FNSADG
Trigger: CCCATCAGCACTATTGAAGCAGGCATGTTCTCTGAC...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAAAGTATTGGCATTGGTaGCATTGGAAATGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAKYWHW*HWKWCH
Trigger: ATGACACCATTTCCAATGGCACCAATGCCAATACTT...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCCATTGGAAGTCCTCCTaGTTCCATAGACCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIHWKSS*FHRPCF
Trigger: AAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATG...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCGAATGCCCTCTGGGATaGCGATCAATCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISECPLG*RSIAFC
Trigger: ACAGAAGGCGATTGATCGCCATCCCAGAGGGCATTC...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACGAATGCCCTCTGGGATaGCGATCAATCGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHECPLG*RSIAFC
Trigger: ACAGAAGGCGATTGATCGCCATCCCAGAGGGCATTC...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGAAAGGGCAGTGCTATaGAAATCCTTGAAAGACCTC +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTERAVL*KSLKDL
Trigger: GAGGTCTTTCAAGGATTTCCATAGCACTGCCCTTTC...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACCATCACCCAACACGGTaGCTCTTCCATTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHHHPTR*LFHWTW
Trigger: CCAAGTCCAATGGAAGAGCCACCGTGTTGGGTGATG...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTGGTGCCATTGGAAATaGTGTCATTGGAGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIWCHWK*CHWSRS
Trigger: TGACCGACTCCAATGACACCATTTCCAATGGCACCA...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTCGGTGCTCTGCTCTaGGCTTCTTCTCATAACCCT +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHFGALL*ASSHNP
Trigger: AGGGTTATGAGAAGAAGCTCAGAGCAGAGCACCGAA...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGATCAATCGCCTTCTGTaGCAGCTAACAGATTTGTTC +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGINRLL*QLTDLF
Trigger: GAACAAATCTGTTAGCTGTCACAGAAGGCGATTGAT...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGCCATACTGTCTTACTaGTTACCCACATTGACAAAG +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTAILSY*LPTLTK
Trigger: CTTTGTCAATGTGGGTAATCAGTAAGACAGTATGGC...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGGTAGGTAACGGAAGGTaGAATCACACTTGGATCTAT +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGVGNGR*NHTWIY
Trigger: ATAGATCCAAGTGTGATTTCACCTTCCGTTACCTAC...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCGTCCCACAAGCCAACTaGTTGAAACGAACCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISVPQAN*LKRTCN
Trigger: GTTGCAGGTTCGTTTCAAGCAGTTGGCTTGTGGGAC...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR GCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACCCAGCTTTAGACGATTaGCTTTTAGGCGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHPALDD*LLGGGN
Trigger: GTTCCCTCCGCCTAAAAGGCAATCGTCTAAAGCTGG...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGTTGTTGATATTGAGATaGTTCAGATGCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGLLILR*FRCRLM
Trigger: CATCAGCCTGCATCTGAAGCATCTCAATATCAACAA...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCTGCTGTTTTTGTGCTTaGCTTTCCCTCGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSCCFCA*LSLGST
Trigger: TGTGGAGCCGAGGGAAAGGCAAGCACAAAAACAGCA...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCAATTCCCGCATGTCATaGGCAGCAGCATCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISNSRMS*AAASLR
Trigger: TCTGAGAGATGCTGCTGCCCATGACATGCGGGAATT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCAAAGCTCTTGGCCACTaGGTGAAATCCAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISKALGH*VKSKLG
Trigger: ACCCAGCTTGGATTTCACCCAGTGGCCAAGAGCTTT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAACACCAAACTGCAGGGTaGGCTGTCGCTGCAAGATCC +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKHQTAG*AVAARS
Trigger: GGATCTTGCAGCGACAGCCCACCCTGCAGTTTGGTG...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCAGGGGCAGCTGCACATaGCTGCCTCTTAATCTAGTA +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISRGSCT*LPLNLV
Trigger: TACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGTTGGGTCCTGTTTCTTaGCATCCTACATCAGACAAA +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGLGPVS*HPTSDK
Trigger: TTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAA...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCCATGATACAGCTTTCTaGTGGCACTCATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIHDTAF*WHSSIP
Trigger: AGGAATTGATGAGTGCCATCAGAAAGCTGTATCATG...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGATTTCCAGGCTCATGTaGTTAAAAATCCACTGGACA +
Preference number: 4 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGISRLM*LKIHWT
Trigger: TGTCCAGTGGATTTTTAATCACATGAGCCTGGAAAT...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCCATGATATGGCCGTGTaGAGCATGACTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISHDMAV*SMTPLL
Trigger: AAGAAGTGGAGTCATGCTTCACACGGCCATATCATG...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTATCAATCGCCTTCTGTaGCAGCTAACAGATTTGTTC +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSINRLL*QLTDLF
Trigger: GAACAAATCTGTTAGCTGTCACAGAAGGCGATTGAT...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCATCAATCGCCTTCTGTaGCAGCTAACAGATTTGTTC +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIINRLL*QLTDLF
Trigger: GAACAAATCTGTTAGCTGTCACAGAAGGCGATTGAT...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCATTGGTGTTGGTGACTaGAAGGGATGTGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSIGVGD*KGCEVE
Trigger: CTCAACCTCACATCCCTTTCAGTCACCAACACCAAT...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCTGCTATGGAAATCCTTaGAAGACCTCTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISCYGNP*KTSHGW
Trigger: CCATCCGTGAGAGGTCTTTCAAGGATTTCCATAGCA...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCTGCTATGGAAATCCTTaGAAGACCTCTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSCYGNP*KTSHGW
Trigger: CCATCCGTGAGAGGTCTTTCAAGGATTTCCATAGCA...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCAAATCATTTTCATGTTaGACCTCCTGGGTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIKSFSC*TSWVQL
Trigger: TAGCTGGACCCAGGAGGTTCAACATGAAAATGATTT...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCAAAGAGACAGTAATGTaGGGGGTGGGCCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSKETVM*GVGLQI
Trigger: GATTTGAAGGCCCACCCCTCACATTACTGTCTCTTT...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACGTCAGAGAACATGCCTaGTTCAATAGTGCTGATGGG +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHVREHA*FNSADG
Trigger: CCCATCAGCACTATTGAAGCAGGCATGTTCTCTGAC...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCTCTAGCTGGACTGTCTaGCCTTCATCTACTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSSSWTV*PSSTSR
Trigger: TCTGCTAGTAGATGAAGGGCAGACAGTCCAGCTAGA...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACACATACTCAAGGTCAATaGTGTTTTTGTGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTHTQGQ*CFCACL
Trigger: AAGGCAAGCACAAAAACAGCATTGACCTTGAGTATG...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCATTGGAAGTCCTCCTaGTTCCATAGACCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSHWKSS*FHRPCF
Trigger: AAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATG...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCAGATTTTGGTTTCGATaGGAATGCCCTCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISRFWFR*ECPLGW
Trigger: CCATCCCAGAGGGCATTCCCATCGAAACCAAAATCT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCGACCGTAGAGGCTATTaGCAGGCATCATATCCAGTA +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSDRRGY*QASYPV
Trigger: TACTGGATATGATGCCTGCCAATAGCCTCTACGGTC...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAACTCACGGATGGTGTCTaGGCCAGCACACATAGGTTG +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKLTDGV*ASTHRL
Trigger: CAACCTATGTGTGCTGGCCCAGACACCATCCGTGAG...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAAAGACCTCTCACGGATaGTGTCTGGGCCAGCACACA +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKKTSHG*CLGQHT
Trigger: TGTGTGCTGGCCCAGACACCATCCGTGAGAGGTCTT...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTCCAGGGAAAAAGTATTaGCATTGGTGCCATTGGAAA +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSPGKKY*HWCHWK
Trigger: TTTCCAATGGCACCAATGCCAATACTTTTTCCCTGG...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCATGGAGAGTCTCCATTaGAAGTCCTCCTGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSMESLH*KSSCFH
Trigger: ATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCAT...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACATGGAGAGTCTCCATTaGAAGTCCTCCTGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHMESLH*KSSCFH
Trigger: ATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCAT...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR CAA 72 bp TCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTaGCAACGCAAACACTTAGTATCCCACTGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: SGSLLRSPERQY*QRKHLVSHCVK
Trigger: CTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTATTTCCAGGCTCATGTaGTTAAAAATCCACTGGACA +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSISRLM*LKIHWT
Trigger: TGTCCAGTGGATTTTTAATCACATGAGCCTGGAAAT...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAACTCTTGGCCACTGGGTaGAATCCAAGCTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKLLATG*NPSWVV
Trigger: AACTACCCAGCTTGGATTTCACCCAGTGGCCAAGAG...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTTCCAGCAGAGGATATaGTATGAATTCTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIFQQRI*YEFFRV
Trigger: AACCCTGAAGAATTCATATCATATCCTCTGCTGGAA...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAATAAAGAAAACGATCTaGAGCGAATCCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTIKKTI*SESFHS
Trigger: ACTGTGAAAGGATTCGCTTCAGATCGTTTTCTTTAT...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGATAAAGAAAACGATCTaGAGCGAATCCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILIKKTI*SESFHS
Trigger: ACTGTGAAAGGATTCGCTTCAGATCGTTTTCTTTAT...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAACATAGACCCTGCTTTTaGTACAGGGGCAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKHRPCF*YRGSCT
Trigger: TGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATG...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTAGTGGTAGAAAATGCTaGATAATTGTCCGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSSGRKC*IIVREC
Trigger: ACACTCACGGACAATTATTCAGCATTTTCTACCACT...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACGGTCACGGGTCTGCATaGATCTTTGAAAAATCCAAC +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHGHGSA*IFEKSN
Trigger: GTTGGATTTTTCAAAGATTCATGCAGACCCGTGACC...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613945.3
CDS-3UTR GCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAATTCTCCAGGGTGAGCTaGTCCAAGCTAAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKFSRVS*SKLRSP
Trigger: TGGGCTTCTTAGCTTGGAGCAGCTCACCCTGGAGAA...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAACGAACCTTGAAAGCTaGATTCTGTTTTTCTCACTT +
Preference number: 4 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTTNLES*ILFFSL
Trigger: AAGTGAGAAAAACAGAATGCAGCTTTCAAGGTTCGT...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS-3UTR GCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCGTCCCACAAGCCAACTaGTTGAAACGAACCTTGAAA +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSVPQAN*LKRTLK
Trigger: TTTCAAGGTTCGTTTCAAGCAGTTGGCTTGTGGGAC...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS-3UTR CCA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGTCTAGGTGTTTCAGGTaGAACAATCTTTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILSRCFR*NNLLKA
Trigger: TGCCTTTAAAAGATTGTTCCACCTGAAACACCTAGA...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCGAAAGGGCAGTGCTATaGAAATCCTTGAAAGACCTC +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISERAVL*KSLKDL
Trigger: GAGGTCTTTCAAGGATTTCCATAGCACTGCCCTTTC...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
3UTR CAA 72 bp AACAGAGTTGAGCAGTTTTGCCTTGGGTCCTGTTTCTaGGCATCCTACATCAGACAAACACATCTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: NRVEQFCLGSCF*ASYIRQTHLSK
Trigger: TTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCTCAACTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCACTCACTTACCAGTTTaGATTGTTGGGCTCTTCATG +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSTHLPV*IVGLFM
Trigger: CATGAAGAGCCCAACAATTCAAACTGGTAAGTGAGT...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR TCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTATAAAGAAAACGATCTaGAGCGAATCCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSIKKTI*SESFHS
Trigger: ACTGTGAAAGGATTCGCTTCAGATCGTTTTCTTTAT...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCAAATCATTTTCATGTTaGACCTCCTGGGTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSKSFSC*TSWVQL
Trigger: TAGCTGGACCCAGGAGGTTCAACATGAAAATGATTT...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCGTAGGTAACGGAAGGTaGAATCACACTTGGATCTAT +
Preference number: 4 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSVGNGR*NHTWIY
Trigger: ATAGATCCAAGTGTGATTTCACCTTCCGTTACCTAC...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTCATCTACTAGCAGATaGTGCAACTTCTTTTCACGG +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHSSTSR*CNFFSR
Trigger: CCGTGAAAAGAAGTTGCAGCATCTGCTAGTAGATGA...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTTCTAGGTGTTTCAGGTaGAACAATCTTTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSSRCFR*NNLLKA
Trigger: TGCCTTTAAAAGATTGTTCCACCTGAAACACCTAGA...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAAGGGGCAGCTGCACATaGCTGCCTCTTAATCTAGTA +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKRGSCT*LPLNLV
Trigger: TACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACATTTCCAGGCTCATGTaGTTAAAAATCCACTGGACA +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHISRLM*LKIHWT
Trigger: TGTCCAGTGGATTTTTAATCACATGAGCCTGGAAAT...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAAAAGAGACAGTAATGTaGGGGGTGGGCCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKKETVM*GVGLQI
Trigger: GATTTGAAGGCCCACCCCTCACATTACTGTCTCTTT...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCACTGATTACCCACATTaGCAAAGAGACAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: GPVSWHPTSDKHISQNISTDYPH*QRDSNV
Trigger: CACATTACTGTCTCTTTGTCAATGTGGGTAATCAGT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR TCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACAGTGGTAGAAAATGCTaGATAATTGTCCGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHSGRKC*IIVREC
Trigger: ACACTCACGGACAATTATTCAGCATTTTCTACCACT...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACAAGTATTGGCATTGGTaGCATTGGAAATGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHKYWHW*HWKWCH
Trigger: ATGACACCATTTCCAATGGCACCAATGCCAATACTT...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR GCA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAATCAATGCTGTTTTTGTaGTTGCCTTTCCCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKSMLFL*LPFPRL
Trigger: GAGCCGAGGGAAAGGCAAGCACAAAAACAGCATTGA...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS GCA 90 bp CGGATGGTGTCTGGGCCAGCACACATAGGTTGCTGGCCACCAAACTaGAGGGTGGGCTGTCGCTGCAAGATCCAGAGAAGGCGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: RMVSGPAHIGCWPPN*RVGCRCKIQRRRQS
Trigger: TGACTGCCGCCTTCTCTGGATCTTGCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGCCCAGACACCATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 90 bp GGGCAGAGCACTCACAGCGAGCGGGGCAGCCAATGGTGGATCCCATaGAGATTAACACCACAGCCAGACCCAGGAATGGCTGCCAGCATG +
Preference number: 5 (lower is better)
Translates to: GQSTHSERGSQWWIP*RLTPQPDPGMAASM
Trigger: CATGCTGGCAGCCATTCCTGGGTCTGGCTGTGGTGTTAATCTTCATGGGATCCACCATTGGCTGCCCCGCTCGCTGTGAGTGCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS GCA 90 bp GCACGCGTAGGAAGCGGAGCCCTTGGAAGGAGTGAGGCTCAATGGTaGGAAGCTGGGCCCCCACTATATGAAGCTCCTGAAGGCGGATCA +
Preference number: 5 (lower is better)
Translates to: ARVGSGALGRSEAQW*EAGPPLYEAPEGGS
Trigger: TGATCCGCCTTCAGGAGCTTCATATAGTGGGGGCCCAGCTTCGCACCATTGAGCCTCACTCCTTCCAAGGGCTCCGCTTCCTACGCGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS GCA 90 bp TTGAAAGACCTCTCACGGATGGTGTCTGGGCCAGCACACATAGGTTaGTGGCCACCAAACTGCAGGGTGGGCTGTCGCTGCAAGATCCAG +
Preference number: 5 (lower is better)
Translates to: LKDLSRMVSGPAHIG*WPPNCRVGCRCKIQ
Trigger: CTGGATCTTGCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGCCCAGACACCATCCGTGAGAGGTCTTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS GCA 90 bp GTGGTGATGAAACGCCTTCGGGGTGTCACCCAGGAAATCACAGGCTaGGGGTCTCCATCTGCACTGCATTCTAGCTGGACTGTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: VVMKRLRGVTQEITG*GSPSALHSSWTVCP
Trigger: AGGGCAGACAGTCCAGCTAGAATGCAGTGCAGATGGAGACCCGCAGCCTGTGATTTCCTGGGTGACACCCCGAAGGCGTTTCATCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 90 bp AAAGACCTCTCACGGATGGTGTCTGGGCCAGCACACATAGGTTGCTaGCCACCAAACTGCAGGGTGGGCTGTCGCTGCAAGATCCAGAGA +
Preference number: 5 (lower is better)
Translates to: KDLSRMVSGPAHIGC*PPNCRVGCRCKIQR
Trigger: TCTCTGGATCTTGCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGCCCAGACACCATCCGTGAGAGGTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 90 bp GGCAGTGCTATGGAAATCCTTGAAAGACCTCTCACGGATGGTGTCTaGGCCAGCACACATAGGTTGCTGGCCACCAAACTGCAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GSAMEILERPLTDGV*ASTHRLLATKLQGG
Trigger: CCCACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGCCCAGACACCATCCGTGAGAGGTCTTTCAAGGATTTCCATAGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCATGCTGTTTTTGTGCTaGCCTTTCCCTCGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: TCLPACLSMESLHWKSSCMLFLC*PFPRLH
Trigger: GTGGAGCCGAGGGAAAGGCAAGCACAAAAACAGCAT...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 90 bp ACCACAGCCAGACCCAGGAATGGCTGCCAGCATGATATGGCCGTGTaGAGCATGACTCCACTTCTTAGTCTACACCTTGGTCACGGGTCT +
Preference number: 5 (lower is better)
Translates to: TTARPRNGCQHDMAV*SMTPLLSLHLGHGS
Trigger: AGACCCGTGACCAAGGTGTAGACTAAGAAGTGGAGTCATGCTTCACACGGCCATATCATGCTGGCAGCCATTCCTGGGTCTGGCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 90 bp GTTTCGATGGGAATGCCCTCTGGGATGGCGATCAATCGCCTTCTGTaGCAGCTAACAGATTTGTTCTGGGCAGAGCACTCACAGCGAGCG +
Preference number: 5 (lower is better)
Translates to: VSMGMPSGMAINRLL*QLTDLFWAEHSQRA
Trigger: CGCTCGCTGTGAGTGCTCTGCCCAGAACAAATCTGTTAGCTGTCACAGAAGGCGATTGATCGCCATCCCAGAGGGCATTCCCATCGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCGCTCTTCCATTGGACTaGGTGGTGATGAAACGCCTT +
Preference number: 5 (lower is better)
Translates to: TCLPACLSMESLHWKSSCALPLD*VVMKRL
Trigger: AAGGCGTTTCATCACCACCAAGTCCAATGGAAGAGC...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGATGGAGAGTCTCCATaGGAAGTCCTCCTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGDGESP*EVLLLP
Trigger: TGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 90 bp TTCCCAGCAGCATTGCTAGCGATGCAAACATACATCCCGCTGTCTTaGTCCTGGGCAAAGCGGATTTCCAAGGTGCCATCACCCAACACG +
Preference number: 5 (lower is better)
Translates to: FPAALLAMQTYIPLS*SWAKRISKVPSPNT
Trigger: CGTGTTGGGTGATGGCACCTTGGAAATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTATGTTTGCATCGCTAGCAATGCTGCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 90 bp CCAGACCCAGGAATGGCTGCCAGCATGATATGGCCGTGTGAAGCATaGCTCCACTTCTTAGTCTACACCTTGGTCACGGGTCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: PDPGMAASMIWPCEA*LHFLVYTLVTGLHE
Trigger: TTCATGCAGACCCGTGACCAAGGTGTAGACTAAGAAGTGGAGTCATGCTTCACACGGCCATATCATGCTGGCAGCCATTCCTGGGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613945.3
CDS-3UTR CAA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAGGGAGAGGGCTTCTGTaGGTACTGCTGTTAAGTTGC +
Preference number: 5 (lower is better)
Translates to: PACLSMESLHWKSSCFHRGRGLL*VLLLSC
Trigger: GCAACTTAACAGCAGTACCAACAGAAGCCCTCTCCC...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCGTAGACAGATTGGTGTaGGTGACTGAAAGGGATGTG +
Preference number: 5 (lower is better)
Translates to: TCLPACLSMESLHWKSSCVDRLV*VTERDV
Trigger: CACATCCCTTTCAGTCACCAACACCAATCTGTCTAC...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTGGCATTGGTGCCATaGGAAATGGTGTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: TCLPACLSMESLHWKSSCLALVP*EMVSLE
Trigger: CTCCAATGACACCATTTCCAATGGCACCAATGCCAA...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 90 bp CCAGACCCAGGAATGGCTGCCAGCATGATATGGCCGTGTGAAGCATaGCTCCACTTCTTAGTCTACACCTTGGTCACGGGTCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: PDPGMAASMIWPCEA*LHFLVYTLVTGLAF
Trigger: AAAAGCAAGACCCGTGACCAAGGTGTAGACTAAGAAGTGGAGTCATGCTTCACACGGCCATATCATGCTGGCAGCCATTCCTGGGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000379992.6
CDS-3UTR CAA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCCCACAAGCCAACTGCTaGAAACGAACCTGCAACAAA +
Preference number: 5 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGPQANC*KRTCNK
Trigger: TTTGTTGCAGGTTCGTTTCAAGCAGTTGGCTTGTGG...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR CAA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACTGAGGTCCAAGATTTaGGTTTCGATGGGAATGCCC +
Preference number: 5 (lower is better)
Translates to: PACLSMESLHWKSSCFHRLRSKI*VSMGMP
Trigger: GGGCATTCCCATCGAAACCAAAATCTTGGACCTCAG...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGAGCTCCTGGTTCCACATaGGCAATGATGTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: PACLSMESLHWKSSCFHRAPGST*AMMLSL
Trigger: GAGTGACAACATCATTGCCAATGTGGAACCAGGAGC...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGCCAGCACACATAGGTaGCTGGCCACCAAACTGCAG +
Preference number: 5 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTASTHR*LATKLQ
Trigger: CTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGC...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGTGCTATGGAAATCCTaGAAAGACCTCTCACGGATG +
Preference number: 5 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGVLWKS*KDLSRM
Trigger: CATCCGTGAGAGGTCTTTCAAGGATTTCCATAGCAC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 90 bp AGAAGACATTCTCTTCCAAAGTTTCCAGCAGGTTCTGAGACACATTaGGCACGCGTAGGAAGCGGAGCCCTTGGAAGGAGTGAGGCTCAA +
Preference number: 5 (lower is better)
Translates to: RRHSLPKFPAGSETH*ARVGSGALGRSEAQ
Trigger: TTGAGCCTCACTCCTTCCAAGGGCTCCGCTTCCTACGCGTGCTCAATGTGTCTCAGAACCTGCTGGAAACTTTGGAAGAGAATGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS GCA 90 bp ACAGGCTGCGGGTCTCCATCTGCACTGCATTCTAGCTGGACTGTCTaGCCTTCATCTACTAGCAGATGCTGCAACTTCTTTTCACGGATT +
Preference number: 5 (lower is better)
Translates to: TGCGSPSALHSSWTV*PSSTSRCCNFFSRI
Trigger: AATCCGTGAAAAGAAGTTGCAGCATCTGCTAGTAGATGAAGGGCAGACAGTCCAGCTAGAATGCAGTGCAGATGGAGACCCGCAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCACTGAGGTCCAAGATTTaGGTTTCGATGGGAATGCCC +
Preference number: 5 (lower is better)
Translates to: VSIGSPPASIDPAFDTGALRSKI*VSMGMP
Trigger: GGGCATTCCCATCGAAACCAAAATCTTGGACCTCAG...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCAGGTTAAAGAGATTGTaGAATGCTCCTGGTTCCACA +
Preference number: 5 (lower is better)
Translates to: TCLPACLSMESLHWKSSCRLKRL*NAPGST
Trigger: TGTGGAACCAGGAGCATTCAACAATCTCTTTAACCT...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACGCAGGTTAAAGAGATaGTTGAATGCTCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: PACLSMESLHWKSSCFHRRRLKR*LNAPGS
Trigger: GGAACCAGGAGCATTCAACAATCTCTTTAACCTGCG...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAACCAGCTTTAGACGATaGCCTTTTAGGCGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: VSIGSPPASIDPAFDTGATSFRR*PFRRRE
Trigger: TTCCCTCCGCCTAAAAGGCAATCGTCTAAAGCTGGT...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGGTACTGCTGTTAAGTaGCATTTCTCCAGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAGTAVK*HFSRVS
Trigger: GCTCACCCTGGAGAAATGCAACTTAACAGCAGTACC...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGCCAGCACACATAGGTaGCTGGCCACCAAACTGCAG +
Preference number: 5 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSASTHR*LATKLQ
Trigger: CTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGC...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTCTTCCATTGGACTaGGTGGTGATGAAACGCCTT +
Preference number: 5 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAALPLD*VVMKRL
Trigger: AAGGCGTTTCATCACCACCAAGTCCAATGGAAGAGC...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGATACATCCCGCTGTCTaGATCCTGGGCAAAGCGGAT +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGIHPAV*ILGKAD
Trigger: ATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTAT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTGGAAATGGTGTCATaGGAGTCGGTCATGTACATA +
Preference number: 5 (lower is better)
Translates to: TCLPACLSMESLHWKSSCLEMVS*ESVMYI
Trigger: TATGTACATGACCGACTCCAATGACACCATTTCCAA...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCGAAAAAGTATTGGCATaGGTGCCATTGGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: TCLPACLSMESLHWKSSCEKVLA*VPLEMV
Trigger: CACCATTTCCAATGGCACCAATGCCAATACTTTTTC...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGATGCTGTTTTTGTGCTaGCCTTTCCCTCGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGMLFLC*PFPRLH
Trigger: GTGGAGCCGAGGGAAAGGCAAGCACAAAAACAGCAT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGATTGAGCAGTTTTGCCTaGGGTCCTGTTTCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: PACLSMESLHWKSSCFHRLSSFA*GPVSWH
Trigger: ATGCCAAGAAACAGGACCCAAGGCAAAACTGCTCAA...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 90 bp AATCCAACCCTTGCCGTCTCCCACACAAAGCTCTTGGCCACTGGGTaGAATCCAAGCTGGGTAGTTGATCATGATAATTCCCGCATGTCA +
Preference number: 5 (lower is better)
Translates to: NPTLAVSHTKLLATG*NPSWVVDHDNSRMS
Trigger: TGACATGCGGGAATTATCATGATCAACTACCCAGCTTGGATTTCACCCAGTGGCCAAGAGCTTTGTGTGGGAGACGGCAAGGGTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000493941.1
ENST00000613945.3
CDS GCA 90 bp CGCATGTCATGGGCAGCAGCATCTCTCAGAGTCCCACAAGCCAACTaGTTGAAACGAACCTGCAACAAACAAGATGAGACTCACTTACCA +
Preference number: 5 (lower is better)
Translates to: RMSWAAASLRVPQAN*LKRTCNKQDETHLP
Trigger: TGGTAAGTGAGTCTCATCTTGTTTGTTGCAGGTTCGTTTCAAGCAGTTGGCTTGTGGGACTCTGAGAGATGCTGCTGCCCATGACATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR CAA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCACATTGGCAATGATGTaGTCACTCAAGTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: TCLPACLSMESLHWKSSCTLAMM*SLKSIS
Trigger: AGAGATAGACTTGAGTGACAACATCATTGCCAATGT...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCAGGTTAAAGAGATTGTaGAATGCTCCTGGTTCCACA +
Preference number: 5 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGRLKRL*NAPGST
Trigger: TGTGGAACCAGGAGCATTCAACAATCTCTTTAACCT...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGAGAGGGCTTCTGTaGGTACTGCTGTTAAGTTGC +
Preference number: 5 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTGRGLL*VLLLSC
Trigger: GCAACTTAACAGCAGTACCAACAGAAGCCCTCTCCC...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp ACATGCCTGCCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCGCATACACAGGCATATaGTTGATATTGAGATGCTTC +
Preference number: 5 (lower is better)
Translates to: TCLPACLSMESLHWKSSCAYTGI*LILRCF
Trigger: GAAGCATCTCAATATCAACAATATGCCTGTGTATGC...GCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGGCAGGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCAGGCCAGAGGGTTGTaGTTAATGCTCAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGQARGL*LMLKTS
Trigger: GGAGGTCTTGAGCATTAACAACAACCCTCTGGCCTG...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCATCATTCCCAGCAGCATaGCTAGCGATGCAAACATAC +
Preference number: 5 (lower is better)
Translates to: VSIGSPPASIDPAFDTGASFPAA*LAMQTY
Trigger: GTATGTTTGCATCGCTAGCAATGCTGCTGGGAATGA...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGAAAAAGTATTGGCATaGGTGCCATTGGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGEKVLA*VPLEMV
Trigger: CACCATTTCCAATGGCACCAATGCCAATACTTTTTC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAATGCTGTTTTTGTGCTaGCCTTTCCCTCGGCTCCAC +
Preference number: 5 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTMLFLC*PFPRLH
Trigger: GTGGAGCCGAGGGAAAGGCAAGCACAAAAACAGCAT...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGATGGAGAGTCTCCATaGGAAGTCCTCCTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTDGESP*EVLLLP
Trigger: TGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATC...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCACTTGGGTCCTGTTTCTaGGCATCCTACATCAGACAA +
Preference number: 5 (lower is better)
Translates to: VSIGSPPASIDPAFDTGALGSCF*ASYIRQ
Trigger: TTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAG...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCACCACAAGCCAACTGCTaGAAACGAACCTTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAPQANC*KRTLKA
Trigger: AGCTTTCAAGGTTCGTTTCAAGCAGTTGGCTTGTGG...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS GCA 90 bp TTAAAGGCATACACAGGCATATTGTTGATATTGAGATGCTTCAGATaGAGGCTGATGAGGCTGCGGAGGTGGGAGAGGGCTTCTGTTGGT +
Preference number: 5 (lower is better)
Translates to: LKAYTGILLILRCFR*RLMRLRRWERASVG
Trigger: ACCAACAGAAGCCCTCTCCCACCTCCGCAGCCTCATCAGCCTGCATCTGAAGCATCTCAATATCAACAATATGCCTGTGTATGCCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS GCA 90 bp CGCATGTCATGGGCAGCAGCATCTCTCAGAGTCCCACAAGCCAACTaGTTGAAACGAACCTTGAAAGCTGCATTCTGTTTTTCTCACTTC +
Preference number: 5 (lower is better)
Translates to: RMSWAAASLRVPQAN*LKRTLKAAFCFSHF
Trigger: GAAGTGAGAAAAACAGAATGCAGCTTTCAAGGTTCGTTTCAAGCAGTTGGCTTGTGGGACTCTGAGAGATGCTGCTGCCCATGACATGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGCGCAGGTTAAAGAGATaGTTGAATGCTCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGRRLKR*LNAPGS
Trigger: GGAACCAGGAGCATTCAACAATCTCTTTAACCTGCG...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGTCAAGCTTAGTGAGATaGGACAGCCCCGTGAATACT +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGSSLVR*DSPVNT
Trigger: AGTATTCACGGGGCTGTCCAATCTCACTAAGCTTGA...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAGCTGCACATGGCGCATACACAGGCATATaGTTGATATTGAGATGCTTC +
Preference number: 5 (lower is better)
Translates to: SPPASIDPAFDTGAAAHGAYTGI*LILRCF
Trigger: GAAGCATCTCAATATCAACAATATGCCTGTGTATGC...GCCATGTGCAGCTGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACGCCAGCACACATAGGTaGCTGGCCACCAAACTGCAG +
Preference number: 5 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHASTHR*LATKLQ
Trigger: CTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGC...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGTGCTATGGAAATCCTaGAAAGACCTCTCACGGATG +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGVLWKS*KDLSRM
Trigger: CATCCGTGAGAGGTCTTTCAAGGATTTCCATAGCAC...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAACGGTGGCTCTTCCATaGGACTTGGTGGTGATGAAA +
Preference number: 5 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTTVALP*DLVVMK
Trigger: TTTCATCACCACCAAGTCCAATGGAAGAGCCACCGT...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGACGGTGGCTCTTCCATaGGACTTGGTGGTGATGAAA +
Preference number: 5 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGTVALP*DLVVMK
Trigger: TTTCATCACCACCAAGTCCAATGGAAGAGCCACCGT...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTATACATCCCGCTGTCTaGATCCTGGGCAAAGCGGAT +
Preference number: 5 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSIHPAV*ILGKAD
Trigger: ATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTAT...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGTCATTCCCAGCAGCATaGCTAGCGATGCAAACATAC +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGSFPAA*LAMQTY
Trigger: GTATGTTTGCATCGCTAGCAATGCTGCTGGGAATGA...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCGATGGAGAGTCTCCATaGGAAGTCCTCCTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIDGESP*EVLLLP
Trigger: TGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATC...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp CCTGCCTGCCTTTCGATGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCAGAACGCCAATATTaGCAACGCAAACACTTAGTA +
Preference number: 5 (lower is better)
Translates to: PACLSMESLHWKSSCFHRPERQY*QRKHLV
Trigger: TACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGG...TCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCATCGAAAGGCAGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGTTCTTAGTCTACACCTaGGTCACGGGTCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGFLVYT*VTGLHE
Trigger: TTCATGCAGACCCGTGACCAAGGTGTAGACTAAGAA...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613945.3
CDS TCA 90 bp TTTAAAGGCAAGGAAGGGTACAGTAGACAGATTGGTGTTGGTGACTaGAAGGGATGTGAGGTTGAGACCGTAGAGGCTATTGGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: FKGKEGYSRQIGVGD*KGCEVETVEAIGRH
Trigger: ATGCCTGCCAATAGCCTCTACGGTCTCAACCTCACATCCCTTTCAGTCACCAACACCAATCTGTCTACTGTACCCTTCCTTGCCTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGACTTACCAGTTTGAATaGTTGGGCTCTTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGTYQFE*LGSSCW
Trigger: CCAGCATGAAGAGCCCAACAATTCAAACTGGTAAGT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR CAA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCGCTCCTGGTTCCACATaGGCAATGATGTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIAPGST*AMMLSL
Trigger: GAGTGACAACATCATTGCCAATGTGGAACCAGGAGC...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCGGTACTGCTGTTAAGTaGCATTTCTCCAGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIGTAVK*HFSRVS
Trigger: GCTCACCCTGGAGAAATGCAACTTAACAGCAGTACC...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGTAGACAGATTGGTGTaGGTGACTGAAAGGGATGTG +
Preference number: 5 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTVDRLV*VTERDV
Trigger: CACATCCCTTTCAGTCACCAACACCAATCTGTCTAC...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGTACAGTAGACAGATaGGTGTTGGTGACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTGTVDR*VLVTER
Trigger: CCTTTCAGTCACCAACACCAATCTGTCTACTGTACC...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGCTTGGGTCCTGTTTCTaGGCATCCTACATCAGACAA +
Preference number: 5 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILLGSCF*ASYIRQ
Trigger: TTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAG...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 90 bp TTGAAAGCTGCATTCTGTTTTTCTCACTTCACCAGTTTGAATTGTTaGGCTCTTCATGCTGGTAGTGGCCACTTTCGGTGCTCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: LKAAFCFSHFTSLNC*ALHAGSGHFRCSAL
Trigger: CAGAGCAGAGCACCGAAAGTGGCCACTACCAGCATGAAGAGCCCAACAATTCAAACTGGTGAAGTGAGAAAAACAGAATGCAGCTTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS-3UTR CAA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGACTTACCAGTTTGAATaGTTGGGCTCTTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILTYQFE*LGSSCW
Trigger: CCAGCATGAAGAGCCCAACAATTCAAACTGGTAAGT...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR CAA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTACGGGTCTTGCTTTTTaGCATGTGGCCAAAAGGGTT +
Preference number: 5 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSTGLAF*HVAKRV
Trigger: AACCCTTTTGGCCACATGCAAAAAAGCAAGACCCGT...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000379992.6
CDS-3UTR CAA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGTTCTTAGTCTACACCTaGGTCACGGGTCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGFLVYT*VTGLAF
Trigger: AAAAGCAAGACCCGTGACCAAGGTGTAGACTAAGAA...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000379992.6
CDS-3UTR CAA 90 bp TGGAGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACATTCTTAGTCTACACCTaGGTCACGGGTCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: WRVSIGSPPASIDPAFDTFLVYT*VTGLAF
Trigger: AAAAGCAAGACCCGTGACCAAGGTGTAGACTAAGAA...TGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000379992.6
CDS-3UTR CAA 90 bp GTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGGCAATGAATTCTTCAGGGTaGACGCTTTTTAGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: VSIGSPPASIDPAFDTGAMNSSG*TLFSLF
Trigger: AAACAGGCTAAAAAGCGTCAACCCTGAAGAATTCAT...TGCCCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCCGCAGGTTAAAGAGATaGTTGAATGCTCCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIRRLKR*LNAPGS
Trigger: GGAACCAGGAGCATTCAACAATCTCTTTAACCTGCG...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCGGGAGAGGGCTTCTGTaGGTACTGCTGTTAAGTTGC +
Preference number: 5 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSGRGLL*VLLLSC
Trigger: GCAACTTAACAGCAGTACCAACAGAAGCCCTCTCCC...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCGTAGACAGATTGGTGTaGGTGACTGAAAGGGATGTG +
Preference number: 5 (lower is better)
Translates to: SSFALGPVSWHPTSDKHIVDRLV*VTERDV
Trigger: CACATCCCTTTCAGTCACCAACACCAATCTGTCTAC...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCCAGGCCAGAGGGTTGTaGTTAATGCTCAAGACCTCC +
Preference number: 5 (lower is better)
Translates to: GPVSWHPTSDKHISQNISQARGL*LMLKTS
Trigger: GGAGGTCTTGAGCATTAACAACAACCCTCTGGCCTG...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTTTGGCATTGGTGCCATaGGAAATGGTGTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSLALVP*EMVSLE
Trigger: CTCCAATGACACCATTTCCAATGGCACCAATGCCAA...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCCTTGGGTCCTGTTTCTaGGCATCCTACATCAGACAA +
Preference number: 5 (lower is better)
Translates to: SSFALGPVSWHPTSDKHILGSCF*ASYIRQ
Trigger: TTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAG...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTTGAGCAGTTTTGCCTaGGGTCCTGTTTCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: SSFALGPVSWHPTSDKHILSSFA*GPVSWH
Trigger: ATGCCAAGAAACAGGACCCAAGGCAAAACTGCTCAA...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGTCCTGGTTTACTCTTTaGAAAAATCCAACCCTTGCC +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGSWFTL*KNPTLA
Trigger: GGCAAGGGTTGGATTTTTCAAAAGAGTAAACCAGGA...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS CCA 90 bp GTTTTTACTGAGGTCCAAGATTTTGGTTTCGATGGGAATGCCCTCTaGGATGGCGATCAATCGCCTTCTGTGACAGCTAACAGATTTGTT +
Preference number: 5 (lower is better)
Translates to: VFTEVQDFGFDGNAL*DGDQSPSVTANRFV
Trigger: AACAAATCTGTTAGCTGTCACAGAAGGCGATTGATCGCCATCCCAGAGGGCATTCCCATCGAAACCAAAATCTTGGACCTCAGTAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGATGAATTCTTCAGGGTaGACGCTTTTTAGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGMNSSG*TLFSLF
Trigger: AAACAGGCTAAAAAGCGTCAACCCTGAAGAATTCAT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGAGTCTCCATTGGAAGTCCTCCTGCTTCCATAGACCCTGCTTTTGATACAGGGACATTGGCAATGATGTaGTCACTCAAGTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: RVSIGSPPASIDPAFDTGTLAMM*SLKSIS
Trigger: AGAGATAGACTTGAGTGACAACATCATTGCCAATGT...CCCTGTATCAAAAGCAGGGTCTATGGAAGCAGGAGGACTTCCAATGGAGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCACCAGCTTTAGACGATaGCCTTTTAGGCGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: GPVSWHPTSDKHISQNISTSFRR*PFRRRE
Trigger: TTCCCTCCGCCTAAAAGGCAATCGTCTAAAGCTGGT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACACGGTGGCTCTTCCATaGGACTTGGTGGTGATGAAA +
Preference number: 5 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHTVALP*DLVVMK
Trigger: TTTCATCACCACCAAGTCCAATGGAAGAGCCACCGT...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGCAGTTTTGCCTTGGGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCCAGGGAAAAAGTATaGGCATTGGTGCCATTGGAA +
Preference number: 5 (lower is better)
Translates to: SSFALGPVSWHPTSDKHISREKV*ALVPLE
Trigger: TTCCAATGGCACCAATGCCAATACTTTTTCCCTGGA...GATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACCCAAGGCAAAACTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp CCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCCAGAACGCCAATATTaGCAACGCAAACACTTAGTA +
Preference number: 5 (lower is better)
Translates to: PRTPIFATQTLSIPLCEGPERQY*QRKHLV
Trigger: TACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGG...CCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGGTCTGCATGAATCTTaGAAAAATCCAACCCTTGCC +
Preference number: 5 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSGLHES*KNPTLA
Trigger: GGCAAGGGTTGGATTTTTCAAAGATTCATGCAGACC...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613945.3
CDS TCA 90 bp TTAATGGGAGGAGGCCATGAAGAGAACAGAAAAGGCTTGACGTTCTaGAGTGAAAACGGTGTTAGTCGTTGGATGACAGCAAATGGGATA +
Preference number: 5 (lower is better)
Translates to: LMGGGHEENRKGLTF*SENGVSRWMTANGI
Trigger: TATCCCATTTGCTGTCATCCAACGACTAACACCGTTTTCACTTCAGAACGTCAAGCCTTTTCTGTTCTCTTCATGGCCTCCTCCCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493941.1
CDS-3UTR CAA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGACTCACTTACCAGTTaGAATTGTTGGGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSDSLTS*NCWALH
Trigger: ATGAAGAGCCCAACAATTCAAACTGGTAAGTGAGTC...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR CAA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCACGGGTCTTGCTTTTTaGCATGTGGCCAAAAGGGTT +
Preference number: 5 (lower is better)
Translates to: GPVSWHPTSDKHISQNISTGLAF*HVAKRV
Trigger: AACCCTTTTGGCCACATGCAAAAAAGCAAGACCCGT...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000379992.6
CDS-3UTR CAA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGATGAATTCTTCAGGGTaGACGCTTTTTAGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILMNSSG*TLFSLF
Trigger: AAACAGGCTAAAAAGCGTCAACCCTGAAGAATTCAT...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTCAAGCTTAGTGAGATaGGACAGCCCCGTGAATACT +
Preference number: 5 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHSSLVR*DSPVNT
Trigger: AGTATTCACGGGGCTGTCCAATCTCACTAAGCTTGA...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCGGTACAGTAGACAGATaGGTGTTGGTGACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: GPVSWHPTSDKHISQNISGTVDR*VLVTER
Trigger: CCTTTCAGTCACCAACACCAATCTGTCTACTGTACC...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACGGTACAGTAGACAGATaGGTGTTGGTGACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHGTVDR*VLVTER
Trigger: CCTTTCAGTCACCAACACCAATCTGTCTACTGTACC...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCGTGCTATGGAAATCCTaGAAAGACCTCTCACGGATG +
Preference number: 5 (lower is better)
Translates to: GPVSWHPTSDKHISQNISVLWKS*KDLSRM
Trigger: CATCCGTGAGAGGTCTTTCAAGGATTTCCATAGCAC...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCTCATTCCCAGCAGCATaGCTAGCGATGCAAACATAC +
Preference number: 5 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSSFPAA*LAMQTY
Trigger: GTATGTTTGCATCGCTAGCAATGCTGCTGGGAATGA...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTTTGGAAATGGTGTCATaGGAGTCGGTCATGTACATA +
Preference number: 5 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSLEMVS*ESVMYI
Trigger: TATGTACATGACCGACTCCAATGACACCATTTCCAA...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGAAAAAGTATTGGCATaGGTGCCATTGGAAATGGTG +
Preference number: 5 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSEKVLA*VPLEMV
Trigger: CACCATTTCCAATGGCACCAATGCCAATACTTTTTC...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 90 bp CATACTGTCTTACTGATTACCCACATTGACAAAGAGACAGTAATGTaGGGGGTGGGCCTTCAAATCATTTTCATGTTGAACCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: HTVLLITHIDKETVM*GVGLQIIFMLNLLG
Trigger: ACCCAGGAGGTTCAACATGAAAATGATTTGAAGGCCCACCCCTCACATTACTGTCTCTTTGTCAATGTGGGTAATCAGTAAGACAGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp AGGGGCAGCTGCACATGGCTGCCTCTTAATCTAGTAATTTACTGTGCCATACTGTACACAGGCATATTGTaGATATTGAGATGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: RGSCTWLPLNLVIYCAILYTGIL*ILRCFR
Trigger: TCTGAAGCATCTCAATATCAACAATATGCCTGTGTA...CAGTATGGCACAGTAAATTACTAGATTAAGAGGCAGCCATGTGCAGCTGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GAACGCCAATATTTGCAACGCAAACACTTAGTATCCCACTGTGTGAAGGGCTCTGCATACACAGGCATATaGTTGATATTGAGATGCTTC +
Preference number: 5 (lower is better)
Translates to: ERQYLQRKHLVSHCVKGSAYTGI*LILRCF
Trigger: GAAGCATCTCAATATCAACAATATGCCTGTGTATGC...AGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAATACATCCCGCTGTCTaGATCCTGGGCAAAGCGGAT +
Preference number: 5 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKIHPAV*ILGKAD
Trigger: ATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTAT...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCTCCAGGGAAAAAGTATaGGCATTGGTGCCATTGGAA +
Preference number: 5 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSSREKV*ALVPLE
Trigger: TTCCAATGGCACCAATGCCAATACTTTTTCCCTGGA...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACGACTCACTTACCAGTTaGAATTGTTGGGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHDSLTS*NCWALH
Trigger: ATGAAGAGCCCAACAATTCAAACTGGTAAGTGAGTC...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS-3UTR CAA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAACTGAGGTCCAAGATTTaGGTTTCGATGGGAATGCCC +
Preference number: 5 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKLRSKI*VSMGMP
Trigger: GGGCATTCCCATCGAAACCAAAATCTTGGACCTCAG...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAGCTCCTGGTTCCACATaGGCAATGATGTTGTCACTC +
Preference number: 5 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKAPGST*AMMLSL
Trigger: GAGTGACAACATCATTGCCAATGTGGAACCAGGAGC...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACAGGTTAAAGAGATTGTaGAATGCTCCTGGTTCCACA +
Preference number: 5 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHRLKRL*NAPGST
Trigger: TGTGGAACCAGGAGCATTCAACAATCTCTTTAACCT...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCTTGGAAATGGTGTCATaGGAGTCGGTCATGTACATA +
Preference number: 5 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSLEMVS*ESVMYI
Trigger: TATGTACATGACCGACTCCAATGACACCATTTCCAA...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCCCAGAACGCCAATATTaGCAACGCAAACACTTAGTA +
Preference number: 5 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSPERQY*QRKHLV
Trigger: TACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGG...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GGTCCTGTTTCTTGGCATCCTACATCAGACAAACACATCTCTCAAAATATCTCCTCTCACTTCACCAGTTaGAATTGTTGGGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: GPVSWHPTSDKHISQNISSHFTS*NCWALH
Trigger: ATGAAGAGCCCAACAATTCAAACTGGTGAAGTGAGA...GGAGATATTTTGAGAGATGTGTTTGTCTGATGTAGGATGCCAAGAAACAGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS-3UTR CAA 90 bp TCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTTAGTATCCATCCTGAGAAAATCTTaGAAAAATCCAACCCTTGCC +
Preference number: 5 (lower is better)
Translates to: SLLRSPERQYLQRKHLVSILRKS*KNPTLA
Trigger: GGCAAGGGTTGGATTTTTCAAAGATTTTCTCAGGAT...GGATACTAAGTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308675.5
CDS-3UTR CAA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAATTGGCATTGGTGCCATaGGAAATGGTGTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKLALVP*EMVSLE
Trigger: CTCCAATGACACCATTTCCAATGGCACCAATGCCAA...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAACTTCACCAGTTTGAATaGTTGGGCTCTTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKLHQFE*LGSSCW
Trigger: CCAGCATGAAGAGCCCAACAATTCAAACTGGTGAAG...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS-3UTR CAA 90 bp TATTCAGGTTCATTACTGAGATCCCCAGAACGCCAATATTTGCAACGCAAACACTACACAGGCATATTGTaGATATTGAGATGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: YSGSLLRSPERQYLQRKHYTGIL*ILRCFR
Trigger: TCTGAAGCATCTCAATATCAACAATATGCCTGTGTA...GTGTTTGCGTTGCAAATATTGGCGTTCTGGGGATCTCAGTAATGAACCTGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAATCCAGGGAAAAAGTATaGGCATTGGTGCCATTGGAA +
Preference number: 5 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKSREKV*ALVPLE
Trigger: TTCCAATGGCACCAATGCCAATACTTTTTCCCTGGA...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAAACATTGGCAATGATGTaGTCACTCAAGTCTATCTCT +
Preference number: 5 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKTLAMM*SLKSIS
Trigger: AGAGATAGACTTGAGTGACAACATCATTGCCAATGT...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS-3UTR CAA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAATGCTTGAAACGAACCTaGAAAGCTGCATTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKCLKRT*KAAFCF
Trigger: AAAACAGAATGCAGCTTTCAAGGTTCGTTTCAAGCA...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS-3UTR CAA 90 bp GATCTCTTTGTGGTACTGAACCAACAATATGGTATGATGCAAGGCTTTAACAAATACACAGGCATATTGTaGATATTGAGATGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: DLFVVLNQQYGMMQGFNKYTGIL*ILRCFR
Trigger: TCTGAAGCATCTCAATATCAACAATATGCCTGTGTA...TTTGTTAAAGCCTTGCATCATACCATATTGTTGGTTCAGTACCACAAAGAGATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS GCA 72 bp GGTTGCTGGCCACCAAACTGCAGGGTGGGCTGTCGCTaGAAGATCCAGAGAAGGCGGCAGTCACAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: GCWPPNCRVGCR*KIQRRRQSQAR
Trigger: TCTGGCCTGTGACTGCCGCCTTCTCTGGATCTTGCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS GCA 72 bp CTCTCACGGATGGTGTCTGGGCCAGCACACATAGGTTaGTGGCCACCAAACTGCAGGGTGGGCTGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: LSRMVSGPAHIG*WPPNCRVGCRC
Trigger: GCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGCCCAGACACCATCCGTGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp CCTCTCACGGATGGTGTCTGGGCCAGCACACATAGGTaGCTGGCCACCAAACTGCAGGGTGGGCTGTCGCTG +
Preference number: 6 (lower is better)
Translates to: PLTDGVWASTHR*LATKLQGGLSL
Trigger: CAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGCCCAGACACCATCCGTGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 72 bp TCACGGATGGTGTCTGGGCCAGCACACATAGGTTGCTaGCCACCAAACTGCAGGGTGGGCTGTCGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: SRMVSGPAHIGC*PPNCRVGCRCK
Trigger: CTTGCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGCCCAGACACCATCCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp CTTGAAAGACCTCTCACGGATGGTGTCTGGGCCAGCACACATAGGTaGCTGGCCACCAAACTGCAGGGTGGGCTGTCGCTGCAAGATCCA +
Preference number: 6 (lower is better)
Translates to: LERPLTDGVWASTHR*LATKLQGGLSLQDP
Trigger: TGGATCTTGCAGCGACAGCCCACCCTGCAGTTTGGTGGCCAGCAACCTATGTGTGCTGGCCCAGACACCATCCGTGAGAGGTCTTTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 72 bp GTAGGAAGCGGAGCCCTTGGAAGGAGTGAGGCTCAATaGTGCGAAGCTGGGCCCCCACTATATGAAGCTCCT +
Preference number: 6 (lower is better)
Translates to: VGSGALGRSEAQ*CEAGPPLYEAP
Trigger: AGGAGCTTCATATAGTGGGGGCCCAGCTTCGCACCATTGAGCCTCACTCCTTCCAAGGGCTCCGCTTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp GTGCCATCACCCAACACGGTGGCTCTTCCATTGGACTaGGTGGTGATGAAACGCCTTCGGGGTGTCACCCAG +
Preference number: 6 (lower is better)
Translates to: VPSPNTVALPLD*VVMKRLRGVTQ
Trigger: CTGGGTGACACCCCGAAGGCGTTTCATCACCACCAAGTCCAATGGAAGAGCCACCGTGTTGGGTGATGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp ACTCACAGCGAGCGGGGCAGCCAATGGTGGATCCCATaGAGATTAACACCACAGCCAGACCCAGGAATGGCT +
Preference number: 6 (lower is better)
Translates to: THSERGSQWWIP*RLTPQPDPGMA
Trigger: AGCCATTCCTGGGTCTGGCTGTGGTGTTAATCTTCATGGGATCCACCATTGGCTGCCCCGCTCGCTGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp TCCAAGGTGCCATCACCCAACACGGTGGCTCTTCCATaGGACTTGGTGGTGATGAAACGCCTTCGGGGTGTC +
Preference number: 6 (lower is better)
Translates to: SKVPSPNTVALP*DLVVMKRLRGV
Trigger: GACACCCCGAAGGCGTTTCATCACCACCAAGTCCAATGGAAGAGCCACCGTGTTGGGTGATGGCACCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp AAGCGGATTTCCAAGGTGCCATCACCCAACACGGTGGCTCTTCCATaGGACTTGGTGGTGATGAAACGCCTTCGGGGTGTCACCCAGGAA +
Preference number: 6 (lower is better)
Translates to: KRISKVPSPNTVALP*DLVVMKRLRGVTQE
Trigger: TTCCTGGGTGACACCCCGAAGGCGTTTCATCACCACCAAGTCCAATGGAAGAGCCACCGTGTTGGGTGATGGCACCTTGGAAATCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 72 bp AGATGCTTCAGATGCAGGCTGATGAGGCTGCGGAGGTaGGAGAGGGCTTCTGTTGGTACTGCTGTTAAGTTG +
Preference number: 6 (lower is better)
Translates to: RCFRCRLMRLRR*ERASVGTAVKL
Trigger: CAACTTAACAGCAGTACCAACAGAAGCCCTCTCCCACCTCCGCAGCCTCATCAGCCTGCATCTGAAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp ATTTCCAAGGTGCCATCACCCAACACGGTGGCTCTTCCATTGGACTaGGTGGTGATGAAACGCCTTCGGGGTGTCACCCAGGAAATCACA +
Preference number: 6 (lower is better)
Translates to: ISKVPSPNTVALPLD*VVMKRLRGVTQEIT
Trigger: TGTGATTTCCTGGGTGACACCCCGAAGGCGTTTCATCACCACCAAGTCCAATGGAAGAGCCACCGTGTTGGGTGATGGCACCTTGGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp GGAATGGCTGCCAGCATGATATGGCCGTGTGAAGCATaGCTCCACTTCTTAGTCTACACCTTGGTCACGGGT +
Preference number: 6 (lower is better)
Translates to: GMAASMIWPCEA*LHFLVYTLVTG
Trigger: ACCCGTGACCAAGGTGTAGACTAAGAAGTGGAGTCATGCTTCACACGGCCATATCATGCTGGCAGCCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp GGAATGCCCTCTGGGATGGCGATCAATCGCCTTCTGTaGCAGCTAACAGATTTGTTCTGGGCAGAGCACTCA +
Preference number: 6 (lower is better)
Translates to: GMPSGMAINRLL*QLTDLFWAEHS
Trigger: TGAGTGCTCTGCCCAGAACAAATCTGTTAGCTGTCACAGAAGGCGATTGATCGCCATCCCAGAGGGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp TCTCTTCCAAAGTTTCCAGCAGGTTCTGAGACACATTaGGCACGCGTAGGAAGCGGAGCCCTTGGAAGGAGT +
Preference number: 6 (lower is better)
Translates to: SLPKFPAGSETH*ARVGSGALGRS
Trigger: ACTCCTTCCAAGGGCTCCGCTTCCTACGCGTGCTCAATGTGTCTCAGAACCTGCTGGAAACTTTGGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 72 bp ATGGAAATCCTTGAAAGACCTCTCACGGATGGTGTCTaGGCCAGCACACATAGGTTGCTGGCCACCAAACTG +
Preference number: 6 (lower is better)
Translates to: MEILERPLTDGV*ASTHRLLATKL
Trigger: CAGTTTGGTGGCCAGCAACCTATGTGTGCTGGCCCAGACACCATCCGTGAGAGGTCTTTCAAGGATTTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp ATTCCCAGCAGCATTGCTAGCGATGCAAACATACATCCCGCTGTCTaGATCCTGGGCAAAGCGGATTTCCAAGGTGCCATCACCCAACAC +
Preference number: 6 (lower is better)
Translates to: IPSSIASDANIHPAV*ILGKADFQGAITQH
Trigger: GTGTTGGGTGATGGCACCTTGGAAATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTATGTTTGCATCGCTAGCAATGCTGCTGGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp AGACCCAGGAATGGCTGCCAGCATGATATGGCCGTGTaGAGCATGACTCCACTTCTTAGTCTACACCTTGGT +
Preference number: 6 (lower is better)
Translates to: RPRNGCQHDMAV*SMTPLLSLHLG
Trigger: ACCAAGGTGTAGACTAAGAAGTGGAGTCATGCTTCACACGGCCATATCATGCTGGCAGCCATTCCTGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp GCATTGCTAGCGATGCAAACATACATCCCGCTGTCTTaGTCCTGGGCAAAGCGGATTTCCAAGGTGCCATCA +
Preference number: 6 (lower is better)
Translates to: ALLAMQTYIPLS*SWAKRISKVPS
Trigger: TGATGGCACCTTGGAAATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTATGTTTGCATCGCTAGCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 72 bp AGCTGGGTAGTTGATCATGATAATTCCCGCATGTCATaGGCAGCAGCATCTCTCAGAGTCCCACAAGCCAAC +
Preference number: 6 (lower is better)
Translates to: SWVVDHDNSRMS*AAASLRVPQAN
Trigger: GTTGGCTTGTGGGACTCTGAGAGATGCTGCTGCCCATGACATGCGGGAATTATCATGATCAACTACCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 72 bp GAGGTCCAAGATTTTGGTTTCGATGGGAATGCCCTCTaGGATGGCGATCAATCGCCTTCTGTGACAGCTAAC +
Preference number: 6 (lower is better)
Translates to: EVQDFGFDGNAL*DGDQSPSVTAN
Trigger: GTTAGCTGTCACAGAAGGCGATTGATCGCCATCCCAGAGGGCATTCCCATCGAAACCAAAATCTTGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp CCCGTGAATACTCCCAAAGGGACCAGCTTTAGACGATaGCCTTTTAGGCGGAGGGAACGCAGGTTAAAGAGA +
Preference number: 6 (lower is better)
Translates to: PVNTPKGTSFRR*PFRRRERRLKR
Trigger: TCTCTTTAACCTGCGTTCCCTCCGCCTAAAAGGCAATCGTCTAAAGCTGGTCCCTTTGGGAGTATTCACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp AGCATTGCTAGCGATGCAAACATACATCCCGCTGTCTaGATCCTGGGCAAAGCGGATTTCCAAGGTGCCATC +
Preference number: 6 (lower is better)
Translates to: SIASDANIHPAV*ILGKADFQGAI
Trigger: GATGGCACCTTGGAAATCCGCTTTGCCCAGGATCAAGACAGCGGGATGTATGTTTGCATCGCTAGCAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp TTCATGCTGGTAGTGGCCACTTTCGGTGCTCTGCTCTaGGCTTCTTCTCATAACCCTATTTCCAGGCTCATG +
Preference number: 6 (lower is better)
Translates to: FMLVVATFGALL*ASSHNPISRLM
Trigger: CATGAGCCTGGAAATAGGGTTATGAGAAGAAGCTCAGAGCAGAGCACCGAAAGTGGCCACTACCAGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp CTTGCCGTCTCCCACACAAAGCTCTTGGCCACTGGGTaGAATCCAAGCTGGGTAGTTGATCATGATAATTCC +
Preference number: 6 (lower is better)
Translates to: LAVSHTKLLATG*NPSWVVDHDNS
Trigger: GGAATTATCATGATCAACTACCCAGCTTGGATTTCACCCAGTGGCCAAGAGCTTTGTGTGGGAGACGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000493941.1
ENST00000613945.3
CDS GCA 72 bp TGGGCAGCAGCATCTCTCAGAGTCCCACAAGCCAACTaGTTGAAACGAACCTGCAACAAACAAGATGAGACT +
Preference number: 6 (lower is better)
Translates to: WAAASLRVPQAN*LKRTCNKQDET
Trigger: AGTCTCATCTTGTTTGTTGCAGGTTCGTTTCAAGCAGTTGGCTTGTGGGACTCTGAGAGATGCTGCTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS CAA 90 bp TTGGACAGCCCCGTGAATACTCCCAAAGGGACCAGCTTTAGACGATaGCCTTTTAGGCGGAGGGAACGCAGGTTAAAGAGATTGTTGAAT +
Preference number: 6 (lower is better)
Translates to: LDSPVNTPKGTSFRR*PFRRRERRLKRLLN
Trigger: ATTCAACAATCTCTTTAACCTGCGTTCCCTCCGCCTAAAAGGCAATCGTCTAAAGCTGGTCCCTTTGGGAGTATTCACGGGGCTGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS GCA 72 bp TGGGCAGCAGCATCTCTCAGAGTCCCACAAGCCAACTaGTTGAAACGAACCTTGAAAGCTGCATTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: WAAASLRVPQAN*LKRTLKAAFCF
Trigger: AAAACAGAATGCAGCTTTCAAGGTTCGTTTCAAGCAGTTGGCTTGTGGGACTCTGAGAGATGCTGCTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS CAA 90 bp ATGTCATGGGCAGCAGCATCTCTCAGAGTCCCACAAGCCAACTGCTaGAAACGAACCTGCAACAAACAAGATGAGACTCACTTACCAGTT +
Preference number: 6 (lower is better)
Translates to: MSWAAASLRVPQANC*KRTCNKQDETHLPV
Trigger: AACTGGTAAGTGAGTCTCATCTTGTTTGTTGCAGGTTCGTTTCAAGCAGTTGGCTTGTGGGACTCTGAGAGATGCTGCTGCCCATGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS CAA 90 bp TCAGGGTTGACGCTTTTTAGCCTGTTTTTACTGAGGTCCAAGATTTaGGTTTCGATGGGAATGCCCTCTGGGATGGCGATCAATCGCCTT +
Preference number: 6 (lower is better)
Translates to: SGLTLFSLFLLRSKI*VSMGMPSGMAINRL
Trigger: AAGGCGATTGATCGCCATCCCAGAGGGCATTCCCATCGAAACCAAAATCTTGGACCTCAGTAAAAACAGGCTAAAAAGCGTCAACCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp ATGTCATGGGCAGCAGCATCTCTCAGAGTCCCACAAGCCAACTGCTaGAAACGAACCTTGAAAGCTGCATTCTGTTTTTCTCACTTCACC +
Preference number: 6 (lower is better)
Translates to: MSWAAASLRVPQANC*KRTLKAAFCFSHFT
Trigger: GGTGAAGTGAGAAAAACAGAATGCAGCTTTCAAGGTTCGTTTCAAGCAGTTGGCTTGTGGGACTCTGAGAGATGCTGCTGCCCATGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS CAA 90 bp AGACGATTGCCTTTTAGGCGGAGGGAACGCAGGTTAAAGAGATTGTaGAATGCTCCTGGTTCCACATTGGCAATGATGTTGTCACTCAAG +
Preference number: 6 (lower is better)
Translates to: RRLPFRRRERRLKRL*NAPGSTLAMMLSLK
Trigger: CTTGAGTGACAACATCATTGCCAATGTGGAACCAGGAGCATTCAACAATCTCTTTAACCTGCGTTCCCTCCGCCTAAAAGGCAATCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp AAGGAAGGGTACAGTAGACAGATTGGTGTTGGTGACTaGAAGGGATGTGAGGTTGAGACCGTAGAGGCTATT +
Preference number: 6 (lower is better)
Translates to: KEGYSRQIGVGD*KGCEVETVEAI
Trigger: AATAGCCTCTACGGTCTCAACCTCACATCCCTTTCAGTCACCAACACCAATCTGTCTACTGTACCCTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp GGAGGCCATGAAGAGAACAGAAAAGGCTTGACGTTCTaGAGTGAAAACGGTGTTAGTCGTTGGATGACAGCA +
Preference number: 6 (lower is better)
Translates to: GGHEENRKGLTF*SENGVSRWMTA
Trigger: TGCTGTCATCCAACGACTAACACCGTTTTCACTTCAGAACGTCAAGCCTTTTCTGTTCTCTTCATGGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493941.1
CDS GCA 72 bp TTAAAGGCATACACAGGCATATTGTTGATATTGAGATaGTTCAGATGCAGGCTGATGAGGCTGCGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LKAYTGILLILR*FRCRLMRLRRW
Trigger: CCACCTCCGCAGCCTCATCAGCCTGCATCTGAAGCATCTCAATATCAACAATATGCCTGTGTATGCCTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp CCTTTTAGGCGGAGGGAACGCAGGTTAAAGAGATTGTaGAATGCTCCTGGTTCCACATTGGCAATGATGTTG +
Preference number: 6 (lower is better)
Translates to: PFRRRERRLKRL*NAPGSTLAMML
Trigger: CAACATCATTGCCAATGTGGAACCAGGAGCATTCAACAATCTCTTTAACCTGCGTTCCCTCCGCCTAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp TTGCCTTTTAGGCGGAGGGAACGCAGGTTAAAGAGATaGTTGAATGCTCCTGGTTCCACATTGGCAATGATG +
Preference number: 6 (lower is better)
Translates to: LPFRRRERRLKR*LNAPGSTLAMM
Trigger: CATCATTGCCAATGTGGAACCAGGAGCATTCAACAATCTCTTTAACCTGCGTTCCCTCCGCCTAAAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp AAAGTATTGGCATTGGTGCCATTGGAAATGGTGTCATaGGAGTCGGTCATGTACATAGGGGTCCTGTTCGCA +
Preference number: 6 (lower is better)
Translates to: KVLALVPLEMVS*ESVMYIGVLFA
Trigger: TGCGAACAGGACCCCTATGTACATGACCGACTCCAATGACACCATTTCCAATGGCACCAATGCCAATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp AGGGAACGCAGGTTAAAGAGATTGTTGAATGCTCCTGGTTCCACATaGGCAATGATGTTGTCACTCAAGTCTATCTCTTCCAGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: RERRLKRLLNAPGST*AMMLSLKSISSSRG
Trigger: TCCTCTGCTGGAAGAGATAGACTTGAGTGACAACATCATTGCCAATGTGGAACCAGGAGCATTCAACAATCTCTTTAACCTGCGTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp TTTAGACGATTGCCTTTTAGGCGGAGGGAACGCAGGTTAAAGAGATaGTTGAATGCTCCTGGTTCCACATTGGCAATGATGTTGTCACTC +
Preference number: 6 (lower is better)
Translates to: FRRLPFRRRERRLKR*LNAPGSTLAMMLSL
Trigger: GAGTGACAACATCATTGCCAATGTGGAACCAGGAGCATTCAACAATCTCTTTAACCTGCGTTCCCTCCGCCTAAAAGGCAATCGTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp AAACGAACCTTGAAAGCTGCATTCTGTTTTTCTCACTTCACCAGTTaGAATTGTTGGGCTCTTCATGCTGGTAGTGGCCACTTTCGGTGC +
Preference number: 6 (lower is better)
Translates to: KRTLKAAFCFSHFTS*NCWALHAGSGHFRC
Trigger: GCACCGAAAGTGGCCACTACCAGCATGAAGAGCCCAACAATTCAAACTGGTGAAGTGAGAAAAACAGAATGCAGCTTTCAAGGTTCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379992.6
CDS TCA 72 bp ACCTGCAACAAACAAGATGAGACTCACTTACCAGTTTaGATTGTTGGGCTCTTCATGCTGGTAGTGGCCACT +
Preference number: 6 (lower is better)
Translates to: TCNKQDETHLPV*IVGLFMLVVAT
Trigger: AGTGGCCACTACCAGCATGAAGAGCCCAACAATTCAAACTGGTAAGTGAGTCTCATCTTGTTTGTTGCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308675.5
ENST00000613945.3
CDS CCA 72 bp GAGGGAACGCAGGTTAAAGAGATTGTTGAATGCTCCTaGTTCCACATTGGCAATGATGTTGTCACTCAAGTC +
Preference number: 6 (lower is better)
Translates to: EGTQVKEIVECS*FHIGNDVVTQV
Trigger: GACTTGAGTGACAACATCATTGCCAATGTGGAACCAGGAGCATTCAACAATCTCTTTAACCTGCGTTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp AAATCCACTGGACACTTTAGAAGTGCAGGCAGCTCATaGTACAGCTTTCTGATGGCACTCATCAATTCCTAC +
Preference number: 6 (lower is better)
Translates to: KSTGHFRSAGSS*YSFLMALINSY
Trigger: GTAGGAATTGATGAGTGCCATCAGAAAGCTGTATCATGAGCTGCCTGCACTTCTAAAGTGTCCAGTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp TTTACTGTGCCATACTGTCTTACTGATTACCCACATTaGCAAAGAGACAGTAATGTGAGGGGTGGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: FTVPYCLTDYPH*QRDSNVRGGPS
Trigger: TGAAGGCCCACCCCTCACATTACTGTCTCTTTGTCAATGTGGGTAATCAGTAAGACAGTATGGCACAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CCA 72 bp AGTCGTTGGATGACAGCAAATGGGATAGAGTATCTGTaGCAGGAGAAGGTAGCCTGGTTTACTCTTTTGAAA +
Preference number: 6 (lower is better)
Translates to: SRWMTANGIEYL*QEKVAWFTLLK
Trigger: TTTCAAAAGAGTAAACCAGGCTACCTTCTCCTGCCACAGATACTCTATCCCATTTGCTGTCATCCAACGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493941.1
CDS CAA 90 bp ATAGCTGTAGACACCAGTATTGTTTTAAGGTCCAGGGAAAAAGTATaGGCATTGGTGCCATTGGAAATGGTGTCATTGGAGTCGGTCATG +
Preference number: 6 (lower is better)
Translates to: IAVDTSIVLRSREKV*ALVPLEMVSLESVM
Trigger: CATGACCGACTCCAATGACACCATTTCCAATGGCACCAATGCCAATACTTTTTCCCTGGACCTTAAAACAATACTGGTGTCTACAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp TTGTTGAATGCTCCTGGTTCCACATTGGCAATGATGTaGTCACTCAAGTCTATCTCTTCCAGCAGAGGATAT +
Preference number: 6 (lower is better)
Translates to: LLNAPGSTLAMM*SLKSISSSRGY
Trigger: ATATCCTCTGCTGGAAGAGATAGACTTGAGTGACAACATCATTGCCAATGTGGAACCAGGAGCATTCAACAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp AGTATTGTTTTAAGGTCCAGGGAAAAAGTATTGGCATaGGTGCCATTGGAAATGGTGTCATTGGAGTCGGTC +
Preference number: 6 (lower is better)
Translates to: SIVLRSREKVLA*VPLEMVSLESV
Trigger: GACCGACTCCAATGACACCATTTCCAATGGCACCAATGCCAATACTTTTTCCCTGGACCTTAAAACAATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp GACACCAGTATTGTTTTAAGGTCCAGGGAAAAAGTATaGGCATTGGTGCCATTGGAAATGGTGTCATTGGAG +
Preference number: 6 (lower is better)
Translates to: DTSIVLRSREKV*ALVPLEMVSLE
Trigger: CTCCAATGACACCATTTCCAATGGCACCAATGCCAATACTTTTTCCCTGGACCTTAAAACAATACTGGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp GTAGACACCAGTATTGTTTTAAGGTCCAGGGAAAAAGTATTGGCATaGGTGCCATTGGAAATGGTGTCATTGGAGTCGGTCATGTACATA +
Preference number: 6 (lower is better)
Translates to: VDTSIVLRSREKVLA*VPLEMVSLESVMYI
Trigger: TATGTACATGACCGACTCCAATGACACCATTTCCAATGGCACCAATGCCAATACTTTTTCCCTGGACCTTAAAACAATACTGGTGTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp TCTTCCAGCAGAGGATATGATATGAATTCTTCAGGGTaGACGCTTTTTAGCCTGTTTTTACTGAGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: SSSRGYDMNSSG*TLFSLFLLRSK
Trigger: CTTGGACCTCAGTAAAAACAGGCTAAAAAGCGTCAACCCTGAAGAATTCATATCATATCCTCTGCTGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 72 bp AGGTTAAAGAGATTGTTGAATGCTCCTGGTTCCACATaGGCAATGATGTTGTCACTCAAGTCTATCTCTTCC +
Preference number: 6 (lower is better)
Translates to: RLKRLLNAPGST*AMMLSLKSISS
Trigger: GGAAGAGATAGACTTGAGTGACAACATCATTGCCAATGTGGAACCAGGAGCATTCAACAATCTCTTTAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS TCA 72 bp TTACTGATTACCCACATTGACAAAGAGACAGTAATGTaGGGGGTGGGCCTTCAAATCATTTTCATGTTGAAC +
Preference number: 6 (lower is better)
Translates to: LLITHIDKETVM*GVGLQIIFMLN
Trigger: GTTCAACATGAAAATGATTTGAAGGCCCACCCCTCACATTACTGTCTCTTTGTCAATGTGGGTAATCAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3
CDS CAA 90 bp TTAAAGAGATTGTTGAATGCTCCTGGTTCCACATTGGCAATGATGTaGTCACTCAAGTCTATCTCTTCCAGCAGAGGATATGATATGAAT +
Preference number: 6 (lower is better)
Translates to: LKRLLNAPGSTLAMM*SLKSISSSRGYDMN
Trigger: ATTCATATCATATCCTCTGCTGGAAGAGATAGACTTGAGTGACAACATCATTGCCAATGTGGAACCAGGAGCATTCAACAATCTCTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308675.5
ENST00000379992.6
ENST00000613945.3