Pregenerated sensors for LINC02893 (Homo sapiens)
Ensembl gene IDs: ENSG00000269994Ensembl transcript IDs: ENST00000602579.1, ENST00000647820.1, ENST00000669870.1, ENST00000670732.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACAGCAGCGAGGCTGGGGGAGGGGCGCCCGCCATTGCCCAGGCTTaGTTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: DSSEAGGGAPAIAQA*LGKQSSREARTGWS Trigger: GCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGCTGCTGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669870.1 |
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| CDS TCA 90 bp | GGGTCCTACAACCACGGAGTCTCGCTGATTGCTAGCACAGCAGTCTaGGATCAAACTGCAAGACAGCAGCGAGGCTGGGGGAGGGGCGCC | + |
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Preference number: 5 (lower is better) Translates to: GSYNHGVSLIASTAV*DQTARQQRGWGRGA Trigger: GGCGCCCCTCCCCCAGCCTCGCTGCTGTCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGTTGTAGGACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669870.1 |
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| CDS TCA 90 bp | TATCCGGCACCTGGCTCGGAGGGTCCTACAACCACGGAGTCTCGCTaGTTGCTAGCACAGCAGTCTGAGATCAAACTGCAAGACAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: YPAPGSEGPTTTESR*LLAQQSEIKLQDSS Trigger: GCTGCTGTCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGTTGTAGGACCCTCCGAGCCAGGTGCCGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669870.1 |
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| CDS TCA 90 bp | AAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTaGTTTCTGCATTTCCATCTGAGGTACCGGGTTCATCTCACTAGG | + |
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Preference number: 5 (lower is better) Translates to: KLRSTAPSVSDAEDG*FLHFHLRYRVHLTR Trigger: CCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS CCA 90 bp | GGAGCAAAGGCACCAGTTTTCATGCACTGCCCAGTTTACCCATTTTaGCAAATCCTTCCTCCTGGCCTCCTGACTATGACACCACCCAGA | + |
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Preference number: 5 (lower is better) Translates to: GAKAPVFMHCPVYPF*QILPPGLLTMTPPR Trigger: TCTGGGTGGTGTCATAGTCAGGAGGCCAGGAGGAAGGATTTGCCAAAATGGGTAAACTGGGCAGTGCATGAAAACTGGTGCCTTTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS TCA 90 bp | GGCTTTACCATCAGCACTTCTCTTGGTACCTCACTATCAACAGGATaGTGGCCCATAGGAGCAAAGGCACCAGTTTTCATGCACTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GFTISTSLGTSLSTG*WPIGAKAPVFMHCP Trigger: TGGGCAGTGCATGAAAACTGGTGCCTTTGCTCCTATGGGCCATCATCCTGTTGATAGTGAGGTACCAAGAGAAGTGCTGATGGTAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS TCA 90 bp | CCTCAGAGATCCATATGGCTTTCTTGGGGAAAAACTCATTTATCTTaGCCTAAGGCAGAAAGTGAGAAGGAGGCAGTAGCCACCAAGACA | + |
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Preference number: 5 (lower is better) Translates to: PQRSIWLSWGKTHLS*PKAESEKEAVATKT Trigger: TGTCTTGGTGGCTACTGCCTCCTTCTCACTTTCTGCCTTAGGTCAAGATAAATGAGTTTTTCCCCAAGAAAGCCATATGGATCTCTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000602579.1 ENST00000647820.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS TCA 90 bp | TTTCAGAAAAACTCCCAGAAGTTTGATAGAGCTCATGCGTGTCAATaGAACTGTAAAATCCAGTCAAGTCGCCATCCTGGTTGGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: FQKNSQKFDRAHACQ*NCKIQSSRHPGWTP Trigger: TGGAGTCCAACCAGGATGGCGACTTGACTGGATTTTACAGTTTCATTGACACGCATGAGCTCTATCAAACTTCTGGGAGTTTTTCTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647820.1 |
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| CDS TCA 90 bp | TTTCAGAAAAACTCCCAGAAGTTTGATAGAGCTCATGCGTGTCAATaGAACTGTAAAATCCAGTCAAGTCGCCATCCTGGTTGGACTCAT | + |
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Preference number: 5 (lower is better) Translates to: FQKNSQKFDRAHACQ*NCKIQSSRHPGWTH Trigger: ATGAGTCCAACCAGGATGGCGACTTGACTGGATTTTACAGTTTCATTGACACGCATGAGCTCTATCAAACTTCTGGGAGTTTTTCTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS GCA 72 bp | CTAGGGAGTGCCAGACAGTGGGCGCAGGTCAGTGGGTaGGCGCACCGTGCGCGAGCTGAAGCAGGGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LGSARQWAQVSG*AHRARAEAGRG Trigger: GCCTCGCCCTGCTTCAGCTCGCGCACGGTGCGCGCACCCACTGACCTGCGCCCACTGTCTGGCACTCCCTAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS CCA 72 bp | TTAGGTAAACAAAGCAGCCGGGAAGCTCGAACTGGGTaGAGCCCACCACAGCTCAAGGAGGCCTGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LGKQSSREARTG*SPPQLKEACLP Trigger: AGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCGGCTGCTTTGTTTACCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669870.1 |
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| CDS CCA 72 bp | CTGGTTGGACTCATAGAGGGAACGGAGGAGCCAAGATaGCCGAATAAGCTCCGGTCTACAGCTCCCAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LVGLIEGTEEPR*PNKLRSTAPSV Trigger: CACGCTGGGAGCTGTAGACCGGAGCTTATTCGGCCATCTTGGCTCCTCCGTTCCCTCTATGAGTCCAACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS TCA 72 bp | GATGGCCGAATAAGCTCCGGTCTACAGCTCCCAGCGTaGGCGACGCAGAAGACGGGTGATTTCTGCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: DGRISSGLQLPA*ATQKTGDFCIS Trigger: GGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTTATTCGGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS TCA 72 bp | AACCACGGAGTCTCGCTGATTGCTAGCACAGCAGTCTaGGATCAAACTGCAAGACAGCAGCGAGGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: NHGVSLIASTAV*DQTARQQRGWG Trigger: CCCCCAGCCTCGCTGCTGTCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGACTCCGTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669870.1 |
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| CDS TCA 72 bp | GGTCAGGGAGTTCCCTTTCCTAGTCAGAGAAAGGGGTaGCAGACAACACCTGGAAAATCAGGCCACTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: GQGVPFPSQRKG*QTTPGKSGHSH Trigger: GTGGGAGTGGCCTGATTTTCCAGGTGTTGTCTGTCACCCCTTTCTCTGACTAGGAAAGGGAACTCCCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669870.1 |
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| CDS CAA 90 bp | AGGAGCAAAGGCACCAGTTTTCATGCACTGCCCAGTTTACCCATTTaGGCAAATCCTTCCTCCTGGCCTCCTGACTATGACACCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: RSKGTSFHALPSLPI*ANPSSWPPDYDTTQ Trigger: CTGGGTGGTGTCATAGTCAGGAGGCCAGGAGGAAGGATTTGCCAAAATGGGTAAACTGGGCAGTGCATGAAAACTGGTGCCTTTGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS CAA 72 bp | GGCACCAGTTTTCATGCACTGCCCAGTTTACCCATTTaGGCAAATCCTTCCTCCTGGCCTCCTGACTATGAC | + |
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Preference number: 6 (lower is better) Translates to: GTSFHALPSLPI*ANPSSWPPDYD Trigger: GTCATAGTCAGGAGGCCAGGAGGAAGGATTTGCCAAAATGGGTAAACTGGGCAGTGCATGAAAACTGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS GCA 72 bp | TGGCCCATAGGAGCAAAGGCACCAGTTTTCATGCACTaGCCAGTTTACCCATTTTGGCAAATCCTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: WPIGAKAPVFMH*PVYPFWQILPP Trigger: AGGAGGAAGGATTTGCCAAAATGGGTAAACTGGGCAGTGCATGAAAACTGGTGCCTTTGCTCCTATGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS CCA 72 bp | GCACCAGTTTTCATGCACTGCCCAGTTTACCCATTTTaGCAAATCCTTCCTCCTGGCCTCCTGACTATGACA | + |
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Preference number: 6 (lower is better) Translates to: APVFMHCPVYPF*QILPPGLLTMT Trigger: TGTCATAGTCAGGAGGCCAGGAGGAAGGATTTGCCAAAATGGGTAAACTGGGCAGTGCATGAAAACTGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS TCA 72 bp | GCAGTAGCCACCAAGACAGAAGAAAACTTAAGCATTTaGAGAGGGAAATTCAATGGGCTCCAGGTGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: AVATKTEENLSI*RGKFNGLQVPS Trigger: GGAAGGCACCTGGAGCCCATTGAATTTCCCTCTTCAAATGCTTAAGTTTTCTTCTGTCTTGGTGGCTACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000602579.1 ENST00000647820.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS TCA 72 bp | ATCAGCACTTCTCTTGGTACCTCACTATCAACAGGATaGTGGCCCATAGGAGCAAAGGCACCAGTTTTCATG | + |
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Preference number: 6 (lower is better) Translates to: ISTSLGTSLSTG*WPIGAKAPVFM Trigger: CATGAAAACTGGTGCCTTTGCTCCTATGGGCCATCATCCTGTTGATAGTGAGGTACCAAGAGAAGTGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000602579.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS GCA 72 bp | AGCCACTGTGCCCAGACTGAAGTTATCTTTGTAGGGTaGTTCTTTCACATGGGAGATGGAACATACAGATCC | + |
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Preference number: 6 (lower is better) Translates to: SHCAQTEVIFVG*FFHMGDGTYRS Trigger: GGATCTGTATGTTCCATCTCCCATGTGAAAGAAGCACCCTACAAAGATAACTTCAGTCTGGGCACAGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000602579.1 ENST00000647820.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS CAA 72 bp | GGCAGTAGCCACCAAGACAGAAGAAAACTTAAGCATTaGAAGAGGGAAATTCAATGGGCTCCAGGTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSSHQDRRKLKH*KREIQWAPGAF Trigger: GAAGGCACCTGGAGCCCATTGAATTTCCCTCTTCAAATGCTTAAGTTTTCTTCTGTCTTGGTGGCTACTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000602579.1 ENST00000647820.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS TCA 72 bp | AACTCCCAGAAGTTTGATAGAGCTCATGCGTGTCAATaGAACTGTAAAATCCAGTCAAGTCGCCATCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: NSQKFDRAHACQ*NCKIQSSRHPG Trigger: ACCAGGATGGCGACTTGACTGGATTTTACAGTTTCATTGACACGCATGAGCTCTATCAAACTTCTGGGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000602579.1 ENST00000647820.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS CAA 90 bp | TCCAGGTGCCTTCCATGTAAACATTTCAGAAAAACTCCCAGAAGTTaGATAGAGCTCATGCGTGTCAATGAAACTGTAAAATCCAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SRCLPCKHFRKTPRS*IELMRVNETVKSSQ Trigger: TTGACTGGATTTTACAGTTTCATTGACACGCATGAGCTCTATCAAACTTCTGGGAGTTTTTCTGAAATGTTTACATGGAAGGCACCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000602579.1 ENST00000647820.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS CCA 72 bp | AGTTATCTTTGTAGGGTGCTTCTTTCACATGGGAGATaGAACATACAGATCCAATACAGATGGGATTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SYLCRVLLSHGR*NIQIQYRWDCS Trigger: AGAACAATCCCATCTGTATTGGATCTGTATGTTCCATCTCCCATGTGAAAGAAGCACCCTACAAAGATAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000602579.1 ENST00000647820.1 ENST00000669870.1 ENST00000670732.1 |
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| CDS CAA 72 bp | CTTCCATGTAAACATTTCAGAAAAACTCCCAGAAGTTaGATAGAGCTCATGCGTGTCAATGAAACTGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LPCKHFRKTPRS*IELMRVNETVK Trigger: TTTTACAGTTTCATTGACACGCATGAGCTCTATCAAACTTCTGGGAGTTTTTCTGAAATGTTTACATGGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000602579.1 ENST00000647820.1 ENST00000669870.1 ENST00000670732.1 |
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