Pregenerated sensors for LINC02889 (Homo sapiens)
Ensembl gene IDs: ENSG00000236039Ensembl transcript IDs: ENST00000439046.1, ENST00000454003.2, ENST00000636929.1, ENST00000652982.1, ENST00000654345.1, ENST00000655831.1, ENST00000656566.1, ENST00000657616.1, ENST00000658415.1, ENST00000658953.1, ENST00000659688.1, ENST00000659904.1, ENST00000660262.1, ENST00000662264.1, ENST00000663308.1, ENST00000664658.1, ENST00000665552.1, ENST00000668924.1, ENST00000670938.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGTTTCTTGCTGGCCCATGTCTGTCCATCTCCATTCCTCGCCATGTaGTGCTTGAGTGTTCTCAAGACATGGCAGGTGGCTTGCCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: CFLLAHVCPSPFLAM*CLSVLKTWQVACPE Trigger: CTCAGGGCAAGCCACCTGCCATGTCTTGAGAACACTCAAGCAGCACATGGCGAGGAATGGAGATGGACAGACATGGGCCAGCAAGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000439046.1 ENST00000454003.2 ENST00000636929.1 ENST00000652982.1 ENST00000654345.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS CCA 90 bp | CCATCCTCCAGTCAACGGGGCTTTCAGGATCACGCAAGCTGTTGTTaGCAAGCCTGTTTCTTGCTGGCCCATGTCTGTCCATCTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: PSSSQRGFQDHASCC*QACFLLAHVCPSPF Trigger: GAATGGAGATGGACAGACATGGGCCAGCAAGAAACAGGCTTGCCAACAACAGCTTGCGTGATCCTGAAAGCCCCGTTGACTGGAGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000439046.1 ENST00000636929.1 ENST00000655831.1 ENST00000658953.1 ENST00000664658.1 ENST00000665552.1 |
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| CDS TCA 90 bp | GCCCTGAGCAAGAAATCTGTCAGGGTAGTTGTGATACAGCTGCAATaGCTGGAGGAGCCCCAGGGTCCTTGGTCTCACACTGATTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: ALSKKSVRVVVIQLQ*LEEPQGPWSHTDLA Trigger: AGCTAAATCAGTGTGAGACCAAGGACCCTGGGGCTCCTCCAGTCATTGCAGCTGTATCACAACTACCCTGACAGATTTCTTGCTCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000439046.1 ENST00000454003.2 ENST00000652982.1 ENST00000654345.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS CCA 90 bp | GTTCTGACTCAGGGTAGGTATCTCTTGAGGTTGCAGTTAAGTTGTTaGCCAGGGCAACAGTCACATGGGGCTAGAGGACCCACTTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: VLTQGRYLLRLQLSC*PGQQSHGARGPTFR Trigger: CCTGAAAGTGGGTCCTCTAGCCCCATGTGACTGTTGCCCTGGCCAACAACTTAACTGCAACCTCAAGAGATACCTACCCTGAGTCAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000454003.2 ENST00000652982.1 ENST00000654345.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS GCA 90 bp | TTTCCATCTTGCCATGGGGTCATACTTGAGGCCATTTTTCACACATaGAAGGGCAAAGCCGGGTCTTGGCAAATTCAGCCAGCTTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: FPSCHGVILEAIFHT*KGKAGSWQIQPACL Trigger: CAGGCAAGCTGGCTGAATTTGCCAAGACCCGGCTTTGCCCTTGCATGTGTGAAAAATGGCCTCAAGTATGACCCCATGGCAAGATGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655831.1 ENST00000656566.1 |
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| CDS CCA 90 bp | GAGTCCTTTCTTCCGCTACTGTTCATCAGAGGTGTTGAGACAAGCTaGGATGATGCCACACAACCTGCAACGTGCAACCCCAAAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: ESFLPLLFIRGVETS*DDATQPATCNPKSS Trigger: AGAACTTTTGGGGTTGCACGTTGCAGGTTGTGTGGCATCATCCCAGCTTGTCTCAACACCTCTGATGAACAGTAGCGGAAGAAAGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS CCA 90 bp | GGGACAGAGACTGAGAAGCCTAGGATGAGCCAGAAAGTTTGTGATTaGCACATACTTGCCTGGGGCCCAAGTCACCAGAAGTCAAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GTETEKPRMSQKVCD*HILAWGPSHQKSKV Trigger: AACTTTTGACTTCTGGTGACTTGGGCCCCAGGCAAGTATGTGCCAATCACAAACTTTCTGGCTCATCCTAGGCTTCTCAGTCTCTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000652982.1 ENST00000663308.1 |
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| CDS CCA 90 bp | CTCCTCCTTGCCTTCTGCCATGATCGTGAGGCCTCCCCGGCCATGTaGAACTGTAAGTCCAAGAAATCTCTTTCTTTTGTAAATTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LLLAFCHDREASPAM*NCKSKKSLSFVNCP Trigger: TGGGCAATTTACAAAAGAAAGAGATTTCTTGGACTTACAGTTCCACATGGCCGGGGAGGCCTCACGATCATGGCAGAAGGCAAGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656566.1 ENST00000659904.1 ENST00000662264.1 |
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| CDS CCA 90 bp | GTGGCTTGCCCTGAGCAAGAAATCTTTCCACATTCAAAGGTCACTTaGCCTAGAAAGATTTTTCTGACTCTCTTCTGGGCCCGTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VACPEQEIFPHSKVT*PRKIFLTLFWARLH Trigger: ATGAAGACGGGCCCAGAAGAGAGTCAGAAAAATCTTTCTAGGCCAAGTGACCTTTGAATGTGGAAAGATTTCTTGCTCAGGGCAAGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636929.1 |
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| CDS CCA 90 bp | AAGCCTAGGATGAGCCAGAAAGTTTGTGATTGGCACATACTTGCCTaGGGCCCAAGTCACCAGAAGTCAAAAGTTTCCTCAGGAAATAAT | + |
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Preference number: 5 (lower is better) Translates to: KPRMSQKVCDWHILA*GPSHQKSKVSSGNN Trigger: ATTATTTCCTGAGGAAACTTTTGACTTCTGGTGACTTGGGCCCCAGGCAAGTATGTGCCAATCACAAACTTTCTGGCTCATCCTAGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652982.1 ENST00000663308.1 |
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| CDS TCA 90 bp | AAAATCAAATTCAATATAGAGGGACAGAGACTGAGAAGCCTAGGATaGGCCAGAAAGTTTGTGATTGGCACATACTTGCCTGGGGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: KIKFNIEGQRLRSLG*ARKFVIGTYLPGAQ Trigger: TTGGGCCCCAGGCAAGTATGTGCCAATCACAAACTTTCTGGCTCATCCTAGGCTTCTCAGTCTCTGTCCCTCTATATTGAATTTGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000652982.1 ENST00000663308.1 |
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| CDS TCA 90 bp | AAAGGTGTTCATTTGAAATCCAGAAATGGGAGGATTAAAGAGTTTTaGCCTGGATCCTGTGTAGCTGAACTTTCTCTTGTTCCAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: KGVHLKSRNGRIKEF*PGSCVAELSLVPGP Trigger: TGGGCCTGGAACAAGAGAAAGTTCAGCTACACAGGATCCAGGTCAAAACTCTTTAATCCTCCCATTTCTGGATTTCAAATGAACACCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS GCA 90 bp | GTCCCATTCCAAATGGGTTCATTGTGTTTGAGTGGAAATATACTCTaGTGGGCAAGGAGGGAGAGCTGGAAAATTTCTAATACATTAGTG | + |
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Preference number: 5 (lower is better) Translates to: VPFQMGSLCLSGNIL*WARRESWKISNTLV Trigger: CACTAATGTATTAGAAATTTTCCAGCTCTCCCTCCTTGCCCAGCAGAGTATATTTCCACTCAAACACAATGAACCCATTTGGAATGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS CCA 90 bp | GAACTTCTTACACTGTTGACAAGCTGTTGTGGGAAAGCAAACCTCTaGAGGAGAACTGCTAGACAAAAAGGTGTTCATTTGAAATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ELLTLLTSCCGKANL*RRTARQKGVHLKSR Trigger: TCTGGATTTCAAATGAACACCTTTTTGTCTAGCAGTTCTCCTCCAGAGGTTTGCTTTCCCACAACAGCTTGTCAACAGTGTAAGAAGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS CCA 90 bp | TTGTGTTTGAGTGGAAATATACTCTGCTGGGCAAGGAGGGAGAGCTaGAAAATTTCTAATACATTAGTGACTTGTACCCCAGAACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: LCLSGNILCWARRES*KISNTLVTCTPELH Trigger: ATGAAGTTCTGGGGTACAAGTCACTAATGTATTAGAAATTTTCCAGCTCTCCCTCCTTGCCCAGCAGAGTATATTTCCACTCAAACACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS CCA 90 bp | CCATTCCAAATGGGTTCATTGTGTTTGAGTGGAAATATACTCTGCTaGGCAAGGAGGGAGAGCTGGAAAATTTCTAATACATTAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: PFQMGSLCLSGNILC*ARRESWKISNTLVT Trigger: AGTCACTAATGTATTAGAAATTTTCCAGCTCTCCCTCCTTGCCCAGCAGAGTATATTTCCACTCAAACACAATGAACCCATTTGGAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS CCA 72 bp | GCCATTTTTCACACATGCAAGGGCAAAGCCGGGTCTTaGCAAATTCAGCCAGCCTGGGGCCCAAGTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: AIFHTCKGKAGS*QIQPAWGPSHQ Trigger: CTGGTGACTTGGGCCCCAGGCTGGCTGAATTTGCCAAGACCCGGCTTTGCCCTTGCATGTGTGAAAAATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000454003.2 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 |
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| CDS CAA 90 bp | ATGGCCATCCTCCAGTCAACGGGGCTTTCAGGATCACGCAAGCTGTaGTTGGCAAGCCTGTTTCTTGCTGGCCCATGTCTGTCCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: MAILQSTGLSGSRKL*LASLFLAGPCLSIS Trigger: GGAGATGGACAGACATGGGCCAGCAAGAAACAGGCTTGCCAACAACAGCTTGCGTGATCCTGAAAGCCCCGTTGACTGGAGGATGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000439046.1 ENST00000636929.1 ENST00000655831.1 ENST00000658953.1 ENST00000664658.1 ENST00000665552.1 |
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| CDS GCA 72 bp | GCCCATGTCTGTCCATCTCCATTCCTCGCCATGTGCTaGTTGAGTGTTCTCAAGACATGGCAGGTGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: AHVCPSPFLAMC*LSVLKTWQVAC Trigger: GCAAGCCACCTGCCATGTCTTGAGAACACTCAAGCAGCACATGGCGAGGAATGGAGATGGACAGACATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000439046.1 ENST00000454003.2 ENST00000636929.1 ENST00000652982.1 ENST00000654345.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS GCA 72 bp | ATCCACATAAGATGTGACTTGCTCCTCCTTGCCTTCTaGCATGATCGTGAGGCCTCCCCGGCCATGTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: IHIRCDLLLLAF*HDREASPAMWN Trigger: GTTCCACATGGCCGGGGAGGCCTCACGATCATGGCAGAAGGCAAGGAGGAGCAAGTCACATCTTATGTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000454003.2 ENST00000636929.1 ENST00000652982.1 ENST00000654345.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS CCA 72 bp | GCCATTTTTCACACATGCAAGGGCAAAGCCGGGTCTTaGCAAATTCAGCCAGCTTGCCTGGGGCCCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: AIFHTCKGKAGS*QIQPACLGPKS Trigger: TGACTTGGGCCCCAGGCAAGCTGGCTGAATTTGCCAAGACCCGGCTTTGCCCTTGCATGTGTGAAAAATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655831.1 ENST00000656566.1 |
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| CDS CAA 72 bp | CAGGATCACGCAAGCTGTTGTTGGCAAGCCTGTTTCTaGCTGGCCCATGTCTGTCCATCTCCATTCCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: QDHASCCWQACF*LAHVCPSPFLA Trigger: GGCGAGGAATGGAGATGGACAGACATGGGCCAGCAAGAAACAGGCTTGCCAACAACAGCTTGCGTGATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000439046.1 ENST00000454003.2 ENST00000636929.1 ENST00000652982.1 ENST00000654345.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS CAA 72 bp | CAGTCAACGGGGCTTTCAGGATCACGCAAGCTGTTGTaGGCAAGCCTGTTTCTTGCTGGCCCATGTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QSTGLSGSRKLL*ASLFLAGPCLS Trigger: GGACAGACATGGGCCAGCAAGAAACAGGCTTGCCAACAACAGCTTGCGTGATCCTGAAAGCCCCGTTGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000439046.1 ENST00000636929.1 ENST00000655831.1 ENST00000658953.1 ENST00000664658.1 ENST00000665552.1 |
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| CDS CAA 72 bp | CTCCAGTCAACGGGGCTTTCAGGATCACGCAAGCTGTaGTTGGCAAGCCTGTTTCTTGCTGGCCCATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LQSTGLSGSRKL*LASLFLAGPCL Trigger: CAGACATGGGCCAGCAAGAAACAGGCTTGCCAACAACAGCTTGCGTGATCCTGAAAGCCCCGTTGACTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000439046.1 ENST00000636929.1 ENST00000655831.1 ENST00000658953.1 ENST00000664658.1 ENST00000665552.1 |
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| CDS CAA 72 bp | GGGCTAGAGGACCCACTTTCAGGATCACGCAAGCTGTaGTTGGCAAGCCTGTTTCTTGCTGGCCCATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GLEDPLSGSRKL*LASLFLAGPCL Trigger: CAGACATGGGCCAGCAAGAAACAGGCTTGCCAACAACAGCTTGCGTGATCCTGAAAGTGGGTCCTCTAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000454003.2 ENST00000652982.1 ENST00000654345.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS CAA 90 bp | GCCATCCTCCAGTCAACGGGGCTTTCAGGATCACGCAAGCTGTTGTaGGCAAGCCTGTTTCTTGCTGGCCCATGTCTGTCCATCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: AILQSTGLSGSRKLL*ASLFLAGPCLSISI Trigger: AATGGAGATGGACAGACATGGGCCAGCAAGAAACAGGCTTGCCAACAACAGCTTGCGTGATCCTGAAAGCCCCGTTGACTGGAGGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000439046.1 ENST00000636929.1 ENST00000655831.1 ENST00000658953.1 ENST00000664658.1 ENST00000665552.1 |
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| CDS GCA 72 bp | AGGATCACGCAAGCTGTTGTTGGCAAGCCTGTTTCTTaGTGGCCCATGTCTGTCCATCTCCATTCCTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: RITQAVVGKPVS*WPMSVHLHSSP Trigger: TGGCGAGGAATGGAGATGGACAGACATGGGCCAGCAAGAAACAGGCTTGCCAACAACAGCTTGCGTGATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000439046.1 ENST00000454003.2 ENST00000636929.1 ENST00000652982.1 ENST00000654345.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS CCA 72 bp | AGTCAACGGGGCTTTCAGGATCACGCAAGCTGTTGTTaGCAAGCCTGTTTCTTGCTGGCCCATGTCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SQRGFQDHASCC*QACFLLAHVCP Trigger: TGGACAGACATGGGCCAGCAAGAAACAGGCTTGCCAACAACAGCTTGCGTGATCCTGAAAGCCCCGTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000439046.1 ENST00000636929.1 ENST00000655831.1 ENST00000658953.1 ENST00000664658.1 ENST00000665552.1 |
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| CDS CCA 72 bp | CTTCCGCTACTGTTCATCAGAGGTGTTGAGACAAGCTaGGATGATGCCACACAACCTGCAACGTGCAACCCC | + |
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Preference number: 6 (lower is better) Translates to: LPLLFIRGVETS*DDATQPATCNP Trigger: GGGGTTGCACGTTGCAGGTTGTGTGGCATCATCCCAGCTTGTCTCAACACCTCTGATGAACAGTAGCGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS CAA 72 bp | CATGTCTGTCCATCTCCATTCCTCGCCATGTGCTGCTaGAGTGTTCTCAAGACATGGCAGGTGGCTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: HVCPSPFLAMCC*SVLKTWQVACP Trigger: AGGGCAAGCCACCTGCCATGTCTTGAGAACACTCAAGCAGCACATGGCGAGGAATGGAGATGGACAGACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000439046.1 ENST00000454003.2 ENST00000636929.1 ENST00000652982.1 ENST00000654345.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS TCA 72 bp | TTTTTCCCTGTCAGGGTAGTTGTGATACAGCTGCAATaGCTGGAGGAGCCCCAGGGTCCTTGGTCTCACACT | + |
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Preference number: 6 (lower is better) Translates to: FFPVRVVVIQLQ*LEEPQGPWSHT Trigger: AGTGTGAGACCAAGGACCCTGGGGCTCCTCCAGTCATTGCAGCTGTATCACAACTACCCTGACAGGGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636929.1 |
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| CDS TCA 72 bp | AAGAAATCTGTCAGGGTAGTTGTGATACAGCTGCAATaGCTGGAGGAGCCCCAGGGTCCTTGGTCTCACACT | + |
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Preference number: 6 (lower is better) Translates to: KKSVRVVVIQLQ*LEEPQGPWSHT Trigger: AGTGTGAGACCAAGGACCCTGGGGCTCCTCCAGTCATTGCAGCTGTATCACAACTACCCTGACAGATTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000439046.1 ENST00000454003.2 ENST00000652982.1 ENST00000654345.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS GCA 72 bp | CCACTTAGCATTGCACTTAGATACAGGACCATCTGCTaGTGGTTGTTTGGCAATTTGCCTGGGGCCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: PLSIALRYRTIC*WLFGNLPGAQV Trigger: GACTTGGGCCCCAGGCAAATTGCCAAACAACCAGCAGCAGATGGTCCTGTATCTAAGTGCAATGCTAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439046.1 |
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| CDS GCA 72 bp | TGCCATGGGGTCATACTTGAGGCCATTTTTCACACATaGAAGGGCAAAGCCGGGTCTTGGCAAATTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: CHGVILEAIFHT*KGKAGSWQIQP Trigger: TGGCTGAATTTGCCAAGACCCGGCTTTGCCCTTGCATGTGTGAAAAATGGCCTCAAGTATGACCCCATGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 |
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| CDS CCA 72 bp | ACTGAGAAGCCTAGGATGAGCCAGAAAGTTTGTGATTaGCACATACTTGCCTGGGGCCCAAGTCACCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TEKPRMSQKVCD*HILAWGPSHQK Trigger: CTTCTGGTGACTTGGGCCCCAGGCAAGTATGTGCCAATCACAAACTTTCTGGCTCATCCTAGGCTTCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652982.1 ENST00000663308.1 |
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| CDS CAA 72 bp | AGCATTGCACTTAGATACAGGACCATCTGCTGCTGGTaGTTTGGCAATTTGCCTGGGGCCCAAGTCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: SIALRYRTICCW*FGNLPGAQVTR Trigger: TCTGGTGACTTGGGCCCCAGGCAAATTGCCAAACAACCAGCAGCAGATGGTCCTGTATCTAAGTGCAATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000439046.1 |
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| CDS CAA 90 bp | TCATGTGGAAAGAGTCCTTTCTTCCGCTACTGTTCATCAGAGGTGTaGAGACAAGCTGGGATGATGCCACACAACCTGCAACGTGCAACC | + |
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Preference number: 6 (lower is better) Translates to: SCGKSPFFRYCSSEV*RQAGMMPHNLQRAT Trigger: GGTTGCACGTTGCAGGTTGTGTGGCATCATCCCAGCTTGTCTCAACACCTCTGATGAACAGTAGCGGAAGAAAGGACTCTTTCCACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS CAA 72 bp | TGGGTGGTTCTGACTCAGGGTAGGTATCTCTTGAGGTaGCAGTTAAGTTGTTGGCCAGGGCAACAGTCACAT | + |
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Preference number: 6 (lower is better) Translates to: WVVLTQGRYLLR*QLSCWPGQQSH Trigger: ATGTGACTGTTGCCCTGGCCAACAACTTAACTGCAACCTCAAGAGATACCTACCCTGAGTCAGAACCACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000454003.2 ENST00000652982.1 ENST00000654345.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS CAA 72 bp | TTTGACTGGGTGGTTCTGACTCAGGGTAGGTATCTCTaGAGGTTGCAGTTAAGTTGTTGGCCAGGGCAACAG | + |
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Preference number: 6 (lower is better) Translates to: FDWVVLTQGRYL*RLQLSCWPGQQ Trigger: CTGTTGCCCTGGCCAACAACTTAACTGCAACCTCAAGAGATACCTACCCTGAGTCAGAACCACCCAGTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000454003.2 ENST00000652982.1 ENST00000654345.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS CAA 90 bp | GGCCCAAGTCACCAGAAGTCAAAAGTTTCCTCAGGAAATAATGTGTaGTCAAATGGCCATCCTCCAGTCAACGGGGCTTTCAGGATCACG | + |
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Preference number: 6 (lower is better) Translates to: GPSHQKSKVSSGNNV*SNGHPPVNGAFRIT Trigger: CGTGATCCTGAAAGCCCCGTTGACTGGAGGATGGCCATTTGACAACACATTATTTCCTGAGGAAACTTTTGACTTCTGGTGACTTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000439046.1 ENST00000636929.1 ENST00000655831.1 ENST00000658953.1 ENST00000664658.1 ENST00000665552.1 |
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| CDS GCA 72 bp | TGCTGCTTGAGTGTTCTCAAGACATGGCAGGTGGCTTaGCCTGAGCAAGAAATCTTTCCACATTCAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CCLSVLKTWQVA*PEQEIFPHSKV Trigger: GACCTTTGAATGTGGAAAGATTTCTTGCTCAGGGCAAGCCACCTGCCATGTCTTGAGAACACTCAAGCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636929.1 |
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| CDS CAA 72 bp | TCACGAGATCTGATGGTTTTAAAAATGGGAGTCTCCTaGCACAAGCTCGCTCTCTCTTTGCCTGCTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SRDLMVLKMGVS*HKLALSLPAAI Trigger: GATGGCAGCAGGCAAAGAGAGAGCGAGCTTGTGCAAGGAGACTCCCATTTTTAAAACCATCAGATCTCGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 17 transcripts: ENST00000454003.2 ENST00000636929.1 ENST00000652982.1 ENST00000654345.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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| CDS CAA 72 bp | AAGAGTCCTTTCTTCCGCTACTGTTCATCAGAGGTGTaGAGACAAGCTGGGATGATGCCACACAACCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: KSPFFRYCSSEV*RQAGMMPHNLQ Trigger: TTGCAGGTTGTGTGGCATCATCCCAGCTTGTCTCAACACCTCTGATGAACAGTAGCGGAAGAAAGGACTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS CAA 90 bp | GGCCCAAGTCACCAGAAGTCAAAAGTTTCCTCAGGAAATAATGTGTaGTCAAATGGCCATCCTCCAGTCAACGGGGCAGTTACTCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: GPSHQKSKVSSGNNV*SNGHPPVNGAVTLS Trigger: ACTCAGAGTAACTGCCCCGTTGACTGGAGGATGGCCATTTGACAACACATTATTTCCTGAGGAAACTTTTGACTTCTGGTGACTTGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000454003.2 ENST00000657616.1 ENST00000662264.1 |
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| CDS TCA 72 bp | CACATTCAAAGGTCACTTGGCCTAGAAAGATTTTTCTaGCTCTCTTCTGGGCCCGTCTTCATCCCAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: HIQRSLGLERFF*LSSGPVFIPAV Trigger: TACAGCTGGGATGAAGACGGGCCCAGAAGAGAGTCAGAAAAATCTTTCTAGGCCAAGTGACCTTTGAATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636929.1 |
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| CDS TCA 72 bp | CTTGAGTGTTCTCAAGACATGGCAGGTGGCTTGCCCTaGGCAAGAAATCTTTCCACATTCAAAGGTCACTTG | + |
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Preference number: 6 (lower is better) Translates to: LECSQDMAGGLP*ARNLSTFKGHL Trigger: CAAGTGACCTTTGAATGTGGAAAGATTTCTTGCTCAGGGCAAGCCACCTGCCATGTCTTGAGAACACTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636929.1 |
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| CDS CAA 90 bp | GGCCCAAGTCACCAGAAGTCAAAAGTTTCCTCAGGAAATAATGTGTaGTCAAATGGCCATCCTCCAGTCAACGGGGCAGTAATTATCTCA | + |
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Preference number: 6 (lower is better) Translates to: GPSHQKSKVSSGNNV*SNGHPPVNGAVIIS Trigger: TGAGATAATTACTGCCCCGTTGACTGGAGGATGGCCATTTGACAACACATTATTTCCTGAGGAAACTTTTGACTTCTGGTGACTTGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668924.1 |
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| CDS CAA 72 bp | AGCAGCATGAAAACAGACACACTGTCCAACCAAGACTaGCTCTCTTTCCCAATCACTTCTTCACGAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSMKTDTLSNQD*LSFPITSSRTS Trigger: AGAGGTTCGTGAAGAAGTGATTGGGAAAGAGAGCAAGTCTTGGTTGGACAGTGTGTCTGTTTTCATGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656566.1 ENST00000659904.1 ENST00000660262.1 ENST00000662264.1 |
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| CDS CCA 72 bp | ACACTGTTGACAAGCTGTTGTGGGAAAGCAAACCTCTaGAGGAGAACTGCTAGACAAAAAGGTGTTCATTTG | + |
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Preference number: 6 (lower is better) Translates to: TLLTSCCGKANL*RRTARQKGVHL Trigger: CAAATGAACACCTTTTTGTCTAGCAGTTCTCCTCCAGAGGTTTGCTTTCCCACAACAGCTTGTCAACAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS CCA 72 bp | ATGGGTTCATTGTGTTTGAGTGGAAATATACTCTGCTaGGCAAGGAGGGAGAGCTGGAAAATTTCTAATACA | + |
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Preference number: 6 (lower is better) Translates to: MGSLCLSGNILC*ARRESWKISNT Trigger: TGTATTAGAAATTTTCCAGCTCTCCCTCCTTGCCCAGCAGAGTATATTTCCACTCAAACACAATGAACCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000454003.2 ENST00000655831.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000664658.1 ENST00000668924.1 |
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| CDS TCA 72 bp | CCCAGGACACCATCAGATGTTTACTCTTCTTCCACATaGTTCCTCTTCTTACCCTTGTATTTTCTATGCATT | + |
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Preference number: 6 (lower is better) Translates to: PRTPSDVYSSST*FLFLPLYFLCI Trigger: AATGCATAGAAAATACAAGGGTAAGAAGAGGAATCATGTGGAAGAAGAGTAAACATCTGATGGTGTCCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000636929.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000659904.1 ENST00000660262.1 ENST00000670938.1 |
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| CDS TCA 72 bp | GATGAGGATTTAAATTTGTTGGTCATGACAAAGAGATaGGGCTCCAAATGTGGCCCTAAATTGCATGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: DEDLNLLVMTKR*GSKCGPKLHAV Trigger: TACAGCATGCAATTTAGGGCCACATTTGGAGCCTCATCTCTTTGTCATGACCAACAAATTTAAATCCTCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660262.1 ENST00000665552.1 |
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| CDS CAA 72 bp | TTCATAAAAACTGATGTTGGTATTTGTAGAAGGTTATaGGTCCCAGCAAGAATCACAGTCGATAACTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FIKTDVGICRRL*VPARITVDNCS Trigger: GGAACAGTTATCGACTGTGATTCTTGCTGGGACCAATAACCTTCTACAAATACCAACATCAGTTTTTATGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000636929.1 ENST00000652982.1 ENST00000655831.1 ENST00000656566.1 ENST00000657616.1 ENST00000658415.1 ENST00000658953.1 ENST00000659688.1 ENST00000659904.1 ENST00000660262.1 ENST00000662264.1 ENST00000663308.1 ENST00000664658.1 ENST00000665552.1 ENST00000668924.1 ENST00000670938.1 |
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