Pregenerated sensors for LINC02885 (Homo sapiens)
Ensembl gene IDs: ENSG00000286592Ensembl transcript IDs: ENST00000665218.1, ENST00000668433.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTGCCATGCCTCTTCCAGCTTCTGGTGGTTGCTGGTGGTCTTTGGTaGCCCTCAGTTTGTAGGCGTGTCACTCCAATCTCTGCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: VPCLFQLLVVAGGLW*PSVCRRVTPISASS Trigger: GCTGGAGGCAGAGATTGGAGTGACACGCCTACAAACTGAGGGGCACCAAAGACCACCAGCAACCACCAGAAGCTGGAAGAGGCATGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS GCA 90 bp | AGCATGGTTGGTTCCTTCTGGAGGCTCTTGTGGTCATCTGTGCCATaGCTCTTCCAGCTTCTGGTGGTTGCTGGTGGTCTTTGGTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SMVGSFWRLLWSSVP*LFQLLVVAGGLWCP Trigger: GGGGCACCAAAGACCACCAGCAACCACCAGAAGCTGGAAGAGGCATGGCACAGATGACCACAAGAGCCTCCAGAAGGAACCAACCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS GCA 90 bp | TTTGTCTCACGCTGTTTGGGCTCCCAGCTTCCTGACTGCTCTGTCTaGCACGCTGAAAACACTGCCACTCCCAGGATACCAGGCTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: FVSRCLGSQLPDCSV*HAENTATPRIPGLE Trigger: TTCTAAGCCTGGTATCCTGGGAGTGGCAGTGTTTTCAGCGTGGCAGACAGAGCAGTCAGGAAGCTGGGAGCCCAAACAGCGTGAGACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CCA 90 bp | CAAAATCAAGGCGTCAGCATGGTTGGTTCCTTCTGGAGGCTCTTGTaGTCATCTGTGCCATGCCTCTTCCAGCTTCTGGTGGTTGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: QNQGVSMVGSFWRLL*SSVPCLFQLLVVAG Trigger: ACCAGCAACCACCAGAAGCTGGAAGAGGCATGGCACAGATGACCACAAGAGCCTCCAGAAGGAACCAACCATGCTGACGCCTTGATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS TCA 90 bp | GAGTCCACCAGTTGGAGAAGCCAGGACATCTTCCAAGAAATGGACTaGAACCACAGCAGTAACTCTCACCCCAGGTATCTGTCTCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: ESTSWRSQDIFQEMD*NHSSNSHPRYLSRG Trigger: GCCTCGAGACAGATACCTGGGGTGAGAGTTACTGCTGTGGTTTCAGTCCATTTCTTGGAAGATGTCCTGGCTTCTCCAACTGGTGGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS TCA 90 bp | GATATACCCAGAGGTGATGTCAGCTCAGAATTCGAAAGGGCAGAATaGTGGGTGGTCCCAGGTGGAAGTCTTGATAAGCATCATGGCACC | + |
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Preference number: 5 (lower is better) Translates to: DIPRGDVSSEFERAE*WVVPGGSLDKHHGT Trigger: GGTGCCATGATGCTTATCAAGACTTCCACCTGGGACCACCCATCATTCTGCCCTTTCGAATTCTGAGCTGACATCACCTCTGGGTATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CCA 90 bp | ACAAGGAGTCCACCAGTTGGAGAAGCCAGGACATCTTCCAAGAAATaGACTGAAACCACAGCAGTAACTCTCACCCCAGGTATCTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: TRSPPVGEARTSSKK*TETTAVTLTPGICL Trigger: GAGACAGATACCTGGGGTGAGAGTTACTGCTGTGGTTTCAGTCCATTTCTTGGAAGATGTCCTGGCTTCTCCAACTGGTGGACTCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS TCA 90 bp | GGGAGGAAAGAATTGGGAATAAAGGTTGGATCAGCCACCCAGCAGTaGATACCACACCTTCTAATCTGCCAAGCACTTTCACAACCAACA | + |
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Preference number: 5 (lower is better) Translates to: GRKELGIKVGSATQQ*IPHLLICQALSQPT Trigger: TGTTGGTTGTGAAAGTGCTTGGCAGATTAGAAGGTGTGGTATTCACTGCTGGGTGGCTGATCCAACCTTTATTCCCAATTCTTTCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS TCA 90 bp | TGGTCCCAGGTGGAAGTCTTGATAAGCATCATGGCACCCAACAGTTaGGCAGCAAAGGCTATGGCAAGAATAAGTGGAGATATTCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: WSQVEVLISIMAPNS*AAKAMARISGDILN Trigger: ATTCAGAATATCTCCACTTATTCTTGCCATAGCCTTTGCTGCTCAACTGTTGGGTGCCATGATGCTTATCAAGACTTCCACCTGGGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CCA 90 bp | TCTCCATGCTTCAATTACCTCCCACCGGATCCCTCTCATAACATGTaGGAATTATGGGAGCTACAATTCAAGATGAGATTTGCATGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SPCFNYLPPDPSHNM*ELWELQFKMRFAWG Trigger: TCCCCATGCAAATCTCATCTTGAATTGTAGCTCCCATAATTCCCACATGTTATGAGAGGGATCCGGTGGGAGGTAATTGAAGCATGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CCA 90 bp | TATGCCCATCTGATTCCTGTCCACATGCTGTGGAAGATGCAATACTaGGAAGGAGAACATATATTCCATGAAAGCAGGAGACATATTGTC | + |
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Preference number: 5 (lower is better) Translates to: YAHLIPVHMLWKMQY*EGEHIFHESRRHIV Trigger: GACAATATGTCTCCTGCTTTCATGGAATATATGTTCTCCTTCCCAGTATTGCATCTTCCACAGCATGTGGACAGGAATCAGATGGGCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CCA 90 bp | AACATGTGGGAATTATGGGAGCTACAATTCAAGATGAGATTTGCATaGGGACACAGCCAAACTATATCAGGCTACCATAACAGTGTACCA | + |
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Preference number: 5 (lower is better) Translates to: NMWELWELQFKMRFA*GHSQTISGYHNSVP Trigger: TGGTACACTGTTATGGTAGCCTGATATAGTTTGGCTGTGTCCCCATGCAAATCTCATCTTGAATTGTAGCTCCCATAATTCCCACATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS TCA 90 bp | CCCATTTATAAAACCATCAGATCTCATGAGATGTGTTCGCTATCATaGGAACAGCATGGGAAAGACCTTTCTCCATGCTTCAATTACCTC | + |
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Preference number: 5 (lower is better) Translates to: PIYKTIRSHEMCSLS*EQHGKDLSPCFNYL Trigger: GAGGTAATTGAAGCATGGAGAAAGGTCTTTCCCATGCTGTTCTCATGATAGCGAACACATCTCATGAGATCTGATGGTTTTATAAATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS GCA 90 bp | GACAAAAAGGCTAGAGATCATTGTTTTTGTGTTAACTTGTTGCATTaGTATCATATAACTGCTTTCACTTCAAGCACTGTGCAGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: DKKARDHCFCVNLLH*YHITAFTSSTVQSL Trigger: GAGGCTCTGCACAGTGCTTGAAGTGAAAGCAGTTATATGATAGCAATGCAACAAGTTAACACAAAAACAATGATCTCTAGCCTTTTTGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS GCA 72 bp | CCCCAGGTATCTGTCTCGAGGCCACCCTCCCTCAGATaGAAACAGAGGCCACACTGGCCCCCAAATCCACTG | + |
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Preference number: 6 (lower is better) Translates to: PQVSVSRPPSLR*KQRPHWPPNPL Trigger: CAGTGGATTTGGGGGCCAGTGTGGCCTCTGTTTGCATCTGAGGGAGGGTGGCCTCGAGACAGATACCTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CAA 90 bp | CACCGGGAGCACTTTCGACTGATGCGCGGCCTCTGTTTTGTGGCTTaGTCTCACGCTGTTTGGGCTCCCAGCTTCCTGACTGCTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: HREHFRLMRGLCFVA*SHAVWAPSFLTALS Trigger: AGACAGAGCAGTCAGGAAGCTGGGAGCCCAAACAGCGTGAGACAAAGCCACAAAACAGAGGCCGCGCATCAGTCGAAAGTGCTCCCGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS GCA 72 bp | CGCTGTTTGGGCTCCCAGCTTCCTGACTGCTCTGTCTaGCACGCTGAAAACACTGCCACTCCCAGGATACCA | + |
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Preference number: 6 (lower is better) Translates to: RCLGSQLPDCSV*HAENTATPRIP Trigger: TGGTATCCTGGGAGTGGCAGTGTTTTCAGCGTGGCAGACAGAGCAGTCAGGAAGCTGGGAGCCCAAACAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS GCA 72 bp | GATGCAAACAGAGGCCACACTGGCCCCCAAATCCACTaGTCTGAGAAAGTGGAACTGGTGCCCACCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: DANRGHTGPQIH*SEKVELVPTRL Trigger: CAGCCTGGTGGGCACCAGTTCCACTTTCTCAGAGCAGTGGATTTGGGGGCCAGTGTGGCCTCTGTTTGCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CAA 90 bp | GGCTCTTGTGGTCATCTGTGCCATGCCTCTTCCAGCTTCTGGTGGTaGCTGGTGGTCTTTGGTGCCCCTCAGTTTGTAGGCGTGTCACTC | + |
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Preference number: 6 (lower is better) Translates to: GSCGHLCHASSSFWW*LVVFGAPQFVGVSL Trigger: GAGTGACACGCCTACAAACTGAGGGGCACCAAAGACCACCAGCAACCACCAGAAGCTGGAAGAGGCATGGCACAGATGACCACAAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CAA 90 bp | TCGACTGATGCGCGGCCTCTGTTTTGTGGCTTTGTCTCACGCTGTTaGGGCTCCCAGCTTCCTGACTGCTCTGTCTGCCACGCTGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: STDARPLFCGFVSRC*GSQLPDCSVCHAEN Trigger: GTTTTCAGCGTGGCAGACAGAGCAGTCAGGAAGCTGGGAGCCCAAACAGCGTGAGACAAAGCCACAAAACAGAGGCCGCGCATCAGTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CAA 72 bp | GGTCATCTGTGCCATGCCTCTTCCAGCTTCTGGTGGTaGCTGGTGGTCTTTGGTGCCCCTCAGTTTGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: GHLCHASSSFWW*LVVFGAPQFVG Trigger: GCCTACAAACTGAGGGGCACCAAAGACCACCAGCAACCACCAGAAGCTGGAAGAGGCATGGCACAGATGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS GCA 72 bp | GGTTCCTTCTGGAGGCTCTTGTGGTCATCTGTGCCATaGCTCTTCCAGCTTCTGGTGGTTGCTGGTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: GSFWRLLWSSVP*LFQLLVVAGGL Trigger: AAGACCACCAGCAACCACCAGAAGCTGGAAGAGGCATGGCACAGATGACCACAAGAGCCTCCAGAAGGAACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CCA 72 bp | TGCCTCTTCCAGCTTCTGGTGGTTGCTGGTGGTCTTTaGTGCCCCTCAGTTTGTAGGCGTGTCACTCCAATC | + |
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Preference number: 6 (lower is better) Translates to: CLFQLLVVAGGL*CPSVCRRVTPI Trigger: GATTGGAGTGACACGCCTACAAACTGAGGGGCACCAAAGACCACCAGCAACCACCAGAAGCTGGAAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CAA 72 bp | CACTTTCGACTGATGCGCGGCCTCTGTTTTGTGGCTTaGTCTCACGCTGTTTGGGCTCCCAGCTTCCTGACT | + |
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Preference number: 6 (lower is better) Translates to: HFRLMRGLCFVA*SHAVWAPSFLT Trigger: AGTCAGGAAGCTGGGAGCCCAAACAGCGTGAGACAAAGCCACAAAACAGAGGCCGCGCATCAGTCGAAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS GCA 72 bp | CTCTTCCAGCTTCTGGTGGTTGCTGGTGGTCTTTGGTaGCCCTCAGTTTGTAGGCGTGTCACTCCAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: LFQLLVVAGGLW*PSVCRRVTPIS Trigger: AGAGATTGGAGTGACACGCCTACAAACTGAGGGGCACCAAAGACCACCAGCAACCACCAGAAGCTGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CCA 72 bp | GAGGCTGGAAGTCCAAAATCAAGGCGTCAGCATGGTTaGTTCCTTCTGGAGGCTCTTGTGGTCATCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: EAGSPKSRRQHG*FLLEALVVICA Trigger: GGCACAGATGACCACAAGAGCCTCCAGAAGGAACCAACCATGCTGACGCCTTGATTTTGGACTTCCAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CCA 72 bp | GAAGGTGAAGGAGGAACAAAGTCACGTCTCACATGGTaGCAGGCAAAGGGAGCATGTACAGGGAAACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: EGEGGTKSRLTW*QAKGACTGKLP Trigger: TGGGAGTTTCCCTGTACATGCTCCCTTTGCCTGCCACCATGTGAGACGTGACTTTGTTCCTCCTTCACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CAA 90 bp | CACAATTTGAGAGGCTGGAAGTCCAAAATCAAGGCGTCAGCATGGTaGGTTCCTTCTGGAGGCTCTTGTGGTCATCTGTGCCATGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: HNLRGWKSKIKASAW*VPSGGSCGHLCHAS Trigger: AGAGGCATGGCACAGATGACCACAAGAGCCTCCAGAAGGAACCAACCATGCTGACGCCTTGATTTTGGACTTCCAGCCTCTCAAATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CCA 72 bp | TTGAGAGGCTGGAAGTCCAAAATCAAGGCGTCAGCATaGTTGGTTCCTTCTGGAGGCTCTTGTGGTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: LRGWKSKIKASA*LVPSGGSCGHL Trigger: CAGATGACCACAAGAGCCTCCAGAAGGAACCAACCATGCTGACGCCTTGATTTTGGACTTCCAGCCTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CCA 72 bp | CCACCAGTTGGAGAAGCCAGGACATCTTCCAAGAAATaGACTGAAACCACAGCAGTAACTCTCACCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PPVGEARTSSKK*TETTAVTLTPG Trigger: ACCTGGGGTGAGAGTTACTGCTGTGGTTTCAGTCCATTTCTTGGAAGATGTCCTGGCTTCTCCAACTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS TCA 72 bp | AGTTGGAGAAGCCAGGACATCTTCCAAGAAATGGACTaGAACCACAGCAGTAACTCTCACCCCAGGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: SWRSQDIFQEMD*NHSSNSHPRYL Trigger: CAGATACCTGGGGTGAGAGTTACTGCTGTGGTTTCAGTCCATTTCTTGGAAGATGTCCTGGCTTCTCCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CAA 90 bp | GTGGTCCCAGGTGGAAGTCTTGATAAGCATCATGGCACCCAACAGTaGAGCAGCAAAGGCTATGGCAAGAATAAGTGGAGATATTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: VVPGGSLDKHHGTQQ*SSKGYGKNKWRYSE Trigger: TTCAGAATATCTCCACTTATTCTTGCCATAGCCTTTGCTGCTCAACTGTTGGGTGCCATGATGCTTATCAAGACTTCCACCTGGGACCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CCA 72 bp | CTCCCACCGGATCCCTCTCATAACATGTGGGAATTATaGGAGCTACAATTCAAGATGAGATTTGCATGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LPPDPSHNMWEL*ELQFKMRFAWG Trigger: TCCCCATGCAAATCTCATCTTGAATTGTAGCTCCCATAATTCCCACATGTTATGAGAGGGATCCGGTGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CAA 72 bp | GGTGGAAGTCTTGATAAGCATCATGGCACCCAACAGTaGAGCAGCAAAGGCTATGGCAAGAATAAGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GGSLDKHHGTQQ*SSKGYGKNKWR Trigger: TCTCCACTTATTCTTGCCATAGCCTTTGCTGCTCAACTGTTGGGTGCCATGATGCTTATCAAGACTTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CAA 72 bp | ACTATGACCCAGAGTCACACAAACATTAGAGACACGTaGTTAGGGAAGGACAAGGAGTCCACCAGTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TMTQSHTNIRDT*LGKDKESTSWR Trigger: TCTCCAACTGGTGGACTCCTTGTCCTTCCCTAACAACGTGTCTCTAATGTTTGTGTGACTCTGGGTCATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS TCA 72 bp | GAATTGGGAATAAAGGTTGGATCAGCCACCCAGCAGTaGATACCACACCTTCTAATCTGCCAAGCACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ELGIKVGSATQQ*IPHLLICQALS Trigger: TGAAAGTGCTTGGCAGATTAGAAGGTGTGGTATTCACTGCTGGGTGGCTGATCCAACCTTTATTCCCAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CCA 72 bp | TCTCTTCTCCATGGTTTTCTGTTGGCTGAGTCTGTGTaGTTCATTGATATACCCAGAGGTGATGTCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SLLHGFLLAESV*FIDIPRGDVSS Trigger: TGAGCTGACATCACCTCTGGGTATATCAATGAACCACACAGACTCAGCCAACAGAAAACCATGGAGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS TCA 72 bp | AAAACCATCAGATCTCATGAGATGTGTTCGCTATCATaGGAACAGCATGGGAAAGACCTTTCTCCATGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KTIRSHEMCSLS*EQHGKDLSPCF Trigger: GAAGCATGGAGAAAGGTCTTTCCCATGCTGTTCTCATGATAGCGAACACATCTCATGAGATCTGATGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS GCA 72 bp | TTCACAGATCCTAGCACCGGGAAAATGCCCAAGAAATaGAAGTTACCATTATTAGCAGTATTCCTAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: FTDPSTGKMPKK*KLPLLAVFLVS Trigger: TGACACTAGGAATACTGCTAATAATGGTAACTTGCATTTCTTGGGCATTTTCCCGGTGCTAGGATCTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CCA 72 bp | GAATTATGGGAGCTACAATTCAAGATGAGATTTGCATaGGGACACAGCCAAACTATATCAGGCTACCATAAC | + |
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Preference number: 6 (lower is better) Translates to: ELWELQFKMRFA*GHSQTISGYHN Trigger: GTTATGGTAGCCTGATATAGTTTGGCTGTGTCCCCATGCAAATCTCATCTTGAATTGTAGCTCCCATAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS CCA 72 bp | TTCAATTACCTCCCACCGGATCCCTCTCATAACATGTaGGAATTATGGGAGCTACAATTCAAGATGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: FNYLPPDPSHNM*ELWELQFKMRF Trigger: AAATCTCATCTTGAATTGTAGCTCCCATAATTCCCACATGTTATGAGAGGGATCCGGTGGGAGGTAATTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665218.1 |
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| CDS GCA 72 bp | ACTTTATTCCAGAGAAGTGATTGCAAACTTGGAAGATaGAACCTTCAATGTAAAGGAAAGGTGCCATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TLFQRSDCKLGR*NLQCKGKVPSR Trigger: TCTGGATGGCACCTTTCCTTTACATTGAAGGTTGCATCTTCCAAGTTTGCAATCACTTCTCTGGAATAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CCA 72 bp | GGCTCAGTTAGGCTCTTGGGATTCATTTTGAAGAACTaGCTCTTTCAGGTTCACATTTGGAAATATTTCATA | + |
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Preference number: 6 (lower is better) Translates to: GSVRLLGFILKN*LFQVHIWKYFI Trigger: TATGAAATATTTCCAAATGTGAACCTGAAAGAGCCAGTTCTTCAAAATGAATCCCAAGAGCCTAACTGAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CAA 72 bp | CACCTTCTAATCTGCCAAGCACTTTCACAACCAACATaGCTGCATAACATTCTTAGCCATGAAGTAAATATC | + |
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Preference number: 6 (lower is better) Translates to: HLLICQALSQPT*LHNILSHEVNI Trigger: GATATTTACTTCATGGCTAAGAATGTTATGCAGCAATGTTGGTTGTGAAAGTGCTTGGCAGATTAGAAGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CAA 72 bp | TGCTTGACTATTTTAAATTTAGGCTCAGTTAGGCTCTaGGGATTCATTTTGAAGAACTGGCTCTTTCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: CLTILNLGSVRL*GFILKNWLFQV Trigger: AACCTGAAAGAGCCAGTTCTTCAAAATGAATCCCAAGAGCCTAACTGAGCCTAAATTTAAAATAGTCAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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| CDS CAA 90 bp | TCACATGACAAAAAGGCTAGAGATCATTGTTTTTGTGTTAACTTGTaGCATTGCTATCATATAACTGCTTTCACTTCAAGCACTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SHDKKARDHCFCVNL*HCYHITAFTSSTVQ Trigger: CTGCACAGTGCTTGAAGTGAAAGCAGTTATATGATAGCAATGCAACAAGTTAACACAAAAACAATGATCTCTAGCCTTTTTGTCATGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000668433.1 |
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