Pregenerated sensors for LINC02884 (Homo sapiens)
Ensembl gene IDs: ENSG00000231246Ensembl transcript IDs: ENST00000427290.1, ENST00000654472.1, ENST00000658120.1, ENST00000659549.1, ENST00000663553.1
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACCCAGGATGGCCAGTGGGGACTAGCCAGGGCCTCAGGACCCATATaGGTAGGGCAGTGTCTGTGCTGCCCTAGGCCACCACAGCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: TQDGQWGLARASGPI*VGQCLCCPRPPQPR Trigger: CCTAGGCTGTGGTGGCCTAGGGCAGCACAGACACTGCCCTACCCATATGGGTCCTGAGGCCCTGGCTAGTCCCCACTGGCCATCCTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 90 bp | CTAGCCAGGGCCTCAGGACCCATATGGGTAGGGCAGTGTCTGTGCTaGCCTAGGCCACCACAGCCTAGGGGTGCTCAAAACCAACAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LARASGPIWVGQCLC*PRPPQPRGAQNQQG Trigger: GCCCTGTTGGTTTTGAGCACCCCTAGGCTGTGGTGGCCTAGGGCAGCACAGACACTGCCCTACCCATATGGGTCCTGAGGCCCTGGCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 90 bp | GGACTAGCCAGGGCCTCAGGACCCATATGGGTAGGGCAGTGTCTGTaGTGCCCTAGGCCACCACAGCCTAGGGGTGCTCAAAACCAACAG | + |
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Preference number: 5 (lower is better) Translates to: GLARASGPIWVGQCL*CPRPPQPRGAQNQQ Trigger: CTGTTGGTTTTGAGCACCCCTAGGCTGTGGTGGCCTAGGGCAGCACAGACACTGCCCTACCCATATGGGTCCTGAGGCCCTGGCTAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 90 bp | CCTGCGGCACTGGCGTTCCTCCCAGCACTTGCGGAGGGGCCTGTCTaGTTATCGCTTATTCCAGCACAGGAGGCAGTCATTCCAGATCAT | + |
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Preference number: 5 (lower is better) Translates to: PAALAFLPALAEGPV*LSLIPAQEAVIPDH Trigger: ATGATCTGGAATGACTGCCTCCTGTGCTGGAATAAGCGATAAGCAGACAGGCCCCTCCGCAAGTGCTGGGAGGAACGCCAGTGCCGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 90 bp | AGACAGGATTTCTCCGGGCCTGTCGTCCTCCACATACCCCTTTCATaGTGTGTTCTACCTGCGGCACTGGCGTTCCTCCCAGCACTTGCG | + |
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Preference number: 5 (lower is better) Translates to: RQDFSGPVVLHIPLS*CVLPAALAFLPALA Trigger: CGCAAGTGCTGGGAGGAACGCCAGTGCCGCAGGTAGAACACAGCATGAAAGGGGTATGTGGAGGACGACAGGCCCGGAGAAATCCTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | CAGGAGAGGAACAAGTCAGGGGACACCACCAGCCCTGGGACAGCGTaGCAGCATATCCAGAAGATCAGGAAACTGCCGCAGAGGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: QERNKSGDTTSPGTA*QHIQKIRKLPQRLG Trigger: ACCAAGCCTCTGCGGCAGTTTCCTGATCTTCTGGATATGCTGCCACGCTGTCCCAGGGCTGGTGGTGTCCCCTGACTTGTTCCTCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | TGGAGAACAAGGCCCAGAAACACGATGGAAACCCAGGATGGCCAGTaGGGACTAGCCAGGGCCTCAGGACCCATATGGGTAGGGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: WRTRPRNTMETQDGQ*GLARASGPIWVGQC Trigger: ACACTGCCCTACCCATATGGGTCCTGAGGCCCTGGCTAGTCCCCACTGGCCATCCTGGGTTTCCATCGTGTTTCTGGGCCTTGTTCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | TGCCTGGGAGGGCCAACAGCCAAAGAGAGCTTTCAGTCTCCAGGCTaGGAAAGTCAGGAGAGGAACAAGTCAGGGGACACCACCAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: CLGGPTAKESFQSPG*ESQERNKSGDTTSP Trigger: AGGGCTGGTGGTGTCCCCTGACTTGTTCCTCTCCTGACTTTCTCAGCCTGGAGACTGAAAGCTCTCTTTGGCTGTTGGCCCTCCCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658120.1 ENST00000659549.1 ENST00000663553.1 |
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| CDS GCA 90 bp | TCCAGGAAGCATCAGCCCCATTTCACCCTAACAGCCAGTGGACTCTaGCTGGGAGGGCCAACAGCCAAAGAGAGCTTTCAGTCTCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: SRKHQPHFTLTASGL*LGGPTAKESFQSPG Trigger: GCCTGGAGACTGAAAGCTCTCTTTGGCTGTTGGCCCTCCCAGGCAGAGTCCACTGGCTGTTAGGGTGAAATGGGGCTGATGCTTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000427290.1 ENST00000658120.1 ENST00000659549.1 ENST00000663553.1 |
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| CDS CCA 90 bp | AGGCAGGCAGGGTCTGTTTTCATGCACCACATGCCCAACCTAACCTaGGCCTTCAGGGAGCTGTCCACACCCTGTCCACAAGCCATGTGT | + |
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Preference number: 5 (lower is better) Translates to: RQAGSVFMHHMPNLT*AFRELSTPCPQAMC Trigger: ACACATGGCTTGTGGACAGGGTGTGGACAGCTCCCTGAAGGCCCAGGTTAGGTTGGGCATGTGGTGCATGAAAACAGACCCTGCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | AGAAAGCTGGAGAACAAGGCCCAGAAACACGATGGAAACCCAGGATaGCCAGTGGGGACTAGCCAGGGCCTCAGGACCCATATGGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: RKLENKAQKHDGNPG*PVGTSQGLRTHMGR Trigger: CCTACCCATATGGGTCCTGAGGCCCTGGCTAGTCCCCACTGGCCATCCTGGGTTTCCATCGTGTTTCTGGGCCTTGTTCTCCAGCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | TGCCCTAGGCCACCACAGCCTAGGGGTGCTCAAAACCAACAGGGCTaGCTGCCAAATCTCAAAGGCTCTGCCGCCACCATAAGGAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: CPRPPQPRGAQNQQG*LPNLKGSAATIRKV Trigger: GACTTTCCTTATGGTGGCGGCAGAGCCTTTGAGATTTGGCAGTCAGCCCTGTTGGTTTTGAGCACCCCTAGGCTGTGGTGGCCTAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | GGTGGATTCCAGGAAGCATCAGCCCCATTTCACCCTAACAGCCAGTaGACTCTGCCTGGGAGGGCCAACAGCCAAAGAGAGCTTTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: GGFQEASAPFHPNSQ*TLPGRANSQRELSV Trigger: GACTGAAAGCTCTCTTTGGCTGTTGGCCCTCCCAGGCAGAGTCCACTGGCTGTTAGGGTGAAATGGGGCTGATGCTTCCTGGAATCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000427290.1 ENST00000658120.1 ENST00000659549.1 ENST00000663553.1 |
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| CDS CCA 90 bp | CTGAGAAAGTCAGGAGAGGAACAAGTCAGGGGACACCACCAGCCCTaGGACAGCGTGGCAGCATATCCAGAAGATCAGGAAACTGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: LRKSGEEQVRGHHQP*DSVAAYPEDQETAA Trigger: TGCGGCAGTTTCCTGATCTTCTGGATATGCTGCCACGCTGTCCCAGGGCTGGTGGTGTCCCCTGACTTGTTCCTCTCCTGACTTTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
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| CDS TCA 90 bp | CCTGCTTGCTTGGAAAAGTCCACATTCTGGCCTTCCACTCTGGCCTaGGACAGGATTTCTCCGGGCCTGTCGTCCTCCACATACCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: PACLEKSTFWPSTLA*DRISPGLSSSTYPF Trigger: AAAGGGGTATGTGGAGGACGACAGGCCCGGAGAAATCCTGTCTCAGGCCAGAGTGGAAGGCCAGAATGTGGACTTTTCCAAGCAAGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | CAAAACCTGCTTGCTTGGAAAAGTCCACATTCTGGCCTTCCACTCTaGCCTGAGACAGGATTTCTCCGGGCCTGTCGTCCTCCACATACC | + |
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Preference number: 5 (lower is better) Translates to: QNLLAWKSPHSGLPL*PETGFLRACRPPHT Trigger: GGTATGTGGAGGACGACAGGCCCGGAGAAATCCTGTCTCAGGCCAGAGTGGAAGGCCAGAATGTGGACTTTTCCAAGCAAGCAGGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 90 bp | CAGCACAGAGGCCAGAGAACAGAACTAGCACAAGGTTCCCAGACCTaGAGGGAACTGACTAAGGAAGAGCTAGAAGCTTCTGTCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: QHRGQRTELAQGSQT*RELTKEELEASVRL Trigger: CAGCCTGACAGAAGCTTCTAGCTCTTCCTTAGTCAGTTCCCTGCAGGTCTGGGAACCTTGTGCTAGTTCTGTTCTCTGGCCTCTGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 90 bp | TTTCTGCATTCTTGGTCCCAAACCCTAGCTGAGTGTCTAGGACGCTaGTTCCCATCTGCCTACCTAGACTCCTGTTCACTGCTGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: FLHSWSQTLAECLGR*FPSAYLDSCSLLAP Trigger: AGGAGCCAGCAGTGAACAGGAGTCTAGGTAGGCAGATGGGAAGCAGCGTCCTAGACACTCAGCTAGGGTTTGGGACCAAGAATGCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | AACCCGGAGCTATTCATTTCTGCATTCTTGGTCCCAAACCCTAGCTaGGTGTCTAGGACGCTGCTTCCCATCTGCCTACCTAGACTCCTG | + |
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Preference number: 5 (lower is better) Translates to: NPELFISAFLVPNPS*VSRTLLPICLPRLL Trigger: CAGGAGTCTAGGTAGGCAGATGGGAAGCAGCGTCCTAGACACTCAGCTAGGGTTTGGGACCAAGAATGCAGAAATGAATAGCTCCGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | AGGATAGGAGGAAGAACTGTCTCATGCCTCTCTCCTGGCTTCTGGTaGTTGCTGGCAGTCCTTGATGTTCCCTGGCTTGTAGATGCATCA | + |
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Preference number: 5 (lower is better) Translates to: RIGGRTVSCLSPGFW*LLAVLDVPWLVDAS Trigger: TGATGCATCTACAAGCCAGGGAACATCAAGGACTGCCAGCAACCACCAGAAGCCAGGAGAGAGGCATGAGACAGTTCTTCCTCCTATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654472.1 ENST00000663553.1 |
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| CDS CCA 90 bp | CAGGGCAGGGTGGAGAGGAAATCCAACTCAGAGAAGGATGGCGAGTaGTGTGACTGCAGGTGTAGTACAGAGGGTTCACTCTTAGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: QGRVERKSNSEKDGE*CDCRCSTEGSLLGN Trigger: ATTTCCTAAGAGTGAACCCTCTGTACTACACCTGCAGTCACACCACTCGCCATCCTTCTCTGAGTTGGATTTCCTCTCCACCCTGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | CTGCTGGCTCCTAGGTTCCTAGAGATGTTGCAAAACCTGCTTGCTTaGAAAAGTCCACATTCTGGCCTTCCACTCTGGCCTGAGACAGGA | + |
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Preference number: 5 (lower is better) Translates to: LLAPRFLEMLQNLLA*KSPHSGLPLWPETG Trigger: TCCTGTCTCAGGCCAGAGTGGAAGGCCAGAATGTGGACTTTTCCAAGCAAGCAGGTTTTGCAACATCTCTAGGAACCTAGGAGCCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 90 bp | GTGGAGAGGAAATCCAACTCAGAGAAGGATGGCGAGTGGTGTGACTaGAGGTGTAGTACAGAGGGTTCACTCTTAGGAAATCCACCTGAG | + |
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Preference number: 5 (lower is better) Translates to: VERKSNSEKDGEWCD*RCSTEGSLLGNPPE Trigger: CTCAGGTGGATTTCCTAAGAGTGAACCCTCTGTACTACACCTGCAGTCACACCACTCGCCATCCTTCTCTGAGTTGGATTTCCTCTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 90 bp | GGGTGCTCAAAACCAACAGGGCTGACTGCCAAATCTCAAAGGCTCTaGCGCCACCATAAGGAAAGTCTGACCTGTTCCAGATTCTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: GCSKPTGLTAKSQRL*RHHKESLTCSRFLA Trigger: TGCTAAGAATCTGGAACAGGTCAGACTTTCCTTATGGTGGCGGCAGAGCCTTTGAGATTTGGCAGTCAGCCCTGTTGGTTTTGAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | CCCCAAAGAATGTGCATAGATTATTTTGTCACAGGAATGGCTCCTTaGAGCACGCAAATGCACCCTGCAGCAGGTGCTAGCTCGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: PQRMCIDYFVTGMAP*STQMHPAAGASSQK Trigger: CTTCTGCGAGCTAGCACCTGCTGCAGGGTGCATTTGCGTGCTCCAAGGAGCCATTCCTGTGACAAAATAATCTATGCACATTCTTTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | CAGGTGGGTGGGGAGGTCCCAAACCCAGAATGGTGCGTAGCTGGCTaGGCAGCACAAAGAAATGACGACTGTTCACTACAACATTATAAT | + |
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Preference number: 5 (lower is better) Translates to: QVGGEVPNPEWCVAG*AAQRNDDCSLQHYN Trigger: ATTATAATGTTGTAGTGAACAGTCGTCATTTCTTTGTGCTGCTCAGCCAGCTACGCACCATTCTGGGTTTGGGACCTCCCCACCCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | AACAAGAGGATTGCAAGAGGAAATCAAAGGACACAGCTTCACAGGTaGCAGCACAGAGGCCAGAGAACAGAACTAGCACAAGGTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: NKRIARGNQRTQLHR*QHRGQRTELAQGSQ Trigger: CTGGGAACCTTGTGCTAGTTCTGTTCTCTGGCCTCTGTGCTGTCACCTGTGAAGCTGTGTCCTTTGATTTCCTCTTGCAATCCTCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | GGATATGACTCAAGCAAGCCAGATAGCCCACAGACAAATGGGCCATaGAAGAAGAAAACCCTTACAAAAGCAGCACTACCAGCAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GYDSSKPDSPQTNGP*KKKTLTKAALPAVS Trigger: AGAGACTGCTGGTAGTGCTGCTTTTGTAAGGGTTTTCTTCTTCCATGGCCCATTTGTCTGTGGGCTATCTGGCTTGCTTGAGTCATATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | AGCCTCAGTGTCTTCCAATCTCACTCAGAGTATGATGTGCCAGTTTaGCTGAGCCATGGAGAGCCCGGATGTTTGCTCAAACATTATTCT | + |
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Preference number: 5 (lower is better) Translates to: SLSVFQSHSEYDVPV*LSHGEPGCLLKHYS Trigger: AGAATAATGTTTGAGCAAACATCCGGGCTCTCCATGGCTCAGTCAAACTGGCACATCATACTCTGAGTGAGATTGGAAGACACTGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | GACCTGTTCCAGATTCTTAGCAAAGTTCTCTTAAGAGTCAAAGTGTaGGATGGTACTGCCTGTTTGGCTGAACCAAGATCACAGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: DLFQILSKVLLRVKV*DGTACLAEPRSQAG Trigger: GCCAGCCTGTGATCTTGGTTCAGCCAAACAGGCAGTACCATCTCACACTTTGACTCTTAAGAGAACTTTGCTAAGAATCTGGAACAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 90 bp | AATAGAGGTTCTAGAATGAATGAAGCAAATCAGCTCCTCCCCCACTaGAGAAATCATGACCTGGTGTGCTCCACAAGCAGGCTGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: NRGSRMNEANQLLPH*RNHDLVCSTSRLMF Trigger: AAACATCAGCCTGCTTGTGGAGCACACCAGGTCATGATTTCTGCAGTGGGGGAGGAGCTGATTTGCTTCATTCATTCTAGAACCTCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000654472.1 ENST00000658120.1 ENST00000659549.1 |
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| CDS CCA 90 bp | ATTCTGGGTGTGTCAGTCAAGGTGTTTCTCAATGACATTAACATTTaGATCGGAATCCTCGATGGAATGCAGGCGCAGGCAGCTGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: ILGVSVKVFLNDINI*IGILDGMQAQAAER Trigger: TCTTTCAGCTGCCTGCGCCTGCATTCCATCGAGGATTCCGATCCAAATGTTAATGTCATTGAGAAACACCTTGACTGACACACCCAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | GCATGTTGCTTCCTGCACTGCTCCAACTTTTATAGCTTCTTCAATTaGCCACTCCATGTAGCTTGGGGCATTAATTACTCTGCACCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ACCFLHCSNFYSFFN*PLHVAWGINYSAPF Trigger: GAAGGGTGCAGAGTAATTAATGCCCCAAGCTACATGGAGTGGCCAATTGAAGAAGCTATAAAAGTTGGAGCAGTGCAGGAAGCAACATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
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| CDS TCA 90 bp | GAGGCCAAAATCCAAAATCATGGTGTCAGTAGAGTTGATTTCTTCTaGAGGATAGGAGGAAGAACTGTCTCATGCCTCTCTCCTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: EAKIQNHGVSRVDFF*RIGGRTVSCLSPGF Trigger: GAAGCCAGGAGAGAGGCATGAGACAGTTCTTCCTCCTATCCTTCAGAAGAAATCAACTCTACTGACACCATGATTTTGGATTTTGGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654472.1 ENST00000663553.1 |
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| CDS TCA 90 bp | GAAATGCTGTGTGTGAGTGTGAATGACTATGAAGGTTGCCAGCTGTaGGCAACAAGAGGATTGCAAGAGGAAATCAAAGGACACAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: EMLCVSVNDYEGCQL*ATRGLQEEIKGHSF Trigger: GAAGCTGTGTCCTTTGATTTCCTCTTGCAATCCTCTTGTTGCTCACAGCTGGCAACCTTCATAGTCATTCACACTCACACACAGCATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | AACTCCCCAGACGATTCCATGTCAACCACAGCTGCAAATGGAGAGTaGTCATCTCTGAATGATGGGGTTGATAGGAAGTATTTATCTCTG | + |
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Preference number: 5 (lower is better) Translates to: NSPDDSMSTTAANGE*SSLNDGVDRKYLSL Trigger: CAGAGATAAATACTTCCTATCAACCCCATCATTCAGAGATGACCACTCTCCATTTGCAGCTGTGGTTGACATGGAATCGTCTGGGGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | TCTCCTTGCAAAGCCACTGCATCCACAACAGAGGTTCTGTTTTACTaGAGATGGAAAAAGTCAGAAACTTCCTCCCTGGTATTTAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SPCKATASTTEVLFY*RWKKSETSSLVFRP Trigger: TGGCCTAAATACCAGGGAGGAAGTTTCTGACTTTTTCCATCTTCAGTAAAACAGAACCTCTGTTGTGGATGCAGTGGCTTTGCAAGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427290.1 |
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| CDS GCA 90 bp | TGTTTCTCAATGACATTAACATTTGGATCGGAATCCTCGATGGAATaGAGGCGCAGGCAGCTGAAAGAGATGGTGCAATTTGCATACTTC | + |
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Preference number: 5 (lower is better) Translates to: CFSMTLTFGSESSME*RRRQLKEMVQFAYF Trigger: GAAGTATGCAAATTGCACCATCTCTTTCAGCTGCCTGCGCCTGCATTCCATCGAGGATTCCGATCCAAATGTTAATGTCATTGAGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | TGCTCCAACTTTTATAGCTTCTTCAATTGGCCACTCCATGTAGCTTaGGGCATTAATTACTCTGCACCCTTCATTTGGAAGCAGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: CSNFYSFFNWPLHVA*GINYSAPFIWKQSF Trigger: GAAGCTCTGCTTCCAAATGAAGGGTGCAGAGTAATTAATGCCCCAAGCTACATGGAGTGGCCAATTGAAGAAGCTATAAAAGTTGGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
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| CDS GCA 90 bp | TTTAATTTGAGAGGACAAAGATCTCTATCTTTAGGGTTAACACCCTaGCTTCAGCCTCTTCCTCCACCACACTCATATTTTTCTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: FNLRGQRSLSLGLTP*LQPLPPPHSYFSGG Trigger: ACCCCCAGAAAAATATGAGTGTGGTGGAGGAAGAGGCTGAAGGCAGGGTGTTAACCCTAAAGATAGAGATCTTTGTCCTCTCAAATTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | ACCAAGAACTTTCTCTTAACTACTGAAGGCTCTAATAAAATAATGTaGTCTGTGCCTGAGCCTGAAGACAGCTGTCTCGGAAGAGGATCA | + |
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Preference number: 5 (lower is better) Translates to: TKNFLLTTEGSNKIM*SVPEPEDSCLGRGS Trigger: TGATCCTCTTCCGAGACAGCTGTCTTCAGGCTCAGGCACAGATCACATTATTTTATTAGAGCCTTCAGTAGTTAAGAGAAAGTTCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
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| CDS TCA 90 bp | CTGAAATCTCTGGGTCTTCCAAAGAGAAGAATCAGCCTTAATAGTTaGTTAGTGGATATGACTCAAGCAAGCCAGATAGCCCACAGACAA | + |
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Preference number: 5 (lower is better) Translates to: LKSLGLPKRRISLNS*LVDMTQASQIAHRQ Trigger: TTGTCTGTGGGCTATCTGGCTTGCTTGAGTCATATCCACTAATCAACTATTAAGGCTGATTCTTCTCTTTGGAAGACCCAGAGATTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | CACATGGTCATTTCTGAGGCTCAAAGTGTAGCCCAGAATCATAGCTaGAATCTCTGGGTCTTCCAAAGAGAAGAATCAGCCTTAATAGTT | + |
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Preference number: 5 (lower is better) Translates to: HMVISEAQSVAQNHS*NLWVFQREESALIV Trigger: AACTATTAAGGCTGATTCTTCTCTTTGGAAGACCCAGAGATTTCAGCTATGATTCTGGGCTACACTTTGAGCCTCAGAAATGACCATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 90 bp | GGTAAAATTCAAGTTGGAGTTACCTTTAGAGAGAGGAGAGAAATTTaGATGAGGAGGGACACACAGGGGAACTTCATAGGGACTGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: GKIQVGVTFRERREI*MRRDTQGNFIGTGN Trigger: ATTACCAGTCCCTATGAAGTTCCCCTGTGTGTCCCTCCTCATTCAAATTTCTCTCCTCTCTCTAAAGGTAACTCCAACTTGAATTTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 90 bp | AGGTTCTGTTTTACTGAAGATGGAAAAAGTCAGAAACTTCCTCCCTaGTATTTAGGCCATGTACTGTTGGAAGGGAAGCTCTTCACAACA | + |
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Preference number: 5 (lower is better) Translates to: RFCFTEDGKSQKLPP*YLGHVLLEGKLFTT Trigger: TGTTGTGAAGAGCTTCCCTTCCAACAGTACATGGCCTAAATACCAGGGAGGAAGTTTCTGACTTTTTCCATCTTCAGTAAAACAGAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427290.1 |
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| CDS TCA 90 bp | CAAAAACAACCAGATTTAACATCAGCTAGAATAGAGGTTCTAGAATaGATGAAGCAAATCAGCTCCTCCCCCACTGCAGAAATCATGACC | + |
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Preference number: 5 (lower is better) Translates to: QKQPDLTSARIEVLE*MKQISSSPTAEIMT Trigger: GGTCATGATTTCTGCAGTGGGGGAGGAGCTGATTTGCTTCATTCATTCTAGAACCTCTATTCTAGCTGATGTTAAATCTGGTTGTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000654472.1 ENST00000658120.1 ENST00000659549.1 |
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| CDS GCA 90 bp | ATTATTGTTTTAAAATTCTCCATGACATTGCACATCGTTATTTCTTaGATTCAAGGCAAAGCACTCCAACCTCCTTTGGTACTGACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IIVLKFSMTLHIVIS*IQGKALQPPLVLTS Trigger: GCTGGTCAGTACCAAAGGAGGTTGGAGTGCTTTGCCTTGAATGCAAGAAATAACGATGTGCAATGTCATGGAGAATTTTAAAACAATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
||
| CDS CCA 90 bp | GTTTGGACTGGTTTGAATTGGGTTGTCAATTTAATTGCTACTAACTaGGTTCTCACTTTGCAAACAAACAAACAAAAACCCAAAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VWTGLNWVVNLIATN*VLTLQTNKQKPKTS Trigger: AGAAGTTTTGGGTTTTTGTTTGTTTGTTTGCAAAGTGAGAACCCAGTTAGTAGCAATTAAATTGACAACCCAATTCAAACCAGTCCAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS GCA 72 bp | GGCAGCGCCGGGGATCCTCACCTCCTCTCTAGTTGTTaGCACTGGGGGACGAGCCGGAATCCTCGATGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GSAGDPHLLSSC*HWGTSRNPRWN Trigger: ATTCCATCGAGGATTCCGGCTCGTCCCCCAGTGGCAACAACTAGAGAGGAGGTGAGGATCCCCGGCGCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427290.1 |
||
| CDS GCA 72 bp | AGGGCCTCAGGACCCATATGGGTAGGGCAGTGTCTGTaGTGCCCTAGGCCACCACAGCCTAGGGGTGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RASGPIWVGQCL*CPRPPQPRGAQ Trigger: TTGAGCACCCCTAGGCTGTGGTGGCCTAGGGCAGCACAGACACTGCCCTACCCATATGGGTCCTGAGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CAA 90 bp | GGAGCACGCAAATGCACCCTGCAGCAGGTGCTAGCTCGCAGAAGGTaGAACACCAAGGGGGCCAGGCCTGCAAAAGGGAGGCACCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: GARKCTLQQVLARRR*NTKGARPAKGRHQC Trigger: GCATTGGTGCCTCCCTTTTGCAGGCCTGGCCCCCTTGGTGTTCAACCTTCTGCGAGCTAGCACCTGCTGCAGGGTGCATTTGCGTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS GCA 72 bp | GCCTGTTTGGCTGAACCAAGATCACAGGCTGGCTCCTaGATGGCCTTTGGGCTGGGAGAGAGGAACTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ACLAEPRSQAGS*MAFGLGERNSP Trigger: GGGGGAGTTCCTCTCTCCCAGCCCAAAGGCCATGCAGGAGCCAGCCTGTGATCTTGGTTCAGCCAAACAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS GCA 72 bp | GCCTCAGGACCCATATGGGTAGGGCAGTGTCTGTGCTaGCCTAGGCCACCACAGCCTAGGGGTGCTCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ASGPIWVGQCLC*PRPPQPRGAQN Trigger: GTTTTGAGCACCCCTAGGCTGTGGTGGCCTAGGGCAGCACAGACACTGCCCTACCCATATGGGTCCTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS GCA 72 bp | TTCTCCGGGCCTGTCGTCCTCCACATACCCCTTTCATaGTGTGTTCTACCTGCGGCACTGGCGTTCCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSGPVVLHIPLS*CVLPAALAFLP Trigger: TGGGAGGAACGCCAGTGCCGCAGGTAGAACACAGCATGAAAGGGGTATGTGGAGGACGACAGGCCCGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CCA 72 bp | AGGCCCAGAAACACGATGGAAACCCAGGATGGCCAGTaGGGACTAGCCAGGGCCTCAGGACCCATATGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RPRNTMETQDGQ*GLARASGPIWV Trigger: TACCCATATGGGTCCTGAGGCCCTGGCTAGTCCCCACTGGCCATCCTGGGTTTCCATCGTGTTTCTGGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CCA 72 bp | ACATACCCCTTTCATGCTGTGTTCTACCTGCGGCACTaGCGTTCCTCCCAGCACTTGCGGAGGGGCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TYPFHAVFYLRH*RSSQHLRRGLS Trigger: AGACAGGCCCCTCCGCAAGTGCTGGGAGGAACGCCAGTGCCGCAGGTAGAACACAGCATGAAAGGGGTATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CAA 72 bp | AAATGCACCCTGCAGCAGGTGCTAGCTCGCAGAAGGTaGAACACCAAGGGGGCCAGGCCTGCAAAAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KCTLQQVLARRR*NTKGARPAKGR Trigger: CCTCCCTTTTGCAGGCCTGGCCCCCTTGGTGTTCAACCTTCTGCGAGCTAGCACCTGCTGCAGGGTGCATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CAA 72 bp | GTGTTCTACCTGCGGCACTGGCGTTCCTCCCAGCACTaGCGGAGGGGCCTGTCTGCTTATCGCTTATTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VFYLRHWRSSQH*RRGLSAYRLFQ Trigger: CTGGAATAAGCGATAAGCAGACAGGCCCCTCCGCAAGTGCTGGGAGGAACGCCAGTGCCGCAGGTAGAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CAA 90 bp | TTTCATGCTGTGTTCTACCTGCGGCACTGGCGTTCCTCCCAGCACTaGCGGAGGGGCCTGTCTGCTTATCGCTTATTCCAGCACAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FHAVFYLRHWRSSQH*RRGLSAYRLFQHRR Trigger: CCTCCTGTGCTGGAATAAGCGATAAGCAGACAGGCCCCTCCGCAAGTGCTGGGAGGAACGCCAGTGCCGCAGGTAGAACACAGCATGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS GCA 72 bp | CTGGCGTTCCTCCCAGCACTTGCGGAGGGGCCTGTCTaGTTATCGCTTATTCCAGCACAGGAGGCAGTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LAFLPALAEGPV*LSLIPAQEAVI Trigger: AATGACTGCCTCCTGTGCTGGAATAAGCGATAAGCAGACAGGCCCCTCCGCAAGTGCTGGGAGGAACGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CCA 72 bp | CAGGAAGCATCAGCCCCATTTCACCCTAACAGCCAGTaGACTCTGCCTGGGAGGGCCAACAGCCAAAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QEASAPFHPNSQ*TLPGRANSQRE Trigger: CTCTCTTTGGCTGTTGGCCCTCCCAGGCAGAGTCCACTGGCTGTTAGGGTGAAATGGGGCTGATGCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000427290.1 ENST00000654472.1 ENST00000658120.1 ENST00000659549.1 ENST00000663553.1 |
||
| CDS TCA 72 bp | CCACCACAGCCTAGGGGTGCTCAAAACCAACAGGGCTaGCTGCCAAATCTCAAAGGCTCTGCCGCCACCATA | + |
|
Preference number: 6 (lower is better) Translates to: PPQPRGAQNQQG*LPNLKGSAATI Trigger: TATGGTGGCGGCAGAGCCTTTGAGATTTGGCAGTCAGCCCTGTTGGTTTTGAGCACCCCTAGGCTGTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS GCA 72 bp | TTGCCACTGGGGGACGAGCCGGAATCCTCGATGGAATaGAGGCGCAGGCAGCTGAAAGAGATGGTGCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LPLGDEPESSME*RRRQLKEMVQF Trigger: AAATTGCACCATCTCTTTCAGCTGCCTGCGCCTGCATTCCATCGAGGATTCCGGCTCGTCCCCCAGTGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427290.1 |
||
| CDS GCA 72 bp | AGCTCGCAGAAGGTTGAACACCAAGGGGGCCAGGCCTaGAAAAGGGAGGCACCAATGCAGGATATGCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSQKVEHQGGQA*KREAPMQDMQV Trigger: GACTTGCATATCCTGCATTGGTGCCTCCCTTTTGCAGGCCTGGCCCCCTTGGTGTTCAACCTTCTGCGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS TCA 72 bp | TTGGAAAAGTCCACATTCTGGCCTTCCACTCTGGCCTaGGACAGGATTTCTCCGGGCCTGTCGTCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LEKSTFWPSTLA*DRISPGLSSST Trigger: TGTGGAGGACGACAGGCCCGGAGAAATCCTGTCTCAGGCCAGAGTGGAAGGCCAGAATGTGGACTTTTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS GCA 72 bp | GCCCAAGTCACTCAGCCTCCGGAATCCTCGATGGAATaGAGGCGCAGGCAGCTGAAAGAGATGGTGCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: AQVTQPPESSME*RRRQLKEMVQF Trigger: AAATTGCACCATCTCTTTCAGCTGCCTGCGCCTGCATTCCATCGAGGATTCCGGAGGCTGAGTGACTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658120.1 |
||
| CDS CCA 72 bp | CTTGCTTGGAAAAGTCCACATTCTGGCCTTCCACTCTaGCCTGAGACAGGATTTCTCCGGGCCTGTCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LAWKSPHSGLPL*PETGFLRACRP Trigger: AGGACGACAGGCCCGGAGAAATCCTGTCTCAGGCCAGAGTGGAAGGCCAGAATGTGGACTTTTCCAAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 72 bp | AAGGGCCGGGGTGCTGGAAATCTGAGAAATCTGAGCTaGGAGGCAGGCAGGGTCTGTTTTCATGCACCACAT | + |
|
Preference number: 6 (lower is better) Translates to: KGRGAGNLRNLS*EAGRVCFHAPH Trigger: ATGTGGTGCATGAAAACAGACCCTGCCTGCCTCTCAGCTCAGATTTCTCAGATTTCCAGCACCCCGGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS GCA 72 bp | TCTTGGTCCCAAACCCTAGCTGAGTGTCTAGGACGCTaGTTCCCATCTGCCTACCTAGACTCCTGTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SWSQTLAECLGR*FPSAYLDSCSL Trigger: CAGTGAACAGGAGTCTAGGTAGGCAGATGGGAAGCAGCGTCCTAGACACTCAGCTAGGGTTTGGGACCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CCA 72 bp | GGCTTCTGGTGGTTGCTGGCAGTCCTTGATGTTCCCTaGCTTGTAGATGCATCATCACTCCAATCTCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GFWWLLAVLDVP*LVDASSLQSPP Trigger: AGGCGGAGATTGGAGTGATGATGCATCTACAAGCCAGGGAACATCAAGGACTGCCAGCAACCACCAGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654472.1 ENST00000663553.1 |
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| CDS TCA 72 bp | ACTCAGCCTCAGTGTCTTCCAATCTCACTCAGAGTATaGTGTGCCAGTTTGACTGAGCCATGGAGAGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TQPQCLPISLRV*CASLTEPWRAR Trigger: CCGGGCTCTCCATGGCTCAGTCAAACTGGCACATCATACTCTGAGTGAGATTGGAAGACACTGAGGCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS TCA 72 bp | GGGGAGGTCCCAAACCCAGAATGGTGCGTAGCTGGCTaGGCAGCACAAAGAAATGACGACTGTTCACTACAA | + |
|
Preference number: 6 (lower is better) Translates to: GEVPNPEWCVAG*AAQRNDDCSLQ Trigger: TTGTAGTGAACAGTCGTCATTTCTTTGTGCTGCTCAGCCAGCTACGCACCATTCTGGGTTTGGGACCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 72 bp | ATGCAGGCGCAGGCAGCTGAAAGAGATGGTGCAATTTaGATACTTCTGGTGGATTCCAGGAAGCATCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: MQAQAAERDGAI*ILLVDSRKHQP Trigger: GGGCTGATGCTTCCTGGAATCCACCAGAAGTATGCAAATTGCACCATCTCTTTCAGCTGCCTGCGCCTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000427290.1 ENST00000654472.1 ENST00000658120.1 ENST00000659549.1 ENST00000663553.1 |
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| CDS CCA 72 bp | GTGGAGAGGAAATCCAACTCAGAGAAGGATGGCGAGTaGTGTGACTGCAGGTGTAGTACAGAGGGTTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: VERKSNSEKDGE*CDCRCSTEGSL Trigger: GAGTGAACCCTCTGTACTACACCTGCAGTCACACCACTCGCCATCCTTCTCTGAGTTGGATTTCCTCTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CAA 90 bp | ATAGGAGGAAGAACTGTCTCATGCCTCTCTCCTGGCTTCTGGTGGTaGCTGGCAGTCCTTGATGTTCCCTGGCTTGTAGATGCATCATCA | + |
|
Preference number: 6 (lower is better) Translates to: IGGRTVSCLSPGFWW*LAVLDVPWLVDASS Trigger: TGATGATGCATCTACAAGCCAGGGAACATCAAGGACTGCCAGCAACCACCAGAAGCCAGGAGAGAGGCATGAGACAGTTCTTCCTCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654472.1 ENST00000663553.1 |
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| CDS GCA 72 bp | GGCCAGAGAACAGAACTAGCACAAGGTTCCCAGACCTaGAGGGAACTGACTAAGGAAGAGCTAGAAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQRTELAQGSQT*RELTKEELEAS Trigger: AGAAGCTTCTAGCTCTTCCTTAGTCAGTTCCCTGCAGGTCTGGGAACCTTGTGCTAGTTCTGTTCTCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 72 bp | AAACCAACAGGGCTGACTGCCAAATCTCAAAGGCTCTaGCGCCACCATAAGGAAAGTCTGACCTGTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KPTGLTAKSQRL*RHHKESLTCSR Trigger: TCTGGAACAGGTCAGACTTTCCTTATGGTGGCGGCAGAGCCTTTGAGATTTGGCAGTCAGCCCTGTTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 72 bp | GCTCTTCACAACACCTCTGAGAGGAACTCGAGTTCCTaGTACCACAGCAATGACTACAGCTTTTTGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALHNTSERNSSS*YHSNDYSFLAS Trigger: GGAGGCCAAAAAGCTGTAGTCATTGCTGTGGTATCAGGAACTCGAGTTCCTCTCAGAGGTGTTGTGAAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427290.1 |
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| CDS TCA 72 bp | CTATTCATTTCTGCATTCTTGGTCCCAAACCCTAGCTaGGTGTCTAGGACGCTGCTTCCCATCTGCCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: LFISAFLVPNPS*VSRTLLPICLP Trigger: AGGTAGGCAGATGGGAAGCAGCGTCCTAGACACTCAGCTAGGGTTTGGGACCAAGAATGCAGAAATGAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 72 bp | TCTAGAATGAATGAAGCAAATCAGCTCCTCCCCCACTaGAGAAATCATGACCTGGTGTGCTCCACAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRMNEANQLLPH*RNHDLVCSTSR Trigger: CCTGCTTGTGGAGCACACCAGGTCATGATTTCTGCAGTGGGGGAGGAGCTGATTTGCTTCATTCATTCTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000654472.1 ENST00000658120.1 ENST00000659549.1 |
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| CDS CCA 72 bp | AGGCAGCTGAAAGAGATGGTGCAATTTGCATACTTCTaGTGGATTCCAGGAAGCATCAGCCCCATTTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: RQLKEMVQFAYF*WIPGSISPISP Trigger: GGGTGAAATGGGGCTGATGCTTCCTGGAATCCACCAGAAGTATGCAAATTGCACCATCTCTTTCAGCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000427290.1 ENST00000654472.1 ENST00000658120.1 ENST00000659549.1 ENST00000663553.1 |
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| CDS CCA 72 bp | CGAGTTCCTGATACCACAGCAATGACTACAGCTTTTTaGCCTCCTAGAGGTGAGAAACGACTGTGGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RVPDTTAMTTAF*PPRGEKRLWVE Trigger: TTCCACCCACAGTCGTTTCTCACCTCTAGGAGGCCAAAAAGCTGTAGTCATTGCTGTGGTATCAGGAACTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427290.1 |
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| CDS CCA 72 bp | CCTAGGTTCCTAGAGATGTTGCAAAACCTGCTTGCTTaGAAAAGTCCACATTCTGGCCTTCCACTCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRFLEMLQNLLA*KSPHSGLPLWP Trigger: AGGCCAGAGTGGAAGGCCAGAATGTGGACTTTTCCAAGCAAGCAGGTTTTGCAACATCTCTAGGAACCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CAA 90 bp | TACCTAGACTCCTGTTCACTGCTGGCTCCTAGGTTCCTAGAGATGTaGCAAAACCTGCTTGCTTGGAAAAGTCCACATTCTGGCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: YLDSCSLLAPRFLEM*QNLLAWKSPHSGLP Trigger: TGGAAGGCCAGAATGTGGACTTTTCCAAGCAAGCAGGTTTTGCAACATCTCTAGGAACCTAGGAGCCAGCAGTGAACAGGAGTCTAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 72 bp | TCCTTGGCCAGAAGAGTTTCTTTTCCCAAACCCCTGTaGTACAGAGATGGGCATGATGGCTATGAGTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLARRVSFPKPL*YRDGHDGYECS Trigger: AGAGCACTCATAGCCATCATGCCCATCTCTGTATCACAGGGGTTTGGGAAAAGAAACTCTTCTGGCCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654472.1 ENST00000658120.1 ENST00000659549.1 |
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| CDS TCA 72 bp | GTCTTCCAATCTCACTCAGAGTATGATGTGCCAGTTTaGCTGAGCCATGGAGAGCCCGGATGTTTGCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VFQSHSEYDVPV*LSHGEPGCLLK Trigger: TTTGAGCAAACATCCGGGCTCTCCATGGCTCAGTCAAACTGGCACATCATACTCTGAGTGAGATTGGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 72 bp | GAAAACCCTTACAAAAGCAGCACTACCAGCAGTCTCTaGGATAGACAAGCAGAAGGCTACAGGGCTACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ENPYKSSTTSSL*DRQAEGYRATR Trigger: CCTTGTAGCCCTGTAGCCTTCTGCTTGTCTATCTCAGAGACTGCTGGTAGTGCTGCTTTTGTAAGGGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CAA 72 bp | CTTAGGCAGACAGGCACCAGAAAAGTATTGCGGCATTaGCCCGTGAGGTCACCACTAAACACATGGTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: LRQTGTRKVLRH*PVRSPLNTWSF Trigger: AAATGACCATGTGTTTAGTGGTGACCTCACGGGCAAATGCCGCAATACTTTTCTGGTGCCTGTCTGCCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CAA 90 bp | AAGAAAAGACTTAGGCAGACAGGCACCAGAAAAGTATTGCGGCATTaGCCCGTGAGGTCACCACTAAACACATGGTCATTTCTGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KKRLRQTGTRKVLRH*PVRSPLNTWSFLRL Trigger: GAGCCTCAGAAATGACCATGTGTTTAGTGGTGACCTCACGGGCAAATGCCGCAATACTTTTCTGGTGCCTGTCTGCCTAAGTCTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CAA 90 bp | GGAAAAAGTCAGAAACTTCCTCCCTGGTATTTAGGCCATGTACTGTaGGAAGGGAAGCTCTTCACAACACCTCTGAGAGGAACTCGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GKSQKLPPWYLGHVL*EGKLFTTPLRGTRV Trigger: AACTCGAGTTCCTCTCAGAGGTGTTGTGAAGAGCTTCCCTTCCAACAGTACATGGCCTAAATACCAGGGAGGAAGTTTCTGACTTTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427290.1 |
||
| CDS CAA 90 bp | GTGACAGAGAAGAAAAGACTTAGGCAGACAGGCACCAGAAAAGTATaGCGGCATTTGCCCGTGAGGTCACCACTAAACACATGGTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: VTEKKRLRQTGTRKV*RHLPVRSPLNTWSF Trigger: AAATGACCATGTGTTTAGTGGTGACCTCACGGGCAAATGCCGCAATACTTTTCTGGTGCCTGTCTGCCTAAGTCTTTTCTTCTCTGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS TCA 72 bp | TCCAATCTCACTCAGAGTATGATGTGCCAGTTTGACTaGGCCATGGAGAGCCCGGATGTTTGCTCAAACATT | + |
|
Preference number: 6 (lower is better) Translates to: SNLTQSMMCQFD*AMESPDVCSNI Trigger: AATGTTTGAGCAAACATCCGGGCTCTCCATGGCTCAGTCAAACTGGCACATCATACTCTGAGTGAGATTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS TCA 72 bp | TCTCATTTCACAGTGAAGGAGATAGGTGGAGATAGGTaGTGTGACTTGTCCAAGTTGGTGCCAGAGCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SHFTVKEIGGDR*CDLSKLVPELG Trigger: ACCTAGCTCTGGCACCAACTTGGACAAGTCACATCACCTATCTCCACCTATCTCCTTCACTGTGAAATGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
||
| CDS GCA 72 bp | AAATCCAACTCAGAGAAGGATGGCGAGTGGTGTGACTaGAGGTGTAGTACAGAGGGTTCACTCTTAGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: KSNSEKDGEWCD*RCSTEGSLLGN Trigger: ATTTCCTAAGAGTGAACCCTCTGTACTACACCTGCAGTCACACCACTCGCCATCCTTCTCTGAGTTGGATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS GCA 72 bp | ACTATGAAGGTTGCCAGCTGTGAGCAACAAGAGGATTaGAAGAGGAAATCAAAGGACACAGCTTCACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TMKVASCEQQED*KRKSKDTASQV Trigger: CACCTGTGAAGCTGTGTCCTTTGATTTCCTCTTGCAATCCTCTTGTTGCTCACAGCTGGCAACCTTCATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CCA 72 bp | GTGTCAGTCAAGGTGTTTCTCAATGACATTAACATTTaGATCGGAATCCTCGATGGAATGCAGGCGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VSVKVFLNDINI*IGILDGMQAQA Trigger: TGCCTGCGCCTGCATTCCATCGAGGATTCCGATCCAAATGTTAATGTCATTGAGAAACACCTTGACTGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
||
| CDS CCA 72 bp | TCAAGCAAGCCAGATAGCCCACAGACAAATGGGCCATaGAAGAAGAAAACCCTTACAAAAGCAGCACTACCA | + |
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Preference number: 6 (lower is better) Translates to: SSKPDSPQTNGP*KKKTLTKAALP Trigger: TGGTAGTGCTGCTTTTGTAAGGGTTTTCTTCTTCCATGGCCCATTTGTCTGTGGGCTATCTGGCTTGCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CAA 72 bp | TCCTGTTCACTGCTGGCTCCTAGGTTCCTAGAGATGTaGCAAAACCTGCTTGCTTGGAAAAGTCCACATTCT | + |
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Preference number: 6 (lower is better) Translates to: SCSLLAPRFLEM*QNLLAWKSPHS Trigger: AGAATGTGGACTTTTCCAAGCAAGCAGGTTTTGCAACATCTCTAGGAACCTAGGAGCCAGCAGTGAACAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CAA 72 bp | TCATTAGCCCAAGTCATTGAGAGTTCACAGTTGGTATaGCTGAATCATTGCCCAAGTCACTCAGCCTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: SLAQVIESSQLV*LNHCPSHSASG Trigger: TCCGGAGGCTGAGTGACTTGGGCAATGATTCAGCAATACCAACTGTGAACTCTCAATGACTTGGGCTAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658120.1 |
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| CDS CAA 90 bp | TCATTCTTCTCATTAGCCCAAGTCATTGAGAGTTCACAGTTGGTATaGCTGAATCATTGCCCAAGTCACTCAGCCTCCGGAATCCTCGAT | + |
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Preference number: 6 (lower is better) Translates to: SFFSLAQVIESSQLV*LNHCPSHSASGILD Trigger: ATCGAGGATTCCGGAGGCTGAGTGACTTGGGCAATGATTCAGCAATACCAACTGTGAACTCTCAATGACTTGGGCTAATGAGAAGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658120.1 |
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| CDS GCA 72 bp | ATGACATTAACATTTGGATCGGAATCCTCGATGGAATaGAGGCGCAGGCAGCTGAAAGAGATGGTGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: MTLTFGSESSME*RRRQLKEMVQF Trigger: AAATTGCACCATCTCTTTCAGCTGCCTGCGCCTGCATTCCATCGAGGATTCCGATCCAAATGTTAATGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 72 bp | GACGATTCCATGTCAACCACAGCTGCAAATGGAGAGTaGTCATCTCTGAATGATGGGGTTGATAGGAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: DDSMSTTAANGE*SSLNDGVDRKY Trigger: ATACTTCCTATCAACCCCATCATTCAGAGATGACCACTCTCCATTTGCAGCTGTGGTTGACATGGAATCGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CAA 72 bp | AACAACTACATTCACCAAGAGACAATGCCACTCTCCTaGCAAAGCCACTGCATCCACAACAGAGGTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: NNYIHQETMPLS*QSHCIHNRGSV Trigger: AACAGAACCTCTGTTGTGGATGCAGTGGCTTTGCAAGGAGAGTGGCATTGTCTCTTGGTGAATGTAGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427290.1 |
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| CDS CAA 72 bp | TCATTAGCCCAAGTCATTGAGAGTTCACAGTTGGTATaGCTGAATCATTGCCCAAGTCACTCAGCCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SLAQVIESSQLV*LNHCPSHSASV Trigger: CACTGAGGCTGAGTGACTTGGGCAATGATTCAGCAATACCAACTGTGAACTCTCAATGACTTGGGCTAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CAA 90 bp | CATGACTTGAACAACTACATTCACCAAGAGACAATGCCACTCTCCTaGCAAAGCCACTGCATCCACAACAGAGGTTCTGTTTTACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: HDLNNYIHQETMPLS*QSHCIHNRGSVLLK Trigger: CTTCAGTAAAACAGAACCTCTGTTGTGGATGCAGTGGCTTTGCAAGGAGAGTGGCATTGTCTCTTGGTGAATGTAGTTGTTCAAGTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427290.1 |
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| CDS TCA 72 bp | CTGTGTCCTCTCCTCTTCTTAGAAAGATGTATCTTTTaGTTAGTTCCACCCGGAATCCTCGATGGAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: LCPLLFLERCIF*LVPPGILDGMQ Trigger: CTGCATTCCATCGAGGATTCCGGGTGGAACTAATCAAAAGATACATCTTTCTAAGAAGAGGAGAGGACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654472.1 ENST00000663553.1 |
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| CDS TCA 72 bp | ATTTCTGAGGCTCAAAGTGTAGCCCAGAATCATAGCTaGAATCTCTGGGTCTTCCAAAGAGAAGAATCAGCC | + |
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Preference number: 6 (lower is better) Translates to: ISEAQSVAQNHS*NLWVFQREESA Trigger: GGCTGATTCTTCTCTTTGGAAGACCCAGAGATTTCAGCTATGATTCTGGGCTACACTTTGAGCCTCAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 72 bp | CTGGGTCTTCCAAAGAGAAGAATCAGCCTTAATAGTTaGTTAGTGGATATGACTCAAGCAAGCCAGATAGCC | + |
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Preference number: 6 (lower is better) Translates to: LGLPKRRISLNS*LVDMTQASQIA Trigger: GGCTATCTGGCTTGCTTGAGTCATATCCACTAATCAACTATTAAGGCTGATTCTTCTCTTTGGAAGACCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 72 bp | TTTACTGAAGATGGAAAAAGTCAGAAACTTCCTCCCTaGTATTTAGGCCATGTACTGTTGGAAGGGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: FTEDGKSQKLPP*YLGHVLLEGKL Trigger: GAGCTTCCCTTCCAACAGTACATGGCCTAAATACCAGGGAGGAAGTTTCTGACTTTTTCCATCTTCAGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427290.1 |
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| CDS CCA 72 bp | TTCCTGCACTGCTCCAACTTTTATAGCTTCTTCAATTaGCCACTCCATGTAGCTTGGGGCATTAATTACTCT | + |
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Preference number: 6 (lower is better) Translates to: FLHCSNFYSFFN*PLHVAWGINYS Trigger: AGAGTAATTAATGCCCCAAGCTACATGGAGTGGCCAATTGAAGAAGCTATAAAAGTTGGAGCAGTGCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
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| CDS CAA 72 bp | TCTGTGTCCTCTCCTCTTCTTAGAAAGATGTATCTTTaGATTAGTTCCACCCGGAATCCTCGATGGAATGCA | + |
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Preference number: 6 (lower is better) Translates to: SVSSPLLRKMYL*ISSTRNPRWNA Trigger: TGCATTCCATCGAGGATTCCGGGTGGAACTAATCAAAAGATACATCTTTCTAAGAAGAGGAGAGGACACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654472.1 ENST00000663553.1 |
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| CDS CAA 72 bp | TCATTAGCCCAAGTCATTGAGAGTTCACAGTTGGTATaGCTGAATCATTGCCCAAGTCACTCAGCCTCATTT | + |
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Preference number: 6 (lower is better) Translates to: SLAQVIESSQLV*LNHCPSHSASF Trigger: AAATGAGGCTGAGTGACTTGGGCAATGATTCAGCAATACCAACTGTGAACTCTCAATGACTTGGGCTAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654472.1 |
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| CDS TCA 72 bp | ATCCAAAATCATGGTGTCAGTAGAGTTGATTTCTTCTaGAGGATAGGAGGAAGAACTGTCTCATGCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: IQNHGVSRVDFF*RIGGRTVSCLS Trigger: AGAGAGGCATGAGACAGTTCTTCCTCCTATCCTTCAGAAGAAATCAACTCTACTGACACCATGATTTTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654472.1 ENST00000663553.1 |
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| CDS TCA 72 bp | TTTCTCTTAACTACTGAAGGCTCTAATAAAATAATGTaGTCTGTGCCTGAGCCTGAAGACAGCTGTCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: FLLTTEGSNKIM*SVPEPEDSCLG Trigger: TCCGAGACAGCTGTCTTCAGGCTCAGGCACAGATCACATTATTTTATTAGAGCCTTCAGTAGTTAAGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
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| CDS TCA 72 bp | GACCTGAGTTCCGGACAATTGCAGCTAAGGGTGAAATaGAGCCAGGTAAATACTGTTGTGACTATATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: DLSSGQLQLRVK*SQVNTVVTIFL Trigger: CAAAAATATAGTCACAACAGTATTTACCTGGCTTCATTTCACCCTTAGCTGCAATTGTCCGGAACTCAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS TCA 72 bp | TGCTCCCCAACCCGTCAGATCATATTGGATGTGACTTaGCATAAGATCATGAGACTTGAAAATCATATCCCT | + |
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Preference number: 6 (lower is better) Translates to: CSPTRQIILDVT*HKIMRLENHIP Trigger: AGGGATATGATTTTCAAGTCTCATGATCTTATGTCAAGTCACATCCAATATGATCTGACGGGTTGGGGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CCA 72 bp | TTTTATAGCTTCTTCAATTGGCCACTCCATGTAGCTTaGGGCATTAATTACTCTGCACCCTTCATTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: FYSFFNWPLHVA*GINYSAPFIWK Trigger: CTTCCAAATGAAGGGTGCAGAGTAATTAATGCCCCAAGCTACATGGAGTGGCCAATTGAAGAAGCTATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
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| CDS CCA 72 bp | TGTACAGATAAACAGTGGTATACCAAGGATGGAGGATaGGGAGAGTTGTCCATCAAGGTGAGGAATATTTTA | + |
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Preference number: 6 (lower is better) Translates to: CTDKQWYTKDGG*GELSIKVRNIL Trigger: TAAAATATTCCTCACCTTGATGGACAACTCTCCCCATCCTCCATCCTTGGTATACCACTGTTTATCTGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS CAA 72 bp | TGTAAGAAACTAGAACTTGGCCCTCATGGCTTCAGTTaGGACTGGTTTGAATTGGGTTGTCAATTTAATTGC | + |
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Preference number: 6 (lower is better) Translates to: CKKLELGPHGFS*DWFELGCQFNC Trigger: GCAATTAAATTGACAACCCAATTCAAACCAGTCCAAACTGAAGCCATGAGGGCCAAGTTCTAGTTTCTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659549.1 |
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| CDS GCA 72 bp | TTAAAATTCTCCATGACATTGCACATCGTTATTTCTTaGATTCAAGGCAAAGCACTCCAACCTCCTTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: LKFSMTLHIVIS*IQGKALQPPLV Trigger: TACCAAAGGAGGTTGGAGTGCTTTGCCTTGAATGCAAGAAATAACGATGTGCAATGTCATGGAGAATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658120.1 ENST00000659549.1 |
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