Pregenerated sensors for LINC02883 (Homo sapiens)

Ensembl gene IDs: ENSG00000259416

Ensembl transcript IDs: ENST00000557908.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GCTCAGCTGAGGGAGCCAAGCACATGGGCTGCAAAGATCTGGCCTTaGTCCCGGAGCAGAGCTCACACTACTGCTGGGAGGAGGAGACAG	+
Preference number: 5 (lower is better) Translates to: AQLREPSTWAAKIWP*SRSRAHTTAGRRRQ Trigger: CTGTCTCCTCCTCCCAGCAGTAGTGTGAGCTCTGCTCCGGGATCAAGGCCAGATCTTTGCAGCCCATGTGCTTGGCTCCCTCAGCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS TCA 90 bp	CACGCTGCACAGCACAAACTGAGGACCCACGTCCTGAGGCTCAGCTaGGGGAGCCAAGCACATGGGCTGCAAAGATCTGGCCTTGATCCC	+
Preference number: 5 (lower is better) Translates to: HAAQHKLRTHVLRLS*GSQAHGLQRSGLDP Trigger: GGGATCAAGGCCAGATCTTTGCAGCCCATGTGCTTGGCTCCCTCAGCTGAGCCTCAGGACGTGGGTCCTCAGTTTGTGCTGTGCAGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS TCA 90 bp	GGGCCACCAAGTAGAAGAAAAGCTGCTGTTTGCACCCAGCTGGCTTaGCTGCAGTGTGGCCCCTCACGCTGCACAGCACAAACTGAGGAC	+
Preference number: 5 (lower is better) Translates to: GPPSRRKAAVCTQLA*LQCGPSRCTAQTED Trigger: GTCCTCAGTTTGTGCTGTGCAGCGTGAGGGGCCACACTGCAGTCAAGCCAGCTGGGTGCAAACAGCAGCTTTTCTTCTACTTGGTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CCA 90 bp	AAGGAGGGCCACCAAGTAGAAGAAAAGCTGCTGTTTGCACCCAGCTaGCTTGACTGCAGTGTGGCCCCTCACGCTGCACAGCACAAACTG	+
Preference number: 5 (lower is better) Translates to: KEGHQVEEKLLFAPS*LDCSVAPHAAQHKL Trigger: CAGTTTGTGCTGTGCAGCGTGAGGGGCCACACTGCAGTCAAGCCAGCTGGGTGCAAACAGCAGCTTTTCTTCTACTTGGTGGCCCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CCA 90 bp	GCGTTGAGGAAGCTCACAGGAGCCAATGTGAAGAAAGTGCGGCCATaGAGGAGTCATCCGTGGCACTCGCTCTCAGAGCCTGCATTTATC	+
Preference number: 5 (lower is better) Translates to: ALRKLTGANVKKVRP*RSHPWHSLSEPAFI Trigger: GATAAATGCAGGCTCTGAGAGCGAGTGCCACGGATGACTCCTCCATGGCCGCACTTTCTTCACATTGGCTCCTGTGAGCTTCCTCAACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS GCA 90 bp	CAACCCAGGAGTGTCTGGAAGCTTCTCTGCGTACCAGAGCAACGCTaGTCATCTCCTTTACCTGCAGAAAGGACAGGAAAGGAGTCCAGC	+
Preference number: 5 (lower is better) Translates to: QPRSVWKLLCVPEQR*SSPLPAERTGKESS Trigger: GCTGGACTCCTTTCCTGTCCTTTCTGCAGGTAAAGGAGATGAGCAGCGTTGCTCTGGTACGCAGAGAAGCTTCCAGACACTCCTGGGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CCA 90 bp	ACAGGAGCCAATGTGAAGAAAGTGCGGCCATGGAGGAGTCATCCGTaGCACTCGCTCTCAGAGCCTGCATTTATCCTGGAAATGGCTTTG	+
Preference number: 5 (lower is better) Translates to: TGANVKKVRPWRSHP*HSLSEPAFILEMAL Trigger: CAAAGCCATTTCCAGGATAAATGCAGGCTCTGAGAGCGAGTGCCACGGATGACTCCTCCATGGCCGCACTTTCTTCACATTGGCTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CCA 90 bp	TTTATCCTGGAAATGGCTTTGGAGCCCTGGGTCCTGGCATGGAGCTaGTGCCCATCAGTAGAATTACTTAATCTATCGTGCAACCCAGGA	+
Preference number: 5 (lower is better) Translates to: FILEMALEPWVLAWS*CPSVELLNLSCNPG Trigger: TCCTGGGTTGCACGATAGATTAAGTAATTCTACTGATGGGCACCAGCTCCATGCCAGGACCCAGGGCTCCAAAGCCATTTCCAGGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CCA 72 bp	AGGGACCTCGCAGGCCTCAACGTTCACTCTGCAGAGTaGACAGAAGCGGGGCCAGCTTCGAAAGCGTTGAGG	+
Preference number: 6 (lower is better) Translates to: RDLAGLNVHSAE*TEAGPASKALR Trigger: CCTCAACGCTTTCGAAGCTGGCCCCGCTTCTGTCCACTCTGCAGAGTGAACGTTGAGGCCTGCGAGGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CAA 90 bp	GGCTCAGCTGAGGGAGCCAAGCACATGGGCTGCAAAGATCTGGCCTaGATCCCGGAGCAGAGCTCACACTACTGCTGGGAGGAGGAGACA	+
Preference number: 6 (lower is better) Translates to: GSAEGAKHMGCKDLA*IPEQSSHYCWEEET Trigger: TGTCTCCTCCTCCCAGCAGTAGTGTGAGCTCTGCTCCGGGATCAAGGCCAGATCTTTGCAGCCCATGTGCTTGGCTCCCTCAGCTGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS TCA 72 bp	CAGCACAAACTGAGGACCCACGTCCTGAGGCTCAGCTaGGGGAGCCAAGCACATGGGCTGCAAAGATCTGGC	+
Preference number: 6 (lower is better) Translates to: QHKLRTHVLRLS*GSQAHGLQRSG Trigger: GCCAGATCTTTGCAGCCCATGTGCTTGGCTCCCTCAGCTGAGCCTCAGGACGTGGGTCCTCAGTTTGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CAA 90 bp	GTTCACTCTGCAGAGTGGACAGAAGCGGGGCCAGCTTCGAAAGCGTaGAGGAAGCTCACAGGAGCCAATGTGAAGAAAGTGCGGCCATGG	+
Preference number: 6 (lower is better) Translates to: VHSAEWTEAGPASKA*RKLTGANVKKVRPW Trigger: CCATGGCCGCACTTTCTTCACATTGGCTCCTGTGAGCTTCCTCAACGCTTTCGAAGCTGGCCCCGCTTCTGTCCACTCTGCAGAGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CCA 72 bp	AAGCTCACAGGAGCCAATGTGAAGAAAGTGCGGCCATaGAGGAGTCATCCGTGGCACTCGCTCTCAGAGCCT	+
Preference number: 6 (lower is better) Translates to: KLTGANVKKVRP*RSHPWHSLSEP Trigger: AGGCTCTGAGAGCGAGTGCCACGGATGACTCCTCCATGGCCGCACTTTCTTCACATTGGCTCCTGTGAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CCA 72 bp	CACCAAGTAGAAGAAAAGCTGCTGTTTGCACCCAGCTaGCTTGACTGCAGTGTGGCCCCTCACGCTGCACAG	+
Preference number: 6 (lower is better) Translates to: HQVEEKLLFAPS*LDCSVAPHAAQ Trigger: CTGTGCAGCGTGAGGGGCCACACTGCAGTCAAGCCAGCTGGGTGCAAACAGCAGCTTTTCTTCTACTTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS TCA 72 bp	AGTAGAAGAAAAGCTGCTGTTTGCACCCAGCTGGCTTaGCTGCAGTGTGGCCCCTCACGCTGCACAGCACAA	+
Preference number: 6 (lower is better) Translates to: SRRKAAVCTQLA*LQCGPSRCTAQ Trigger: TTGTGCTGTGCAGCGTGAGGGGCCACACTGCAGTCAAGCCAGCTGGGTGCAAACAGCAGCTTTTCTTCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CAA 72 bp	GCAGAGTGGACAGAAGCGGGGCCAGCTTCGAAAGCGTaGAGGAAGCTCACAGGAGCCAATGTGAAGAAAGTG	+
Preference number: 6 (lower is better) Translates to: AEWTEAGPASKA*RKLTGANVKKV Trigger: CACTTTCTTCACATTGGCTCCTGTGAGCTTCCTCAACGCTTTCGAAGCTGGCCCCGCTTCTGTCCACTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS GCA 72 bp	TCTATCGTGCAACCCAGGAGTGTCTGGAAGCTTCTCTaGGTACCAGAGCAACGCTGCTCATCTCCTTTACCT	+
Preference number: 6 (lower is better) Translates to: SIVQPRSVWKLL*VPEQRCSSPLP Trigger: AGGTAAAGGAGATGAGCAGCGTTGCTCTGGTACGCAGAGAAGCTTCCAGACACTCCTGGGTTGCACGATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS CCA 72 bp	AATGTGAAGAAAGTGCGGCCATGGAGGAGTCATCCGTaGCACTCGCTCTCAGAGCCTGCATTTATCCTGGAA	+
Preference number: 6 (lower is better) Translates to: NVKKVRPWRSHP*HSLSEPAFILE Trigger: TTCCAGGATAAATGCAGGCTCTGAGAGCGAGTGCCACGGATGACTCCTCCATGGCCGCACTTTCTTCACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS GCA 72 bp	AGTGTCTGGAAGCTTCTCTGCGTACCAGAGCAACGCTaGTCATCTCCTTTACCTGCAGAAAGGACAGGAAAG	+
Preference number: 6 (lower is better) Translates to: SVWKLLCVPEQR*SSPLPAERTGK Trigger: CTTTCCTGTCCTTTCTGCAGGTAAAGGAGATGAGCAGCGTTGCTCTGGTACGCAGAGAAGCTTCCAGACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2
CDS GCA 72 bp	AGCTGGTGCCCATCAGTAGAATTACTTAATCTATCGTaGAACCCAGGAGTGTCTGGAAGCTTCTCTGCGTAC	+
Preference number: 6 (lower is better) Translates to: SWCPSVELLNLS*NPGVSGSFSAY Trigger: GTACGCAGAGAAGCTTCCAGACACTCCTGGGTTGCACGATAGATTAAGTAATTCTACTGATGGGCACCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557908.2