Pregenerated sensors for LINC02882 (Homo sapiens)
Ensembl gene IDs: ENSG00000251138Ensembl transcript IDs: ENST00000515416.7, ENST00000549905.5, ENST00000551210.1, ENST00000551726.2, ENST00000653134.1, ENST00000656876.1, ENST00000658677.1, ENST00000658833.1, ENST00000662107.1, ENST00000663261.1, ENST00000665895.1, ENST00000665907.1, ENST00000668228.1, ENST00000668665.1, ENST00000668997.1, ENST00000669556.1, ENST00000670471.1, ENST00000670573.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGAGTATCTGGCTCCAGCACGTGGCTCCTGGGCTGGCCCAGCTCTaGCTCCACTTCCTGTCACATGGGACTGCCACTCAGCGCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: QSIWLQHVAPGLAQL*LHFLSHGTATQRQW Trigger: CCACTGGCGCTGAGTGGCAGTCCCATGTGACAGGAAGTGGAGGCAGAGCTGGGCCAGCCCAGGAGCCACGTGCTGGAGCCAGATACTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000551726.2 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 90 bp | GGACTGCCACTCAGCGCCAGTGGAGGATGGAAGATGGGAGGGCTGTaGTGTTACAGCAGCATCTTTGGCACCTGCTGTTCGGCAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GLPLSASGGWKMGGL*CYSSIFGTCCSAGL Trigger: GAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCACTGGCGCTGAGTGGCAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000551726.2 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 90 bp | CCTGTCACATGGGACTGCCACTCAGCGCCAGTGGAGGATGGAAGATaGGAGGGCTGTGGTGTTACAGCAGCATCTTTGGCACCTGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: PVTWDCHSAPVEDGR*EGCGVTAASLAPAV Trigger: AACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCACTGGCGCTGAGTGGCAGTCCCATGTGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000551726.2 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 90 bp | TGGAGGATGGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTTaGCACCTGCTGTTCGGCAGGTCTCAGGTTCTTGTTCGGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: WRMEDGRAVVLQQHL*HLLFGRSQVLVRGS Trigger: AGATCCCCGAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000668228.1 ENST00000670471.1 |
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| CDS CCA 90 bp | TGGAGGATGGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTTaGCACCTGCTGTTCGGCAGGTCTCAGGTTCTTGTTAGTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: WRMEDGRAVVLQQHL*HLLFGRSQVLVSPG Trigger: TCCAGGACTAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551726.2 |
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| CDS CCA 90 bp | TGGAGGATGGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTTaGCACCTGCTGTTCGGCAGGTCTCAGGTTCTTGTTCTCTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: WRMEDGRAVVLQQHL*HLLFGRSQVLVLSN Trigger: GTTGGAGAGAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668665.1 |
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| CDS CCA 90 bp | CGCCCTCATGATTCAATCATCTCCCACTGGGTCCCTCCCACAACATaGGAGGATTATGGGAGCTACAAGATGAGATTTGGGTGGGGACAC | + |
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Preference number: 5 (lower is better) Translates to: RPHDSIISHWVPPTT*EDYGSYKMRFGWGH Trigger: GTGTCCCCACCCAAATCTCATCTTGTAGCTCCCATAATCCTCCCATGTTGTGGGAGGGACCCAGTGGGAGATGATTGAATCATGAGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000515416.7 ENST00000551726.2 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 90 bp | TGGAGGATGGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTTaGCACCTGCTGTTCGGCAGGTCTCAGGTTCTTGTTTTTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: WRMEDGRAVVLQQHL*HLLFGRSQVLVFPW Trigger: CCAAGGAAAAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670573.1 |
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| CDS GCA 90 bp | TGGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTTGGCACCTaGTGTTCGGCAGGTCTCAGGTTCTTGTTTTTCCTTGGAATCCTC | + |
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Preference number: 5 (lower is better) Translates to: WKMGGLWCYSSIFGT*CSAGLRFLFFLGIL Trigger: GAGGATTCCAAGGAAAAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670573.1 |
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| CDS CCA 90 bp | TGGAGGATGGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTTaGCACCTGCTGTTCGGCAGGTCTCAGGTTCTTGTTAACAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: WRMEDGRAVVLQQHL*HLLFGRSQVLVNRY Trigger: ATACCTGTTAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663261.1 |
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| CDS TCA 90 bp | TCACATGAATGGGATCATGAACAGCATGAGAAAGACCCGCCCTCATaGTTCAATCATCTCCCACTGGGTCCCTCCCACAACATGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: SHEWDHEQHEKDPPS*FNHLPLGPSHNMGG Trigger: TCCTCCCATGTTGTGGGAGGGACCCAGTGGGAGATGATTGAATCATGAGGGCGGGTCTTTCTCATGCTGTTCATGATCCCATTCATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000515416.7 ENST00000551726.2 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 90 bp | TACCATGTGAGGGTCCTTGTTACCACCTGGAGAGAAGGAATGTCTTaGTACCCAATTCAGCCTTCTCTGACACCAGCCATGATCTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: YHVRVLVTTWREGMS*YPIQPSLTPAMILG Trigger: ACCCAAGATCATGGCTGGTGTCAGAGAAGGCTGAATTGGGTACCAAGACATTCCTTCTCTCCAGGTGGTAACAAGGACCCTCACATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653134.1 ENST00000662107.1 ENST00000663261.1 ENST00000665907.1 ENST00000669556.1 |
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| CDS GCA 90 bp | TTGGTACCCAATTCAGCCTTCTCTGACACCAGCCATGATCTTGGGTaGTGGTTAGGCCTTCTATGTAAGTCTTCTTCCCCTATGTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LVPNSAFSDTSHDLG*WLGLLCKSSSPMSD Trigger: ATCTGACATAGGGGAAGAAGACTTACATAGAAGGCCTAACCAGCACCCAAGATCATGGCTGGTGTCAGAGAAGGCTGAATTGGGTACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653134.1 ENST00000662107.1 ENST00000663261.1 ENST00000665907.1 ENST00000669556.1 |
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| CDS CCA 90 bp | GTACCCAATTCAGCCTTCTCTGACACCAGCCATGATCTTGGGTGCTaGTTAGGCCTTCTATGTAAGTCTTCTTCCCCTATGTCAGATGAT | + |
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Preference number: 5 (lower is better) Translates to: VPNSAFSDTSHDLGC*LGLLCKSSSPMSDD Trigger: ATCATCTGACATAGGGGAAGAAGACTTACATAGAAGGCCTAACCAGCACCCAAGATCATGGCTGGTGTCAGAGAAGGCTGAATTGGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653134.1 ENST00000662107.1 ENST00000663261.1 ENST00000665907.1 ENST00000669556.1 |
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| CDS GCA 90 bp | CTGAGGATAATGGCTTCCAGCTCCATCCATGTACATGATCTTGGGTaGTGGTTAGGCCTTCTATGTAAGTCTTCTTCCCCTATGTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LRIMASSSIHVHDLG*WLGLLCKSSSPMSD Trigger: ATCTGACATAGGGGAAGAAGACTTACATAGAAGGCCTAACCAGCACCCAAGATCATGTACATGGATGGAGCTGGAAGCCATTATCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549905.5 |
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| CDS GCA 90 bp | GAAAGTGGAAGCGAAGTGATAAACATTAAGGTAGGGCTGTTCCATTaGTGGTCAGGCGTGATGCTTGGTGTCCTCTATGACTTTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: ESGSEVINIKVGLFH*WSGVMLGVLYDFQF Trigger: GAACTGAAAGTCATAGAGGACACCAAGCATCACGCCTGACCAGCAATGGAACAGCCCTACCTTAATGTTTATCACTTCGCTTCCACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670573.1 |
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| CDS CCA 90 bp | AGAGATTGGCCTTGGCTGGGTGGTTCTTGCTCCGGGTTTCTCATGTaGTTGCAGATAATGAGTAACATCATTCTAAGGAGTTCTCTCACA | + |
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Preference number: 5 (lower is better) Translates to: RDWPWLGGSCSGFLM*LQIMSNIILRSSLT Trigger: TGTGAGAGAACTCCTTAGAATGATGTTACTCATTATCTGCAACCACATGAGAAACCCGGAGCAAGAACCACCCAGCCAAGGCCAATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551210.1 |
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| CDS CCA 90 bp | AGTGGAAGCGAAGTGATAAACATTAAGGTAGGGCTGTTCCATTGCTaGTCAGGCGTGATGCTTGGTGTCCTCTATGACTTTCAGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SGSEVINIKVGLFHC*SGVMLGVLYDFQFS Trigger: AGAGAACTGAAAGTCATAGAGGACACCAAGCATCACGCCTGACCAGCAATGGAACAGCCCTACCTTAATGTTTATCACTTCGCTTCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670573.1 |
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| CDS TCA 90 bp | ACATGGCTTGGGAGGCTTCAAGAAATTTACAATCATGGTACAAGGTaGAGGGGAAACAAGGTACATCTTACATGGTGGCAGGAGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: TWLGRLQEIYNHGTR*RGNKVHLTWWQERE Trigger: CTCTCTCTCCTGCCACCATGTAAGATGTACCTTGTTTCCCCTTCACCTTGTACCATGATTGTAAATTTCTTGAAGCCTCCCAAGCCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663261.1 ENST00000665907.1 |
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| CDS CCA 90 bp | AGGATAATGGCTTCCAGCTCCATCCATGTACATGATCTTGGGTGCTaGTTAGGCCTTCTATGTAAGTCTTCTTCCCCTATGTCAGATGAT | + |
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Preference number: 5 (lower is better) Translates to: RIMASSSIHVHDLGC*LGLLCKSSSPMSDD Trigger: ATCATCTGACATAGGGGAAGAAGACTTACATAGAAGGCCTAACCAGCACCCAAGATCATGTACATGGATGGAGCTGGAAGCCATTATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549905.5 |
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| CDS CCA 90 bp | ATCCTGCTACAAGCATCTCTATGCATGGGTCCTGATATGCTCCTATaGGCAATTCACTCAAGGCTGGAATTGTTTGTTTATCGGGTATGG | + |
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Preference number: 5 (lower is better) Translates to: ILLQASLCMGPDMLL*AIHSRLELFVYRVW Trigger: CCATACCCGATAAACAAACAATTCCAGCCTTGAGTGAATTGCCCATAGGAGCATATCAGGACCCATGCATAGAGATGCTTGTAGCAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000668665.1 ENST00000670471.1 |
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| CDS TCA 90 bp | ATTAACCAGTGCTATACAAATCCAAACACCTATGTAAGACATGGCTaGGCACATAATGACCCAGACACTTGCCTGCTTCAATCCTCGCAC | + |
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Preference number: 5 (lower is better) Translates to: INQCYTNPNTYVRHG*AHNDPDTCLLQSSH Trigger: GTGCGAGGATTGAAGCAGGCAAGTGTCTGGGTCATTATGTGCTCAGCCATGTCTTACATAGGTGTTTGGATTTGTATAGCACTGGTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658677.1 ENST00000668665.1 ENST00000670471.1 |
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| CDS CCA 90 bp | TCAATTTACAAAAGAAAGAGGTTTAATTGGACTCACAGTTCCACATaGCTAGGGAGGCCTCACAATCATAGCAGAAGGCAAGGAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SIYKRKRFNWTHSST*LGRPHNHSRRQGEA Trigger: TGCTTCTCCTTGCCTTCTGCTATGATTGTGAGGCCTCCCTAGCCATGTGGAACTGTGAGTCCAATTAAACCTCTTTCTTTTGTAAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000515416.7 ENST00000658833.1 |
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| CDS TCA 90 bp | GAAGTCAAGCAGAAATTCAAACATTTGGTCTTCATTAATACCATGTaGGGGTCCTTGTTACCACCTGGAGAGAAGGAATGTCTTGGTACC | + |
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Preference number: 5 (lower is better) Translates to: EVKQKFKHLVFINTM*GSLLPPGEKECLGT Trigger: GGTACCAAGACATTCCTTCTCTCCAGGTGGTAACAAGGACCCTCACATGGTATTAATGAAGACCAAATGTTTGAATTTCTGCTTGACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000549905.5 ENST00000653134.1 ENST00000662107.1 ENST00000663261.1 ENST00000665907.1 ENST00000669556.1 |
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| CDS TCA 90 bp | GTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAAATACCATTTaGCCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATTA | + |
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Preference number: 5 (lower is better) Translates to: VSVEIPQGSRTRNTI*PSHPITGYIPKGLL Trigger: TAATAATCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS CCA 90 bp | AAAACGACACCTTTATTTATGATTATCTTTCAAAGTTCTAGAGATTaGCCTTGGCTGGGTGGTTCTTGCTCCGGGTTTCTCATGTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: KTTPLFMIIFQSSRD*PWLGGSCSGFLMWL Trigger: CAACCACATGAGAAACCCGGAGCAAGAACCACCCAGCCAAGGCCAATCTCTAGAACTTTGAAAGATAATCATAAATAAAGGTGTCGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551210.1 |
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| CDS CCA 90 bp | TGTTGGTTGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTaGAGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: CWLDCKLVQPLWKSV*RFLRDLELEIPFDP Trigger: TGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCAACCAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS TCA 90 bp | GAAACTCCCATTTTTAACACCATCAGATCTTGTGAGACCCATTCATaGTCACATGGGTCTTTCTCACATGAATGGGATCATGAACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: ETPIFNTIRSCETHS*SHGSFSHEWDHEQH Trigger: ATGCTGTTCATGATCCCATTCATGTGAGAAAGACCCATGTGATCATGAATGGGTCTCACAAGATCTGATGGTGTTAAAAATGGGAGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000515416.7 ENST00000551726.2 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 90 bp | TTATACTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTaGTTGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LYWRGCGEIGTLLHC*LDCKLVQPLWKSVW Trigger: CCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCAACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGTATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS CCA 90 bp | GAGAGAGACAATGATGCCAGGTCTCAAATTAGCCTGTGTGGAGATTaGTTTTATCATGTCCCACATAAATCATCCAGAGTTGCAAACAAA | + |
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Preference number: 5 (lower is better) Translates to: ERDNDARSQISLCGD*FYHVPHKSSRVANK Trigger: TTTGTTTGCAACTCTGGATGATTTATGTGGGACATGATAAAACCAATCTCCACACAGGCTAATTTGAGACCTGGCATCATTGTCTCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658677.1 ENST00000668665.1 ENST00000670471.1 |
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| CDS CCA 90 bp | GATGAACACAGAGGTAGCATGATAATGGAAGATTTCCACATCTTCTaGAGTGCTGCTGTTAAGAGAGACTCTTCTTTCACATCCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: DEHRGSMIMEDFHIF*SAAVKRDSSFTSFF Trigger: AAAGAAGGATGTGAAAGAAGAGTCTCTCTTAACAGCAGCACTCCAGAAGATGTGGAAATCTTCCATTATCATGCTACCTCTGTGTTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669556.1 |
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| CDS CCA 90 bp | ACACTTTTACACTGTTGGTTGGACTGTAAACTAGTTCAACCATTGTaGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: TLLHCWLDCKLVQPL*KSVWRFLRDLELEI Trigger: TATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCAACCAACAGTGTAAAAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS TCA 90 bp | TTGAATGTACAGAAGCCTAAAGTAAATGCACTCACAATTAGGATTTaGTCTGCCTCATTTGTGGTTGCAAGATTAAGACTGCTTACCTGC | + |
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Preference number: 5 (lower is better) Translates to: LNVQKPKVNALTIRI*SASFVVARLRLLTC Trigger: GCAGGTAAGCAGTCTTAATCTTGCAACCACAAATGAGGCAGATCAAATCCTAATTGTGAGTGCATTTACTTTAGGCTTCTGTACATTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS TCA 90 bp | TTTTGGCGATCAATAAAGAACTTCCATAATAATGGGCTGTTAATTTaGGATAGTCCTGGAGGCTGTAAGTCCAAGATCAAGCTCTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: FWRSIKNFHNNGLLI*DSPGGCKSKIKLLA Trigger: TGCTAAGAGCTTGATCTTGGACTTACAGCCTCCAGGACTATCTCAAATTAACAGCCCATTATTATGGAAGTTCTTTATTGATCGCCAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656876.1 ENST00000658833.1 ENST00000665895.1 ENST00000670573.1 |
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| CDS TCA 90 bp | CTGTTAAGAGAGACTCTTCTTTCACATCCTTCTTTTTACCTCCAATaGCATGGTACTGAATGCTCTGTATTCACTTATCTGCAGAGGATA | + |
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Preference number: 5 (lower is better) Translates to: LLRETLLSHPSFYLQ*HGTECSVFTYLQRI Trigger: TATCCTCTGCAGATAAGTGAATACAGAGCATTCAGTACCATGTCATTGGAGGTAAAAAGAAGGATGTGAAAGAAGAGTCTCTCTTAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669556.1 |
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| CDS GCA 90 bp | ATGTCTTCCTGGTTAATTTACCCTTTAATCATTAATGATCTTGGGTaGTGGTTAGGCCTTCTATGTAAGTCTTCTTCCCCTATGTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: MSSWLIYPLIINDLG*WLGLLCKSSSPMSD Trigger: ATCTGACATAGGGGAAGAAGACTTACATAGAAGGCCTAACCAGCACCCAAGATCATTAATGATTAAAGGGTAAATTAACCAGGAAGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656876.1 |
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| CDS CCA 90 bp | TCTTCCTGGTTAATTTACCCTTTAATCATTAATGATCTTGGGTGCTaGTTAGGCCTTCTATGTAAGTCTTCTTCCCCTATGTCAGATGAT | + |
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Preference number: 5 (lower is better) Translates to: SSWLIYPLIINDLGC*LGLLCKSSSPMSDD Trigger: ATCATCTGACATAGGGGAAGAAGACTTACATAGAAGGCCTAACCAGCACCCAAGATCATTAATGATTAAAGGGTAAATTAACCAGGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656876.1 |
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| CDS CCA 90 bp | TTAGCAGAATTACCTTTGCTCATCAACTTGAGAAAAAGCCATAAGTaGTTCACTTTGAATGTACAGAAGCCTAAAGTAAATGCACTCACA | + |
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Preference number: 5 (lower is better) Translates to: LAELPLLINLRKSHK*FTLNVQKPKVNALT Trigger: TGTGAGTGCATTTACTTTAGGCTTCTGTACATTCAAAGTGAACCACTTATGGCTTTTTCTCAAGTTGATGAGCAAAGGTAATTCTGCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS CCA 90 bp | AATGGAATTAAAAATGTAACTTACCTCACTGGACCTGTGACTTCATaGATAAAATGTTCAGTTATGGATCAATATGCTGCGATCAATCCC | + |
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Preference number: 5 (lower is better) Translates to: NGIKNVTYLTGPVTS*IKCSVMDQYAAINP Trigger: GGGATTGATCGCAGCATATTGATCCATAACTGAACATTTTATCCATGAAGTCACAGGTCCAGTGAGGTAAGTTACATTTTTAATTCCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668665.1 |
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| CDS GCA 72 bp | GGCCCAGCTCTGCCTCCACTTCCTGTCACATGGGACTaGCACTCAGCGCCAGTGGAGGATGGAAGATGGGAG | + |
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Preference number: 6 (lower is better) Translates to: GPALPPLPVTWD*HSAPVEDGRWE Trigger: CTCCCATCTTCCATCCTCCACTGGCGCTGAGTGGCAGTCCCATGTGACAGGAAGTGGAGGCAGAGCTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000551726.2 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS GCA 72 bp | GGAGGTGAAGGTTGCAGTGAGCTGAGGTCACGCCCCTaGACTCCATCACTCCATCCTGGGCAACAAGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: GGEGCSELRSRP*TPSLHPGQQER Trigger: TCGCTCTTGTTGCCCAGGATGGAGTGATGGAGTGCAGGGGCGTGACCTCAGCTCACTGCAACCTTCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000668665.1 ENST00000670471.1 |
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| CDS CCA 72 bp | CTCAGCGCCAGTGGAGGATGGAAGATGGGAGGGCTGTaGTGTTACAGCAGCATCTTTGGCACCTGCTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: LSASGGWKMGGL*CYSSIFGTCCS Trigger: CGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCACTGGCGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000551726.2 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 72 bp | CACTTCCTGTCACATGGGACTGCCACTCAGCGCCAGTaGAGGATGGAAGATGGGAGGGCTGTGGTGTTACAG | + |
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Preference number: 6 (lower is better) Translates to: HFLSHGTATQRQ*RMEDGRAVVLQ Trigger: CTGTAACACCACAGCCCTCCCATCTTCCATCCTCCACTGGCGCTGAGTGGCAGTCCCATGTGACAGGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000551726.2 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CAA 90 bp | GTGGAGGATGGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTaGGCACCTGCTGTTCGGCAGGTCTCAGGTTCTTGTTCGGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VEDGRWEGCGVTAAS*APAVRQVSGSCSGI Trigger: GATCCCCGAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000668228.1 ENST00000670471.1 |
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| CDS GCA 72 bp | GGAGGGCTGTGGTGTTACAGCAGCATCTTTGGCACCTaGTGTTCGGCAGGTCTCAGGTTCTTGTTCGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GGLWCYSSIFGT*CSAGLRFLFGD Trigger: ATCCCCGAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000668228.1 ENST00000670471.1 |
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| CDS GCA 72 bp | GGAGGGCTGTGGTGTTACAGCAGCATCTTTGGCACCTaGTGTTCGGCAGGTCTCAGGTTCTTGTTAGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGLWCYSSIFGT*CSAGLRFLLVL Trigger: CAGGACTAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551726.2 |
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| CDS GCA 72 bp | GGAGGGCTGTGGTGTTACAGCAGCATCTTTGGCACCTaGTGTTCGGCAGGTCTCAGGTTCTTGTTCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGLWCYSSIFGT*CSAGLRFLFSP Trigger: TGGAGAGAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668665.1 |
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| CDS CCA 72 bp | CTCCCACTGGGTCCCTCCCACAACATGGGAGGATTATaGGAGCTACAAGATGAGATTTGGGTGGGGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: LPLGPSHNMGGL*ELQDEIWVGTQ Trigger: CTGTGTCCCCACCCAAATCTCATCTTGTAGCTCCCATAATCCTCCCATGTTGTGGGAGGGACCCAGTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000515416.7 ENST00000551726.2 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CAA 72 bp | GGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTaGGCACCTGCTGTTCGGCAGGTCTCAGGTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GRWEGCGVTAAS*APAVRQVSGSC Trigger: ACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000551726.2 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CAA 90 bp | GTGGAGGATGGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTaGGCACCTGCTGTTCGGCAGGTCTCAGGTTCTTGTTCTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VEDGRWEGCGVTAAS*APAVRQVSGSCSLQ Trigger: TTGGAGAGAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668665.1 |
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| CDS GCA 72 bp | GGAGGGCTGTGGTGTTACAGCAGCATCTTTGGCACCTaGTGTTCGGCAGGTCTCAGGTTCTTGTTAACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGLWCYSSIFGT*CSAGLRFLLTG Trigger: ACCTGTTAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663261.1 |
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| CDS CAA 90 bp | GTGGAGGATGGAAGATGGGAGGGCTGTGGTGTTACAGCAGCATCTTaGGCACCTGCTGTTCGGCAGGTCTCAGGTTCTTGTTTTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VEDGRWEGCGVTAAS*APAVRQVSGSCFSL Trigger: CAAGGAAAAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCCCATCTTCCATCCTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670573.1 |
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| CDS TCA 72 bp | TGGGATCATGAACAGCATGAGAAAGACCCGCCCTCATaGTTCAATCATCTCCCACTGGGTCCCTCCCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: WDHEQHEKDPPS*FNHLPLGPSHN Trigger: GTTGTGGGAGGGACCCAGTGGGAGATGATTGAATCATGAGGGCGGGTCTTTCTCATGCTGTTCATGATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000515416.7 ENST00000551726.2 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS GCA 72 bp | GGAGGGCTGTGGTGTTACAGCAGCATCTTTGGCACCTaGTGTTCGGCAGGTCTCAGGTTCTTGTTTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GGLWCYSSIFGT*CSAGLRFLFFL Trigger: AAGGAAAAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGATGCTGCTGTAACACCACAGCCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670573.1 |
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| CDS CCA 72 bp | CAACTCAGTTGCCTGGATTTCATCACAGCTCATGGTTaGTTTCCAGGACAAGCATCTGACGGCCTTGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QLSCLDFITAHG*FPGQASDGLAS Trigger: AGACGCAAGGCCGTCAGATGCTTGTCCTGGAAACCAACCATGAGCTGTGATGAAATCCAGGCAACTGAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000515416.7 ENST00000549905.5 ENST00000551210.1 ENST00000662107.1 ENST00000665907.1 ENST00000669556.1 |
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| CDS CCA 72 bp | AGAAGGCAAGGAGAAGCAAGTCACATCCTTTGTGAATaGCAGCAGGCAGAGAGCTTGTGCAGAGAAACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRQGEASHILCE*QQAESLCRETP Trigger: GGGAGTTTCTCTGCACAAGCTCTCTGCCTGCTGCCATTCACAAAGGATGTGACTTGCTTCTCCTTGCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000515416.7 ENST00000551726.2 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 72 bp | AGGGTCCTTGTTACCACCTGGAGAGAAGGAATGTCTTaGTACCCAATTCAGCCTTCTCTGACACCAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RVLVTTWREGMS*YPIQPSLTPAM Trigger: CATGGCTGGTGTCAGAGAAGGCTGAATTGGGTACCAAGACATTCCTTCTCTCCAGGTGGTAACAAGGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653134.1 ENST00000662107.1 ENST00000663261.1 ENST00000665907.1 ENST00000669556.1 |
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| CDS CAA 72 bp | ATCTTTGGCACCTGCTGTTCGGCAGGTCTCAGGTTCTaGTTAGTCCTGGAGGCTGTAAGTCCAAGATCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: IFGTCCSAGLRF*LVLEAVSPRSS Trigger: GCTTGATCTTGGACTTACAGCCTCCAGGACTAACAAGAACCTGAGACCTGCCGAACAGCAGGTGCCAAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551726.2 |
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| CDS CCA 72 bp | GATTCAATCATCTCCCACTGGGTCCCTCCCACAACATaGGAGGATTATGGGAGCTACAAGATGAGATTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DSIISHWVPPTT*EDYGSYKMRFG Trigger: CCCAAATCTCATCTTGTAGCTCCCATAATCCTCCCATGTTGTGGGAGGGACCCAGTGGGAGATGATTGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000515416.7 ENST00000551726.2 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CAA 90 bp | ATACCATGTGAGGGTCCTTGTTACCACCTGGAGAGAAGGAATGTCTaGGTACCCAATTCAGCCTTCTCTGACACCAGCCAAGTGAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: IPCEGPCYHLERRNV*VPNSAFSDTSQVRT Trigger: TGTTCTCACTTGGCTGGTGTCAGAGAAGGCTGAATTGGGTACCAAGACATTCCTTCTCTCCAGGTGGTAACAAGGACCCTCACATGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549905.5 |
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| CDS TCA 72 bp | CATAGATGCCTGTGTGCATCTCTTCTATTGAACACCTaGGCTGTAGCTCTTCTCCAGGCGCTAAAGCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: HRCLCASLLLNT*AVALLQALKQQ Trigger: TTGCTGCTTTAGCGCCTGGAGAAGAGCTACAGCTCAGGTGTTCAATAGAAGAGATGCACACAGGCATCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000668228.1 ENST00000670471.1 |
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| CDS GCA 72 bp | ATGGCTTCCAGCTCCATCCATGTACATGATCTTGGGTaGTGGTTAGGCCTTCTATGTAAGTCTTCTTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: MASSSIHVHDLG*WLGLLCKSSSP Trigger: AGGGGAAGAAGACTTACATAGAAGGCCTAACCAGCACCCAAGATCATGTACATGGATGGAGCTGGAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549905.5 |
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| CDS GCA 72 bp | AATTCAGCCTTCTCTGACACCAGCCATGATCTTGGGTaGTGGTTAGGCCTTCTATGTAAGTCTTCTTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NSAFSDTSHDLG*WLGLLCKSSSP Trigger: AGGGGAAGAAGACTTACATAGAAGGCCTAACCAGCACCCAAGATCATGGCTGGTGTCAGAGAAGGCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653134.1 ENST00000662107.1 ENST00000663261.1 ENST00000665907.1 ENST00000669556.1 |
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| CDS GCA 72 bp | AGCGAAGTGATAAACATTAAGGTAGGGCTGTTCCATTaGTGGTCAGGCGTGATGCTTGGTGTCCTCTATGAC | + |
|
Preference number: 6 (lower is better) Translates to: SEVINIKVGLFH*WSGVMLGVLYD Trigger: GTCATAGAGGACACCAAGCATCACGCCTGACCAGCAATGGAACAGCCCTACCTTAATGTTTATCACTTCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670573.1 |
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| CDS CCA 72 bp | GCTTCCAGCTCCATCCATGTACATGATCTTGGGTGCTaGTTAGGCCTTCTATGTAAGTCTTCTTCCCCTATG | + |
|
Preference number: 6 (lower is better) Translates to: ASSSIHVHDLGC*LGLLCKSSSPM Trigger: CATAGGGGAAGAAGACTTACATAGAAGGCCTAACCAGCACCCAAGATCATGTACATGGATGGAGCTGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549905.5 |
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| CDS CAA 90 bp | AAGTCTCATCTAATACAAGGCAAGTCCCTTCCACCTAAGAGTCTATaGACAGGTCTCTTCACACGGACGCGCATTAAACCTGCAGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: KSHLIQGKSLPPKSL*TGLFTRTRIKPAED Trigger: ATCCTCTGCAGGTTTAATGCGCGTCCGTGTGAAGAGACCTGTCAATAGACTCTTAGGTGGAAGGGACTTGCCTTGTATTAGATGAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665907.1 |
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| CDS CAA 90 bp | AGGTCTCAGGTTCTTGTTCGGGGATCTGTGCTAGAGATGGTATCCTaGACTCCTATTGTTGTCTCCAGATGCTTTGATAGTGCTAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RSQVLVRGSVLEMVS*TPIVVSRCFDSASL Trigger: CAAGCTAGCACTATCAAAGCATCTGGAGACAACAATAGGAGTCAAGGATACCATCTCTAGCACAGATCCCCGAACAAGAACCTGAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000668228.1 ENST00000670471.1 |
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| CDS TCA 72 bp | ATGTCAGTCACCTGGATTCCATTTGCTGCTTTGGGCTaGAACACAACTCAGTTGCCTGGATTTCATCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: MSVTWIPFAALG*NTTQLPGFHHS Trigger: GCTGTGATGAAATCCAGGCAACTGAGTTGTGTTTCAGCCCAAAGCAGCAAATGGAATCCAGGTGACTGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551210.1 |
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| CDS TCA 72 bp | GAGAAGGAATGTCTTGGTACCCAATTCAGCCTTCTCTaGCACCAGCCAAGTGAGAACATGCAGTGTTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: EKECLGTQFSLL*HQPSENMQCLT Trigger: AGTCAAACACTGCATGTTCTCACTTGGCTGGTGTCAGAGAAGGCTGAATTGGGTACCAAGACATTCCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549905.5 |
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| CDS GCA 72 bp | TGTCAGATGATGGTCCTGAAGCTGGATTCCATTTGCTaGTTTGGGCTGAAACACAACTCAGTTGCCTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: CQMMVLKLDSIC*FGLKHNSVAWI Trigger: AATCCAGGCAACTGAGTTGTGTTTCAGCCCAAAGCAGCAAATGGAATCCAGCTTCAGGACCATCATCTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000515416.7 ENST00000549905.5 ENST00000551726.2 ENST00000653134.1 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000662107.1 ENST00000663261.1 ENST00000665895.1 ENST00000665907.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000669556.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 72 bp | ATTTGCTGCTTTGGGCTGAAACACAACTCAGTTGCCTaGATTTCATCACAGCTCATGGTTGGTTTCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ICCFGLKHNSVA*ISSQLMVGFQD Trigger: GTCCTGGAAACCAACCATGAGCTGTGATGAAATCCAGGCAACTGAGTTGTGTTTCAGCCCAAAGCAGCAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000515416.7 ENST00000549905.5 ENST00000551210.1 ENST00000551726.2 ENST00000653134.1 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000662107.1 ENST00000663261.1 ENST00000665895.1 ENST00000665907.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000669556.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 72 bp | CCTTGGCTGGGTGGTTCTTGCTCCGGGTTTCTCATGTaGTTGCAGATAATGAGTAACATCATTCTAAGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PWLGGSCSGFLM*LQIMSNIILRS Trigger: ACTCCTTAGAATGATGTTACTCATTATCTGCAACCACATGAGAAACCCGGAGCAAGAACCACCCAGCCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551210.1 |
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| CDS CAA 72 bp | CTAATACAAGGCAAGTCCCTTCCACCTAAGAGTCTATaGACAGGTCTCTTCACACGGACGCGCATTAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: LIQGKSLPPKSL*TGLFTRTRIKP Trigger: AGGTTTAATGCGCGTCCGTGTGAAGAGACCTGTCAATAGACTCTTAGGTGGAAGGGACTTGCCTTGTATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665907.1 |
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| CDS GCA 72 bp | TTCCATTTGCTGCTTTGGGCTGAAACACAACTCAGTTaGCTGGATTTCATCACAGCTCATGGTTGGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FHLLLWAETQLS*LDFITAHGWFP Trigger: TGGAAACCAACCATGAGCTGTGATGAAATCCAGGCAACTGAGTTGTGTTTCAGCCCAAAGCAGCAAATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000515416.7 ENST00000549905.5 ENST00000551210.1 ENST00000551726.2 ENST00000653134.1 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000662107.1 ENST00000663261.1 ENST00000665895.1 ENST00000665907.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000669556.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS GCA 72 bp | GCAAGTCCCTTCCACCTAAGAGTCAAGAACATCAGTTaGTCTACGGATCTCTGTAAATCTTGTTTGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASPFHLRVKNIS*STDLCKSCLAV Trigger: CACTGCCAAACAAGATTTACAGAGATCCGTAGAGCAACTGATGTTCTTGACTCTTAGGTGGAAGGGACTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663261.1 |
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| CDS CCA 72 bp | GAAGTGATAAACATTAAGGTAGGGCTGTTCCATTGCTaGTCAGGCGTGATGCTTGGTGTCCTCTATGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: EVINIKVGLFHC*SGVMLGVLYDF Trigger: AAAGTCATAGAGGACACCAAGCATCACGCCTGACCAGCAATGGAACAGCCCTACCTTAATGTTTATCACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670573.1 |
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| CDS CAA 72 bp | AGTCACATCCTTTGTGAATGGCAGCAGGCAGAGAGCTaGTGCAGAGAAACTCCCATTTTTAACACCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHILCEWQQAES*CRETPIFNTIR Trigger: TCTGATGGTGTTAAAAATGGGAGTTTCTCTGCACAAGCTCTCTGCCTGCTGCCATTCACAAAGGATGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000515416.7 ENST00000551726.2 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CAA 72 bp | AACATCAGTTGCTCTACGGATCTCTGTAAATCTTGTTaGGCAGTGGCCCCACTATTGACAGGTCTCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: NISCSTDLCKSC*AVAPLLTGLFT Trigger: TGTGAAGAGACCTGTCAATAGTGGGGCCACTGCCAAACAAGATTTACAGAGATCCGTAGAGCAACTGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663261.1 |
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| CDS TCA 72 bp | TTTCCAGGACAAGCATCAAAACACGATACAGAGAGGTaGAGTGAGCACACGCTCTTGAAAAATGGTGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FPGQASKHDTER*SEHTLLKNGAE Trigger: TTCAGCACCATTTTTCAAGAGCGTGTGCTCACTTCACCTCTCTGTATCGTGTTTTGATGCTTGTCCTGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 12 transcripts: ENST00000551726.2 ENST00000653134.1 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS TCA 72 bp | GGGAGGCTTCAAGAAATTTACAATCATGGTACAAGGTaGAGGGGAAACAAGGTACATCTTACATGGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GRLQEIYNHGTR*RGNKVHLTWWQ Trigger: CTGCCACCATGTAAGATGTACCTTGTTTCCCCTTCACCTTGTACCATGATTGTAAATTTCTTGAAGCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663261.1 ENST00000665907.1 |
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| CDS CCA 72 bp | TTTATGATTATCTTTCAAAGTTCTAGAGATTGGCCTTaGCTGGGTGGTTCTTGCTCCGGGTTTCTCATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FMIIFQSSRDWP*LGGSCSGFLMW Trigger: CCACATGAGAAACCCGGAGCAAGAACCACCCAGCCAAGGCCAATCTCTAGAACTTTGAAAGATAATCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000551210.1 |
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| CDS CCA 72 bp | AACACAACTCAGTTGCCTGGATTTCATCACAGCTCATaGTTGGTTTCCAGGACAAGCATCAAAACACGATAC | + |
|
Preference number: 6 (lower is better) Translates to: NTTQLPGFHHSS*LVSRTSIKTRY Trigger: GTATCGTGTTTTGATGCTTGTCCTGGAAACCAACCATGAGCTGTGATGAAATCCAGGCAACTGAGTTGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000551726.2 ENST00000653134.1 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CCA 72 bp | CACTGTTGGTTGGACTGTAAACTAGTTCAACCATTGTaGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HCWLDCKLVQPL*KSVWRFLRDLE Trigger: TTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCAACCAACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS CAA 72 bp | ACAACTCAGTTGCCTGGATTTCATCACAGCTCATGGTaGGTTTCCAGGACAAGCATCAAAACACGATACAGA | + |
|
Preference number: 6 (lower is better) Translates to: TTQLPGFHHSSW*VSRTSIKTRYR Trigger: TCTGTATCGTGTTTTGATGCTTGTCCTGGAAACCAACCATGAGCTGTGATGAAATCCAGGCAACTGAGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000551726.2 ENST00000653134.1 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS CAA 72 bp | GTTCTTGTTCGGGGATCTGTGCTAGAGATGGTATCCTaGACTCCTATTGTTGTCTCCAGATGCTTTGATAGT | + |
|
Preference number: 6 (lower is better) Translates to: VLVRGSVLEMVS*TPIVVSRCFDS Trigger: ACTATCAAAGCATCTGGAGACAACAATAGGAGTCAAGGATACCATCTCTAGCACAGATCCCCGAACAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000668228.1 ENST00000670471.1 |
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| CDS TCA 72 bp | TGCTATACAAATCCAAACACCTATGTAAGACATGGCTaGGCACATAATGACCCAGACACTTGCCTGCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CYTNPNTYVRHG*AHNDPDTCLLQ Trigger: TTGAAGCAGGCAAGTGTCTGGGTCATTATGTGCTCAGCCATGTCTTACATAGGTGTTTGGATTTGTATAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658677.1 ENST00000668665.1 ENST00000670471.1 |
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| CDS TCA 72 bp | TTGTTGTCTCCAGATGCTTTGATAGTGCTAGCTTGCTaGCAACATAGATGCCTGTGTGCATCTCTTCTATTG | + |
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Preference number: 6 (lower is better) Translates to: LLSPDALIVLAC*QHRCLCASLLL Trigger: CAATAGAAGAGATGCACACAGGCATCTATGTTGTCAGCAAGCTAGCACTATCAAAGCATCTGGAGACAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000668228.1 ENST00000670471.1 |
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| CDS CAA 90 bp | GGAACACTTTTACACTGTTGGTTGGACTGTAAACTAGTTCAACCATaGTGGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GTLLHCWLDCKLVQP*WKSVWRFLRDLELE Trigger: TTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCAACCAACAGTGTAAAAGTGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS GCA 72 bp | GGACAATTATTAATAATCCTGCTACAAGCATCTCTATaGATGGGTCCTGATATGCTCCTATGGGCAATTCAC | + |
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Preference number: 6 (lower is better) Translates to: GQLLIILLQASL*MGPDMLLWAIH Trigger: GTGAATTGCCCATAGGAGCATATCAGGACCCATGCATAGAGATGCTTGTAGCAGGATTATTAATAATTGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000668665.1 ENST00000670471.1 |
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| CDS CCA 72 bp | AGAGGTAGCATGATAATGGAAGATTTCCACATCTTCTaGAGTGCTGCTGTTAAGAGAGACTCTTCTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: RGSMIMEDFHIF*SAAVKRDSSFT Trigger: TGTGAAAGAAGAGTCTCTCTTAACAGCAGCACTCCAGAAGATGTGGAAATCTTCCATTATCATGCTACCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669556.1 |
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| CDS CAA 90 bp | CAGTGCCCACACATTACCTTAGCAGAATTACCTTTGCTCATCAACTaGAGAAAAAGCCATAAGTGGTTCACTTTGAATGTACAGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: QCPHITLAELPLLIN*RKSHKWFTLNVQKP Trigger: AGGCTTCTGTACATTCAAAGTGAACCACTTATGGCTTTTTCTCAAGTTGATGAGCAAAGGTAATTCTGCTAAGGTAATGTGTGGGCACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS TCA 72 bp | CAGAAATTCAAACATTTGGTCTTCATTAATACCATGTaGGGGTCCTTGTTACCACCTGGAGAGAAGGAATGT | + |
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Preference number: 6 (lower is better) Translates to: QKFKHLVFINTM*GSLLPPGEKEC Trigger: ACATTCCTTCTCTCCAGGTGGTAACAAGGACCCTCACATGGTATTAATGAAGACCAAATGTTTGAATTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000549905.5 ENST00000653134.1 ENST00000662107.1 ENST00000663261.1 ENST00000665907.1 ENST00000669556.1 |
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| CDS TCA 72 bp | GTACACTTGTTTATCCAAACTTGTAGCTTAATGGGGTaGAAGGAAGAGGAACATGGCTTATCAATGGCTATG | + |
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Preference number: 6 (lower is better) Translates to: VHLFIQTCSLMG*KEEEHGLSMAM Trigger: CATAGCCATTGATAAGCCATGTTCCTCTTCCTTTCACCCCATTAAGCTACAAGTTTGGATAAACAAGTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668665.1 |
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| CDS TCA 72 bp | GTGTTTGAAGTTAGGTTGCTTTGGGTTTCAGGAGTCTaGGAAAAGGCTAAGGGCCTTTGTAGATATAATTTC | + |
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Preference number: 6 (lower is better) Translates to: VFEVRLLWVSGV*EKAKGLCRYNF Trigger: GAAATTATATCTACAAAGGCCCTTAGCCTTTTCTCAGACTCCTGAAACCCAAAGCAACCTAACTTCAAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669556.1 |
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| CDS CCA 72 bp | AGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTaGTTGGACTGTAAACTAGTTCAACCATTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RGCGEIGTLLHC*LDCKLVQPLWK Trigger: CTTCCACAATGGTTGAACTAGTTTACAGTCCAACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS TCA 72 bp | ATTTTTAACACCATCAGATCTTGTGAGACCCATTCATaGTCACATGGGTCTTTCTCACATGAATGGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: IFNTIRSCETHS*SHGSFSHEWDH Trigger: ATGATCCCATTCATGTGAGAAAGACCCATGTGATCATGAATGGGTCTCACAAGATCTGATGGTGTTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000515416.7 ENST00000551726.2 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS TCA 72 bp | CACACGCTCTTGAAAAATGGTGCTGAAAAATTTGCTTaGGTCAAGGATGCCACAAACTTTCCATTTGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: HTLLKNGAEKFA*VKDATNFPFVE Trigger: TTCTACAAATGGAAAGTTTGTGGCATCCTTGACTCAAGCAAATTTTTCAGCACCATTTTTCAAGAGCGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 12 transcripts: ENST00000551726.2 ENST00000653134.1 ENST00000656876.1 ENST00000658677.1 ENST00000658833.1 ENST00000663261.1 ENST00000665895.1 ENST00000668228.1 ENST00000668665.1 ENST00000668997.1 ENST00000670471.1 ENST00000670573.1 |
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| CDS TCA 72 bp | TTCACATCCTTCTTTTTACCTCCAATGACATGGTACTaGATGCTCTGTATTCACTTATCTGCAGAGGATAAG | + |
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Preference number: 6 (lower is better) Translates to: FTSFFLPPMTWY*MLCIHLSAEDK Trigger: CTTATCCTCTGCAGATAAGTGAATACAGAGCATTCAGTACCATGTCATTGGAGGTAAAAAGAAGGATGTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669556.1 |
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| CDS GCA 72 bp | TGTACACACAAACCAGTTGCATATAAAGAGTCCCATTaGTCCATGCATTTTATAACACATGGACTTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: CTHKPVAYKESH*SMHFITHGLDR Trigger: TCTGTCAAGTCCATGTGTTATAAAATGCATGGAGCAATGGGACTCTTTATATGCAACTGGTTTGTGTGTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670471.1 |
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| CDS TCA 72 bp | TCAATAAAGAACTTCCATAATAATGGGCTGTTAATTTaGGATAGTCCTGGAGGCTGTAAGTCCAAGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: SIKNFHNNGLLI*DSPGGCKSKIK Trigger: CTTGATCTTGGACTTACAGCCTCCAGGACTATCTCAAATTAACAGCCCATTATTATGGAAGTTCTTTATTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656876.1 ENST00000658833.1 ENST00000665895.1 ENST00000670573.1 |
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| CDS CCA 72 bp | AAAAATGTAACTTACCTCACTGGACCTGTGACTTCATaGATAAAATGTTCAGTTATGGATCAATATGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: KNVTYLTGPVTS*IKCSVMDQYAA Trigger: CGCAGCATATTGATCCATAACTGAACATTTTATCCATGAAGTCACAGGTCCAGTGAGGTAAGTTACATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668665.1 |
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| CDS CAA 72 bp | CTCATCAACTTGAGAAAAAGCCATAAGTGGTTCACTTaGAATGTACAGAAGCCTAAAGTAAATGCACTCACA | + |
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Preference number: 6 (lower is better) Translates to: LINLRKSHKWFT*NVQKPKVNALT Trigger: TGTGAGTGCATTTACTTTAGGCTTCTGTACATTCAAAGTGAACCACTTATGGCTTTTTCTCAAGTTGATGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS CAA 90 bp | TTACCTTTGCTCATCAACTTGAGAAAAAGCCATAAGTGGTTCACTTaGAATGTACAGAAGCCTAAAGTAAATGCACTCACAATTAGGATT | + |
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Preference number: 6 (lower is better) Translates to: LPLLINLRKSHKWFT*NVQKPKVNALTIRI Trigger: AATCCTAATTGTGAGTGCATTTACTTTAGGCTTCTGTACATTCAAAGTGAACCACTTATGGCTTTTTCTCAAGTTGATGAGCAAAGGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS CCA 72 bp | GAAAAACAGAGTATAACAGGTATACCTAACCCATTTTaGCGATCAATAAAGAACTTCCATAATAATGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: EKQSITGIPNPF*RSIKNFHNNGL Trigger: CAGCCCATTATTATGGAAGTTCTTTATTGATCGCCAAAATGGGTTAGGTATACCTGTTATACTCTGTTTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656876.1 |
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| CDS CCA 72 bp | CAGAATTTATGTCTAACAGGTATACCTAACCCATTTTaGCGATCAATAAAGAACTTCCATAATAATGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: QNLCLTGIPNPF*RSIKNFHNNGL Trigger: CAGCCCATTATTATGGAAGTTCTTTATTGATCGCCAAAATGGGTTAGGTATACCTGTTAGACATAAATTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665895.1 |
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| CDS CAA 72 bp | CACATTACCTTAGCAGAATTACCTTTGCTCATCAACTaGAGAAAAAGCCATAAGTGGTTCACTTTGAATGTA | + |
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Preference number: 6 (lower is better) Translates to: HITLAELPLLIN*RKSHKWFTLNV Trigger: TACATTCAAAGTGAACCACTTATGGCTTTTTCTCAAGTTGATGAGCAAAGGTAATTCTGCTAAGGTAATGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653134.1 |
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| CDS TCA 72 bp | TCAATAAAGAACTTCCATAATAATGGGCTGTTAATTTaGGATCTTATGCCTCGGATTACAAAGTCATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SIKNFHNNGLLI*DLMPRITKSFL Trigger: GAGGAATGACTTTGTAATCCGAGGCATAAGATCTCAAATTAACAGCCCATTATTATGGAAGTTCTTTATTGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663261.1 ENST00000668997.1 |
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