Pregenerated sensors for LINC02881 (Homo sapiens)

Ensembl gene IDs: ENSG00000277288

Ensembl transcript IDs: ENST00000623589.1, ENST00000649743.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATGTTACAGAGGAGAGAGACACAGAGATGCCTGGGGCAAGACATATaGGGAGGGCGAGAAGCTTCCATGCCCTCCTGGGGCTGTCGAACT	+
Preference number: 5 (lower is better) Translates to: MLQRRETQRCLGQDI*GGREASMPSWGCRT Trigger: AGTTCGACAGCCCCAGGAGGGCATGGAAGCTTCTCGCCCTCCTCATATGTCTTGCCCCAGGCATCTCTGTGTCTCTCTCCTCTGTAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649743.1
CDS CCA 90 bp	ATTTACTATAAAGGATGTTACAGAGGAGAGAGACACAGAGATGCCTaGGGCAAGACATATGAGGAGGGCGAGAAGCTTCCATGCCCTCCT	+
Preference number: 5 (lower is better) Translates to: IYYKGCYRGERHRDA*GKTYEEGEKLPCPP Trigger: AGGAGGGCATGGAAGCTTCTCGCCCTCCTCATATGTCTTGCCCCAGGCATCTCTGTGTCTCTCTCCTCTGTAACATCCTTTATAGTAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649743.1
CDS CAA 72 bp	GCCCTCCTGAGGCCCCTGGGCTCCCGCTCCTCCGAGTaGCCTGCGGCCGAGTCCTGGCGCGGCCTGGGACTG	+
Preference number: 6 (lower is better) Translates to: ALLRPLGSRSSE*PAAESWRGLGL Trigger: CAGTCCCAGGCCGCGCCAGGACTCGGCCGCAGGCAACTCGGAGGAGCGGGAGCCCAGGGGCCTCAGGAGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623589.1 ENST00000649743.1
CDS GCA 72 bp	CCTGAGGCCCCTGGGCTCCCGCTCCTCCGAGTTGCCTaGGGCCGAGTCCTGGCGCGGCCTGGGACTGCCTGT	+
Preference number: 6 (lower is better) Translates to: PEAPGLPLLRVA*GRVLARPGTAC Trigger: ACAGGCAGTCCCAGGCCGCGCCAGGACTCGGCCGCAGGCAACTCGGAGGAGCGGGAGCCCAGGGGCCTCAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623589.1 ENST00000649743.1
CDS TCA 72 bp	AGGAGAGAGACACAGAGATGCCTGGGGCAAGACATATaGGGAGGGCGAGAAGCTTCCATGCCCTCCTGGGGC	+
Preference number: 6 (lower is better) Translates to: RRETQRCLGQDI*GGREASMPSWG Trigger: GCCCCAGGAGGGCATGGAAGCTTCTCGCCCTCCTCATATGTCTTGCCCCAGGCATCTCTGTGTCTCTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649743.1
CDS CAA 72 bp	GAGCAGAGACCCACGCGATTCAGTCCCAGAGCAATGTaGCGGTCAAGAGAACACAGTCCAGCTACCAACAGT	+
Preference number: 6 (lower is better) Translates to: EQRPTRFSPRAM*RSREHSPATNS Trigger: ACTGTTGGTAGCTGGACTGTGTTCTCTTGACCGCAACATTGCTCTGGGACTGAATCGCGTGGGTCTCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649743.1

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