Pregenerated sensors for LINC02878 (Homo sapiens)

Ensembl gene IDs: ENSG00000181097

Ensembl transcript IDs: ENST00000531565.1, ENST00000611604.2

Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AAGAGCAGCAGCCTGACCGCAGCTGAGCACGGTCGTGCTCCTCCCTaGGGAAGTGCCAAGGGAGGGACCCCCTGCTCTACCCGGAGCCCT	+
Preference number: 5 (lower is better) Translates to: KSSSLTAAEHGRAPP*GSAKGGTPCSTRSP Trigger: AGGGCTCCGGGTAGAGCAGGGGGTCCCTCCCTTGGCACTTCCCCAGGGAGGAGCACGACCGTGCTCAGCTGCGGTCAGGCTGCTGCTCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 90 bp	CGCGGCCAGTGGCTTCCTGCAGGGCGCTCAAAACCCAAGTCCTTATaGTCCGCCGCATCTACTGCCGAGACACCAGCTGCTCCGTCCCCA	+
Preference number: 5 (lower is better) Translates to: RGQWLPAGRSKPKSL*SAASTAETPAAPSP Trigger: TGGGGACGGAGCAGCTGGTGTCTCGGCAGTAGATGCGGCGGATCATAAGGACTTGGGTTTTGAGCGCCCTGCAGGAAGCCACTGGCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 90 bp	AGGATGCCTCTGAACCAGGAGGCGCTCGCCGGAAACGGACCCTGTTaGCACCTCTACCTCGGACTTCCAGCCTGCAGAGCTGGAGAGAAT	+
Preference number: 5 (lower is better) Translates to: RMPLNQEALAGNGPC*HLYLGLPACRAGEN Trigger: ATTCTCTCCAGCTCTGCAGGCTGGAAGTCCGAGGTAGAGGTGCCAACAGGGTCCGTTTCCGGCGAGCGCCTCCTGGTTCAGAGGCATCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 90 bp	CCCACCTGTGCTCAAGCACCTGAAGGCCCTTCCAACGGCGCCCGCTaGGCAGGGGACAAACCAGACACGAAACACACATGCGCTTTTACC	+
Preference number: 5 (lower is better) Translates to: PTCAQAPEGPSNGAR*AGDKPDTKHTCAFT Trigger: GGTAAAAGCGCATGTGTGTTTCGTGTCTGGTTTGTCCCCTGCCCAGCGGGCGCCGTTGGAAGGGCCTTCAGGTGCTTGAGCACAGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 90 bp	GGGTCTGTGGGCCAGGACAGACCCAGAGGAGCTTCTGCTACGGGCTaGATGGTCACTCTGAAATTCCCATGTGGAAGCCCTAGGCCCGAC	+
Preference number: 5 (lower is better) Translates to: GSVGQDRPRGASATG*MVTLKFPCGSPRPD Trigger: GTCGGGCCTAGGGCTTCCACATGGGAATTTCAGAGTGACCATTCAGCCCGTAGCAGAAGCTCCTCTGGGTCTGTCCTGGCCCACAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS GCA 90 bp	ACCCAAGTCCTTATGATCCGCCGCATCTACTGCCGAGACACCAGCTaGTCCGTCCCCACCTGTGCTCAAGCACCTGAAGGCCCTTCCAAC	+
Preference number: 5 (lower is better) Translates to: TQVLMIRRIYCRDTS*SVPTCAQAPEGPSN Trigger: GTTGGAAGGGCCTTCAGGTGCTTGAGCACAGGTGGGGACGGAGCAGCTGGTGTCTCGGCAGTAGATGCGGCGGATCATAAGGACTTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 90 bp	TGTGAGCCCTGGATGATGAGGCCACCAAGAGCAAGGCAGCCCGCTTaGACAACTGACCATCATCTGACGAGGCAGCGCATCACCCACGTC	+
Preference number: 5 (lower is better) Translates to: CEPWMMRPPRARQPA*TTDHHLTRQRITHV Trigger: GACGTGGGTGATGCGCTGCCTCGTCAGATGATGGTCAGTTGTCCAAGCGGGCTGCCTTGCTCTTGGTGGCCTCATCATCCAGGGCTCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 90 bp	CTGGATGATGAGGCCACCAAGAGCAAGGCAGCCCGCTTGGACAACTaGCCATCATCTGACGAGGCAGCGCATCACCCACGTCTCTGCTGT	+
Preference number: 5 (lower is better) Translates to: LDDEATKSKAARLDN*PSSDEAAHHPRLCC Trigger: ACAGCAGAGACGTGGGTGATGCGCTGCCTCGTCAGATGATGGTCAGTTGTCCAAGCGGGCTGCCTTGCTCTTGGTGGCCTCATCATCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS GCA 90 bp	CTCCTCCTCCTAGCACCATGGACTCCTTCATCTTTCAGTCAAGGCTaGCAGTGGCTACCACGTGGCCCTCCCATTCCTGGAGCTCTCAGC	+
Preference number: 5 (lower is better) Translates to: LLLLAPWTPSSFSQG*QWLPRGPPIPGALS Trigger: GCTGAGAGCTCCAGGAATGGGAGGGCCACGTGGTAGCCACTGGCAGCCTTGACTGAAAGATGAAGGAGTCCATGGTGCTAGGAGGAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 90 bp	CTCCTAGCACCATGGACTCCTTCATCTTTCAGTCAAGGCTGCCAGTaGCTACCACGTGGCCCTCCCATTCCTGGAGCTCTCAGCTGCATC	+
Preference number: 5 (lower is better) Translates to: LLAPWTPSSFSQGCQ*LPRGPPIPGALSCI Trigger: GATGCAGCTGAGAGCTCCAGGAATGGGAGGGCCACGTGGTAGCCACTGGCAGCCTTGACTGAAAGATGAAGGAGTCCATGGTGCTAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS GCA 90 bp	TTCCTACACAGGGTCTGTGGGCCAGGACAGACCCAGAGGAGCTTCTaGTACGGGCTGAATGGTCACTCTGAAATTCCCATGTGGAAGCCC	+
Preference number: 5 (lower is better) Translates to: FLHRVCGPGQTQRSF*YGLNGHSEIPMWKP Trigger: GGGCTTCCACATGGGAATTTCAGAGTGACCATTCAGCCCGTAGCAGAAGCTCCTCTGGGTCTGTCCTGGCCCACAGACCCTGTGTAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 90 bp	AGGCGCCACGTCATTTCCCCACAAAGACGTCCAAATGCATCTGAGTaGGGATTCCTCCGTAACCCTGTGTCACCATCACCGCTAGCAGCC	+
Preference number: 5 (lower is better) Translates to: RRHVISPQRRPNASE*GFLRNPVSPSPLAA Trigger: GGCTGCTAGCGGTGATGGTGACACAGGGTTACGGAGGAATCCTCACTCAGATGCATTTGGACGTCTTTGTGGGGAAATGACGTGGCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 90 bp	TTCACATTTAATCCTGCACAAGAGCGTCACAAAGTGACAGCATTGTaGGGGACTAACGACCAGGCACAGGTGACCCTGGACGCGGCCAGT	+
Preference number: 5 (lower is better) Translates to: FTFNPAQERHKVTAL*GTNDQAQVTLDAAS Trigger: ACTGGCCGCGTCCAGGGTCACCTGTGCCTGGTCGTTAGTCCCTCACAATGCTGTCACTTTGTGACGCTCTTGTGCAGGATTAAATGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 72 bp	AGCCTGACCGCAGCTGAGCACGGTCGTGCTCCTCCCTaGGGAAGTGCCAAGGGAGGGACCCCCTGCTCTACC	+
Preference number: 6 (lower is better) Translates to: SLTAAEHGRAPP*GSAKGGTPCST Trigger: GGTAGAGCAGGGGGTCCCTCCCTTGGCACTTCCCCAGGGAGGAGCACGACCGTGCTCAGCTGCGGTCAGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 72 bp	CTGAACCAGGAGGCGCTCGCCGGAAACGGACCCTGTTaGCACCTCTACCTCGGACTTCCAGCCTGCAGAGCT	+
Preference number: 6 (lower is better) Translates to: LNQEALAGNGPC*HLYLGLPACRA Trigger: AGCTCTGCAGGCTGGAAGTCCGAGGTAGAGGTGCCAACAGGGTCCGTTTCCGGCGAGCGCCTCCTGGTTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 72 bp	GCTCAAGCACCTGAAGGCCCTTCCAACGGCGCCCGCTaGGCAGGGGACAAACCAGACACGAAACACACATGC	+
Preference number: 6 (lower is better) Translates to: AQAPEGPSNGAR*AGDKPDTKHTC Trigger: GCATGTGTGTTTCGTGTCTGGTTTGTCCCCTGCCCAGCGGGCGCCGTTGGAAGGGCCTTCAGGTGCTTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 72 bp	GAGGCCACCAAGAGCAAGGCAGCCCGCTTGGACAACTaGCCATCATCTGACGAGGCAGCGCATCACCCACGT	+
Preference number: 6 (lower is better) Translates to: EATKSKAARLDN*PSSDEAAHHPR Trigger: ACGTGGGTGATGCGCTGCCTCGTCAGATGATGGTCAGTTGTCCAAGCGGGCTGCCTTGCTCTTGGTGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 72 bp	GAGCAAGGCAGCCCGCTTGGACAACTGACCATCATCTaGCGAGGCAGCGCATCACCCACGTCTCTGCTGTTC	+
Preference number: 6 (lower is better) Translates to: EQGSPLGQLTII*RGSASPTSLLF Trigger: GAACAGCAGAGACGTGGGTGATGCGCTGCCTCGTCAGATGATGGTCAGTTGTCCAAGCGGGCTGCCTTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 72 bp	TGGCTTCCTGCAGGGCGCTCAAAACCCAAGTCCTTATaGTCCGCCGCATCTACTGCCGAGACACCAGCTGCT	+
Preference number: 6 (lower is better) Translates to: WLPAGRSKPKSL*SAASTAETPAA Trigger: AGCAGCTGGTGTCTCGGCAGTAGATGCGGCGGATCATAAGGACTTGGGTTTTGAGCGCCCTGCAGGAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 72 bp	TGGATGATGAGGCCACCAAGAGCAAGGCAGCCCGCTTaGACAACTGACCATCATCTGACGAGGCAGCGCATC	+
Preference number: 6 (lower is better) Translates to: WMMRPPRARQPA*TTDHHLTRQRI Trigger: GATGCGCTGCCTCGTCAGATGATGGTCAGTTGTCCAAGCGGGCTGCCTTGCTCTTGGTGGCCTCATCATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 72 bp	TTCATCTTTCAGTCAAGGCTGCCAGTGGCTACCACGTaGCCCTCCCATTCCTGGAGCTCTCAGCTGCATCCG	+
Preference number: 6 (lower is better) Translates to: FIFQSRLPVATT*PSHSWSSQLHP Trigger: CGGATGCAGCTGAGAGCTCCAGGAATGGGAGGGCCACGTGGTAGCCACTGGCAGCCTTGACTGAAAGATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CCA 72 bp	CCATGGACTCCTTCATCTTTCAGTCAAGGCTGCCAGTaGCTACCACGTGGCCCTCCCATTCCTGGAGCTCTC	+
Preference number: 6 (lower is better) Translates to: PWTPSSFSQGCQ*LPRGPPIPGAL Trigger: GAGAGCTCCAGGAATGGGAGGGCCACGTGGTAGCCACTGGCAGCCTTGACTGAAAGATGAAGGAGTCCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 72 bp	GGCCAGGACAGACCCAGAGGAGCTTCTGCTACGGGCTaGATGGTCACTCTGAAATTCCCATGTGGAAGCCCT	+
Preference number: 6 (lower is better) Translates to: GQDRPRGASATG*MVTLKFPCGSP Trigger: AGGGCTTCCACATGGGAATTTCAGAGTGACCATTCAGCCCGTAGCAGAAGCTCCTCTGGGTCTGTCCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS GCA 72 bp	AGGGTCTGTGGGCCAGGACAGACCCAGAGGAGCTTCTaGTACGGGCTGAATGGTCACTCTGAAATTCCCATG	+
Preference number: 6 (lower is better) Translates to: RVCGPGQTQRSF*YGLNGHSEIPM Trigger: CATGGGAATTTCAGAGTGACCATTCAGCCCGTAGCAGAAGCTCCTCTGGGTCTGTCCTGGCCCACAGACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS GCA 72 bp	CTAGCACCATGGACTCCTTCATCTTTCAGTCAAGGCTaGCAGTGGCTACCACGTGGCCCTCCCATTCCTGGA	+
Preference number: 6 (lower is better) Translates to: LAPWTPSSFSQG*QWLPRGPPIPG Trigger: TCCAGGAATGGGAGGGCCACGTGGTAGCCACTGGCAGCCTTGACTGAAAGATGAAGGAGTCCATGGTGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 72 bp	AATCCTGCACAAGAGCGTCACAAAGTGACAGCATTGTaGGGGACTAACGACCAGGCACAGGTGACCCTGGAC	+
Preference number: 6 (lower is better) Translates to: NPAQERHKVTAL*GTNDQAQVTLD Trigger: GTCCAGGGTCACCTGTGCCTGGTCGTTAGTCCCTCACAATGCTGTCACTTTGTGACGCTCTTGTGCAGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS GCA 72 bp	CGCTGGGCAGGGGACAAACCAGACACGAAACACACATaGGCTTTTACCAGCCTGGACTCTGTAAGAGAAAGG	+
Preference number: 6 (lower is better) Translates to: RWAGDKPDTKHT*AFTSLDSVRER Trigger: CCTTTCTCTTACAGAGTCCAGGCTGGTAAAAGCGCATGTGTGTTTCGTGTCTGGTTTGTCCCCTGCCCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS GCA 72 bp	CCATCATCTGACGAGGCAGCGCATCACCCACGTCTCTaGTGTTCACATTTAATCCTGCACAAGAGCGTCACA	+
Preference number: 6 (lower is better) Translates to: PSSDEAAHHPRL*CSHLILHKSVT Trigger: TGTGACGCTCTTGTGCAGGATTAAATGTGAACAGCAGAGACGTGGGTGATGCGCTGCCTCGTCAGATGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 72 bp	GTCATTTCCCCACAAAGACGTCCAAATGCATCTGAGTaGGGATTCCTCCGTAACCCTGTGTCACCATCACCG	+
Preference number: 6 (lower is better) Translates to: VISPQRRPNASE*GFLRNPVSPSP Trigger: CGGTGATGGTGACACAGGGTTACGGAGGAATCCTCACTCAGATGCATTTGGACGTCTTTGTGGGGAAATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS TCA 72 bp	TGTTCACATTTAATCCTGCACAAGAGCGTCACAAAGTaGCAGCATTGTGAGGGACTAACGACCAGGCACAGG	+
Preference number: 6 (lower is better) Translates to: CSHLILHKSVTK*QHCEGLTTRHR Trigger: CCTGTGCCTGGTCGTTAGTCCCTCACAATGCTGTCACTTTGTGACGCTCTTGTGCAGGATTAAATGTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS GCA 72 bp	TATTTACTTGGCATTGTACTTCCCAAAGAAGAATATTaGAGCCACTGGGCCTCCCTTCAGAGTGCAGAGAGG	+
Preference number: 6 (lower is better) Translates to: YLLGIVLPKEEY*SHWASLQSAER Trigger: CCTCTCTGCACTCTGAAGGGAGGCCCAGTGGCTGCAATATTCTTCTTTGGGAAGTACAATGCCAAGTAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2
CDS CAA 72 bp	TTATTTACTTGGCATTGTACTTCCCAAAGAAGAATATaGCAGCCACTGGGCCTCCCTTCAGAGTGCAGAGAG	+
Preference number: 6 (lower is better) Translates to: LFTWHCTSQRRI*QPLGLPSECRE Trigger: CTCTCTGCACTCTGAAGGGAGGCCCAGTGGCTGCAATATTCTTCTTTGGGAAGTACAATGCCAAGTAAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531565.1 ENST00000611604.2

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