Pregenerated sensors for LINC02874 (Homo sapiens)
Ensembl gene IDs: ENSG00000257137Ensembl transcript IDs: ENST00000551332.1, ENST00000551894.6, ENST00000553017.1, ENST00000639627.1, ENST00000656354.1, ENST00000665543.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGTGCTGTCGTCATTACCCAGCAGCGCGTGTCTGCCTCCTGACCTaGCTCTGTCCTGGGTCTCTCTGGGCCCTGGGTGTCAGGCTCATT | + |
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Preference number: 5 (lower is better) Translates to: WCCRHYPAARVCLLT*LCPGSLWALGVRLI Trigger: AATGAGCCTGACACCCAGGGCCCAGAGAGACCCAGGACAGAGGCAGGTCAGGAGGCAGACACGCGCTGCTGGGTAATGACGACAGCACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000553017.1 ENST00000639627.1 ENST00000665543.1 |
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| CDS GCA 90 bp | AGCCGTGATTACTGGTGCTGTCGTCATTACCCAGCAGCGCGTGTCTaGCTCCTGACCTGCCTCTGTCCTGGGTCTCTCTGGGCCCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SRDYWCCRHYPAARV*LLTCLCPGSLWALG Trigger: ACCCAGGGCCCAGAGAGACCCAGGACAGAGGCAGGTCAGGAGGCAGACACGCGCTGCTGGGTAATGACGACAGCACCAGTAATCACGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000553017.1 ENST00000639627.1 ENST00000665543.1 |
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| CDS CCA 90 bp | TCTCTCTGGGCCCTGGGTGTCAGGCTCATTCCTCATTTCCCAACCTaGAAGCTTCCCAAGGGCAGGGCTCACATGCATCATCTTCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: SLWALGVRLIPHFPT*KLPKGRAHMHHLLA Trigger: AGCGAGAAGATGATGCATGTGAGCCCTGCCCTTGGGAAGCTTCCAGGTTGGGAAATGAGGAATGAGCCTGACACCCAGGGCCCAGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000553017.1 ENST00000639627.1 ENST00000665543.1 |
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| CDS CCA 90 bp | GGAAGCTTCCCAAGGGCAGGGCTCACATGCATCATCTTCTCGCTCTaGCTGTTTCAGGAAGTGATGGGAGTGGGGAAGGCTGTTGAACTG | + |
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Preference number: 5 (lower is better) Translates to: GSFPRAGLTCIIFSL*LFQEVMGVGKAVEL Trigger: CAGTTCAACAGCCTTCCCCACTCCCATCACTTCCTGAAACAGCCAGAGCGAGAAGATGATGCATGTGAGCCCTGCCCTTGGGAAGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639627.1 |
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| CDS TCA 90 bp | CTCGCTCTGGCTGTTTCAGGAAGTGATGGGAGTGGGGAAGGCTGTTaGACTGGTGATGTCACAATTTGGGGCTTCTGGGTGGTTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LALAVSGSDGSGEGC*TGDVTIWGFWVVLQ Trigger: CTGCAGAACCACCCAGAAGCCCCAAATTGTGACATCACCAGTTCAACAGCCTTCCCCACTCCCATCACTTCCTGAAACAGCCAGAGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639627.1 |
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| CDS CCA 90 bp | CTTCCAGGTACTCCCCAGAGATTCCTTTCCCAGTATAACCTTAGCTaGGGCCTCCCTGGCAATGAAGGCAAGAACTTGCTCATGGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LPGTPQRFLSQYNLS*GLPGNEGKNLLMGR Trigger: TCTCCCCATGAGCAAGTTCTTGCCTTCATTGCCAGGGAGGCCCCAGCTAAGGTTATACTGGGAAAGGAATCTCTGGGGAGTACCTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS TCA 90 bp | GGCTTTGCAGTACACCAGCTGGAGAGGCTTCCTTTGAGGAGAAGCTaGCCTCTTCCAGGTACTCCCCAGAGATTCCTTTCCCAGTATAAC | + |
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Preference number: 5 (lower is better) Translates to: GFAVHQLERLPLRRS*PLPGTPQRFLSQYN Trigger: GTTATACTGGGAAAGGAATCTCTGGGGAGTACCTGGAAGAGGTCAGCTTCTCCTCAAAGGAAGCCTCTCCAGCTGGTGTACTGCAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS TCA 90 bp | TGGTCTTGGAAGGCTTTGCAGTACACCAGCTGGAGAGGCTTCCTTTaGGGAGAAGCTGACCTCTTCCAGGTACTCCCCAGAGATTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: WSWKALQYTSWRGFL*GEADLFQVLPRDSF Trigger: AAAGGAATCTCTGGGGAGTACCTGGAAGAGGTCAGCTTCTCCTCAAAGGAAGCCTCTCCAGCTGGTGTACTGCAAAGCCTTCCAAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS GCA 90 bp | CTTGCACTTAGTAAGTACTTAACAAGGAGTAGCCGTGATTACTGGTaGTGTCGTCATTACCCAGCAGCGCGTGTCTGCCTCCTGACCTGC | + |
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Preference number: 5 (lower is better) Translates to: LALSKYLTRSSRDYW*CRHYPAARVCLLTC Trigger: GCAGGTCAGGAGGCAGACACGCGCTGCTGGGTAATGACGACAGCACCAGTAATCACGGCTACTCCTTGTTAAGTACTTACTAAGTGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000553017.1 ENST00000639627.1 ENST00000665543.1 |
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| CDS CCA 90 bp | AGAACCTGCCCATTTCTCAAGGCCTATCCTGGCCCTCCTTCACTCTaGAACCTGCCTGATTCCTCTCCCCTAACTTCTTCTGCACCATTA | + |
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Preference number: 5 (lower is better) Translates to: RTCPFLKAYPGPPSL*NLPDSSPLTSSAPL Trigger: TAATGGTGCAGAAGAAGTTAGGGGAGAGGAATCAGGCAGGTTCCAGAGTGAAGGAGGGCCAGGATAGGCCTTGAGAAATGGGCAGGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553017.1 |
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| CDS CCA 90 bp | AGTCTTGCACTTAGTAAGTACTTAACAAGGAGTAGCCGTGATTACTaGTGCTGTCGTCATTACCCAGCAGCGCGTGTCTGCCTCCTGACC | + |
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Preference number: 5 (lower is better) Translates to: SLALSKYLTRSSRDY*CCRHYPAARVCLLT Trigger: GGTCAGGAGGCAGACACGCGCTGCTGGGTAATGACGACAGCACCAGTAATCACGGCTACTCCTTGTTAAGTACTTACTAAGTGCAAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000553017.1 ENST00000639627.1 ENST00000665543.1 |
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| CDS CCA 90 bp | ACCTTAGCTGGGGCCTCCCTGGCAATGAAGGCAAGAACTTGCTCATaGGGAGAGCTGCTCCTCATTGAGAGTTTTATCAGTGAGATTCCT | + |
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Preference number: 5 (lower is better) Translates to: TLAGASLAMKARTCS*GELLLIESFISEIP Trigger: AGGAATCTCACTGATAAAACTCTCAATGAGGAGCAGCTCTCCCCATGAGCAAGTTCTTGCCTTCATTGCCAGGGAGGCCCCAGCTAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS TCA 90 bp | CAGATCTTTGCATCTTACTGTTCATCTTCTGCCTCTGCAGAGCCCTaGATGGGAAGAAATGGGTTCCATGTGCAGCAAGCCAGGAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: QIFASYCSSSASAEP*MGRNGFHVQQARRD Trigger: ATCTCTCCTGGCTTGCTGCACATGGAACCCATTTCTTCCCATTCAGGGCTCTGCAGAGGCAGAAGATGAACAGTAAGATGCAAAGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639627.1 ENST00000656354.1 |
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| CDS CCA 90 bp | TTACTGTTCATCTTCTGCCTCTGCAGAGCCCTGAATGGGAAGAAATaGGTTCCATGTGCAGCAAGCCAGGAGAGATTTAGGCAACGAGAA | + |
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Preference number: 5 (lower is better) Translates to: LLFIFCLCRALNGKK*VPCAASQERFRQRE Trigger: TTCTCGTTGCCTAAATCTCTCCTGGCTTGCTGCACATGGAACCCATTTCTTCCCATTCAGGGCTCTGCAGAGGCAGAAGATGAACAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639627.1 ENST00000656354.1 |
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| CDS TCA 90 bp | AAAGCTGAGGTCCAGAGCAGTTATGTCCACACAATTAGTAAGTGCTaGGAATCAATCCTGGGTTGGTCTCTCTCTGCATCCTTCTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: KAEVQSSYVHTISKC*ESILGWSLSASFCG Trigger: GCCACAGAAGGATGCAGAGAGAGACCAACCCAGGATTGATTCTCAGCACTTACTAATTGTGTGGACATAACTGCTCTGGACCTCAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS CCA 90 bp | ATCCTCCAGGGACTAAACTTCCAGCAAAATAGGCTTAATGAACACTaGAGACTCTCGCAACTAGTGATGACTGTGGCATGTGTAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ILQGLNFQQNRLNEH*RLSQLVMTVACVAL Trigger: CAGAGCTACACATGCCACAGTCATCACTAGTTGCGAGAGTCTCCAGTGTTCATTAAGCCTATTTTGCTGGAAGTTTAGTCCCTGGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS TCA 90 bp | TCCCCAGACTCCAATAAAGGTGGAACATTGGCCCAATCCATGGCATaGATTCTTGAGATTAGACTTCAAGAAGGACTTCCTACTCAACCC | + |
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Preference number: 5 (lower is better) Translates to: SPDSNKGGTLAQSMA*ILEIRLQEGLPTQP Trigger: GGGTTGAGTAGGAAGTCCTTCTTGAAGTCTAATCTCAAGAATTCATGCCATGGATTGGGCCAATGTTCCACCTTTATTGGAGTCTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000551894.6 ENST00000665543.1 |
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| CDS TCA 90 bp | TCCCCAGACTCCAATAAAGGTGGAACATTGGCCCAATCCATGGCATaGATTCTTGAGATTAGACTTCAAGAAGGACTTCCTACTCAACCT | + |
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Preference number: 5 (lower is better) Translates to: SPDSNKGGTLAQSMA*ILEIRLQEGLPTQP Trigger: AGGTTGAGTAGGAAGTCCTTCTTGAAGTCTAATCTCAAGAATTCATGCCATGGATTGGGCCAATGTTCCACCTTTATTGGAGTCTGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000551332.1 |
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| CDS CCA 90 bp | CTAAGTCCCCAGACTCCAATAAAGGTGGAACATTGGCCCAATCCATaGCATGAATTCTTGAGATTAGACTTCAAGAAGGACTTCCTACTC | + |
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Preference number: 5 (lower is better) Translates to: LSPQTPIKVEHWPNP*HEFLRLDFKKDFLL Trigger: GAGTAGGAAGTCCTTCTTGAAGTCTAATCTCAAGAATTCATGCCATGGATTGGGCCAATGTTCCACCTTTATTGGAGTCTGGGGACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000665543.1 |
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| CDS CCA 90 bp | TGCCTTTTCCACCTAAGTCCCCAGACTCCAATAAAGGTGGAACATTaGCCCAATCCATGGCATGAATTCTTGAGATTAGACTTCAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: CLFHLSPQTPIKVEH*PNPWHEFLRLDFKK Trigger: CTTCTTGAAGTCTAATCTCAAGAATTCATGCCATGGATTGGGCCAATGTTCCACCTTTATTGGAGTCTGGGGACTTAGGTGGAAAAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000665543.1 |
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| CDS TCA 72 bp | GAGCCGCTGAGCCCTGCAGGGAGTCCAGCGCCACCATaGTGTCCCTCTCTTCCCTCCTTGAGGCTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: EPLSPAGSPAPP*CPSLPSLRLAG Trigger: CCCAGCCAGCCTCAAGGAGGGAAGAGAGGGACATCATGGTGGCGCTGGACTCCCTGCAGGGCTCAGCGGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639627.1 |
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| CDS CCA 72 bp | CTGAGCCAGTGCCTGGCGCACACAGCCATGAGATCATaGGGCGGGGTAAATTGGCAGGCCCCCGATCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LSQCLAHTAMRS*GGVNWQAPDLP Trigger: GGGGAGATCGGGGGCCTGCCAATTTACCCCGCCCCATGATCTCATGGCTGTGTGCGCCAGGCACTGGCTCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000665543.1 |
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| CDS CCA 72 bp | GGTAAATTGGCAGGCCCCCGATCTCCCCTGGAGCTGTaGCAGGTGCATGTTGGAGCTCTGGGCTTGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: GKLAGPRSPLEL*QVHVGALGLAP Trigger: AGGCGCCAAGCCCAGAGCTCCAACATGCACCTGCCACAGCTCCAGGGGAGATCGGGGGCCTGCCAATTTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000665543.1 |
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| CDS CCA 72 bp | GGGAGAGACTCATGTGTGTTACTGGGGACACAGCGCTaGCACACAGGCTGGTTCCAGAGGCCAGGAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRDSCVLLGTQR*HTGWFQRPGRG Trigger: CCCTCTTCCTGGCCTCTGGAACCAGCCTGTGTGCCAGCGCTGTGTCCCCAGTAACACACATGAGTCTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS CAA 90 bp | TGTGGCCTTGAGCCAGGTCCCCCTCTCCAGGGTTTTGGCCCAGTTTaGGCCTGTGGCCCATCCAAGTATCTTCTCTGTGAGATGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: CGLEPGPPLQGFGPV*ACGPSKYLLCEMLL Trigger: GAGCAGCATCTCACAGAGAAGATACTTGGATGGGCCACAGGCCAAAACTGGGCCAAAACCCTGGAGAGGGGGACCTGGCTCAAGGCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000551332.1 ENST00000665543.1 |
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| CDS TCA 72 bp | CCAACACAACAGCCACACCCTCAGTGTGGGCCTAAGTaGAAGCTAATGGTGGGCAGGGGCAAGGGGTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PTQQPHPQCGPK*KLMVGRGKGCW Trigger: CCAACACCCCTTGCCCCTGCCCACCATTAGCTTTCACTTAGGCCCACACTGAGGGTGTGGCTGTTGTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665543.1 |
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| CDS CAA 72 bp | GAGCCAGGTCCCCCTCTCCAGGGTTTTGGCCCAGTTTaGGCCTGTGGCCCATCCAAGTATCTTCTCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: EPGPPLQGFGPV*ACGPSKYLLCE Trigger: CTCACAGAGAAGATACTTGGATGGGCCACAGGCCAAAACTGGGCCAAAACCCTGGAGAGGGGGACCTGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000551332.1 ENST00000665543.1 |
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| CDS CAA 90 bp | TGGCACACAGGCTGGTTCCAGAGGCCAGGAAGAGGGAACTTGGTCTaGGAAGGCTTTGCAGTACACCAGCTGGAGAGGCTTCCTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: WHTGWFQRPGRGNLV*EGFAVHQLERLPLR Trigger: CCTCAAAGGAAGCCTCTCCAGCTGGTGTACTGCAAAGCCTTCCAAGACCAAGTTCCCTCTTCCTGGCCTCTGGAACCAGCCTGTGTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS CAA 72 bp | GGCTGGTTCCAGAGGCCAGGAAGAGGGAACTTGGTCTaGGAAGGCTTTGCAGTACACCAGCTGGAGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GWFQRPGRGNLV*EGFAVHQLERL Trigger: AAGCCTCTCCAGCTGGTGTACTGCAAAGCCTTCCAAGACCAAGTTCCCTCTTCCTGGCCTCTGGAACCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS GCA 72 bp | GAGGCCAGGAAGAGGGAACTTGGTCTTGGAAGGCTTTaGAGTACACCAGCTGGAGAGGCTTCCTTTGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: EARKRELGLGRL*STPAGEASFEE Trigger: CTCCTCAAAGGAAGCCTCTCCAGCTGGTGTACTGCAAAGCCTTCCAAGACCAAGTTCCCTCTTCCTGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS CAA 72 bp | GGCCCCAGGGACCCAGCTCTGAAGGTTGCCAGATCTTaGCATCTTACTGTTCATCTTCTGCCTCTGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GPRDPALKVARS*HLTVHLLPLQS Trigger: GCTCTGCAGAGGCAGAAGATGAACAGTAAGATGCAAAGATCTGGCAACCTTCAGAGCTGGGTCCCTGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639627.1 |
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| CDS CAA 90 bp | TTCTGCAGAGGCCCCAGGGACCCAGCTCTGAAGGTTGCCAGATCTTaGCATCTTACTGTTCATCTTCTGCCTCTGCAGAGCCCTGAATGG | + |
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Preference number: 6 (lower is better) Translates to: FCRGPRDPALKVARS*HLTVHLLPLQSPEW Trigger: CCATTCAGGGCTCTGCAGAGGCAGAAGATGAACAGTAAGATGCAAAGATCTGGCAACCTTCAGAGCTGGGTCCCTGGGGCCTCTGCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639627.1 |
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| CDS TCA 72 bp | GTACACCAGCTGGAGAGGCTTCCTTTGAGGAGAAGCTaGCCTCTTCCAGGTACTCCCCAGAGATTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VHQLERLPLRRS*PLPGTPQRFLS Trigger: GGAAAGGAATCTCTGGGGAGTACCTGGAAGAGGTCAGCTTCTCCTCAAAGGAAGCCTCTCCAGCTGGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS TCA 72 bp | AAGGCTTTGCAGTACACCAGCTGGAGAGGCTTCCTTTaGGGAGAAGCTGACCTCTTCCAGGTACTCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: KALQYTSWRGFL*GEADLFQVLPR Trigger: TCTGGGGAGTACCTGGAAGAGGTCAGCTTCTCCTCAAAGGAAGCCTCTCCAGCTGGTGTACTGCAAAGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS TCA 72 bp | GCATCTTACTGTTCATCTTCTGCCTCTGCAGAGCCCTaGATGGGAAGAAATGGGTTCCATGTGCAGCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ASYCSSSASAEP*MGRNGFHVQQA Trigger: GGCTTGCTGCACATGGAACCCATTTCTTCCCATTCAGGGCTCTGCAGAGGCAGAAGATGAACAGTAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639627.1 ENST00000656354.1 |
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| CDS GCA 72 bp | AGTAAGTACTTAACAAGGAGTAGCCGTGATTACTGGTaGTGTCGTCATTACCCAGCAGCGCGTGTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SKYLTRSSRDYW*CRHYPAARVCL Trigger: GAGGCAGACACGCGCTGCTGGGTAATGACGACAGCACCAGTAATCACGGCTACTCCTTGTTAAGTACTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000553017.1 ENST00000639627.1 ENST00000665543.1 |
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| CDS CCA 72 bp | ATCTTCTGCCTCTGCAGAGCCCTGAATGGGAAGAAATaGGTTCCATGTGCAGCAAGCCAGGAGAGATTTAGG | + |
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Preference number: 6 (lower is better) Translates to: IFCLCRALNGKK*VPCAASQERFR Trigger: CCTAAATCTCTCCTGGCTTGCTGCACATGGAACCCATTTCTTCCCATTCAGGGCTCTGCAGAGGCAGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639627.1 ENST00000656354.1 |
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| CDS CCA 72 bp | CTTACTGTTCATCTTCTGCCTCTGCAGAGCCCTGAATaGGAAGAAATGGGTTCCATGTGCAGCAAGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LTVHLLPLQSPE*EEMGSMCSKPG Trigger: TCCTGGCTTGCTGCACATGGAACCCATTTCTTCCCATTCAGGGCTCTGCAGAGGCAGAAGATGAACAGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639627.1 ENST00000656354.1 |
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| CDS GCA 72 bp | TGTAGCTCTGTGAGAACATCTGTCCAGCTCAGTTGGTaGCACTGGAAAATGACATGGAAATGTGGTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: CSSVRTSVQLSW*HWKMTWKCGVA Trigger: GGCCACACCACATTTCCATGTCATTTTCCAGTGGCACCAACTGAGCTGGACAGATGTTCTCACAGAGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000551332.1 ENST00000665543.1 |
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| CDS CCA 72 bp | CTTAGTAAGTACTTAACAAGGAGTAGCCGTGATTACTaGTGCTGTCGTCATTACCCAGCAGCGCGTGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSKYLTRSSRDY*CCRHYPAARVC Trigger: GCAGACACGCGCTGCTGGGTAATGACGACAGCACCAGTAATCACGGCTACTCCTTGTTAAGTACTTACTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000553017.1 ENST00000639627.1 ENST00000665543.1 |
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| CDS CCA 72 bp | TCTGTGAGAACATCTGTCCAGCTCAGTTGGTGCCACTaGAAAATGACATGGAAATGTGGTGTGGCCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SVRTSVQLSWCH*KMTWKCGVALS Trigger: GCTCAAGGCCACACCACATTTCCATGTCATTTTCCAGTGGCACCAACTGAGCTGGACAGATGTTCTCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000551332.1 ENST00000665543.1 |
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| CDS TCA 72 bp | GTCCAGAGCAGTTATGTCCACACAATTAGTAAGTGCTaGGAATCAATCCTGGGTTGGTCTCTCTCTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: VQSSYVHTISKC*ESILGWSLSAS Trigger: GGATGCAGAGAGAGACCAACCCAGGATTGATTCTCAGCACTTACTAATTGTGTGGACATAACTGCTCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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| CDS GCA 72 bp | CCAGATCTTTGCATCTTACTGTTCATCTTCTGCCTCTaGAGAGCCCTGAATGGGAAGAAATGGGTTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: PDLCILLFIFCL*RALNGKKWVPC Trigger: ACATGGAACCCATTTCTTCCCATTCAGGGCTCTGCAGAGGCAGAAGATGAACAGTAAGATGCAAAGATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639627.1 ENST00000656354.1 |
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| CDS GCA 72 bp | ATGTGTAGCTCTGTGAGAACATCCAGCTCTGAAGGTTaGCAGATCTTTGCATCTTACTGTTCATCTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: MCSSVRTSSSEG*QIFASYCSSSA Trigger: GGCAGAAGATGAACAGTAAGATGCAAAGATCTGGCAACCTTCAGAGCTGGATGTTCTCACAGAGCTACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656354.1 |
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| CDS CCA 72 bp | CACCTAAGTCCCCAGACTCCAATAAAGGTGGAACATTaGCCCAATCCATGGCATGAATTCTTGAGATTAGAC | + |
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Preference number: 6 (lower is better) Translates to: HLSPQTPIKVEH*PNPWHEFLRLD Trigger: GTCTAATCTCAAGAATTCATGCCATGGATTGGGCCAATGTTCCACCTTTATTGGAGTCTGGGGACTTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000665543.1 |
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| CDS CAA 72 bp | AGGCAAGAACTTGCTCATGGGGAGAGCTGCTCCTCATaGAGAGTTTTATCAGTGAGATTCCTTGATTATCAA | + |
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Preference number: 6 (lower is better) Translates to: RQELAHGESCSS*RVLSVRFLDYQ Trigger: TTGATAATCAAGGAATCTCACTGATAAAACTCTCAATGAGGAGCAGCTCTCCCCATGAGCAAGTTCTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000551332.1 ENST00000551894.6 ENST00000639627.1 ENST00000656354.1 ENST00000665543.1 |
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