RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02873 (Homo sapiens)

Ensembl gene IDs: ENSG00000175728

Ensembl transcript IDs: ENST00000317019.2

Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CTGTCTCTTGGGGAGGCGGTGGGACAGGAGAGGGCATGGAAGTCCTaGCTCCCACACTGGCTCTCTCTGGGGATCTCTTCCATCTCATCC +
Preference number: 5 (lower is better)
Translates to: LSLGEAVGQERAWKS*LPHWLSLGISSISS
Trigger: GGATGAGATGGAAGAGATCCCCAGAGAGAGCCAGTGTGGGAGGCAGGACTTCCATGCCCTCTCCTGTCCCACCGCCTCCCCAAGAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 90 bp GGCCCTGCCTCCATCCGGCAGCACATGCAGCCCATGGTCAGGATCTaGAACCTGCAGAAGACATCAGTCCAGCAGATATGTTCAAGCGGG +
Preference number: 5 (lower is better)
Translates to: GPASIRQHMQPMVRI*NLQKTSVQQICSSG
Trigger: CCCGCTTGAACATATCTGCTGGACTGATGTCTTCTGCAGGTTGCAGATCCTGACCATGGGCTGCATGTGCTGCCGGATGGAGGCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 90 bp GAAGAAAACACTCAGGGCATGGCCCTGCCTCCATCCGGCAGCACATaGAGCCCATGGTCAGGATCTGCAACCTGCAGAAGACATCAGTCC +
Preference number: 5 (lower is better)
Translates to: EENTQGMALPPSGST*SPWSGSATCRRHQS
Trigger: GGACTGATGTCTTCTGCAGGTTGCAGATCCTGACCATGGGCTGCATGTGCTGCCGGATGGAGGCAGGGCCATGCCCTGAGTGTTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 90 bp CAACGCTACTGGTGCCATGTGAAGAAAACACTCAGGGCATGGCCCTaGCTCCATCCGGCAGCACATGCAGCCCATGGTCAGGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: QRYWCHVKKTLRAWP*LHPAAHAAHGQDLQ
Trigger: TTGCAGATCCTGACCATGGGCTGCATGTGCTGCCGGATGGAGGCAGGGCCATGCCCTGAGTGTTTTCTTCACATGGCACCAGTAGCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CCA 90 bp CACACACAACGCTACTGGTGCCATGTGAAGAAAACACTCAGGGCATaGCCCTGCCTCCATCCGGCAGCACATGCAGCCCATGGTCAGGAT +
Preference number: 5 (lower is better)
Translates to: HTQRYWCHVKKTLRA*PCLHPAAHAAHGQD
Trigger: ATCCTGACCATGGGCTGCATGTGCTGCCGGATGGAGGCAGGGCCATGCCCTGAGTGTTTTCTTCACATGGCACCAGTAGCGTTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 90 bp AGTGATGTGGTCATGACCAGATCCCTCCAAGATGACCTGGAAAGCTaGGTCCACCTGAGCTCACAGGACGGCTGGAGCTGGGCCAGAATG +
Preference number: 5 (lower is better)
Translates to: SDVVMTRSLQDDLES*VHLSSQDGWSWARM
Trigger: CATTCTGGCCCAGCTCCAGCCGTCCTGTGAGCTCAGGTGGACTCAGCTTTCCAGGTCATCTTGGAGGGATCTGGTCATGACCACATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 90 bp CCTCCATCCGGCAGCACATGCAGCCCATGGTCAGGATCTGCAACCTaGAGAAGACATCAGTCCAGCAGATATGTTCAAGCGGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: PPSGSTCSPWSGSAT*RRHQSSRYVQAGSS
Trigger: GCTTGAACCCGCTTGAACATATCTGCTGGACTGATGTCTTCTGCAGGTTGCAGATCCTGACCATGGGCTGCATGTGCTGCCGGATGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 90 bp ATCTGTCTCCTGTCCCACCCAAAAGTACCAGATTCCAGGAGGGTCTaGGCCAGACTGAACTGGACTTTCCTCTCCTACATGTGTCATCTT +
Preference number: 5 (lower is better)
Translates to: ICLLSHPKVPDSRRV*ARLNWTFLSYMCHL
Trigger: AAGATGACACATGTAGGAGAGGAAAGTCCAGTTCAGTCTGGCTCAGACCCTCCTGGAATCTGGTACTTTTGGGTGGGACAGGAGACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 90 bp TCTACAATTTTATCAGAAATCACACACAACGCTACTGGTGCCATGTaGAGAAAACACTCAGGGCATGGCCCTGCCTCCATCCGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: STILSEITHNATGAM*RKHSGHGPASIRQH
Trigger: GTGCTGCCGGATGGAGGCAGGGCCATGCCCTGAGTGTTTTCTTCACATGGCACCAGTAGCGTTGTGTGTGATTTCTGATAAAATTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 90 bp GCCCAGCTAGCATCTGGTCGGAATAAAATTCCAATCGGCCCTTGCTaGCTGGATCTAGAGATTACACCCAAGGCTGACTGTGGCAATTTT +
Preference number: 5 (lower is better)
Translates to: AQLASGRNKIPIGPC*LDLEITPKADCGNF
Trigger: AAAATTGCCACAGTCAGCCTTGGGTGTAATCTCTAGATCCAGGCAGCAAGGGCCGATTGGAATTTTATTCCGACCAGATGCTAGCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 90 bp TCAAAGAGTTCCAGCATGGGGGTGATCTCAAAGTCCCCTGATCATTaGATCCTAGAGCTGGAGAGACTGCAGAGGTCATCTTGTCCCAAA +
Preference number: 5 (lower is better)
Translates to: SKSSSMGVISKSPDH*ILELERLQRSSCPK
Trigger: TTTGGGACAAGATGACCTCTGCAGTCTCTCCAGCTCTAGGATTCAATGATCAGGGGACTTTGAGATCACCCCCATGCTGGAACTCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 90 bp GAAAAGAGCATCCTCAGGGAGGCTGTGCATCCAGAACAAATAGAGTaGTCCTCAATATCTACTGCGGCCCATGACTACATACAAAAAGGG +
Preference number: 5 (lower is better)
Translates to: EKSILREAVHPEQIE*SSISTAAHDYIQKG
Trigger: CCCTTTTTGTATGTAGTCATGGGCCGCAGTAGATATTGAGGATCACTCTATTTGTTCTGGATGCACAGCCTCCCTGAGGATGCTCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 90 bp ATCTGGCAGAAAGTTGGGCATCACTTCTATTCCCAGGCACCAATCTaGACAAACACCTTCAAGGTTCAGGCTAAAGCTCAATGTCAGGAT +
Preference number: 5 (lower is better)
Translates to: IWQKVGHHFYSQAPI*TNTFKVQAKAQCQD
Trigger: ATCCTGACATTGAGCTTTAGCCTGAACCTTGAAGGTGTTTGTTCAGATTGGTGCCTGGGAATAGAAGTGATGCCCAACTTTCTGCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 90 bp CTTATCTTCCAGGACAATCCGTTTGAGCATGGCTGCAAAGAGAAGTaGTTCTTTCCTTTCCCATGGAAATGCTTCAAAGAGTTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: LIFQDNPFEHGCKEK*FFPFPWKCFKEFQH
Trigger: ATGCTGGAACTCTTTGAAGCATTTCCATGGGAAAGGAAAGAATCACTTCTCTTTGCAGCCATGCTCAAACGGATTGTCCTGGAAGATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 72 bp ACTCAGGGCATGGCCCTGCCTCCATCCGGCAGCACATaGAGCCCATGGTCAGGATCTGCAACCTGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: TQGMALPPSGST*SPWSGSATCRR
Trigger: TCTTCTGCAGGTTGCAGATCCTGACCATGGGCTGCATGTGCTGCCGGATGGAGGCAGGGCCATGCCCTGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 72 bp GATCCCTCCAAGATGACCTGGAAAGCTGAGTCCACCTaGGCTCACAGGACGGCTGGAGCTGGGCCAGAATGG +
Preference number: 6 (lower is better)
Translates to: DPSKMTWKAEST*AHRTAGAGPEW
Trigger: CCATTCTGGCCCAGCTCCAGCCGTCCTGTGAGCTCAGGTGGACTCAGCTTTCCAGGTCATCTTGGAGGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 72 bp TGGTGCCATGTGAAGAAAACACTCAGGGCATGGCCCTaGCTCCATCCGGCAGCACATGCAGCCCATGGTCAG +
Preference number: 6 (lower is better)
Translates to: WCHVKKTLRAWP*LHPAAHAAHGQ
Trigger: CTGACCATGGGCTGCATGTGCTGCCGGATGGAGGCAGGGCCATGCCCTGAGTGTTTTCTTCACATGGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CCA 72 bp GGACAGGAGAGGGCATGGAAGTCCTGCCTCCCACACTaGCTCTCTCTGGGGATCTCTTCCATCTCATCCAGC +
Preference number: 6 (lower is better)
Translates to: GQERAWKSCLPH*LSLGISSISSS
Trigger: GCTGGATGAGATGGAAGAGATCCCCAGAGAGAGCCAGTGTGGGAGGCAGGACTTCCATGCCCTCTCCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 72 bp GTCATGACCAGATCCCTCCAAGATGACCTGGAAAGCTaGGTCCACCTGAGCTCACAGGACGGCTGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VMTRSLQDDLES*VHLSSQDGWSW
Trigger: CCAGCTCCAGCCGTCCTGTGAGCTCAGGTGGACTCAGCTTTCCAGGTCATCTTGGAGGGATCTGGTCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 72 bp GGCAGCACATGCAGCCCATGGTCAGGATCTGCAACCTaGAGAAGACATCAGTCCAGCAGATATGTTCAAGCG +
Preference number: 6 (lower is better)
Translates to: GSTCSPWSGSAT*RRHQSSRYVQA
Trigger: CGCTTGAACATATCTGCTGGACTGATGTCTTCTGCAGGTTGCAGATCCTGACCATGGGCTGCATGTGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 72 bp TCCATCCGGCAGCACATGCAGCCCATGGTCAGGATCTaGAACCTGCAGAAGACATCAGTCCAGCAGATATGT +
Preference number: 6 (lower is better)
Translates to: SIRQHMQPMVRI*NLQKTSVQQIC
Trigger: ACATATCTGCTGGACTGATGTCTTCTGCAGGTTGCAGATCCTGACCATGGGCTGCATGTGCTGCCGGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 72 bp CTGTCCCACCCAAAAGTACCAGATTCCAGGAGGGTCTaGGCCAGACTGAACTGGACTTTCCTCTCCTACATG +
Preference number: 6 (lower is better)
Translates to: LSHPKVPDSRRV*ARLNWTFLSYM
Trigger: CATGTAGGAGAGGAAAGTCCAGTTCAGTCTGGCTCAGACCCTCCTGGAATCTGGTACTTTTGGGTGGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 72 bp GCTGGAAATAAGCCAGACTCCAGAGTGATGTGGTCATaGCCAGATCCCTCCAAGATGACCTGGAAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: AGNKPDSRVMWS*PDPSKMTWKAE
Trigger: CTCAGCTTTCCAGGTCATCTTGGAGGGATCTGGTCATGACCACATCACTCTGGAGTCTGGCTTATTTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 72 bp ATACGCAATGCTATCCTCTGGACCACCTGGAGACCTTaGTACAGACAGTCCCCTCTGTGGGAGTCTAAGATC +
Preference number: 6 (lower is better)
Translates to: IRNAILWTTWRP*YRQSPLWESKI
Trigger: GATCTTAGACTCCCACAGAGGGGACTGTCTGTATCAAGGTCTCCAGGTGGTCCAGAGGATAGCATTGCGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CAA 72 bp CAAGCGGGTTCAAGCGGGTTCAAGGGATTAGACGCCTaGCATCTTAGGGTCAAGTTCATTACTGGGATGGAG +
Preference number: 6 (lower is better)
Translates to: QAGSSGFKGLDA*HLRVKFITGME
Trigger: CTCCATCCCAGTAATGAACTTGACCCTAAGATGCAAGGCGTCTAATCCCTTGAACCCGCTTGAACCCGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 72 bp AAAGAGTTCCAGCATGGGGGTGATCTCAAAGTCCCCTaGTCATTGAATCCTAGAGCTGGAGAGACTGCAGAG +
Preference number: 6 (lower is better)
Translates to: KEFQHGGDLKVP*SLNPRAGETAE
Trigger: CTCTGCAGTCTCTCCAGCTCTAGGATTCAATGATCAGGGGACTTTGAGATCACCCCCATGCTGGAACTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 72 bp GCATCTGGTCGGAATAAAATTCCAATCGGCCCTTGCTaGCTGGATCTAGAGATTACACCCAAGGCTGACTGT +
Preference number: 6 (lower is better)
Translates to: ASGRNKIPIGPC*LDLEITPKADC
Trigger: ACAGTCAGCCTTGGGTGTAATCTCTAGATCCAGGCAGCAAGGGCCGATTGGAATTTTATTCCGACCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 72 bp CTAGCATCTGGTCGGAATAAAATTCCAATCGGCCCTTaGTGCCTGGATCTAGAGATTACACCCAAGGCTGAC +
Preference number: 6 (lower is better)
Translates to: LASGRNKIPIGP*CLDLEITPKAD
Trigger: GTCAGCCTTGGGTGTAATCTCTAGATCCAGGCAGCAAGGGCCGATTGGAATTTTATTCCGACCAGATGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 72 bp GGAGTTGGAAGAAGCAGCCTAGACAGGCTCCTTTCCTaGAATGATAACGGTTCCTACAGTCCTCTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: GVGRSSLDRLLS*NDNGSYSPLGE
Trigger: TTCTCCAAGAGGACTGTAGGAACCGTTATCATTGCAGGAAAGGAGCCTGTCTAGGCTGCTTCTTCCAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CCA 72 bp AGACAGTCCCCTCTGTGGGAGTCTAAGATCTACATCTaGCAGAAAGTTGGGCATCACTTCTATTCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: RQSPLWESKIYI*QKVGHHFYSQA
Trigger: TGCCTGGGAATAGAAGTGATGCCCAACTTTCTGCCAGATGTAGATCTTAGACTCCCACAGAGGGGACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CAA 90 bp CTGAGCCAGACTGAACTGGACTTTCCTCTCCTACATGTGTCATCTTaGCTTATCTTCCAGGACAATCCGTTTGAGCATGGCTGCAAAGAG +
Preference number: 6 (lower is better)
Translates to: LSQTELDFPLLHVSS*LIFQDNPFEHGCKE
Trigger: CTCTTTGCAGCCATGCTCAAACGGATTGTCCTGGAAGATAAGCAAAGATGACACATGTAGGAGAGGAAAGTCCAGTTCAGTCTGGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CAA 90 bp AGATATGTTCAAGCGGGTTCAAGCGGGTTCAAGGGATTAGACGCCTaGCATCTTAGGGTCAAGTTCATTACTGGGATGGAGTTGGAAGAA +
Preference number: 6 (lower is better)
Translates to: RYVQAGSSGFKGLDA*HLRVKFITGMELEE
Trigger: TTCTTCCAACTCCATCCCAGTAATGAACTTGACCCTAAGATGCAAGGCGTCTAATCCCTTGAACCCGCTTGAACCCGCTTGAACATATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS GCA 72 bp GAGGAGTGGTATAGAACAAGGGCAGTCACAAATGATTaGAGAGTCACAATTGCAACTCTCATCTGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: EEWYRTRAVTND*RVTIATLICLP
Trigger: AGGGAGGCAGATGAGAGTTGCAATTGTGACTCTGCAATCATTTGTGACTGCCCTTGTTCTATACCACTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CAA 72 bp GGGTTTCTGTCATTCAGTTGGATAGAGGCCTATCTATaGCACAAGATGCCTCTGTTCTTTGTCCATGCTACT +
Preference number: 6 (lower is better)
Translates to: GFLSFSWIEAYL*HKMPLFFVHAT
Trigger: AGTAGCATGGACAAAGAACAGAGGCATCTTGTGCAATAGATAGGCCTCTATCCAACTGAATGACAGAAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CCA 72 bp GGCCACAAAATAGAAATATTGAAGAGGGCAGAGGAGTaGTATAGAACAAGGGCAGTCACAAATGATTGCAGA +
Preference number: 6 (lower is better)
Translates to: GHKIEILKRAEE*YRTRAVTNDCR
Trigger: TCTGCAATCATTTGTGACTGCCCTTGTTCTATACCACTCCTCTGCCCTCTTCAATATTTCTATTTTGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CAA 72 bp AATGCAGATGTAATGACAAAAATTGGAGCCACTGTCTaGGGCCACAAAATAGAAATATTGAAGAGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: NADVMTKIGATV*GHKIEILKRAE
Trigger: CTCTGCCCTCTTCAATATTTCTATTTTGTGGCCCAAGACAGTGGCTCCAATTTTTGTCATTACATCTGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CAA 72 bp AGCTTGTTGAGTCAGAATTCAAAGGAGGTTTATTTGTaGCTTGAGCCTAAACTCATCTCTTTTCACAGCATC +
Preference number: 6 (lower is better)
Translates to: SLLSQNSKEVYL*LEPKLISFHSI
Trigger: GATGCTGTGAAAAGAGATGAGTTTAGGCTCAAGCAACAAATAAACCTCCTTTGAATTCTGACTCAACAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CAA 72 bp ATTAGCTTGTTGAGTCAGAATTCAAAGGAGGTTTATTaGTTGCTTGAGCCTAAACTCATCTCTTTTCACAGC +
Preference number: 6 (lower is better)
Translates to: ISLLSQNSKEVY*LLEPKLISFHS
Trigger: GCTGTGAAAAGAGATGAGTTTAGGCTCAAGCAACAAATAAACCTCCTTTGAATTCTGACTCAACAAGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CAA 90 bp TTACAAGCTATTAGCTTGTTGAGTCAGAATTCAAAGGAGGTTTATTaGTTGCTTGAGCCTAAACTCATCTCTTTTCACAGCATCATACTA +
Preference number: 6 (lower is better)
Translates to: LQAISLLSQNSKEVY*LLEPKLISFHSIIL
Trigger: TAGTATGATGCTGTGAAAAGAGATGAGTTTAGGCTCAAGCAACAAATAAACCTCCTTTGAATTCTGACTCAACAAGCTAATAGCTTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS TCA 72 bp GCAACAATTAGGCAGTTCTTTCTAGGTACCAAACACTaGGCAGAGCATTTAACATGGATTATTCATTTAATC +
Preference number: 6 (lower is better)
Translates to: ATIRQFFLGTKH*AEHLTWIIHLI
Trigger: GATTAAATGAATAATCCATGTTAAATGCTCTGCTCAGTGTTTGGTACCTAGAAAGAACTGCCTAATTGTTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317019.2
CDS CAA 72 bp AAAAGGGCACGAAGCACTCTACACACATCACTCATTTaGTTCTGTTTACAATTCTTGGAAGTCTTTGTTATT +
Preference number: 6 (lower is better)
Translates to: KRARSTLHTSLI*FCLQFLEVFVI
Trigger: AATAACAAAGACTTCCAAGAATTGTAAACAGAACAAAATGAGTGATGTGTGTAGAGTGCTTCGTGCCCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317019.2