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Pregenerated sensors for LINC02870 (Homo sapiens)

Ensembl gene IDs: ENSG00000180066

Ensembl transcript IDs: ENST00000392630.7, ENST00000490765.4

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CGGCAGTGGGCGGAGAGGGTCCTCTCCCCTTGGGTCAGCCCGGCCTaGCCTCCCAGGCTCACCGCCTGCCCCTTGAGGGCCCAGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RQWAERVLSPWVSPA*PPRLTACPLRAQSR
Trigger: GCGGCTCTGGGCCCTCAAGGGGCAGGCGGTGAGCCTGGGAGGCCAGGCCGGGCTGACCCAAGGGGAGAGGACCCTCTCCGCCCACTGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS CCA 90 bp GGTGTGAGATGGGTGGGGCCAGGCAGAGCTGGGCTCCCTCAGGCCTaGGAGGGGCCGAGGTCCCAGTGGTTAGGGCAGCCTCATCTGGGA +
Preference number: 5 (lower is better)
Translates to: GVRWVGPGRAGLPQA*EGPRSQWLGQPHLG
Trigger: TCCCAGATGAGGCTGCCCTAACCACTGGGACCTCGGCCCCTCCCAGGCCTGAGGGAGCCCAGCTCTGCCTGGCCCCACCCATCTCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS CCA 90 bp GGCAGAGCTGGGCTCCCTCAGGCCTGGGAGGGGCCGAGGTCCCAGTaGTTAGGGCAGCCTCATCTGGGAAAGGGACCCTCCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GRAGLPQAWEGPRSQ*LGQPHLGKGPSFSF
Trigger: GAAGGAGAAGGAGGGTCCCTTTCCCAGATGAGGCTGCCCTAACCACTGGGACCTCGGCCCCTCCCAGGCCTGAGGGAGCCCAGCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS TCA 90 bp CACAGGCCCAGCCCAGAACTGGCTCTTCCAGCCGCCTGTGAGGCTTaGTCTACCACGGGAGCTGCCTCAGCCAGGTCTGGGCCACTGGAG +
Preference number: 5 (lower is better)
Translates to: HRPSPELALPAACEA*STTGAASARSGPLE
Trigger: CTCCAGTGGCCCAGACCTGGCTGAGGCAGCTCCCGTGGTAGATCAAGCCTCACAGGCGGCTGGAAGAGCCAGTTCTGGGCTGGGCCTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS TCA 90 bp CTGTTCCCACAGGCCCAGCCCAGAACTGGCTCTTCCAGCCGCCTGTaGGGCTTGATCTACCACGGGAGCTGCCTCAGCCAGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LFPQAQPRTGSSSRL*GLIYHGSCLSQVWA
Trigger: GGCCCAGACCTGGCTGAGGCAGCTCCCGTGGTAGATCAAGCCTCACAGGCGGCTGGAAGAGCCAGTTCTGGGCTGGGCCTGTGGGAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS CCA 90 bp TGCCTCTGCCCTCTGCCTTCTCCCGGAGATAAGGGATTGTGCCTCTaGAGACCCCCAGGCTCTAGACCTGCCCAGGGCCAGCGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: CLCPLPSPGDKGLCL*RPPGSRPAQGQRQW
Trigger: CCACTGCCGCTGGCCCTGGGCAGGTCTAGAGCCTGGGGGTCTCCAGAGGCACAATCCCTTATCTCCGGGAGAAGGCAGAGGGCAGAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS GCA 90 bp GTTTCCTGCCTCTGCCCTCTGCCTTCTCCCGGAGATAAGGGATTGTaGCTCTGGAGACCCCCAGGCTCTAGACCTGCCCAGGGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: VSCLCPLPSPGDKGL*LWRPPGSRPAQGQR
Trigger: CCGCTGGCCCTGGGCAGGTCTAGAGCCTGGGGGTCTCCAGAGGCACAATCCCTTATCTCCGGGAGAAGGCAGAGGGCAGAGGCAGGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS CCA 90 bp GCGTCCAGCAAGCTCCCAGGGAGGACACGCCAGGCACTGGGCCCATaGACACGCTGGAGGCTTTCTGCAGGGCTGGTTCTCTTGTCCCAT +
Preference number: 5 (lower is better)
Translates to: ASSKLPGRTRQALGP*TRWRLSAGLVLLSH
Trigger: ATGGGACAAGAGAACCAGCCCTGCAGAAAGCCTCCAGCGTGTCCATGGGCCCAGTGCCTGGCGTGTCCTCCCTGGGAGCTTGCTGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490765.4
CDS GCA 90 bp GAGGACACGCCAGGCACTGGGCCCATGGACACGCTGGAGGCTTTCTaGAGGGCTGGTTCTCTTGTCCCATCAGTGTCTGTGTGGGGTCAC +
Preference number: 5 (lower is better)
Translates to: EDTPGTGPMDTLEAF*RAGSLVPSVSVWGH
Trigger: GTGACCCCACACAGACACTGATGGGACAAGAGAACCAGCCCTGCAGAAAGCCTCCAGCGTGTCCATGGGCCCAGTGCCTGGCGTGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490765.4
CDS TCA 90 bp CGCCATTCCCCGCTTCAGGCTTCGAAGGCCGCATTCCTGAAACCCTaGCTAACAGACGCCTGTTCCCACAGGCCCAGCCCAGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: RHSPLQASKAAFLKP*LTDACSHRPSPELA
Trigger: AGCCAGTTCTGGGCTGGGCCTGTGGGAACAGGCGTCTGTTAGTCAGGGTTTCAGGAATGCGGCCTTCGAAGCCTGAAGCGGGGAATGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS GCA 90 bp CATGGACACGCTCTCAGCTCCTGGGAGGAAACTCCACATTTCAGCTaGTTTATACCCAGAGAAGCCTCCTGCCTCCCTTCCCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: HGHALSSWEETPHFS*FIPREASCLPSQSW
Trigger: CCAGGACTGGGAAGGGAGGCAGGAGGCTTCTCTGGGTATAAAGCAGCTGAAATGTGGAGTTTCCTCCCAGGAGCTGAGAGCGTGTCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS TCA 90 bp TCTCGGGCTGTAATTAACCGTCTTGTTAGCCCTGGCTGTCGGGGCTaGTTTTCCCTTATTCTCTCAGTGTCCGGTGTTTCAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SRAVINRLVSPGCRG*FSLILSVSGVSAWS
Trigger: GCTCCAGGCTGAAACACCGGACACTGAGAGAATAAGGGAAAATCAGCCCCGACAGCCAGGGCTAACAAGACGGTTAATTACAGCCCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS GCA 90 bp AGTATTTTAATTAGGAATTTTGACAGGAGATTTGTTTCCTGCCTCTaGCCTCTGCCTTCTCCCGGAGATAAGGGATTGTGCCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SILIRNFDRRFVSCL*PLPSPGDKGLCLWR
Trigger: TCTCCAGAGGCACAATCCCTTATCTCCGGGAGAAGGCAGAGGGCAGAGGCAGGAAACAAATCTCCTGTCAAAATTCCTAATTAAAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS CCA 72 bp GGGCTCCCTCAGGCCTGGGAGGGGCCGAGGTCCCAGTaGTTAGGGCAGCCTCATCTGGGAAAGGGACCCTCC +
Preference number: 6 (lower is better)
Translates to: GLPQAWEGPRSQ*LGQPHLGKGPS
Trigger: GGAGGGTCCCTTTCCCAGATGAGGCTGCCCTAACCACTGGGACCTCGGCCCCTCCCAGGCCTGAGGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS CCA 72 bp AAGCTCCCAGGGAGGACACGCCAGGCACTGGGCCCATaGACACGCTGGAGGCTTTCTGCAGGGCTGGTTCTC +
Preference number: 6 (lower is better)
Translates to: KLPGRTRQALGP*TRWRLSAGLVL
Trigger: GAGAACCAGCCCTGCAGAAAGCCTCCAGCGTGTCCATGGGCCCAGTGCCTGGCGTGTCCTCCCTGGGAGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490765.4
CDS CCA 72 bp CCTCTGCCTTCTCCCGGAGATAAGGGATTGTGCCTCTaGAGACCCCCAGGCTCTAGACCTGCCCAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: PLPSPGDKGLCL*RPPGSRPAQGQ
Trigger: CTGGCCCTGGGCAGGTCTAGAGCCTGGGGGTCTCCAGAGGCACAATCCCTTATCTCCGGGAGAAGGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS CCA 72 bp GGGAGGACACGCCAGGCACTGGGCCCATGGACACGCTaGAGGCTTTCTGCAGGGCTGGTTCTCTTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: GRTRQALGPWTR*RLSAGLVLLSH
Trigger: ATGGGACAAGAGAACCAGCCCTGCAGAAAGCCTCCAGCGTGTCCATGGGCCCAGTGCCTGGCGTGTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490765.4
CDS GCA 72 bp CTCTGCCCTCTGCCTTCTCCCGGAGATAAGGGATTGTaGCTCTGGAGACCCCCAGGCTCTAGACCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: LCPLPSPGDKGL*LWRPPGSRPAQ
Trigger: CTGGGCAGGTCTAGAGCCTGGGGGTCTCCAGAGGCACAATCCCTTATCTCCGGGAGAAGGCAGAGGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS CCA 72 bp GACCCCAGAGGGAATGAGCAGGGAGCCTTGAGGGTCTaGAGGAGGAATTCAGAGAGGCAGGAAGCCGGGGAG +
Preference number: 6 (lower is better)
Translates to: DPRGNEQGALRV*RRNSERQEAGE
Trigger: CTCCCCGGCTTCCTGCCTCTCTGAATTCCTCCTCCAGACCCTCAAGGCTCCCTGCTCATTCCCTCTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490765.4
CDS TCA 72 bp CCGCTTCAGGCTTCGAAGGCCGCATTCCTGAAACCCTaGCTAACAGACGCCTGTTCCCACAGGCCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: PLQASKAAFLKP*LTDACSHRPSP
Trigger: TGGGCTGGGCCTGTGGGAACAGGCGTCTGTTAGTCAGGGTTTCAGGAATGCGGCCTTCGAAGCCTGAAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS CCA 72 bp TGCAGGGCTGGTTCTCTTGTCCCATCAGTGTCTGTGTaGGGTCACCCTGTTCCCCTAGGAGGGTGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: CRAGSLVPSVSV*GHPVPLGGWVC
Trigger: GCAGACCCACCCTCCTAGGGGAACAGGGTGACCCCACACAGACACTGATGGGACAAGAGAACCAGCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490765.4
CDS CCA 72 bp TGGGCCCATGGACACGCTGGAGGCTTTCTGCAGGGCTaGTTCTCTTGTCCCATCAGTGTCTGTGTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: WAHGHAGGFLQG*FSCPISVCVGS
Trigger: TGACCCCACACAGACACTGATGGGACAAGAGAACCAGCCCTGCAGAAAGCCTCCAGCGTGTCCATGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490765.4
CDS CAA 72 bp GGGCTGACGCAGAGAAAGCGCTCTCGTGGTCTGGGGTaGGCCTTGATGAGAAATGGGCGACGTGCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: GLTQRKRSRGLG*ALMRNGRRASC
Trigger: ACAAGAAGCACGTCGCCCATTTCTCATCAAGGCCAACCCCAGACCACGAGAGCGCTTTCTCTGCGTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392630.7
ENST00000490765.4
CDS CAA 72 bp TGGACACGCTGGAGGCTTTCTGCAGGGCTGGTTCTCTaGTCCCATCAGTGTCTGTGTGGGGTCACCCTGTTC +
Preference number: 6 (lower is better)
Translates to: WTRWRLSAGLVL*SHQCLCGVTLF
Trigger: GAACAGGGTGACCCCACACAGACACTGATGGGACAAGAGAACCAGCCCTGCAGAAAGCCTCCAGCGTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490765.4
CDS CAA 90 bp CTGGGGCTGACGCAGAGAAAGCGCTCTCGTGGTCTGGGGTTGGCCTaGATGAGAAATGGGCGACGTGCTTCTTGTCTGAGGTTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: LGLTQRKRSRGLGLA*MRNGRRASCLRFLC
Trigger: ACAGAGAAACCTCAGACAAGAAGCACGTCGCCCATTTCTCATCAAGGCCAACCCCAGACCACGAGAGCGCTTTCTCTGCGTCAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392630.7
ENST00000490765.4
CDS CAA 72 bp ACGCAGAGAAAGCGCTCTCGTGGTCTGGGGTTGGCCTaGATGAGAAATGGGCGACGTGCTTCTTGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: TQRKRSRGLGLA*MRNGRRASCLR
Trigger: CCTCAGACAAGAAGCACGTCGCCCATTTCTCATCAAGGCCAACCCCAGACCACGAGAGCGCTTTCTCTGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392630.7
ENST00000490765.4
CDS GCA 72 bp GCTCTCAGCTCCTGGGAGGAAACTCCACATTTCAGCTaGTTTATACCCAGAGAAGCCTCCTGCCTCCCTTCC +
Preference number: 6 (lower is better)
Translates to: ALSSWEETPHFS*FIPREASCLPS
Trigger: GGAAGGGAGGCAGGAGGCTTCTCTGGGTATAAAGCAGCTGAAATGTGGAGTTTCCTCCCAGGAGCTGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392630.7
CDS TCA 72 bp GTAATTAACCGTCTTGTTAGCCCTGGCTGTCGGGGCTaGTTTTCCCTTATTCTCTCAGTGTCCGGTGTTTCA +
Preference number: 6 (lower is better)
Translates to: VINRLVSPGCRG*FSLILSVSGVS
Trigger: TGAAACACCGGACACTGAGAGAATAAGGGAAAATCAGCCCCGACAGCCAGGGCTAACAAGACGGTTAATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392630.7