Pregenerated sensors for LINC02869 (Homo sapiens)

Ensembl gene IDs: ENSG00000228208

Ensembl transcript IDs: ENST00000443836.5, ENST00000491260.2, ENST00000663551.1, ENST00000668967.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GAAGACTCAGGGCTTCCAGCCGATAGATGTTTTCCACACAGGAGATaGAAGAGCAGGTACAGCCTGGGTTTCTTTCAATGGGAAGGAAGA	+
Preference number: 5 (lower is better) Translates to: EDSGLPADRCFPHRR*KSRYSLGFFQWEGR Trigger: TCTTCCTTCCCATTGAAAGAAACCCAGGCTGTACCTGCTCTTTCATCTCCTGTGTGGAAAACATCTATCGGCTGGAAGCCCTGAGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000443836.5 ENST00000491260.2 ENST00000663551.1 ENST00000668967.1
CDS CCA 90 bp	CCGATAGATGTTTTCCACACAGGAGATGAAAGAGCAGGTACAGCCTaGGTTTCTTTCAATGGGAAGGAAGAGCAATTGGTTGCGGTCTGT	+
Preference number: 5 (lower is better) Translates to: PIDVFHTGDERAGTA*VSFNGKEEQLVAVC Trigger: ACAGACCGCAACCAATTGCTCTTCCTTCCCATTGAAAGAAACCCAGGCTGTACCTGCTCTTTCATCTCCTGTGTGGAAAACATCTATCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443836.5
CDS CCA 90 bp	CCGATAGATGTTTTCCACACAGGAGATGAAAGAGCAGGTACAGCCTaGGTTTCTTTCAATGGGAAGGAAGAGCAATTGGTTGCGGTCTTT	+
Preference number: 5 (lower is better) Translates to: PIDVFHTGDERAGTA*VSFNGKEEQLVAVF Trigger: AAAGACCGCAACCAATTGCTCTTCCTTCCCATTGAAAGAAACCCAGGCTGTACCTGCTCTTTCATCTCCTGTGTGGAAAACATCTATCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491260.2
CDS CCA 90 bp	CCGATAGATGTTTTCCACACAGGAGATGAAAGAGCAGGTACAGCCTaGGTTTCTTTCAATGGGAAGGAAGAGCAATTGGTTGCGGTATTG	+
Preference number: 5 (lower is better) Translates to: PIDVFHTGDERAGTA*VSFNGKEEQLVAVL Trigger: CAATACCGCAACCAATTGCTCTTCCTTCCCATTGAAAGAAACCCAGGCTGTACCTGCTCTTTCATCTCCTGTGTGGAAAACATCTATCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663551.1 ENST00000668967.1
CDS GCA 90 bp	GCATGCAATGGTTTAACTTTTCTCCCACTGGACATATCCTTGCTCTaGCGCCTTCCTGTACCAACAGTTTTTGTCATCCCTTTCAGAATT	+
Preference number: 5 (lower is better) Translates to: ACNGLTFLPLDISLL*RLPVPTVFVIPFRI Trigger: AATTCTGAAAGGGATGACAAAAACTGTTGGTACAGGAAGGCGGCAGAGCAAGGATATGTCCAGTGGGAGAAAAGTTAAACCATTGCATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000491260.2
CDS TCA 72 bp	GGGCTTCCAGCCGATAGATGTTTTCCACACAGGAGATaGAAGAGCAGGTACAGCCTGGGTTTCTTTCAATGG	+
Preference number: 6 (lower is better) Translates to: GLPADRCFPHRR*KSRYSLGFFQW Trigger: CCATTGAAAGAAACCCAGGCTGTACCTGCTCTTTCATCTCCTGTGTGGAAAACATCTATCGGCTGGAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000443836.5 ENST00000491260.2 ENST00000663551.1 ENST00000668967.1

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