Pregenerated sensors for LINC02866 (Homo sapiens)
Ensembl gene IDs: ENSG00000253665Ensembl transcript IDs: ENST00000521257.1
Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGTAGAACCAAACTCGAAGTGACTCAGGGGAGAGTAAAGACAAGCTaGACCCATTCCAGCTGGCTCCTGACTCGGCAAAAGAGCAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: SRTKLEVTQGRVKTS*THSSWLLTRQKSKV Trigger: TACTTTGCTCTTTTGCCGAGTCAGGAGCCAGCTGGAATGGGTTCAGCTTGTCTTTACTCTCCCCTGAGTCACTTCGAGTTTGGTTCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521257.1 |
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| CDS TCA 90 bp | AATTCTACCAACACCTTGATTTTGGACGTCCAGCCTCCAGAACTGTaGAGCAATAAATTTCTGTTGTCTAAGCCACCCAGTTGGTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: NSTNTLILDVQPPEL*SNKFLLSKPPSWWH Trigger: GTGCCACCAACTGGGTGGCTTAGACAACAGAAATTTATTGCTTCACAGTTCTGGAGGCTGGACGTCCAAAATCAAGGTGTTGGTAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521257.1 |
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| CDS TCA 90 bp | AAGAGCAAAGTAAGAAACCCGACTGGCTTCACCAATAGCAGGGTTTaGAGAGGAAGATTAATTAACAGGTCGTTGAGAAGGGAAATTAAG | + |
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Preference number: 5 (lower is better) Translates to: KSKVRNPTGFTNSRV*RGRLINRSLRREIK Trigger: CTTAATTTCCCTTCTCAACGACCTGTTAATTAATCTTCCTCTTCAAACCCTGCTATTGGTGAAGCCAGTCGGGTTTCTTACTTTGCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521257.1 |
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| CDS TCA 72 bp | AAACTCGAAGTGACTCAGGGGAGAGTAAAGACAAGCTaGACCCATTCCAGCTGGCTCCTGACTCGGCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: KLEVTQGRVKTS*THSSWLLTRQK Trigger: CTTTTGCCGAGTCAGGAGCCAGCTGGAATGGGTTCAGCTTGTCTTTACTCTCCCCTGAGTCACTTCGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521257.1 |
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| CDS TCA 72 bp | CACAGTCCTCAGAAGGAACCAATTCTACCAACACCTTaGTTTTGGACGTCCAGCCTCCAGAACTGTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: HSPQKEPILPTP*FWTSSLQNCEA Trigger: TGCTTCACAGTTCTGGAGGCTGGACGTCCAAAATCAAGGTGTTGGTAGAATTGGTTCCTTCTGAGGACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521257.1 |
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| CDS TCA 72 bp | CGAGAGCTGGTAAAGACATATGGGAAGACTGTCCCTTaGATTCAGTGGTGGGAAGAAGCTTCCTGTAGATCA | + |
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Preference number: 6 (lower is better) Translates to: RELVKTYGKTVP*IQWWEEASCRS Trigger: TGATCTACAGGAAGCTTCTTCCCACCACTGAATTCAAGGGACAGTCTTCCCATATGTCTTTACCAGCTCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521257.1 |
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| CDS CAA 72 bp | GCCAGTCTGAATGACATAGACAGGCTCTGTCTTCATTaGCGAGAGCTGGTAAAGACATATGGGAAGACTGTC | + |
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Preference number: 6 (lower is better) Translates to: ASLNDIDRLCLH*RELVKTYGKTV Trigger: GACAGTCTTCCCATATGTCTTTACCAGCTCTCGCAAATGAAGACAGAGCCTGTCTATGTCATTCAGACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521257.1 |
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| CDS TCA 72 bp | GTAAGAAACCCGACTGGCTTCACCAATAGCAGGGTTTaGAGAGGAAGATTAATTAACAGGTCGTTGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VRNPTGFTNSRV*RGRLINRSLRR Trigger: CCTTCTCAACGACCTGTTAATTAATCTTCCTCTTCAAACCCTGCTATTGGTGAAGCCAGTCGGGTTTCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521257.1 |
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| CDS TCA 72 bp | AACACCTTGATTTTGGACGTCCAGCCTCCAGAACTGTaGAGCAATAAATTTCTGTTGTCTAAGCCACCCAGT | + |
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Preference number: 6 (lower is better) Translates to: NTLILDVQPPEL*SNKFLLSKPPS Trigger: ACTGGGTGGCTTAGACAACAGAAATTTATTGCTTCACAGTTCTGGAGGCTGGACGTCCAAAATCAAGGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521257.1 |
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