Pregenerated sensors for LINC02864 (Homo sapiens)
Ensembl gene IDs: ENSG00000263711Ensembl transcript IDs: ENST00000581011.5, ENST00000581862.6, ENST00000582571.2, ENST00000583405.5, ENST00000584544.5, ENST00000584671.1, ENST00000654686.1, ENST00000661525.1, ENST00000667943.1, ENST00000669547.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAGCTGACACTCAGTGGCAGCTTGCCCTCCTCCAATGGGAACGGTaGCTCTCATCAGTCCCCATCGCCACTGTAGGGACATCATGTACA | + |
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Preference number: 5 (lower is better) Translates to: AADTQWQLALLQWER*LSSVPIATVGTSCT Trigger: TGTACATGATGTCCCTACAGTGGCGATGGGGACTGATGAGAGCCACCGTTCCCATTGGAGGAGGGCAAGCTGCCACTGAGTGTCAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CCA 90 bp | TTTACTCCAGCAGCTGACACTCAGTGGCAGCTTGCCCTCCTCCAATaGGAACGGTGGCTCTCATCAGTCCCCATCGCCACTGTAGGGACA | + |
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Preference number: 5 (lower is better) Translates to: FTPAADTQWQLALLQ*ERWLSSVPIATVGT Trigger: TGTCCCTACAGTGGCGATGGGGACTGATGAGAGCCACCGTTCCCATTGGAGGAGGGCAAGCTGCCACTGAGTGTCAGCTGCTGGAGTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CCA 90 bp | GCATCTACTGATGGCCTTCTTACTGCGTCATCCCATGGTGGAAGGTaGAAGTGGAAGAGAGCCAGCATGCCTGGGCGAGCCGTTGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: ASTDGLLTASSHGGR*KWKRASMPGRAVGD Trigger: ATCACCAACGGCTCGCCCAGGCATGCTGGCTCTCTTCCACTTCCACCTTCCACCATGGGATGACGCAGTAAGAAGGCCATCAGTAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000581011.5 ENST00000581862.6 ENST00000582571.2 ENST00000583405.5 ENST00000584544.5 ENST00000584671.1 ENST00000654686.1 ENST00000661525.1 ENST00000667943.1 ENST00000669547.1 |
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| CDS CCA 90 bp | ATTGAATCCAGGCAGCCTGGCTCTGTTCATCTGGGGGAGTTGCTCTaGGAAGGCCCTCATTTCCTCTTCTGCTCATCTACTCTGAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: IESRQPGSVHLGELL*EGPHFLFCSSTLSG Trigger: CCCACTCAGAGTAGATGAGCAGAAGAGGAAATGAGGGCCTTCCCAGAGCAACTCCCCCAGATGAACAGAGCCAGGCTGCCTGGATTCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS CCA 90 bp | GAACAGCGTGGGAGACACTGCCCCTGTGATTCAATTACCTCCCACTaGGTCCAGCAGCAGGACACATGGGGATTATGGGTTCAAGATGAG | + |
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Preference number: 5 (lower is better) Translates to: EQRGRHCPCDSITSH*VQQQDTWGLWVQDE Trigger: CTCATCTTGAACCCATAATCCCCATGTGTCCTGCTGCTGGACCCAGTGGGAGGTAATTGAATCACAGGGGCAGTGTCTCCCACGCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000581862.6 ENST00000669547.1 |
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| CDS TCA 90 bp | GAACAGAGAGCTCAAATACCTGACAACATGGCAGGGAGTGAGCCATaGACATCTAGAAGGGGCATCCATGCCAGACACAAGCGGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: EQRAQIPDNMAGSEP*TSRRGIHARHKRQL Trigger: GAGCTGCCGCTTGTGTCTGGCATGGATGCCCCTTCTAGATGTTCATGGCTCACTCCCTGCCATGTTGTCAGGTATTTGAGCTCTCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS CCA 90 bp | GCTCTGGGAAGGCCCTCATTTCCTCTTCTGCTCATCTACTCTGAGTaGGAACAGAGAGCTCAAATACCTGACAACATGGCAGGGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: ALGRPSFPLLLIYSE*EQRAQIPDNMAGSE Trigger: CTCACTCCCTGCCATGTTGTCAGGTATTTGAGCTCTCTGTTCCCACTCAGAGTAGATGAGCAGAAGAGGAAATGAGGGCCTTCCCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS CCA 90 bp | AGAGGGAGGAGGGAGGGGCCGGCCTCTTTTGACAACCAGCTTTCATaGGAAGTACTAGAAGGAGAACTCATTCATTACCCTGAGGATGGT | + |
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Preference number: 5 (lower is better) Translates to: RGRREGPASFDNQLS*EVLEGELIHYPEDG Trigger: ACCATCCTCAGGGTAATGAATGAGTTCTCCTTCTAGTACTTCCCATGAAAGCTGGTTGTCAAAAGAGGCCGGCCCCTCCCTCCTCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654686.1 |
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| CDS CCA 90 bp | TGGAGGCATAAAGTTCTGCGTCTGGAAAGTTCAAGGTTGAGGGACTaGCATCTACTGATGGCCTTCTTACTGCGTCATCCCATGGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: WRHKVLRLESSRLRD*HLLMAFLLRHPMVE Trigger: TTCCACCATGGGATGACGCAGTAAGAAGGCCATCAGTAGATGCCAGTCCCTCAACCTTGAACTTTCCAGACGCAGAACTTTATGCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000581011.5 ENST00000581862.6 ENST00000583405.5 ENST00000584544.5 ENST00000661525.1 |
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| CDS CCA 90 bp | GAAATGAAGATAACATTGAATCCAGGCAGCCTGGCTCTGTTCATCTaGGGGAGTTGCTCTGGGAAGGCCCTCATTTCCTCTTCTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: EMKITLNPGSLALFI*GSCSGKALISSSAH Trigger: ATGAGCAGAAGAGGAAATGAGGGCCTTCCCAGAGCAACTCCCCCAGATGAACAGAGCCAGGCTGCCTGGATTCAATGTTATCTTCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS TCA 90 bp | CCAGTGGCAGAGTCGAGTAGAGTAGCTGCGACGAGACTACAAAGTTaGAACTATCTCCCAGCTGATCCTTTGCAGAAAAAGTTTGCCACC | + |
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Preference number: 5 (lower is better) Translates to: PVAESSRVAATRLQS*NYLPADPLQKKFAT Trigger: GGTGGCAAACTTTTTCTGCAAAGGATCAGCTGGGAGATAGTTTCAACTTTGTAGTCTCGTCGCAGCTACTCTACTCGACTCTGCCACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS TCA 90 bp | TACCAAAGGCTAATGGGAGAATGGTCTGTTTCTCTGTACCAAGTCTaGGTGTGTGCTGATCTGCAGCTTCACCAGCCTCAGAGGAAGACT | + |
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Preference number: 5 (lower is better) Translates to: YQRLMGEWSVSLYQV*VCADLQLHQPQRKT Trigger: AGTCTTCCTCTGAGGCTGGTGAAGCTGCAGATCAGCACACACTCAGACTTGGTACAGAGAAACAGACCATTCTCCCATTAGCCTTTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581862.6 ENST00000669547.1 |
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| CDS CCA 90 bp | GTGATTGGACACCATAGAAATTGTTCAGGGAGATTCCAAGGTTGCTaGCTTGAATCGCAGGTAGTATGGGCTCCACAGAACTCACTCAGG | + |
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Preference number: 5 (lower is better) Translates to: VIGHHRNCSGRFQGC*LESQVVWAPQNSLR Trigger: CCTGAGTGAGTTCTGTGGAGCCCATACTACCTGCGATTCAAGCCAGCAACCTTGGAATCTCCCTGAACAATTTCTATGGTGTCCAATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581011.5 ENST00000584544.5 |
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| CDS CCA 90 bp | TATGAGGGGAAGCCAATATCCATAGGATACAGGTACACATGTGATTaGATGTTTACTCCAGCAGCTGACACTCAGTGGCAGCTTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: YEGKPISIGYRYTCD*MFTPAADTQWQLAL Trigger: GAGGGCAAGCTGCCACTGAGTGTCAGCTGCTGGAGTAAACATCCAATCACATGTGTACCTGTATCCTATGGATATTGGCTTCCCCTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS GCA 90 bp | AGTCATCTTAAAATTACCCTGTGTCCATTCCCATGGCCAGGCCTGTaGTCTTTCCAAACCCAAGATCTGTGTTCCCATGAGACCAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: SHLKITLCPFPWPGL*SFQTQDLCSHETSQ Trigger: TTGACTGGTCTCATGGGAACACAGATCTTGGGTTTGGAAAGAGCACAGGCCTGGCCATGGGAATGGACACAGGGTAATTTTAAGATGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS GCA 90 bp | GAGAATGGTCTGTTTCTCTGTACCAAGTCTGAGTGTGTGCTGATCTaGAGCTTCACCAGCCTCAGAGGAAGACTAGTTTCTCATGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: ENGLFLCTKSECVLI*SFTSLRGRLVSHVN Trigger: ATTGACATGAGAAACTAGTCTTCCTCTGAGGCTGGTGAAGCTGCAGATCAGCACACACTCAGACTTGGTACAGAGAAACAGACCATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581862.6 ENST00000669547.1 |
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| CDS CCA 90 bp | TGTTCAGGGAGATTCCAAGGTTGCTGGCTTGAATCGCAGGTAGTATaGGCTCCACAGAACTCACTCAGGCTCAAATTGTTCTACATATTT | + |
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Preference number: 5 (lower is better) Translates to: CSGRFQGCWLESQVV*APQNSLRLKLFYIF Trigger: AAATATGTAGAACAATTTGAGCCTGAGTGAGTTCTGTGGAGCCCATACTACCTGCGATTCAAGCCAGCAACCTTGGAATCTCCCTGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581011.5 ENST00000584544.5 |
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| CDS GCA 90 bp | TTTGGGCTGTCTAGGCTGCTGGTTGCGAGACTGTCTTACTATTTGTaGATTATCCAAGAAGTACAGGGAGCAGTGGTACATTTACCTATT | + |
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Preference number: 5 (lower is better) Translates to: FGLSRLLVARLSYYL*IIQEVQGAVVHLPI Trigger: AATAGGTAAATGTACCACTGCTCCCTGTACTTCTTGGATAATGCACAAATAGTAAGACAGTCTCGCAACCAGCAGCCTAGACAGCCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CCA 90 bp | CTGGCACTTGTTGCAGAAATTGAGAAACAGCTCTTTGCAATCATCTaGAAATGCAAGAAACCCACAACAGCCAAAACAACCAGCCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: LALVAEIEKQLFAII*KCKKPTTAKTTSLR Trigger: TCTCAGGCTGGTTGTTTTGGCTGTTGTGGGTTTCTTGCATTTCCAGATGATTGCAAAGAGCTGTTTCTCAATTTCTGCAACAAGTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581011.5 ENST00000584544.5 |
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| CDS GCA 90 bp | GTGACTAAAGTTTCACTGGAAAACTTTCATTCTTTTATTCATGACTaGATTCACACTCCAGTGGCAGAGTCGAGTAGAGTAGCTGCGACG | + |
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Preference number: 5 (lower is better) Translates to: VTKVSLENFHSFIHD*IHTPVAESSRVAAT Trigger: CGTCGCAGCTACTCTACTCGACTCTGCCACTGGAGTGTGAATGCAGTCATGAATAAAAGAATGAAAGTTTTCCAGTGAAACTTTAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CCA 90 bp | CTGGCACTTGTTGCAGAAATTGAGAAACAGCTCTTTGCAATCATCTaGAAATGCAAGAAACCCACAACAGCCAAAACAACCTGGCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LALVAEIEKQLFAII*KCKKPTTAKTTWQE Trigger: TTCTTGCCAGGTTGTTTTGGCTGTTGTGGGTTTCTTGCATTTCCAGATGATTGCAAAGAGCTGTTTCTCAATTTCTGCAACAAGTGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581862.6 |
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| CDS TCA 90 bp | CCTCAGAGGAAGACTAGTTTCTCATGTCAATTGTTCTACTGCGTCTaGAACTTTATAAATCAGACACAGCTCCATCCTTGGCCTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: PQRKTSFSCQLFYCV*NFINQTQLHPWPQN Trigger: ATTCTGAGGCCAAGGATGGAGCTGTGTCTGATTTATAAAGTTTCAGACGCAGTAGAACAATTGACATGAGAAACTAGTCTTCCTCTGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581862.6 ENST00000669547.1 |
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| CDS CCA 90 bp | GCAATCATCTGGAAATGCAAGAAACCCACAACAGCCAAAACAACCTaGCAAGAAAGAACAAAGGTGAAGGACATATACTACCCTGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: AIIWKCKKPTTAKTT*QERTKVKDIYYPVS Trigger: TGAAACAGGGTAGTATATGTCCTTCACCTTTGTTCTTTCTTGCCAGGTTGTTTTGGCTGTTGTGGGTTTCTTGCATTTCCAGATGATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581862.6 |
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| CDS GCA 90 bp | CTTGTTGCAGAAATTGAGAAACAGCTCTTTGCAATCATCTGGAAATaGAAGAAACCCACAACAGCCAAAACAACCTGGCAAGAAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: LVAEIEKQLFAIIWK*KKPTTAKTTWQERT Trigger: TGTTCTTTCTTGCCAGGTTGTTTTGGCTGTTGTGGGTTTCTTGCATTTCCAGATGATTGCAAAGAGCTGTTTCTCAATTTCTGCAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581862.6 |
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| CDS GCA 90 bp | ATATACAAGAGGAACCTGGACCATTTTGCTGTAACAGTAAGAAAGTaGTCAACACACACACACACACACACACACACACTATGGGAATTA | + |
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Preference number: 5 (lower is better) Translates to: IYKRNLDHFAVTVRK*STHTHTHTHTLWEL Trigger: TAATTCCCATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAGCACTTTCTTACTGTTACAGCAAAATGGTCCAGGTTCCTCTTGTATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667943.1 |
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| CDS CCA 90 bp | GTAAGAAAGTGCTCAACACACACACACACACACACACACACACTATaGGAATTATGTCAAAGAATACAAGAGTTAACTGAAAAAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: VRKCSTHTHTHTHTL*ELCQRIQELTEKAS Trigger: GGATGCTTTTTCAGTTAACTCTTGTATTCTTTGACATAATTCCCATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAGCACTTTCTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667943.1 |
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| CDS TCA 90 bp | AGAAACCCACAACAGCCAAAACAACCTGGCAAGAAAGAACAAAGGTaGAGGACATATACTACCCTGTTTCAAAACTTAATACAAAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: RNPQQPKQPGKKEQR*RTYTTLFQNLIQSY Trigger: ATAGCTTTGTATTAAGTTTTGAAACAGGGTAGTATATGTCCTTCACCTTTGTTCTTTCTTGCCAGGTTGTTTTGGCTGTTGTGGGTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581862.6 |
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| CDS CCA 90 bp | GACTGTCTTACTATTTGTGCATTATCCAAGAAGTACAGGGAGCAGTaGTACATTTACCTATTCATGTACTATCATAATGGGCATAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: DCLTICALSKKYREQ*YIYLFMYYHNGHKG Trigger: TCCTTTATGCCCATTATGATAGTACATGAATAGGTAAATGTACCACTGCTCCCTGTACTTCTTGGATAATGCACAAATAGTAAGACAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS TCA 90 bp | CCTATGGTGGTACATAGAGGAAAGGAGTGTGGAATGATTATATCATaGATTTTCTCATGTGTATTTAATGGTTGTGGTACTATATTGGCA | + |
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Preference number: 5 (lower is better) Translates to: PMVVHRGKECGMIIS*IFSCVFNGCGTILA Trigger: TGCCAATATAGTACCACAACCATTAAATACACATGAGAAAATTCATGATATAATCATTCCACACTCCTTTCCTCTATGTACCACCATAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581862.6 |
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| CDS CCA 72 bp | GCAGCTGACACTCAGTGGCAGCTTGCCCTCCTCCAATaGGAACGGTGGCTCTCATCAGTCCCCATCGCCACT | + |
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Preference number: 6 (lower is better) Translates to: AADTQWQLALLQ*ERWLSSVPIAT Trigger: AGTGGCGATGGGGACTGATGAGAGCCACCGTTCCCATTGGAGGAGGGCAAGCTGCCACTGAGTGTCAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CCA 72 bp | ACTCAGTGGCAGCTTGCCCTCCTCCAATGGGAACGGTaGCTCTCATCAGTCCCCATCGCCACTGTAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: TQWQLALLQWER*LSSVPIATVGT Trigger: TGTCCCTACAGTGGCGATGGGGACTGATGAGAGCCACCGTTCCCATTGGAGGAGGGCAAGCTGCCACTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CAA 72 bp | TGCCAGACACAAGCGGCAGCTCCACAAGCGGGGGTGTaGCATCCTCTACCATTTGCATGTGCAATCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: CQTQAAAPQAGV*HPLPFACAIWT Trigger: GGTCCAGATTGCACATGCAAATGGTAGAGGATGCAACACCCCCGCTTGTGGAGCTGCCGCTTGTGTCTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000581011.5 ENST00000581862.6 ENST00000583405.5 ENST00000584544.5 ENST00000661525.1 |
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| CDS CAA 72 bp | GAATCCAGGCAGCCTGGCTCTGTTCATCTGGGGGAGTaGCTCTGGGAAGGCCCTCATTTCCTCTTCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ESRQPGSVHLGE*LWEGPHFLFCS Trigger: TGAGCAGAAGAGGAAATGAGGGCCTTCCCAGAGCAACTCCCCCAGATGAACAGAGCCAGGCTGCCTGGATTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS GCA 72 bp | AATCCAGGCAGCCTGGCTCTGTTCATCTGGGGGAGTTaGTCTGGGAAGGCCCTCATTTCCTCTTCTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: NPGSLALFIWGS*SGKALISSSAH Trigger: ATGAGCAGAAGAGGAAATGAGGGCCTTCCCAGAGCAACTCCCCCAGATGAACAGAGCCAGGCTGCCTGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS CCA 72 bp | AGGCAGCCTGGCTCTGTTCATCTGGGGGAGTTGCTCTaGGAAGGCCCTCATTTCCTCTTCTGCTCATCTACT | + |
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Preference number: 6 (lower is better) Translates to: RQPGSVHLGELL*EGPHFLFCSST Trigger: AGTAGATGAGCAGAAGAGGAAATGAGGGCCTTCCCAGAGCAACTCCCCCAGATGAACAGAGCCAGGCTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS CCA 72 bp | TCCCACTGGGTCCAGCAGCAGGACACATGGGGATTATaGGTTCAAGATGAGATTTGGGTGGGGACACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SHWVQQQDTWGL*VQDEIWVGTQP Trigger: TGGCTGTGTCCCCACCCAAATCTCATCTTGAACCCATAATCCCCATGTGTCCTGCTGCTGGACCCAGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000581862.6 ENST00000669547.1 |
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| CDS TCA 72 bp | TCTATCATGAGAACAGCGTGGGAGACACTGCCCCTGTaGTTCAATTACCTCCCACTGGGTCCAGCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SIMRTAWETLPL*FNYLPLGPAAG Trigger: TCCTGCTGCTGGACCCAGTGGGAGGTAATTGAATCACAGGGGCAGTGTCTCCCACGCTGTTCTCATGATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581862.6 ENST00000669547.1 |
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| CDS CAA 72 bp | GAGCGTCTCAGTGGAGGCCTAGAGGTGATTCAGAACTaGCATCTCTGTCACGCAGTAATGCGGAGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ERLSGGLEVIQN*HLCHAVMRSLF Trigger: GAAGAGGCTCCGCATTACTGCGTGACAGAGATGCAAGTTCTGAATCACCTCTAGGCCTCCACTGAGACGCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582571.2 |
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| CDS GCA 72 bp | GGGGAGTTGCTCTGGGAAGGCCCTCATTTCCTCTTCTaGTCATCTACTCTGAGTGGGAACAGAGAGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GELLWEGPHFLF*SSTLSGNRELK Trigger: TTTGAGCTCTCTGTTCCCACTCAGAGTAGATGAGCAGAAGAGGAAATGAGGGCCTTCCCAGAGCAACTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS CCA 72 bp | ATAACATTGAATCCAGGCAGCCTGGCTCTGTTCATCTaGGGGAGTTGCTCTGGGAAGGCCCTCATTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ITLNPGSLALFI*GSCSGKALISS Trigger: AGAGGAAATGAGGGCCTTCCCAGAGCAACTCCCCCAGATGAACAGAGCCAGGCTGCCTGGATTCAATGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS CCA 72 bp | TCAATTACCTCCCACTGGGTCCAGCAGCAGGACACATaGGGATTATGGGTTCAAGATGAGATTTGGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SITSHWVQQQDT*GLWVQDEIWVG Trigger: CCCCACCCAAATCTCATCTTGAACCCATAATCCCCATGTGTCCTGCTGCTGGACCCAGTGGGAGGTAATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581862.6 ENST00000669547.1 |
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| CDS CAA 90 bp | GATAACATTGAATCCAGGCAGCCTGGCTCTGTTCATCTGGGGGAGTaGCTCTGGGAAGGCCCTCATTTCCTCTTCTGCTCATCTACTCTG | + |
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Preference number: 6 (lower is better) Translates to: DNIESRQPGSVHLGE*LWEGPHFLFCSSTL Trigger: CAGAGTAGATGAGCAGAAGAGGAAATGAGGGCCTTCCCAGAGCAACTCCCCCAGATGAACAGAGCCAGGCTGCCTGGATTCAATGTTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS TCA 72 bp | GCTCAAATACCTGACAACATGGCAGGGAGTGAGCCATaGACATCTAGAAGGGGCATCCATGCCAGACACAAG | + |
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Preference number: 6 (lower is better) Translates to: AQIPDNMAGSEP*TSRRGIHARHK Trigger: CTTGTGTCTGGCATGGATGCCCCTTCTAGATGTTCATGGCTCACTCCCTGCCATGTTGTCAGGTATTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000584544.5 ENST00000661525.1 |
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| CDS CAA 72 bp | GAAACTATCTCCCAGCTGATCCTTTGCAGAAAAAGTTaGCCACCCACTGGCCTAGACTGTGGTGGATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: ETISQLILCRKS*PPTGLDCGGSL Trigger: CAGGGATCCACCACAGTCTAGGCCAGTGGGTGGCAAACTTTTTCTGCAAAGGATCAGCTGGGAGATAGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS TCA 72 bp | CACTGTAGGGACATCATGTACAAACCCAGAGGCCTGTaGGACCCTGAACAGGCTGATAGGATCTTCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: HCRDIMYKPRGL*DPEQADRIFSL Trigger: CAAACTGAAGATCCTATCAGCCTGTTCAGGGTCTCACAGGCCTCTGGGTTTGTACATGATGTCCCTACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS TCA 72 bp | CTAATGGGAGAATGGTCTGTTTCTCTGTACCAAGTCTaGGTGTGTGCTGATCTGCAGCTTCACCAGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LMGEWSVSLYQV*VCADLQLHQPQ Trigger: CTGAGGCTGGTGAAGCTGCAGATCAGCACACACTCAGACTTGGTACAGAGAAACAGACCATTCTCCCATTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581862.6 ENST00000669547.1 |
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| CDS GCA 72 bp | AAAATTACCCTGTGTCCATTCCCATGGCCAGGCCTGTaGTCTTTCCAAACCCAAGATCTGTGTTCCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: KITLCPFPWPGL*SFQTQDLCSHE Trigger: CTCATGGGAACACAGATCTTGGGTTTGGAAAGAGCACAGGCCTGGCCATGGGAATGGACACAGGGTAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CCA 72 bp | AAAGTTCTGCGTCTGGAAAGTTCAAGGTTGAGGGACTaGCATCTACTGATGGCCTTCTTACTGCGTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: KVLRLESSRLRD*HLLMAFLLRHP Trigger: GGGATGACGCAGTAAGAAGGCCATCAGTAGATGCCAGTCCCTCAACCTTGAACTTTCCAGACGCAGAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000581011.5 ENST00000581862.6 ENST00000582571.2 ENST00000583405.5 ENST00000584544.5 ENST00000661525.1 |
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| CDS CAA 72 bp | AGGAGTGCACTAGTTCTGCGTCTGGAAAGTTCAAGGTaGAGGGACTGGCATCTACTGATGGCCTTCTTACTG | + |
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Preference number: 6 (lower is better) Translates to: RSALVLRLESSR*RDWHLLMAFLL Trigger: CAGTAAGAAGGCCATCAGTAGATGCCAGTCCCTCAACCTTGAACTTTCCAGACGCAGAACTAGTGCACTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667943.1 |
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| CDS TCA 72 bp | CTGTCCCATGCCAGATCCCAAAGGGAAGGCTGTGGGTaGAACATTCAAGAGGCTTGGAGATTTAAGACTCAA | + |
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Preference number: 6 (lower is better) Translates to: LSHARSQREGCG*NIQEAWRFKTQ Trigger: TTGAGTCTTAAATCTCCAAGCCTCTTGAATGTTTCACCCACAGCCTTCCCTTTGGGATCTGGCATGGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS GCA 72 bp | CTGTTTCTCTGTACCAAGTCTGAGTGTGTGCTGATCTaGAGCTTCACCAGCCTCAGAGGAAGACTAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LFLCTKSECVLI*SFTSLRGRLVS Trigger: AGAAACTAGTCTTCCTCTGAGGCTGGTGAAGCTGCAGATCAGCACACACTCAGACTTGGTACAGAGAAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581862.6 ENST00000669547.1 |
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| CDS CCA 72 bp | AGATTCCAAGGTTGCTGGCTTGAATCGCAGGTAGTATaGGCTCCACAGAACTCACTCAGGCTCAAATTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RFQGCWLESQVV*APQNSLRLKLF Trigger: GAACAATTTGAGCCTGAGTGAGTTCTGTGGAGCCCATACTACCTGCGATTCAAGCCAGCAACCTTGGAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000581011.5 ENST00000584544.5 |
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| CDS CCA 72 bp | GACTTCAGGCTGCTTCCACTCATGACAGAAGGTGAATaGGAGTTTGCATGTGCAAAGATCACACAACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: DFRLLPLMTEGE*EFACAKITQQE Trigger: CTCCTGTTGTGTGATCTTTGCACATGCAAACTCCCATTCACCTTCTGTCATGAGTGGAAGCAGCCTGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654686.1 |
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| CDS CAA 90 bp | CAAACCCAAGATCTGTGTTCCCATGAGACCAGTCAAAGTTGTGATTaGGCCTTAGTGATGATACAGCCACCCCTGGGATCAACATTTGAG | + |
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Preference number: 6 (lower is better) Translates to: QTQDLCSHETSQSCD*ALVMIQPPLGSTFE Trigger: CTCAAATGTTGATCCCAGGGGTGGCTGTATCATCACTAAGGCCAAATCACAACTTTGACTGGTCTCATGGGAACACAGATCTTGGGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS TCA 72 bp | GAAGTCACTGTTGACCTCATTGGGGATGGTCTGACCTaGGCAGCTGAGTATTTTATTCAGGCCTACATTGCA | + |
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Preference number: 6 (lower is better) Translates to: EVTVDLIGDGLT*AAEYFIQAYIA Trigger: TGCAATGTAGGCCTGAATAAAATACTCAGCTGCTCAGGTCAGACCATCCCCAATGAGGTCAACAGTGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581862.6 |
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| CDS TCA 72 bp | ACTGTGAAGTCACTGTTGACCTCATTGGGGATGGTCTaGCCTGAGCAGCTGAGTATTTTATTCAGGCCTACA | + |
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Preference number: 6 (lower is better) Translates to: TVKSLLTSLGMV*PEQLSILFRPT Trigger: TGTAGGCCTGAATAAAATACTCAGCTGCTCAGGTCAGACCATCCCCAATGAGGTCAACAGTGACTTCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581862.6 |
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| CDS GCA 72 bp | AGAAAGGAGGTTTATTTGGCTCATAATTCCACAGGCTaGGTAAGAAGCATGGGTGTAGCATCCGCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RKEVYLAHNSTG*VRSMGVASASG Trigger: ACCAGAAGCGGATGCTACACCCATGCTTCTTACGCAGCCTGTGGAATTATGAGCCAAATAAACCTCCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654686.1 |
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| CDS CAA 72 bp | CTGTCTAGGCTGCTGGTTGCGAGACTGTCTTACTATTaGTGCATTATCCAAGAAGTACAGGGAGCAGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: LSRLLVARLSYY*CIIQEVQGAVV Trigger: TACCACTGCTCCCTGTACTTCTTGGATAATGCACAAATAGTAAGACAGTCTCGCAACCAGCAGCCTAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CAA 90 bp | GATGGAATGAAATGTTTAAAAGTTCTGCGTCTGGAAAGTTCAAGGTaGAGGGACTGGCATCTACTGATGGCCTTCTTACTGCGTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: DGMKCLKVLRLESSR*RDWHLLMAFLLRHP Trigger: GGGATGACGCAGTAAGAAGGCCATCAGTAGATGCCAGTCCCTCAACCTTGAACTTTCCAGACGCAGAACTTTTAAACATTTCATTCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582571.2 |
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| CDS TCA 72 bp | GAGTCGAGTAGAGTAGCTGCGACGAGACTACAAAGTTaGAACTATCTCCCAGCTGATCCTTTGCAGAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: ESSRVAATRLQS*NYLPADPLQKK Trigger: CTTTTTCTGCAAAGGATCAGCTGGGAGATAGTTTCAACTTTGTAGTCTCGTCGCAGCTACTCTACTCGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CCA 72 bp | AAGCCAATATCCATAGGATACAGGTACACATGTGATTaGATGTTTACTCCAGCAGCTGACACTCAGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KPISIGYRYTCD*MFTPAADTQWQ Trigger: CTGCCACTGAGTGTCAGCTGCTGGAGTAAACATCCAATCACATGTGTACCTGTATCCTATGGATATTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CAA 72 bp | TTCATTCTTACAGTTCTGCGTCTGGAAAGTTCAAGGTaGAGGGACTGGCATCTACTGATGGCCTTCTTACTG | + |
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Preference number: 6 (lower is better) Translates to: FILTVLRLESSR*RDWHLLMAFLL Trigger: CAGTAAGAAGGCCATCAGTAGATGCCAGTCCCTCAACCTTGAACTTTCCAGACGCAGAACTGTAAGAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000584671.1 ENST00000654686.1 |
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| CDS CAA 90 bp | ACAGGGAAATACCTCATTACTCAGCACTGCATCAAAAGGATGAGATaGACTCCAAGTGTTTTCCTCAAGGGCTTGGAGAGCAGCCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: TGKYLITQHCIKRMR*TPSVFLKGLESSQK Trigger: TTTTTGGCTGCTCTCCAAGCCCTTGAGGAAAACACTTGGAGTCAATCTCATCCTTTTGATGCAGTGCTGAGTAATGAGGTATTTCCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000584544.5 |
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| CDS CAA 90 bp | ATATTTGGGCTGTCTAGGCTGCTGGTTGCGAGACTGTCTTACTATTaGTGCATTATCCAAGAAGTACAGGGAGCAGTGGTACATTTACCT | + |
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Preference number: 6 (lower is better) Translates to: IFGLSRLLVARLSYY*CIIQEVQGAVVHLP Trigger: AGGTAAATGTACCACTGCTCCCTGTACTTCTTGGATAATGCACAAATAGTAAGACAGTCTCGCAACCAGCAGCCTAGACAGCCCAAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS GCA 72 bp | AGCTGTTTTGGTTTCACATATTTGGGCTGTCTAGGCTaGTGGTTGCGAGACTGTCTTACTATTTGTGCATTA | + |
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Preference number: 6 (lower is better) Translates to: SCFGFTYLGCLG*WLRDCLTICAL Trigger: TAATGCACAAATAGTAAGACAGTCTCGCAACCAGCAGCCTAGACAGCCCAAATATGTGAAACCAAAACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CCA 72 bp | GGGGTGTTGCATCCTCTACCATTTGCATGTGCAATCTaGACCAAGGTTAGAAAGCTAATTAAAATCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GVLHPLPFACAI*TKVRKLIKISP Trigger: AGGAGAGATTTTAATTAGCTTTCTAACCTTGGTCCAGATTGCACATGCAAATGGTAGAGGATGCAACACCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000581011.5 ENST00000581862.6 ENST00000583405.5 ENST00000584544.5 ENST00000661525.1 |
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| CDS CCA 72 bp | TGTTTTGGTTTCACATATTTGGGCTGTCTAGGCTGCTaGTTGCGAGACTGTCTTACTATTTGTGCATTATCC | + |
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Preference number: 6 (lower is better) Translates to: CFGFTYLGCLGC*LRDCLTICALS Trigger: GGATAATGCACAAATAGTAAGACAGTCTCGCAACCAGCAGCCTAGACAGCCCAAATATGTGAAACCAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CAA 72 bp | AGCTGGCACTTGTTGCAGAAATTGAGAAACAGCTCTTaGCAATCATCTGGAAATGCAAGAAACCCACAACAG | + |
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Preference number: 6 (lower is better) Translates to: SWHLLQKLRNSS*QSSGNARNPQQ Trigger: CTGTTGTGGGTTTCTTGCATTTCCAGATGATTGCAAAGAGCTGTTTCTCAATTTCTGCAACAAGTGCCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000581011.5 ENST00000581862.6 ENST00000584544.5 |
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| CDS CAA 72 bp | AAATGTTTAAAAGTTCTGCGTCTGGAAAGTTCAAGGTaGAGGGACTGGCATCTACTGATGGCCTTCTTACTG | + |
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Preference number: 6 (lower is better) Translates to: KCLKVLRLESSR*RDWHLLMAFLL Trigger: CAGTAAGAAGGCCATCAGTAGATGCCAGTCCCTCAACCTTGAACTTTCCAGACGCAGAACTTTTAAACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582571.2 |
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| CDS CAA 72 bp | TTTGGTTTCACATATTTGGGCTGTCTAGGCTGCTGGTaGCGAGACTGTCTTACTATTTGTGCATTATCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FGFTYLGCLGCW*RDCLTICALSK Trigger: CTTGGATAATGCACAAATAGTAAGACAGTCTCGCAACCAGCAGCCTAGACAGCCCAAATATGTGAAACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CAA 90 bp | GAATCGCAGGTAGTATGGGCTCCACAGAACTCACTCAGGCTCAAATaGTTCTACATATTTAATGAAACTGGTACCAAAATTTCAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ESQVVWAPQNSLRLK*FYIFNETGTKISAG Trigger: GCCAGCTGAAATTTTGGTACCAGTTTCATTAAATATGTAGAACAATTTGAGCCTGAGTGAGTTCTGTGGAGCCCATACTACCTGCGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581011.5 ENST00000584544.5 |
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| CDS TCA 72 bp | AACAGGCTGATAGGATCTTCAGTTTGCAGAGATAACTaGGAAACGTGTCTATCATTTAGGAGCCATTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: NRLIGSSVCRDN*ETCLSFRSHFS Trigger: GCTAAAATGGCTCCTAAATGATAGACACGTTTCTCAGTTATCTCTGCAAACTGAAGATCCTATCAGCCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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| CDS CAA 72 bp | TGGTACCAAAATTTCAGCTGGCACTTGTTGCAGAAATaGAGAAACAGCTCTTTGCAATCATCTGGAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: WYQNFSWHLLQK*RNSSLQSSGNA Trigger: TGCATTTCCAGATGATTGCAAAGAGCTGTTTCTCAATTTCTGCAACAAGTGCCAGCTGAAATTTTGGTACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000581011.5 ENST00000581862.6 ENST00000584544.5 |
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| CDS CCA 72 bp | TTTCCAACACTGGGGATCAAATTTCAACACGATGTTTaGAGGGGTCAAATATCCAAACAGTACCAAGATATT | + |
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Preference number: 6 (lower is better) Translates to: FPTLGIKFQHDV*RGQISKQYQDI Trigger: AATATCTTGGTACTGTTTGGATATTTGACCCCTCCAAACATCGTGTTGAAATTTGATCCCCAGTGTTGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654686.1 |
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| CDS CAA 72 bp | ATTTCCAACACTGGGGATCAAATTTCAACACGATGTTaGGAGGGGTCAAATATCCAAACAGTACCAAGATAT | + |
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Preference number: 6 (lower is better) Translates to: ISNTGDQISTRC*EGSNIQTVPRY Trigger: ATATCTTGGTACTGTTTGGATATTTGACCCCTCCAAACATCGTGTTGAAATTTGATCCCCAGTGTTGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654686.1 |
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| CDS TCA 72 bp | CAACAGCCAAAACAACCTGGCAAGAAAGAACAAAGGTaGAGGACATATACTACCCTGTTTCAAAACTTAATA | + |
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Preference number: 6 (lower is better) Translates to: QQPKQPGKKEQR*RTYTTLFQNLI Trigger: TATTAAGTTTTGAAACAGGGTAGTATATGTCCTTCACCTTTGTTCTTTCTTGCCAGGTTGTTTTGGCTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581862.6 |
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| CDS CAA 72 bp | GTAGTATGGGCTCCACAGAACTCACTCAGGCTCAAATaGTTCTACATATTTAATGAAACTGGTACCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: VVWAPQNSLRLK*FYIFNETGTKI Trigger: AATTTTGGTACCAGTTTCATTAAATATGTAGAACAATTTGAGCCTGAGTGAGTTCTGTGGAGCCCATACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000581011.5 ENST00000584544.5 |
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| CDS CAA 90 bp | AAAGATTCAAATATAGTCAGGAATGGAAAACAAAGGAACAACAAGTaGTATGAGGGGAAGCCAATATCCATAGGATACAGGTACACATGT | + |
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Preference number: 6 (lower is better) Translates to: KDSNIVRNGKQRNNK*YEGKPISIGYRYTC Trigger: ACATGTGTACCTGTATCCTATGGATATTGGCTTCCCCTCATACAACTTGTTGTTCCTTTGTTTTCCATTCCTGACTATATTTGAATCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581011.5 |
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