Pregenerated sensors for LINC02863 (Homo sapiens)
Ensembl gene IDs: ENSG00000238160Ensembl transcript IDs: ENST00000422204.1, ENST00000454380.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGGCACATGGCAGGTGGGGCCTTCTGCCACCCTGGCTGTGTGTGTaGCGTCCAGTGCGAGTGGTAGCCAGACATCATGCCCACCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LAHGRWGLLPPWLCV*RPVRVVARHHAHLP Trigger: GGGCAGGTGGGCATGATGTCTGGCTACCACTCGCACTGGACGCCACACACACAGCCAGGGTGGCAGAAGGCCCCACCTGCCATGTGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 90 bp | GGAAACGCAGACCATGAGGGTGGTGTCCCACTGGCACATGGCAGGTaGGGCCTTCTGCCACCCTGGCTGTGTGTGTGGCGTCCAGTGCGA | + |
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Preference number: 5 (lower is better) Translates to: GNADHEGGVPLAHGR*GLLPPWLCVWRPVR Trigger: TCGCACTGGACGCCACACACACAGCCAGGGTGGCAGAAGGCCCCACCTGCCATGTGCCAGTGGGACACCACCCTCATGGTCTGCGTTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 90 bp | AAACTGTTTGTGGCCCAGCAGGTGTTGGCACTGGGTGAGTGCTTCTaGCTCTTGTCCCACGACGGGCATCCAGGTCTTCCAGCGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: KLFVAQQVLALGECF*LLSHDGHPGLPAAS Trigger: GGAGGCCGCTGGAAGACCTGGATGCCCGTCGTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAACAGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS GCA 90 bp | CCAGTGCGAGTGGTAGCCAGACATCATGCCCACCTGCCCTCGAGCTaGTTGCCTGCAGCTGGCTCCTTACTCACAGATCTGCATCCATCC | + |
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Preference number: 5 (lower is better) Translates to: PVRVVARHHAHLPSS*LPAAGSLLTDLHPS Trigger: GGATGGATGCAGATCTGTGAGTAAGGAGCCAGCTGCAGGCAAGCAGCTCGAGGGCAGGTGGGCATGATGTCTGGCTACCACTCGCACTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS TCA 90 bp | TCCCAAGCAGAAACTGTTTGTGGCCCAGCAGGTGTTGGCACTGGGTaGGTGCTTCTGGCTCTTGTCCCACGACGGGCATCCAGGTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SQAETVCGPAGVGTG*VLLALVPRRASRSS Trigger: GGAAGACCTGGATGCCCGTCGTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAACAGTTTCTGCTTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS GCA 90 bp | AAGCAGAAACTGTTTGTGGCCCAGCAGGTGTTGGCACTGGGTGAGTaGTTCTGGCTCTTGTCCCACGACGGGCATCCAGGTCTTCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: KQKLFVAQQVLALGE*FWLLSHDGHPGLPA Trigger: CGCTGGAAGACCTGGATGCCCGTCGTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAACAGTTTCTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 90 bp | TTAGTTGGAAACCTGGAAACGCAGACCATGAGGGTGGTGTCCCACTaGCACATGGCAGGTGGGGCCTTCTGCCACCCTGGCTGTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: LVGNLETQTMRVVSH*HMAGGAFCHPGCVC Trigger: ACACACACAGCCAGGGTGGCAGAAGGCCCCACCTGCCATGTGCCAGTGGGACACCACCCTCATGGTCTGCGTTTCCAGGTTTCCAACTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 90 bp | TGTGTTGGGATCCCAAGCAGAAACTGTTTGTGGCCCAGCAGGTGTTaGCACTGGGTGAGTGCTTCTGGCTCTTGTCCCACGACGGGCATC | + |
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Preference number: 5 (lower is better) Translates to: CVGIPSRNCLWPSRC*HWVSASGSCPTTGI Trigger: GATGCCCGTCGTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAACAGTTTCTGCTTGGGATCCCAACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 90 bp | GCTGGCTCTGCCCTTGGTAGCCATTTTTATGGTCTGGAGGGACAGTaGCTTCTTCCTAGAGCCACTTTGCAGTGTTCCCTTGAGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: AGSALGSHFYGLEGQ*LLPRATLQCSLEAS Trigger: GCTGGCCTCAAGGGAACACTGCAAAGTGGCTCTAGGAAGAAGCCACTGTCCCTCCAGACCATAAAAATGGCTACCAAGGGCAGAGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000422204.1 ENST00000454380.1 |
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| CDS TCA 90 bp | TTGAGGCCAGCTGTCCATCCTCGAGAGCAGTTAGGAGGTCCATGTTaGGAGTGTGCTCAGTCCTTAGTTGGAAACCTGGAAACGCAGACC | + |
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Preference number: 5 (lower is better) Translates to: LRPAVHPREQLGGPC*ECAQSLVGNLETQT Trigger: GGTCTGCGTTTCCAGGTTTCCAACTAAGGACTGAGCACACTCTCAACATGGACCTCCTAACTGCTCTCGAGGATGGACAGCTGGCCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 90 bp | AGAGCAGTTAGGAGGTCCATGTTGAGAGTGTGCTCAGTCCTTAGTTaGAAACCTGGAAACGCAGACCATGAGGGTGGTGTCCCACTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RAVRRSMLRVCSVLS*KPGNADHEGGVPLA Trigger: TGCCAGTGGGACACCACCCTCATGGTCTGCGTTTCCAGGTTTCCAACTAAGGACTGAGCACACTCTCAACATGGACCTCCTAACTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS TCA 90 bp | GAGCATAGCACAGGGGAGATGTCCACACACAGTCATACCTGTGTTTaGATCCCAGCTCTGCCTTTTTGCTTGTGGGTGGTCGAGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: EHSTGEMSTHSHTCV*IPALPFCLWVVELG Trigger: TCCCAACTCGACCACCCACAAGCAAAAAGGCAGAGCTGGGATTCAAACACAGGTATGACTGTGTGTGGACATCTCCCCTGTGCTATGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS GCA 90 bp | AGCTGTCCATCCTCGAGAGCAGTTAGGAGGTCCATGTTGAGAGTGTaGTCAGTCCTTAGTTGGAAACCTGGAAACGCAGACCATGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: SCPSSRAVRRSMLRV*SVLSWKPGNADHEG Trigger: ACCCTCATGGTCTGCGTTTCCAGGTTTCCAACTAAGGACTGAGCACACTCTCAACATGGACCTCCTAACTGCTCTCGAGGATGGACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS GCA 90 bp | ATTTTTATGGTCTGGAGGGACAGTGGCTTCTTCCTAGAGCCACTTTaGAGTGTTCCCTTGAGGCCAGCTGTCCATCCTCGAGAGCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: IFMVWRDSGFFLEPL*SVPLRPAVHPREQL Trigger: TAACTGCTCTCGAGGATGGACAGCTGGCCTCAAGGGAACACTGCAAAGTGGCTCTAGGAAGAAGCCACTGTCCCTCCAGACCATAAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS TCA 90 bp | CAGCTCTGCCTTTTTGCTTGTGGGTGGTCGAGTTGGGAGTGTGCTTaGGAAATTATTCAGCCTCTTCAACTCTCAGTTTCTACCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: QLCLFACGWSSWECA*EIIQPLQLSVSTSP Trigger: AGGAGAGGTAGAAACTGAGAGTTGAAGAGGCTGAATAATTTCTCAAGCACACTCCCAACTCGACCACCCACAAGCAAAAAGGCAGAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS GCA 90 bp | ATCCCAGCTCTGCCTTTTTGCTTGTGGGTGGTCGAGTTGGGAGTGTaGTTGAGAAATTATTCAGCCTCTTCAACTCTCAGTTTCTACCTC | + |
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Preference number: 5 (lower is better) Translates to: IPALPFCLWVVELGV*LRNYSASSTLSFYL Trigger: GAGGTAGAAACTGAGAGTTGAAGAGGCTGAATAATTTCTCAAGCACACTCCCAACTCGACCACCCACAAGCAAAAAGGCAGAGCTGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS CCA 72 bp | GGCAGGTGGGGCCTTCTGCCACCCTGGCTGTGTGTGTaGCGTCCAGTGCGAGTGGTAGCCAGACATCATGCC | + |
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Preference number: 6 (lower is better) Translates to: GRWGLLPPWLCV*RPVRVVARHHA Trigger: GGCATGATGTCTGGCTACCACTCGCACTGGACGCCACACACACAGCCAGGGTGGCAGAAGGCCCCACCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 72 bp | CAGCAGGTGTTGGCACTGGGTGAGTGCTTCTGGCTCTaGTCCCACGACGGGCATCCAGGTCTTCCAGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: QQVLALGECFWL*SHDGHPGLPAA Trigger: GGCCGCTGGAAGACCTGGATGCCCGTCGTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 72 bp | TCATGCCCACCTGCCCTCGAGCTGCTTGCCTGCAGCTaGCTCCTTACTCACAGATCTGCATCCATCCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SCPPALELLACS*LLTHRSASIRR Trigger: GCGCCGGATGGATGCAGATCTGTGAGTAAGGAGCCAGCTGCAGGCAAGCAGCTCGAGGGCAGGTGGGCATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 90 bp | GTGCGAGTGGTAGCCAGACATCATGCCCACCTGCCCTCGAGCTGCTaGCCTGCAGCTGGCTCCTTACTCACAGATCTGCATCCATCCGGC | + |
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Preference number: 6 (lower is better) Translates to: VRVVARHHAHLPSSC*PAAGSLLTDLHPSG Trigger: GCCGGATGGATGCAGATCTGTGAGTAAGGAGCCAGCTGCAGGCAAGCAGCTCGAGGGCAGGTGGGCATGATGTCTGGCTACCACTCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 90 bp | TTTGTGGCCCAGCAGGTGTTGGCACTGGGTGAGTGCTTCTGGCTCTaGTCCCACGACGGGCATCCAGGTCTTCCAGCGGCCTCCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FVAQQVLALGECFWL*SHDGHPGLPAASFP Trigger: TGGAAAGGAGGCCGCTGGAAGACCTGGATGCCCGTCGTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS TCA 72 bp | GAAACTGTTTGTGGCCCAGCAGGTGTTGGCACTGGGTaGGTGCTTCTGGCTCTTGTCCCACGACGGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: ETVCGPAGVGTG*VLLALVPRRAS Trigger: GGATGCCCGTCGTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAACAGTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 90 bp | CTGTGTTGGGATCCCAAGCAGAAACTGTTTGTGGCCCAGCAGGTGTaGGCACTGGGTGAGTGCTTCTGGCTCTTGTCCCACGACGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LCWDPKQKLFVAQQV*ALGECFWLLSHDGH Trigger: ATGCCCGTCGTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAACAGTTTCTGCTTGGGATCCCAACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 72 bp | GGTCTGGAGGGACAGTGGCTTCTTCCTAGAGCCACTTaGCAGTGTTCCCTTGAGGCCAGCTGTCCATCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GLEGQWLLPRAT*QCSLEASCPSS Trigger: CGAGGATGGACAGCTGGCCTCAAGGGAACACTGCAAAGTGGCTCTAGGAAGAAGCCACTGTCCCTCCAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS GCA 72 bp | GTCTGGAGGGACAGTGGCTTCTTCCTAGAGCCACTTTaGAGTGTTCCCTTGAGGCCAGCTGTCCATCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: VWRDSGFFLEPL*SVPLRPAVHPR Trigger: TCGAGGATGGACAGCTGGCCTCAAGGGAACACTGCAAAGTGGCTCTAGGAAGAAGCCACTGTCCCTCCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 72 bp | ATCCCAAGCAGAAACTGTTTGTGGCCCAGCAGGTGTTaGCACTGGGTGAGTGCTTCTGGCTCTTGTCCCACG | + |
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Preference number: 6 (lower is better) Translates to: IPSRNCLWPSRC*HWVSASGSCPT Trigger: CGTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAACAGTTTCTGCTTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 72 bp | GCTGCCTGTGTTGGGATCCCAAGCAGAAACTGTTTGTaGCCCAGCAGGTGTTGGCACTGGGTGAGTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AACVGIPSRNCL*PSRCWHWVSAS Trigger: AGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAACAGTTTCTGCTTGGGATCCCAACACAGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 72 bp | GATCCCAAGCAGAAACTGTTTGTGGCCCAGCAGGTGTaGGCACTGGGTGAGTGCTTCTGGCTCTTGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: DPKQKLFVAQQV*ALGECFWLLSH Trigger: GTGGGACAAGAGCCAGAAGCACTCACCCAGTGCCAACACCTGCTGGGCCACAAACAGTTTCTGCTTGGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 90 bp | CTTGAGGCCAGCTGTCCATCCTCGAGAGCAGTTAGGAGGTCCATGTaGAGAGTGTGCTCAGTCCTTAGTTGGAAACCTGGAAACGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LEASCPSSRAVRRSM*RVCSVLSWKPGNAD Trigger: GTCTGCGTTTCCAGGTTTCCAACTAAGGACTGAGCACACTCTCAACATGGACCTCCTAACTGCTCTCGAGGATGGACAGCTGGCCTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CCA 72 bp | AGGAGGTCCATGTTGAGAGTGTGCTCAGTCCTTAGTTaGAAACCTGGAAACGCAGACCATGAGGGTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: RRSMLRVCSVLS*KPGNADHEGGV Trigger: GACACCACCCTCATGGTCTGCGTTTCCAGGTTTCCAACTAAGGACTGAGCACACTCTCAACATGGACCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 90 bp | CATTTTTATGGTCTGGAGGGACAGTGGCTTCTTCCTAGAGCCACTTaGCAGTGTTCCCTTGAGGCCAGCTGTCCATCCTCGAGAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: HFYGLEGQWLLPRAT*QCSLEASCPSSRAV Trigger: AACTGCTCTCGAGGATGGACAGCTGGCCTCAAGGGAACACTGCAAAGTGGCTCTAGGAAGAAGCCACTGTCCCTCCAGACCATAAAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS TCA 72 bp | ACAGGGGAGATGTCCACACACAGTCATACCTGTGTTTaGATCCCAGCTCTGCCTTTTTGCTTGTGGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TGEMSTHSHTCV*IPALPFCLWVV Trigger: GACCACCCACAAGCAAAAAGGCAGAGCTGGGATTCAAACACAGGTATGACTGTGTGTGGACATCTCCCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS GCA 72 bp | CCACACACAGTCATACCTGTGTTTGAATCCCAGCTCTaGCTTTTTGCTTGTGGGTGGTCGAGTTGGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PHTVIPVFESQL*LFACGWSSWEC Trigger: ACACTCCCAACTCGACCACCCACAAGCAAAAAGGCAGAGCTGGGATTCAAACACAGGTATGACTGTGTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS GCA 72 bp | TCCTCGAGAGCAGTTAGGAGGTCCATGTTGAGAGTGTaGTCAGTCCTTAGTTGGAAACCTGGAAACGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SSRAVRRSMLRV*SVLSWKPGNAD Trigger: GTCTGCGTTTCCAGGTTTCCAACTAAGGACTGAGCACACTCTCAACATGGACCTCCTAACTGCTCTCGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 72 bp | AGCTGTCCATCCTCGAGAGCAGTTAGGAGGTCCATGTaGAGAGTGTGCTCAGTCCTTAGTTGGAAACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SCPSSRAVRRSM*RVCSVLSWKPG Trigger: TCCAGGTTTCCAACTAAGGACTGAGCACACTCTCAACATGGACCTCCTAACTGCTCTCGAGGATGGACAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454380.1 |
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| CDS CAA 90 bp | CCAGCTCTGCCTTTTTGCTTGTGGGTGGTCGAGTTGGGAGTGTGCTaGAGAAATTATTCAGCCTCTTCAACTCTCAGTTTCTACCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PALPFCLWVVELGVC*RNYSASSTLSFYLS Trigger: GGAGAGGTAGAAACTGAGAGTTGAAGAGGCTGAATAATTTCTCAAGCACACTCCCAACTCGACCACCCACAAGCAAAAAGGCAGAGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS CAA 72 bp | ATCCCAGCTCTGCCTTTTTGCTTGTGGGTGGTCGAGTaGGGAGTGTGCTTGAGAAATTATTCAGCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: IPALPFCLWVVE*GVCLRNYSASS Trigger: TGAAGAGGCTGAATAATTTCTCAAGCACACTCCCAACTCGACCACCCACAAGCAAAAAGGCAGAGCTGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS CAA 90 bp | GTCCACACACAGTCATACCTGTGTTTGAATCCCAGCTCTGCCTTTTaGCTTGTGGGTGGTCGAGTTGGGAGTGTGCTTGAGAAATTATTC | + |
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Preference number: 6 (lower is better) Translates to: VHTQSYLCLNPSSAF*LVGGRVGSVLEKLF Trigger: GAATAATTTCTCAAGCACACTCCCAACTCGACCACCCACAAGCAAAAAGGCAGAGCTGGGATTCAAACACAGGTATGACTGTGTGTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS GCA 72 bp | CTGCCTTTTTGCTTGTGGGTGGTCGAGTTGGGAGTGTaGTTGAGAAATTATTCAGCCTCTTCAACTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LPFCLWVVELGV*LRNYSASSTLS Trigger: ACTGAGAGTTGAAGAGGCTGAATAATTTCTCAAGCACACTCCCAACTCGACCACCCACAAGCAAAAAGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS CAA 72 bp | CCTTTTTGCTTGTGGGTGGTCGAGTTGGGAGTGTGCTaGAGAAATTATTCAGCCTCTTCAACTCTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PFCLWVVELGVC*RNYSASSTLSF Trigger: GAAACTGAGAGTTGAAGAGGCTGAATAATTTCTCAAGCACACTCCCAACTCGACCACCCACAAGCAAAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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| CDS TCA 72 bp | CTTTTTGCTTGTGGGTGGTCGAGTTGGGAGTGTGCTTaGGAAATTATTCAGCCTCTTCAACTCTCAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LFACGWSSWECA*EIIQPLQLSVS Trigger: AGAAACTGAGAGTTGAAGAGGCTGAATAATTTCTCAAGCACACTCCCAACTCGACCACCCACAAGCAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422204.1 |
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