Pregenerated sensors for LINC02861 (Homo sapiens)
Ensembl gene IDs: ENSG00000262185Ensembl transcript IDs: ENST00000571302.2, ENST00000576810.1, ENST00000649221.1, ENST00000657721.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGGTTGGCCTATGCCAGGCAGGCGCGAGGTCTCTATTCCCCATGTaGCAATCAAGCTGGGTGCGTTCACGCCCAGGATGCTGGGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: WVGLCQAGARSLFPM*QSSWVRSRPGCWGC Trigger: ACAACCCCAGCATCCTGGGCGTGAACGCACCCAGCTTGATTGTCACATGGGGAATAGAGACCTCGCGCCTGCCTGGCATAGGCCAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000649221.1 ENST00000657721.1 |
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| CDS GCA 90 bp | AGGCAGGCGCGAGGTCTCTATTCCCCATGTGACAATCAAGCTGGGTaGGTTCACGCCCAGGATGCTGGGGTTGTCCCACCTCTAGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: RQARGLYSPCDNQAG*VHAQDAGVVPPLGL Trigger: CAAACCTAGAGGTGGGACAACCCCAGCATCCTGGGCGTGAACGCACCCAGCTTGATTGTCACATGGGGAATAGAGACCTCGCGCCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000649221.1 ENST00000657721.1 |
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| CDS TCA 90 bp | GAGGAGAAGCAATTTGTTCAGGAGCAGAGAAAGTTCGCTTGGCTGTaGCTCATCGCCTCTCCATTGAGAGTCTCCGGCGGGTCCGTGATC | + |
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Preference number: 5 (lower is better) Translates to: EEKQFVQEQRKFAWL*LIASPLRVSGGSVI Trigger: GATCACGGACCCGCCGGAGACTCTCAATGGAGAGGCGATGAGTCACAGCCAAGCGAACTTTCTCTGCTCCTGAACAAATTGCTTCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649221.1 |
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| CDS CCA 90 bp | GTTCACGCCCAGGATGCTGGGGTTGTCCCACCTCTAGGTTTGGAGTaGGACGACGAGGAGAAGCAATTTGTTCAGGAGCAGAGAAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: VHAQDAGVVPPLGLE*DDEEKQFVQEQRKF Trigger: GAACTTTCTCTGCTCCTGAACAAATTGCTTCTCCTCGTCGTCCCACTCCAAACCTAGAGGTGGGACAACCCCAGCATCCTGGGCGTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649221.1 ENST00000657721.1 |
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| CDS TCA 90 bp | GTCACCTCTCATTGTGGAAGAAGGACTAGTAAAGCCAGCTTTAAATaGACATTACTGGGTTGGCCTATGCCAGGCAGGCGCGAGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VTSHCGRRTSKASFK*TLLGWPMPGRREVS Trigger: AGAGACCTCGCGCCTGCCTGGCATAGGCCAACCCAGTAATGTTCATTTAAAGCTGGCTTTACTAGTCCTTCTTCCACAATGAGAGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000576810.1 ENST00000649221.1 ENST00000657721.1 |
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| CDS GCA 90 bp | TCCAAACCTATCATGAGATACGCCAGCACTGACAAGAATCCTCACTaGGGCATTGTTCATCGCGCCCCAAACTGGAAACAGCTCAATCGA | + |
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Preference number: 5 (lower is better) Translates to: SKPIMRYASTDKNPH*GIVHRAPNWKQLNR Trigger: TCGATTGAGCTGTTTCCAGTTTGGGGCGCGATGAACAATGCCGCAGTGAGGATTCTTGTCAGTGCTGGCGTATCTCATGATAGGTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576810.1 ENST00000657721.1 |
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| CDS CCA 90 bp | ATTGTGGAAGAAGGACTAGTAAAGCCAGCTTTAAATGAACATTACTaGGTTGGCCTATGCCAGGCAGGCGCGAGGTCTCTATTCCCCATG | + |
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Preference number: 5 (lower is better) Translates to: IVEEGLVKPALNEHY*VGLCQAGARSLFPM Trigger: CATGGGGAATAGAGACCTCGCGCCTGCCTGGCATAGGCCAACCCAGTAATGTTCATTTAAAGCTGGCTTTACTAGTCCTTCTTCCACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000576810.1 ENST00000649221.1 ENST00000657721.1 |
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| CDS GCA 90 bp | CTGCTCTTGAAAGGGTCCAAATGGCACATCTATCTTGTCAGGTCATaGACATCTGCGTTAGGCAAATCTGGAAGATTCTTCAAAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LLLKGSKWHIYLVRS*TSALGKSGRFFKVF Trigger: GAAAACTTTGAAGAATCTTCCAGATTTGCCTAACGCAGATGTGCATGACCTGACAAGATAGATGTGCCATTTGGACCCTTTCAAGAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571302.2 ENST00000649221.1 |
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| CDS CCA 90 bp | TTGCTACACCTCAGCTTTTGCAAACAAATGCTGCAAAGAAGAACCTaGTGCATGAGACATTTTGCATGTTCGGGCAGATCTGTAGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: LLHLSFCKQMLQRRT*CMRHFACSGRSVEV Trigger: TACTTCTACAGATCTGCCCGAACATGCAAAATGTCTCATGCACCAGGTTCTTCTTTGCAGCATTTGTTTGCAAAAGCTGAGGTGTAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000576810.1 ENST00000657721.1 |
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| CDS CCA 90 bp | GCACATCTATCTTGTCAGGTCATGCACATCTGCGTTAGGCAAATCTaGAAGATTCTTCAAAGTTTTCCTGTTTCTCCCTTTCTTCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: AHLSCQVMHICVRQI*KILQSFPVSPFLPS Trigger: GGAAGGAAGAAAGGGAGAAACAGGAAAACTTTGAAGAATCTTCCAGATTTGCCTAACGCAGATGTGCATGACCTGACAAGATAGATGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649221.1 |
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| CDS GCA 90 bp | GAAAGGGTCCAAATGGCACATCTATCTTGTCAGGTCATGCACATCTaGGTTAGGCAAATCTGGAAGATTCTTCAAAGTTTTCCTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: ERVQMAHLSCQVMHI*VRQIWKILQSFPVS Trigger: AGAAACAGGAAAACTTTGAAGAATCTTCCAGATTTGCCTAACGCAGATGTGCATGACCTGACAAGATAGATGTGCCATTTGGACCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571302.2 ENST00000649221.1 |
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| CDS CCA 90 bp | AGGTCCTGCTGGTACCGAGCTTTCTCATTCCTTCTGGTGGCTGCCTaGTATTCTAGTCTATGGATGGATAAATATTTATTGATGGATATT | + |
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Preference number: 5 (lower is better) Translates to: RSCWYRAFSFLLVAA*YSSLWMDKYLLMDI Trigger: AATATCCATCAATAAATATTTATCCATCCATAGACTAGAATACCAGGCAGCCACCAGAAGGAATGAGAAAGCTCGGTACCAGCAGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576810.1 ENST00000657721.1 |
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| CDS TCA 72 bp | CTATGCCAGGCAGGCGCGAGGTCTCTATTCCCCATGTaGCAATCAAGCTGGGTGCGTTCACGCCCAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: LCQAGARSLFPM*QSSWVRSRPGC Trigger: GCATCCTGGGCGTGAACGCACCCAGCTTGATTGTCACATGGGGAATAGAGACCTCGCGCCTGCCTGGCATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000576810.1 ENST00000649221.1 ENST00000657721.1 |
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| CDS CAA 90 bp | GGGTGCGTTCACGCCCAGGATGCTGGGGTTGTCCCACCTCTAGGTTaGGAGTGGGACGACGAGGAGAAGCAATTTGTTCAGGAGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GCVHAQDAGVVPPLG*EWDDEEKQFVQEQR Trigger: TCTCTGCTCCTGAACAAATTGCTTCTCCTCGTCGTCCCACTCCAAACCTAGAGGTGGGACAACCCCAGCATCCTGGGCGTGAACGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649221.1 ENST00000657721.1 |
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| CDS GCA 72 bp | CGAGGTCTCTATTCCCCATGTGACAATCAAGCTGGGTaGGTTCACGCCCAGGATGCTGGGGTTGTCCCACCT | + |
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Preference number: 6 (lower is better) Translates to: RGLYSPCDNQAG*VHAQDAGVVPP Trigger: AGGTGGGACAACCCCAGCATCCTGGGCGTGAACGCACCCAGCTTGATTGTCACATGGGGAATAGAGACCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000649221.1 ENST00000657721.1 |
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| CDS CAA 72 bp | CACGCCCAGGATGCTGGGGTTGTCCCACCTCTAGGTTaGGAGTGGGACGACGAGGAGAAGCAATTTGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HAQDAGVVPPLG*EWDDEEKQFVQ Trigger: CTGAACAAATTGCTTCTCCTCGTCGTCCCACTCCAAACCTAGAGGTGGGACAACCCCAGCATCCTGGGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649221.1 ENST00000657721.1 |
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| CDS CAA 90 bp | GGACGACGAGGAGAAGCAATTTGTTCAGGAGCAGAGAAAGTTCGCTaGGCTGTGACTCATCGCCTCTCCATTGAGAGTCTCCGGCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GRRGEAICSGAEKVR*AVTHRLSIESLRRV Trigger: GACCCGCCGGAGACTCTCAATGGAGAGGCGATGAGTCACAGCCAAGCGAACTTTCTCTGCTCCTGAACAAATTGCTTCTCCTCGTCGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649221.1 |
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| CDS CCA 72 bp | CAGGATGCTGGGGTTGTCCCACCTCTAGGTTTGGAGTaGGACGACGAGGAGAAGCAATTTGTTCAGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QDAGVVPPLGLE*DDEEKQFVQEQ Trigger: CTGCTCCTGAACAAATTGCTTCTCCTCGTCGTCCCACTCCAAACCTAGAGGTGGGACAACCCCAGCATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000649221.1 ENST00000657721.1 |
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| CDS TCA 72 bp | CAATTTGTTCAGGAGCAGAGAAAGTTCGCTTGGCTGTaGCTCATCGCCTCTCCATTGAGAGTCTCCGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: QFVQEQRKFAWL*LIASPLRVSGG Trigger: CCCGCCGGAGACTCTCAATGGAGAGGCGATGAGTCACAGCCAAGCGAACTTTCTCTGCTCCTGAACAAATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649221.1 |
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| CDS CAA 90 bp | TCCACCAGCACCAGCCAGGGTTCTCTGAAAAAGGCGCTGAATATTTaGCTCAGCTCTGTGCTTCTGTGCTCGAGCCAACCACACGTATAC | + |
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Preference number: 6 (lower is better) Translates to: STSTSQGSLKKALNI*LSSVLLCSSQPHVY Trigger: GTATACGTGTGGTTGGCTCGAGCACAGAAGCACAGAGCTGAGCAAAATATTCAGCGCCTTTTTCAGAGAACCCTGGCTGGTGCTGGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571302.2 |
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| CDS GCA 72 bp | ATCATGAGATACGCCAGCACTGACAAGAATCCTCACTaGGGCATTGTTCATCGCGCCCCAAACTGGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: IMRYASTDKNPH*GIVHRAPNWKQ Trigger: CTGTTTCCAGTTTGGGGCGCGATGAACAATGCCGCAGTGAGGATTCTTGTCAGTGCTGGCGTATCTCATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576810.1 ENST00000657721.1 |
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| CDS CCA 72 bp | CTTAAGCGATTCTCCGGCATTAGCTTCCCAAAATGTTaGAATTACATGTGTGAGCCTCCACGCTGGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LKRFSGISFPKC*NYMCEPPRWAP Trigger: TGGGGCCCAGCGTGGAGGCTCACACATGTAATTCCAACATTTTGGGAAGCTAATGCCGGAGAATCGCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000576810.1 |
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| CDS CAA 72 bp | GGAGAAGCAATTTGTTCAGGAGCAGAGAAAGTTCGCTaGGCTGTGACTCATCGCCTCTCCATTGAGAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GEAICSGAEKVR*AVTHRLSIESL Trigger: GAGACTCTCAATGGAGAGGCGATGAGTCACAGCCAAGCGAACTTTCTCTGCTCCTGAACAAATTGCTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649221.1 |
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| CDS CAA 90 bp | AGATCACACCATTGCACTCCAGCCTCCCTTCCATTCTGTCTGCTCTaGAAAGGGTCCAAATGGCACATCTATCTTGTCAGGTCATGCACA | + |
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Preference number: 6 (lower is better) Translates to: RSHHCTPASLPFCLL*KGSKWHIYLVRSCT Trigger: TGTGCATGACCTGACAAGATAGATGTGCCATTTGGACCCTTTCAAGAGCAGACAGAATGGAAGGGAGGCTGGAGTGCAATGGTGTGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571302.2 ENST00000649221.1 |
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| CDS TCA 72 bp | CATTGTGGAAGAAGGACTAGTAAAGCCAGCTTTAAATaGACATTACTGGGTTGGCCTATGCCAGGCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: HCGRRTSKASFK*TLLGWPMPGRR Trigger: GCGCCTGCCTGGCATAGGCCAACCCAGTAATGTTCATTTAAAGCTGGCTTTACTAGTCCTTCTTCCACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000576810.1 ENST00000649221.1 ENST00000657721.1 |
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| CDS GCA 72 bp | AAGGCGCTGAATATTTTGCTCAGCTCTGTGCTTCTGTaGTCGAGCCAACCACACGTATACTTGAACACGAAG | + |
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Preference number: 6 (lower is better) Translates to: KALNILLSSVLL*SSQPHVYLNTK Trigger: CTTCGTGTTCAAGTATACGTGTGGTTGGCTCGAGCACAGAAGCACAGAGCTGAGCAAAATATTCAGCGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571302.2 |
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| CDS CCA 72 bp | GGTCCTGCTGGTACCGAGCTTTCTCATTCCTTCTGGTaGCTGCCTGGTATTCTAGTCTATGGATGGATAAAT | + |
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Preference number: 6 (lower is better) Translates to: GPAGTELSHSFW*LPGILVYGWIN Trigger: ATTTATCCATCCATAGACTAGAATACCAGGCAGCCACCAGAAGGAATGAGAAAGCTCGGTACCAGCAGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576810.1 ENST00000657721.1 |
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| CDS CCA 72 bp | TCCCTTCCATTCTGTCTGCTCTTGAAAGGGTCCAAATaGCACATCTATCTTGTCAGGTCATGCACATCTGCG | + |
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Preference number: 6 (lower is better) Translates to: SLPFCLLLKGSK*HIYLVRSCTSA Trigger: CGCAGATGTGCATGACCTGACAAGATAGATGTGCCATTTGGACCCTTTCAAGAGCAGACAGAATGGAAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571302.2 ENST00000649221.1 |
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| CDS TCA 72 bp | ATTTATTTCCAAACCTATCATGAGATACGCCAGCACTaGCAAGAATCCTCACTGCGGCATTGTTCATCGCGC | + |
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Preference number: 6 (lower is better) Translates to: IYFQTYHEIRQH*QESSLRHCSSR Trigger: GCGCGATGAACAATGCCGCAGTGAGGATTCTTGTCAGTGCTGGCGTATCTCATGATAGGTTTGGAAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576810.1 ENST00000657721.1 |
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| CDS GCA 72 bp | AATGCTGCAAAGAAGAACCTGGTGCATGAGACATTTTaGATGTTCGGGCAGATCTGTAGAAGTAATTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: NAAKKNLVHETF*MFGQICRSNSQ Trigger: CTGGGAATTACTTCTACAGATCTGCCCGAACATGCAAAATGTCTCATGCACCAGGTTCTTCTTTGCAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000576810.1 ENST00000657721.1 |
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| CDS GCA 72 bp | AAAGGGTCCAAATGGCACATCTATCTTGTCAGGTCATaGACATCTGCGTTAGGCAAATCTGGAAGATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KGSKWHIYLVRS*TSALGKSGRFF Trigger: GAAGAATCTTCCAGATTTGCCTAACGCAGATGTGCATGACCTGACAAGATAGATGTGCCATTTGGACCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571302.2 ENST00000649221.1 |
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| CDS CCA 72 bp | TGGTACCGAGCTTTCTCATTCCTTCTGGTGGCTGCCTaGTATTCTAGTCTATGGATGGATAAATATTTATTG | + |
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Preference number: 6 (lower is better) Translates to: WYRAFSFLLVAA*YSSLWMDKYLL Trigger: CAATAAATATTTATCCATCCATAGACTAGAATACCAGGCAGCCACCAGAAGGAATGAGAAAGCTCGGTACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000576810.1 ENST00000657721.1 |
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| CDS CCA 72 bp | TCTTGTCAGGTCATGCACATCTGCGTTAGGCAAATCTaGAAGATTCTTCAAAGTTTTCCTGTTTCTCCCTTA | + |
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Preference number: 6 (lower is better) Translates to: SCQVMHICVRQI*KILQSFPVSPL Trigger: TAAGGGAGAAACAGGAAAACTTTGAAGAATCTTCCAGATTTGCCTAACGCAGATGTGCATGACCTGACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571302.2 |
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| CDS CCA 72 bp | TCTTGTCAGGTCATGCACATCTGCGTTAGGCAAATCTaGAAGATTCTTCAAAGTTTTCCTGTTTCTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SCQVMHICVRQI*KILQSFPVSPF Trigger: AAAGGGAGAAACAGGAAAACTTTGAAGAATCTTCCAGATTTGCCTAACGCAGATGTGCATGACCTGACAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649221.1 |
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| CDS GCA 72 bp | CAAATGGCACATCTATCTTGTCAGGTCATGCACATCTaGGTTAGGCAAATCTGGAAGATTCTTCAAAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: QMAHLSCQVMHI*VRQIWKILQSF Trigger: AAAACTTTGAAGAATCTTCCAGATTTGCCTAACGCAGATGTGCATGACCTGACAAGATAGATGTGCCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571302.2 ENST00000649221.1 |
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