Pregenerated sensors for LINC02860 (Homo sapiens)
Ensembl gene IDs: ENSG00000222004Ensembl transcript IDs: ENST00000409974.7, ENST00000614528.3
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GACCTGGGGCAGGGCAATTCCGGAGCAGAGGGCTCTGACTCCCTGTaGAGGAAGGACCCTGGCTGGAGGATCCCCACCTATGCTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: DLGQGNSGAEGSDSL*RKDPGWRIPTYAPR Trigger: CCTTGGAGCATAGGTGGGGATCCTCCAGCCAGGGTCCTTCCTTCACAGGGAGTCAGAGCCCTCTGCTCCGGAATTGCCCTGCCCCAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 90 bp | ATAGATGGCCGACCTGGGGCAGGGCAATTCCGGAGCAGAGGGCTCTaGCTCCCTGTGAAGGAAGGACCCTGGCTGGAGGATCCCCACCTA | + |
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Preference number: 5 (lower is better) Translates to: IDGRPGAGQFRSRGL*LPVKEGPWLEDPHL Trigger: TAGGTGGGGATCCTCCAGCCAGGGTCCTTCCTTCACAGGGAGTCAGAGCCCTCTGCTCCGGAATTGCCCTGCCCCAGGTCGGCCATCTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 90 bp | CTGGAGGATCCCCACCTATGCTCCAAGGTGGTAGCCCTGGGCCTATaGGGGGACCATCACGATGTGGGAATGGGATGCAGGGAGTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LEDPHLCSKVVALGL*GDHHDVGMGCREWS Trigger: GCTCCACTCCCTGCATCCCATTCCCACATCGTGATGGTCCCCTCATAGGCCCAGGGCTACCACCTTGGAGCATAGGTGGGGATCCTCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CCA 90 bp | GATTCTATACACTTTCTTCATGGTCTCTCAGCCAGCGGCAGCTTCTaGGCCCACCTTGCTTCACTCCCCATCCATACCCAGCAGGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: DSIHFLHGLSASGSF*AHLASLPIHTQQGL Trigger: AAGCCCCTGCTGGGTATGGATGGGGAGTGAAGCAAGGTGGGCCCAGAAGCTGCCGCTGGCTGAGAGACCATGAAGAAAGTGTATAGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS GCA 90 bp | AGCAATTCAGCCCATAGCAGCCCTGAGAGAGGTAACACACTAGACTaGTTCGGGGTCACAGGAATGACATTTGCGGCTCCCTTGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: SNSAHSSPERGNTLD*FGVTGMTFAAPLLH Trigger: GTGCAGCAAGGGAGCCGCAAATGTCATTCCTGTGACCCCGAAGCAGTCTAGTGTGTTACCTCTCTCAGGGCTGCTATGGGCTGAATTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS GCA 90 bp | CCAAGAACCAATGTAAAGAGACAGGGAATGGGGCTTAGATTGCCCTaGTGGTCTATTCTATCCACTGTTCTTTTCTCGTCCACCCTAATG | + |
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Preference number: 5 (lower is better) Translates to: PRTNVKRQGMGLRLP*WSILSTVLFSSTLM Trigger: CATTAGGGTGGACGAGAAAAGAACAGTGGATAGAATAGACCAGCAGGGCAATCTAAGCCCCATTCCCTGTCTCTTTACATTGGTTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CCA 90 bp | TGTCTCTGTGTCCTCATGTGTCTTGTCTCTGAGTGTGCACATCTCTaGTGTCTCTTCCTCTTCTTAAAAGGACACCAGTCAGATTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: CLCVLMCLVSECAHL*CLFLFLKGHQSDWV Trigger: AACCCAATCTGACTGGTGTCCTTTTAAGAAGAGGAAGAGACACCAGAGATGTGCACACTCAGAGACAAGACACATGAGGACACAGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 90 bp | ATTTCCAGCTTTCGCATTCCAGATAGGAATATAAGGGAGTTTGGATaGGTCACGGGGACCAAGAACCAATGTAAAGAGACAGGGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: ISSFRIPDRNIREFG*VTGTKNQCKETGNG Trigger: CCCATTCCCTGTCTCTTTACATTGGTTCTTGGTCCCCGTGACTCATCCAAACTCCCTTATATTCCTATCTGGAATGCGAAAGCTGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS GCA 90 bp | GGATTCCAGCCTGGTATAGACTGTGAAGCTCCACAGCATGGTGAATaGTTTCTTCAAGGTGTTTTTAATGGGCCCTGGATTGTCAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: GFQPGIDCEAPQHGE*FLQGVFNGPWIVKD Trigger: ATCTTTGACAATCCAGGGCCCATTAAAAACACCTTGAAGAAAGCATTCACCATGCTGTGGAGCTTCACAGTCTATACCAGGCTGGAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CCA 90 bp | GTCCACCCTAATGAATTCCTGGGTGAGCCAGAAACCTTTGAAAAATaGCTATCAGCTACAAATGGGAGGTCTGATGCTCTGAAAACAAAG | + |
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Preference number: 5 (lower is better) Translates to: VHPNEFLGEPETFEK*LSATNGRSDALKTK Trigger: CTTTGTTTTCAGAGCATCAGACCTCCCATTTGTAGCTGATAGCCATTTTTCAAAGGTTTCTGGCTCACCCAGGAATTCATTAGGGTGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CCA 90 bp | AGAACCAATGTAAAGAGACAGGGAATGGGGCTTAGATTGCCCTGCTaGTCTATTCTATCCACTGTTCTTTTCTCGTCCACCCTAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: RTNVKRQGMGLRLPC*SILSTVLFSSTLMN Trigger: ATTCATTAGGGTGGACGAGAAAAGAACAGTGGATAGAATAGACCAGCAGGGCAATCTAAGCCCCATTCCCTGTCTCTTTACATTGGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CCA 90 bp | TCTATTCTATCCACTGTTCTTTTCTCGTCCACCCTAATGAATTCCTaGGTGAGCCAGAAACCTTTGAAAAATGGCTATCAGCTACAAATG | + |
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Preference number: 5 (lower is better) Translates to: SILSTVLFSSTLMNS*VSQKPLKNGYQLQM Trigger: CATTTGTAGCTGATAGCCATTTTTCAAAGGTTTCTGGCTCACCCAGGAATTCATTAGGGTGGACGAGAAAAGAACAGTGGATAGAATAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 90 bp | AAAGCTCTTTTCATCATAGGAATAATTGAACTGTATCCTAGCTCATaGTTTATACCCATTTCACTCAGATTCTGGAGTTCTGGAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: KALFIIGIIELYPSS*FIPISLRFWSSGGW Trigger: CCAGCCTCCAGAACTCCAGAATCTGAGTGAAATGGGTATAAATCATGAGCTAGGATACAGTTCAATTATTCCTATGATGAAAAGAGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 72 bp | CGACCTGGGGCAGGGCAATTCCGGAGCAGAGGGCTCTaGCTCCCTGTGAAGGAAGGACCCTGGCTGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: RPGAGQFRSRGL*LPVKEGPWLED Trigger: ATCCTCCAGCCAGGGTCCTTCCTTCACAGGGAGTCAGAGCCCTCTGCTCCGGAATTGCCCTGCCCCAGGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CCA 72 bp | GAGGCTGGAAGTCCAAGATCAAGGCGTAGGCAGGGTTaGCTTCCCCGAGGCCCCTCTCCCTGGCTTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: EAGSPRSRRRQG*LPRGPSPWLAG Trigger: ACCTGCAAGCCAGGGAGAGGGGCCTCGGGGAAGCCAACCCTGCCTACGCCTTGATCTTGGACTTCCAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CAA 90 bp | CAAGGCGTAGGCAGGGTTGGCTTCCCCGAGGCCCCTCTCCCTGGCTaGCAGGTAGCCGCCTTGTCTCTGTGTCCTCATGTGTCTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: QGVGRVGFPEAPLPG*QVAALSLCPHVSCL Trigger: GAGACAAGACACATGAGGACACAGAGACAAGGCGGCTACCTGCAAGCCAGGGAGAGGGGCCTCGGGGAAGCCAACCCTGCCTACGCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 72 bp | CCCCACCTATGCTCCAAGGTGGTAGCCCTGGGCCTATaGGGGGACCATCACGATGTGGGAATGGGATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PHLCSKVVALGL*GDHHDVGMGCR Trigger: CCTGCATCCCATTCCCACATCGTGATGGTCCCCTCATAGGCCCAGGGCTACCACCTTGGAGCATAGGTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 72 bp | CAGGGCAATTCCGGAGCAGAGGGCTCTGACTCCCTGTaGAGGAAGGACCCTGGCTGGAGGATCCCCACCTAT | + |
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Preference number: 6 (lower is better) Translates to: QGNSGAEGSDSL*RKDPGWRIPTY Trigger: ATAGGTGGGGATCCTCCAGCCAGGGTCCTTCCTTCACAGGGAGTCAGAGCCCTCTGCTCCGGAATTGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CCA 72 bp | CACTTTCTTCATGGTCTCTCAGCCAGCGGCAGCTTCTaGGCCCACCTTGCTTCACTCCCCATCCATACCCAG | + |
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Preference number: 6 (lower is better) Translates to: HFLHGLSASGSF*AHLASLPIHTQ Trigger: CTGGGTATGGATGGGGAGTGAAGCAAGGTGGGCCCAGAAGCTGCCGCTGGCTGAGAGACCATGAAGAAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CCA 72 bp | GACATCCGCGGCTGTCGTGGTGATGCAGAACTTGCTTaGGTTTCACAGAAGCATCGGGGTGCTTATAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: DIRGCRGDAELA*VSQKHRGAYRA Trigger: GGCCCTATAAGCACCCCGATGCTTCTGTGAAACCCAAGCAAGTTCTGCATCACCACGACAGCCGCGGATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CAA 72 bp | GATTTGACATCCGCGGCTGTCGTGGTGATGCAGAACTaGCTTGGGTTTCACAGAAGCATCGGGGTGCTTATA | + |
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Preference number: 6 (lower is better) Translates to: DLTSAAVVVMQN*LGFHRSIGVLI Trigger: TATAAGCACCCCGATGCTTCTGTGAAACCCAAGCAAGTTCTGCATCACCACGACAGCCGCGGATGTCAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CAA 90 bp | TGTTTTGATGATTTGACATCCGCGGCTGTCGTGGTGATGCAGAACTaGCTTGGGTTTCACAGAAGCATCGGGGTGCTTATAGGGCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: CFDDLTSAAVVVMQN*LGFHRSIGVLIGPD Trigger: ATCTGGCCCTATAAGCACCCCGATGCTTCTGTGAAACCCAAGCAAGTTCTGCATCACCACGACAGCCGCGGATGTCAAATCATCAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 72 bp | CGGTTCTCACACTGCTATAAGGACATACCTCAACAATaGGGTCAGCGGGATAGAGCAGAAATTGCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RFSHCYKDIPQQ*GQRDRAEIALG Trigger: GCCCAGTGCAATTTCTGCTCTATCCCGCTGACCTCATTGTTGAGGTATGTCCTTATAGCAGTGTGAGAACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409974.7 |
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| CDS CAA 72 bp | GGAATAAACCCCTTCCTCTGCTGCTGTTTTGATGATTaGACATCCGCGGCTGTCGTGGTGATGCAGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: GINPFLCCCFDD*TSAAVVVMQNL Trigger: CAAGTTCTGCATCACCACGACAGCCGCGGATGTCAAATCATCAAAACAGCAGCAGAGGAAGGGGTTTATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CAA 90 bp | TTTGGAGGAGGAATAAACCCCTTCCTCTGCTGCTGTTTTGATGATTaGACATCCGCGGCTGTCGTGGTGATGCAGAACTTGCTTGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: FGGGINPFLCCCFDD*TSAAVVVMQNLLGF Trigger: AAACCCAAGCAAGTTCTGCATCACCACGACAGCCGCGGATGTCAAATCATCAAAACAGCAGCAGAGGAAGGGGTTTATTCCTCCTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CCA 72 bp | GTAAAGAGACAGGGAATGGGGCTTAGATTGCCCTGCTaGTCTATTCTATCCACTGTTCTTTTCTCGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: VKRQGMGLRLPC*SILSTVLFSST Trigger: GGTGGACGAGAAAAGAACAGTGGATAGAATAGACCAGCAGGGCAATCTAAGCCCCATTCCCTGTCTCTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS GCA 72 bp | CACCAGAGACAAACCCGACTAACTACCCTTCAGTTTTaGCCAAGACGCTGTTCACTTCAACTCATCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: HQRQTRLTTLQF*PRRCSLQLIHS Trigger: TGAATGGATGAGTTGAAGTGAACAGCGTCTTGGGCAAAACTGAAGGGTAGTTAGTCGGGTTTGTCTCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS GCA 72 bp | AATGTAAAGAGACAGGGAATGGGGCTTAGATTGCCCTaGTGGTCTATTCTATCCACTGTTCTTTTCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: NVKRQGMGLRLP*WSILSTVLFSS Trigger: GGACGAGAAAAGAACAGTGGATAGAATAGACCAGCAGGGCAATCTAAGCCCCATTCCCTGTCTCTTTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CAA 72 bp | AATGCTTTCTTCAAGGTGTTTTTAATGGGCCCTGGATaGTCAAAGATGCCACTCATAATGAGGCCGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: NAFFKVFLMGPG*SKMPLIMRPRV Trigger: GACTCTCGGCCTCATTATGAGTGGCATCTTTGACAATCCAGGGCCCATTAAAAACACCTTGAAGAAAGCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CAA 72 bp | AGAACCAATGTAAAGAGACAGGGAATGGGGCTTAGATaGCCCTGCTGGTCTATTCTATCCACTGTTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: RTNVKRQGMGLR*PCWSILSTVLF Trigger: GAAAAGAACAGTGGATAGAATAGACCAGCAGGGCAATCTAAGCCCCATTCCCTGTCTCTTTACATTGGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 72 bp | TTTCGCATTCCAGATAGGAATATAAGGGAGTTTGGATaGGTCACGGGGACCAAGAACCAATGTAAAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: FRIPDRNIREFG*VTGTKNQCKET Trigger: TGTCTCTTTACATTGGTTCTTGGTCCCCGTGACTCATCCAAACTCCCTTATATTCCTATCTGGAATGCGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS CAA 72 bp | GTCATTAAATTCTTCAGTGCAAGTGTGTCCCACATATaGCTGCAAGCTACAGAAATCACACCAGACTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: VIKFFSASVSHI*LQATEITPDSK Trigger: CTTGGAGTCTGGTGTGATTTCTGTAGCTTGCAGCAATATGTGGGACACACTTGCACTGAAGAATTTAATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS GCA 72 bp | TCATTAAATTCTTCAGTGCAAGTGTGTCCCACATATTaGTGCAAGCTACAGAAATCACACCAGACTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SLNSSVQVCPTY*CKLQKSHQTPR Trigger: TCTTGGAGTCTGGTGTGATTTCTGTAGCTTGCAGCAATATGTGGGACACACTTGCACTGAAGAATTTAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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| CDS TCA 72 bp | TTCATCATAGGAATAATTGAACTGTATCCTAGCTCATaGTTTATACCCATTTCACTCAGATTCTGGAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: FIIGIIELYPSS*FIPISLRFWSS Trigger: AGAACTCCAGAATCTGAGTGAAATGGGTATAAATCATGAGCTAGGATACAGTTCAATTATTCCTATGATGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409974.7 ENST00000614528.3 |
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