Pregenerated sensors for LINC02855 (Homo sapiens)
Ensembl gene IDs: ENSG00000254209Ensembl transcript IDs: ENST00000518922.1, ENST00000663221.1, ENST00000666599.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCAGTGGCATTCACACGGATTTGCTGGCACGACCTCACCATACATaGACACAGCTAGTGATGCATAAAGTCTTCATTCCAAGACTGACA | + |
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Preference number: 5 (lower is better) Translates to: SSGIHTDLLARPHHT*TQLVMHKVFIPRLT Trigger: TGTCAGTCTTGGAATGAAGACTTTATGCATCACTAGCTGTGTGCATGTATGGTGAGGTCGTGCCAGCAAATCCGTGTGAATGCCACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666599.1 |
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| CDS CCA 90 bp | ATGAGGGTAGTAACCATTCAACTAAACTTCCTTCTTTTAATCCAGTaGCATTCACACGGATTTGCTGGCACGACCTCACCATACATGCAC | + |
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Preference number: 5 (lower is better) Translates to: MRVVTIQLNFLLLIQ*HSHGFAGTTSPYMH Trigger: GTGCATGTATGGTGAGGTCGTGCCAGCAAATCCGTGTGAATGCCACTGGATTAAAAGAAGGAAGTTTAGTTGAATGGTTACTACCCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666599.1 |
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| CDS CCA 90 bp | ACTAAACTTCCTTCTTTTAATCCAGTGGCATTCACACGGATTTGCTaGCACGACCATGATCTAGGTGGGTTCTACTATCTCCTAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: TKLPSFNPVAFTRIC*HDHDLGGFYYLLNS Trigger: TGAGTTTAGGAGATAGTAGAACCCACCTAGATCATGGTCGTGCCAGCAAATCCGTGTGAATGCCACTGGATTAAAAGAAGGAAGTTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518922.1 ENST00000663221.1 |
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| CDS TCA 72 bp | TCCAGTGGCATTCACACGGATTTGCTGGCACGACCATaGTCTAGGTGGGTTCTACTATCTCCTAAACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSGIHTDLLARP*SRWVLLSPKLR Trigger: CCTGAGTTTAGGAGATAGTAGAACCCACCTAGATCATGGTCGTGCCAGCAAATCCGTGTGAATGCCACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518922.1 ENST00000663221.1 |
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| CDS CCA 72 bp | CCTTCTTTTAATCCAGTGGCATTCACACGGATTTGCTaGCACGACCATGATCTAGGTGGGTTCTACTATCTC | + |
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Preference number: 6 (lower is better) Translates to: PSFNPVAFTRIC*HDHDLGGFYYL Trigger: GAGATAGTAGAACCCACCTAGATCATGGTCGTGCCAGCAAATCCGTGTGAATGCCACTGGATTAAAAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518922.1 ENST00000663221.1 |
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| CDS GCA 72 bp | CTTCCTTCTTTTAATCCAGTGGCATTCACACGGATTTaGTGGCACGACCATGATCTAGGTGGGTTCTACTAT | + |
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Preference number: 6 (lower is better) Translates to: LPSFNPVAFTRI*WHDHDLGGFYY Trigger: ATAGTAGAACCCACCTAGATCATGGTCGTGCCAGCAAATCCGTGTGAATGCCACTGGATTAAAAGAAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518922.1 ENST00000663221.1 |
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| CDS GCA 72 bp | ATTCACACGGATTTGCTGGCACGACCTCACCATACATaGACACAGCTAGTGATGCATAAAGTCTTCATTCCA | + |
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Preference number: 6 (lower is better) Translates to: IHTDLLARPHHT*TQLVMHKVFIP Trigger: TGGAATGAAGACTTTATGCATCACTAGCTGTGTGCATGTATGGTGAGGTCGTGCCAGCAAATCCGTGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666599.1 |
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| CDS CAA 72 bp | CACTTCGTTGGAGGATTCAAGAGCTTAAGTGAAGGCTaGAATAAGAGCTCCCAGGTAGACAAGCTAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HFVGGFKSLSEG*NKSSQVDKLGF Trigger: AAAGCCTAGCTTGTCTACCTGGGAGCTCTTATTCAAGCCTTCACTTAAGCTCTTGAATCCTCCAACGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518922.1 |
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| CDS CAA 72 bp | AAACTCAGGTCACTCCTCTCAAGTCTTGGAGGGTCATaGATTATCTTCTCAGAAAGGGAAACAGTATCCCCC | + |
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Preference number: 6 (lower is better) Translates to: KLRSLLSSLGGS*IIFSERETVSP Trigger: GGGGGATACTGTTTCCCTTTCTGAGAAGATAATCAATGACCCTCCAAGACTTGAGAGGAGTGACCTGAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663221.1 |
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| CDS CAA 90 bp | TTTGAGCAGCACTTCGTTGGAGGATTCAAGAGCTTAAGTGAAGGCTaGAATAAGAGCTCCCAGGTAGACAAGCTAGGCTTTCTTCAAAAA | + |
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Preference number: 6 (lower is better) Translates to: FEQHFVGGFKSLSEG*NKSSQVDKLGFLQK Trigger: TTTTTGAAGAAAGCCTAGCTTGTCTACCTGGGAGCTCTTATTCAAGCCTTCACTTAAGCTCTTGAATCCTCCAACGAAGTGCTGCTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518922.1 |
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| CDS CAA 90 bp | CTATCTCCTAAACTCAGGTCACTCCTCTCAAGTCTTGGAGGGTCATaGATTATCTTCTCAGAAAGGGAAACAGTATCCCCCTTGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSPKLRSLLSSLGGS*IIFSERETVSPLKK Trigger: TTTCTTCAAGGGGGATACTGTTTCCCTTTCTGAGAAGATAATCAATGACCCTCCAAGACTTGAGAGGAGTGACCTGAGTTTAGGAGATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663221.1 |
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| CDS CAA 72 bp | GCACATGTGAACAACACGGACTTATTTCCATTCTGCTaGCTTTCAAATCCAAACTTAGGGAAAAGGCTAAGC | + |
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Preference number: 6 (lower is better) Translates to: AHVNNTDLFPFC*LSNPNLGKRLS Trigger: GCTTAGCCTTTTCCCTAAGTTTGGATTTGAAAGCAAGCAGAATGGAAATAAGTCCGTGTTGTTCACATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663221.1 ENST00000666599.1 |
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| CDS CAA 90 bp | AAGGCATCTGTAAAATTAGGGCAGTTCATGCATATTCCAGGCAGCTaGTTGATTACACCAAAACTTGTGTTCAGTTCATCAGCTCACTCT | + |
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Preference number: 6 (lower is better) Translates to: KASVKLGQFMHIPGS*LITPKLVFSSSAHS Trigger: AGAGTGAGCTGATGAACTGAACACAAGTTTTGGTGTAATCAACAAGCTGCCTGGAATATGCATGAACTGCCCTAATTTTACAGATGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663221.1 ENST00000666599.1 |
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| CDS CAA 90 bp | GCATCTGTAAAATTAGGGCAGTTCATGCATATTCCAGGCAGCTTGTaGATTACACCAAAACTTGTGTTCAGTTCATCAGCTCACTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ASVKLGQFMHIPGSL*ITPKLVFSSSAHSF Trigger: AAAAGAGTGAGCTGATGAACTGAACACAAGTTTTGGTGTAATCAACAAGCTGCCTGGAATATGCATGAACTGCCCTAATTTTACAGATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663221.1 ENST00000666599.1 |
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| CDS CAA 72 bp | TTGATTATCTTCTCAGAAAGGGAAACAGTATCCCCCTaGAAGAAAAACTGGGAACATACATGCACACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: LIIFSERETVSP*KKNWEHTCTQL Trigger: TAGCTGTGTGCATGTATGTTCCCAGTTTTTCTTCAAGGGGGATACTGTTTCCCTTTCTGAGAAGATAATCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000663221.1 |
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| CDS CAA 72 bp | AAATTAGGGCAGTTCATGCATATTCCAGGCAGCTTGTaGATTACACCAAAACTTGTGTTCAGTTCATCAGCT | + |
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Preference number: 6 (lower is better) Translates to: KLGQFMHIPGSL*ITPKLVFSSSA Trigger: AGCTGATGAACTGAACACAAGTTTTGGTGTAATCAACAAGCTGCCTGGAATATGCATGAACTGCCCTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663221.1 ENST00000666599.1 |
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| CDS CAA 72 bp | GTAAAATTAGGGCAGTTCATGCATATTCCAGGCAGCTaGTTGATTACACCAAAACTTGTGTTCAGTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: VKLGQFMHIPGS*LITPKLVFSSS Trigger: TGATGAACTGAACACAAGTTTTGGTGTAATCAACAAGCTGCCTGGAATATGCATGAACTGCCCTAATTTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663221.1 ENST00000666599.1 |
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