Pregenerated sensors for LINC02852 (Homo sapiens)
Ensembl gene IDs: ENSG00000285866Ensembl transcript IDs: ENST00000647740.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTTAGCACATGCGGTGTGCCGTACACCAGGAGCAGGGCGAGTAAGTaGCAGGAGACAGGGACCCATTCTCCAGCTATTTCAGCAAAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: FSTCGVPYTRSRASK*QETGTHSPAISAKR Trigger: ACGCTTTGCTGAAATAGCTGGAGAATGGGTCCCTGTCTCCTGCCACTTACTCGCCCTGCTCCTGGTGTACGGCACACCGCATGTGCTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS TCA 90 bp | TTAGCTCCTGGGCAGACCATAAGGTGGAGAGGTGCAGGCGAGATCTaGAGTGAAGTTGACTTCCCAGTGGTTGTACAGATGCTCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LAPGQTIRWRGAGEI*SEVDFPVVVQMLLA Trigger: AGCCAAGAGCATCTGTACAACCACTGGGAAGTCAACTTCACTTCAGATCTCGCCTGCACCTCTCCACCTTATGGTCTGCCCAGGAGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CCA 90 bp | GGTGGAGAGGTGCAGGCGAGATCTGAAGTGAAGTTGACTTCCCAGTaGTTGTACAGATGCTCTTGGCTAACTTGGAGCAGGATGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GGEVQARSEVKLTSQ*LYRCSWLTWSRMRN Trigger: ATTTCTCATCCTGCTCCAAGTTAGCCAAGAGCATCTGTACAACCACTGGGAAGTCAACTTCACTTCAGATCTCGCCTGCACCTCTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CCA 90 bp | CAGAGATCCTTAACTAGGAGGAATGCTGTTTCAGAGGGCTCAGAATaGGTAATTAGGAGACTGTCACAAGGAAGCGTGAAGAACTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: QRSLTRRNAVSEGSE*VIRRLSQGSVKNCT Trigger: AGTGCAGTTCTTCACGCTTCCTTGTGACAGTCTCCTAATTACCCATTCTGAGCCCTCTGAAACAGCATTCCTCCTAGTTAAGGATCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS TCA 90 bp | TTGGAGGTTGCATTTGGATTAACTTTTGGCATGATGAAAGGATTTTaGCAACTGGAGGTAGTAATATTTGTAGCAACAACATCCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LEVAFGLTFGMMKGF*QLEVVIFVATTSSL Trigger: AAGAGAGGATGTTGTTGCTACAAATATTACTACCTCCAGTTGTCAAAATCCTTTCATCATGCCAAAAGTTAATCCAAATGCAACCTCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CCA 72 bp | TGCGGTGTGCCGTACACCAGGAGCAGGGCGAGTAAGTaGCAGGAGACAGGGACCCATTCTCCAGCTATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CGVPYTRSRASK*QETGTHSPAIS Trigger: TGAAATAGCTGGAGAATGGGTCCCTGTCTCCTGCCACTTACTCGCCCTGCTCCTGGTGTACGGCACACCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CCA 72 bp | CTCCAGGTCTGCTACATCTCCAAATCCATTAGCTCCTaGGCAGACCATAAGGTGGAGAGGTGCAGGCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LQVCYISKSISS*ADHKVERCRRD Trigger: ATCTCGCCTGCACCTCTCCACCTTATGGTCTGCCCAGGAGCTAATGGATTTGGAGATGTAGCAGACCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS TCA 72 bp | GGGCAGACCATAAGGTGGAGAGGTGCAGGCGAGATCTaGAGTGAAGTTGACTTCCCAGTGGTTGTACAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GQTIRWRGAGEI*SEVDFPVVVQM Trigger: CATCTGTACAACCACTGGGAAGTCAACTTCACTTCAGATCTCGCCTGCACCTCTCCACCTTATGGTCTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CCA 72 bp | GTGCAGGCGAGATCTGAAGTGAAGTTGACTTCCCAGTaGTTGTACAGATGCTCTTGGCTAACTTGGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VQARSEVKLTSQ*LYRCSWLTWSR Trigger: CCTGCTCCAAGTTAGCCAAGAGCATCTGTACAACCACTGGGAAGTCAACTTCACTTCAGATCTCGCCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CAA 90 bp | GGAGAGGTGCAGGCGAGATCTGAAGTGAAGTTGACTTCCCAGTGGTaGTACAGATGCTCTTGGCTAACTTGGAGCAGGATGAGAAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: GEVQARSEVKLTSQW*YRCSWLTWSRMRNP Trigger: TGGATTTCTCATCCTGCTCCAAGTTAGCCAAGAGCATCTGTACAACCACTGGGAAGTCAACTTCACTTCAGATCTCGCCTGCACCTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CAA 72 bp | CAGGCGAGATCTGAAGTGAAGTTGACTTCCCAGTGGTaGTACAGATGCTCTTGGCTAACTTGGAGCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: QARSEVKLTSQW*YRCSWLTWSRM Trigger: CATCCTGCTCCAAGTTAGCCAAGAGCATCTGTACAACCACTGGGAAGTCAACTTCACTTCAGATCTCGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CAA 90 bp | AGTGAAGTTGACTTCCCAGTGGTTGTACAGATGCTCTTGGCTAACTaGGAGCAGGATGAGAAATCCACTTTAGCACATGCGGTGTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SEVDFPVVVQMLLAN*EQDEKSTLAHAVCR Trigger: ACGGCACACCGCATGTGCTAAAGTGGATTTCTCATCCTGCTCCAAGTTAGCCAAGAGCATCTGTACAACCACTGGGAAGTCAACTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS TCA 72 bp | TCCAGCTATTTCAGCAAAGCGTGTGGTGTCTTGCGGTaGTGGCAGAGATCCTTAACTAGGAGGAATGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSYFSKACGVLR*WQRSLTRRNAV Trigger: AACAGCATTCCTCCTAGTTAAGGATCTCTGCCATCACCGCAAGACACCACACGCTTTGCTGAAATAGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CAA 72 bp | GACTTCCCAGTGGTTGTACAGATGCTCTTGGCTAACTaGGAGCAGGATGAGAAATCCACTTTAGCACATGCG | + |
|
Preference number: 6 (lower is better) Translates to: DFPVVVQMLLAN*EQDEKSTLAHA Trigger: CGCATGTGCTAAAGTGGATTTCTCATCCTGCTCCAAGTTAGCCAAGAGCATCTGTACAACCACTGGGAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS GCA 72 bp | TCTGAAGTGAAGTTGACTTCCCAGTGGTTGTACAGATaGTCTTGGCTAACTTGGAGCAGGATGAGAAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: SEVKLTSQWLYR*SWLTWSRMRNP Trigger: TGGATTTCTCATCCTGCTCCAAGTTAGCCAAGAGCATCTGTACAACCACTGGGAAGTCAACTTCACTTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CAA 72 bp | AGTGAAGTTGACTTCCCAGTGGTTGTACAGATGCTCTaGGCTAACTTGGAGCAGGATGAGAAATCCACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SEVDFPVVVQML*ANLEQDEKSTL Trigger: TAAAGTGGATTTCTCATCCTGCTCCAAGTTAGCCAAGAGCATCTGTACAACCACTGGGAAGTCAACTTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CAA 72 bp | TTCAGAGGGGAAAGAGCGCTTCCAAATACAATAACCTaGGAGGTTGCATTTGGATTAACTTTTGGCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: FRGERALPNTIT*EVAFGLTFGMM Trigger: CATCATGCCAAAAGTTAATCCAAATGCAACCTCCAAGGTTATTGTATTTGGAAGCGCTCTTTCCCCTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CAA 90 bp | GCTCTACAGTTCAGAGGGGAAAGAGCGCTTCCAAATACAATAACCTaGGAGGTTGCATTTGGATTAACTTTTGGCATGATGAAAGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: ALQFRGERALPNTIT*EVAFGLTFGMMKGF Trigger: AAATCCTTTCATCATGCCAAAAGTTAATCCAAATGCAACCTCCAAGGTTATTGTATTTGGAAGCGCTCTTTCCCCTCTGAACTGTAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CAA 90 bp | CTTGGAGGTTGCATTTGGATTAACTTTTGGCATGATGAAAGGATTTaGACAACTGGAGGTAGTAATATTTGTAGCAACAACATCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGGCIWINFWHDERI*TTGGSNICSNNILS Trigger: AGAGAGGATGTTGTTGCTACAAATATTACTACCTCCAGTTGTCAAAATCCTTTCATCATGCCAAAAGTTAATCCAAATGCAACCTCCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||
| CDS CAA 72 bp | TGCATTTGGATTAACTTTTGGCATGATGAAAGGATTTaGACAACTGGAGGTAGTAATATTTGTAGCAACAAC | + |
|
Preference number: 6 (lower is better) Translates to: CIWINFWHDERI*TTGGSNICSNN Trigger: GTTGTTGCTACAAATATTACTACCTCCAGTTGTCAAAATCCTTTCATCATGCCAAAAGTTAATCCAAATGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647740.1 |
||