Pregenerated sensors for LINC02851 (Homo sapiens)
Ensembl gene IDs: ENSG00000229611Ensembl transcript IDs: ENST00000412339.2, ENST00000664463.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAAGCTCCGCTGGGCTGCACCGCCAACTCTGGTCCTCTAGAGAGCTaGGAGGATGGGGATCAAACACTCAGTGGGGCCGGGCAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EAPLGCTANSGPLES*EDGDQTLSGAGQAV Trigger: GACAGCCTGCCCGGCCCCACTGAGTGTTTGATCCCCATCCTCGCAGCTCTCTAGAGGACCAGAGTTGGCGGTGCAGCCCAGCGGAGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS CCA 90 bp | GCTGGGCTGCACCGCCAACTCTGGTCCTCTAGAGAGCTGCGAGGATaGGGATCAAACACTCAGTGGGGCCGGGCAGGCTGTCTGTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AGLHRQLWSSRELRG*GSNTQWGRAGCLCP Trigger: CGGACACAGACAGCCTGCCCGGCCCCACTGAGTGTTTGATCCCCATCCTCGCAGCTCTCTAGAGGACCAGAGTTGGCGGTGCAGCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS GCA 90 bp | GGGCTAAAATGTTGGAGGACATGTCGCTTCGAAGCTCCGCTGGGCTaGACCGCCAACTCTGGTCCTCTAGAGAGCTGCGAGGATGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLKCWRTCRFEAPLG*TANSGPLESCEDGD Trigger: ATCCCCATCCTCGCAGCTCTCTAGAGGACCAGAGTTGGCGGTGCAGCCCAGCGGAGCTTCGAAGCGACATGTCCTCCAACATTTTAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS CCA 90 bp | TGGGTTATATCCTCAGGGGCCACAAGACTTGCTGGGCTAAAATGTTaGAGGACATGTCGCTTCGAAGCTCCGCTGGGCTGCACCGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: WVISSGATRLAGLKC*RTCRFEAPLGCTAN Trigger: GTTGGCGGTGCAGCCCAGCGGAGCTTCGAAGCGACATGTCCTCCAACATTTTAGCCCAGCAAGTCTTGTGGCCCCTGAGGATATAACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS CCA 90 bp | AAGCAGCCCTCTCTGGGTTATATCCTCAGGGGCCACAAGACTTGCTaGGCTAAAATGTTGGAGGACATGTCGCTTCGAAGCTCCGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KQPSLGYILRGHKTC*AKMLEDMSLRSSAG Trigger: CCCAGCGGAGCTTCGAAGCGACATGTCCTCCAACATTTTAGCCCAGCAAGTCTTGTGGCCCCTGAGGATATAACCCAGAGAGGGCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS GCA 90 bp | AGAAAGCAGCCCTCTCTGGGTTATATCCTCAGGGGCCACAAGACTTaGTGGGCTAAAATGTTGGAGGACATGTCGCTTCGAAGCTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RKQPSLGYILRGHKT*WAKMLEDMSLRSSA Trigger: AGCGGAGCTTCGAAGCGACATGTCCTCCAACATTTTAGCCCAGCAAGTCTTGTGGCCCCTGAGGATATAACCCAGAGAGGGCTGCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS GCA 90 bp | AGCCTAGGATTTATTGTGAGCTGGTCCCCCAAGGGTCAAGAAAGCTaGCCAGGGCAGACAGGGTCTCAACTGTGTGTACTCCACTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLGFIVSWSPKGQES*PGQTGSQLCVLHLN Trigger: GTTCAAGTGGAGTACACACAGTTGAGACCCTGTCTGCCCTGGGCAGCTTTCTTGACCCTTGGGGGACCAGCTCACAATAAATCCTAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS GCA 72 bp | CTGGGCTGCACCGCCAACTCTGGTCCTCTAGAGAGCTaGGAGGATGGGGATCAAACACTCAGTGGGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGCTANSGPLES*EDGDQTLSGAG Trigger: CCCGGCCCCACTGAGTGTTTGATCCCCATCCTCGCAGCTCTCTAGAGGACCAGAGTTGGCGGTGCAGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS CCA 72 bp | GACGTCGCAGTCCCAGTAGTCTGTCTCCGCGTTTCTTaGCTGCCTGGTCCCGGCCGGTGCGATTTGAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: DVAVPVVCLRVS*LPGPGRCDLRL Trigger: CAGTCTCAAATCGCACCGGCCGGGACCAGGCAGCCAAGAAACGCGGAGACAGACTACTGGGACTGCGACGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412339.2 |
||
| CDS CCA 72 bp | CACCGCCAACTCTGGTCCTCTAGAGAGCTGCGAGGATaGGGATCAAACACTCAGTGGGGCCGGGCAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HRQLWSSRELRG*GSNTQWGRAGC Trigger: ACAGCCTGCCCGGCCCCACTGAGTGTTTGATCCCCATCCTCGCAGCTCTCTAGAGGACCAGAGTTGGCGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS GCA 72 bp | TGTTGGAGGACATGTCGCTTCGAAGCTCCGCTGGGCTaGACCGCCAACTCTGGTCCTCTAGAGAGCTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: CWRTCRFEAPLG*TANSGPLESCE Trigger: CTCGCAGCTCTCTAGAGGACCAGAGTTGGCGGTGCAGCCCAGCGGAGCTTCGAAGCGACATGTCCTCCAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS CAA 72 bp | AGACGTCGCAGTCCCAGTAGTCTGTCTCCGCGTTTCTaGGCTGCCTGGTCCCGGCCGGTGCGATTTGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: RRRSPSSLSPRF*AAWSRPVRFET Trigger: AGTCTCAAATCGCACCGGCCGGGACCAGGCAGCCAAGAAACGCGGAGACAGACTACTGGGACTGCGACGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412339.2 |
||
| CDS CCA 72 bp | TCCTCAGGGGCCACAAGACTTGCTGGGCTAAAATGTTaGAGGACATGTCGCTTCGAAGCTCCGCTGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSGATRLAGLKC*RTCRFEAPLGC Trigger: GCAGCCCAGCGGAGCTTCGAAGCGACATGTCCTCCAACATTTTAGCCCAGCAAGTCTTGTGGCCCCTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS CAA 90 bp | CTGGGTTATATCCTCAGGGGCCACAAGACTTGCTGGGCTAAAATGTaGGAGGACATGTCGCTTCGAAGCTCCGCTGGGCTGCACCGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LGYILRGHKTCWAKM*EDMSLRSSAGLHRQ Trigger: TTGGCGGTGCAGCCCAGCGGAGCTTCGAAGCGACATGTCCTCCAACATTTTAGCCCAGCAAGTCTTGTGGCCCCTGAGGATATAACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS TCA 72 bp | CAGGGCAGACAGGGTCTCAACTGTGTGTACTCCACTTaGACCACAGCCGAGAAATCCCAGAAAGCAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGRQGLNCVYST*TTAEKSQKAAL Trigger: GAGGGCTGCTTTCTGGGATTTCTCGGCTGTGGTTCAAGTGGAGTACACACAGTTGAGACCCTGTCTGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS CCA 72 bp | AACCACAGCCGAGAAATCCCAGAAAGCAGCCCTCTCTaGGTTATATCCTCAGGGGCCACAAGACTTGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NHSREIPESSPL*VISSGATRLAG Trigger: CCCAGCAAGTCTTGTGGCCCCTGAGGATATAACCCAGAGAGGGCTGCTTTCTGGGATTTCTCGGCTGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS CAA 72 bp | CCAGGGCAGACAGGGTCTCAACTGTGTGTACTCCACTaGAACCACAGCCGAGAAATCCCAGAAAGCAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGQTGSQLCVLH*NHSREIPESSP Trigger: AGGGCTGCTTTCTGGGATTTCTCGGCTGTGGTTCAAGTGGAGTACACACAGTTGAGACCCTGTCTGCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS GCA 72 bp | TTTATTGTGAGCTGGTCCCCCAAGGGTCAAGAAAGCTaGCCAGGGCAGACAGGGTCTCAACTGTGTGTACTC | + |
|
Preference number: 6 (lower is better) Translates to: FIVSWSPKGQES*PGQTGSQLCVL Trigger: GAGTACACACAGTTGAGACCCTGTCTGCCCTGGGCAGCTTTCTTGACCCTTGGGGGACCAGCTCACAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS GCA 72 bp | CCCTCTCTGGGTTATATCCTCAGGGGCCACAAGACTTaGTGGGCTAAAATGTTGGAGGACATGTCGCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: PSLGYILRGHKT*WAKMLEDMSLR Trigger: TCGAAGCGACATGTCCTCCAACATTTTAGCCCAGCAAGTCTTGTGGCCCCTGAGGATATAACCCAGAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||
| CDS CCA 72 bp | TCTCTGGGTTATATCCTCAGGGGCCACAAGACTTGCTaGGCTAAAATGTTGGAGGACATGTCGCTTCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGYILRGHKTC*AKMLEDMSLRS Trigger: GCTTCGAAGCGACATGTCCTCCAACATTTTAGCCCAGCAAGTCTTGTGGCCCCTGAGGATATAACCCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000412339.2 ENST00000664463.1 |
||