Pregenerated sensors for LINC02847 (Homo sapiens)
Ensembl gene IDs: ENSG00000253702Ensembl transcript IDs: ENST00000523038.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTTGCTGCAAACCATTGGCTATCTCCCAGCAGTCTGAAGGGGGCTaGTGGCTGTGGGGTCCCGCTTGTGCCCGCCTCCTCCTTCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GCCKPLAISQQSEGG*WLWGPACARLLLLC Trigger: ACAGAGAAGGAGGAGGCGGGCACAAGCGGGACCCCACAGCCAGCAGCCCCCTTCAGACTGCTGGGAGATAGCCAATGGTTTGCAGCAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS GCA 90 bp | AGGGTCTTGGTCGCCTCTGTCCTAGCTGGGCTTTCACTTGGTTGCTaGAAACCATTGGCTATCTCCCAGCAGTCTGAAGGGGGCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RVLVASVLAGLSLGC*KPLAISQQSEGGCW Trigger: CCAGCAGCCCCCTTCAGACTGCTGGGAGATAGCCAATGGTTTGCAGCAACCAAGTGAAAGCCCAGCTAGGACAGAGGCGACCAAGACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS TCA 90 bp | TCCGGCCTCACATACTGCAGACGGGGTTACGCAGCCGTGGTCTCTTaGCCACGCTGCTCTTCCATAAAGACTCCACAAACGACTGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: SGLTYCRRGYAAVVS*PRCSSIKTPQTTAK Trigger: TTTTGCAGTCGTTTGTGGAGTCTTTATGGAAGAGCAGCGTGGTCAAGAGACCACGGCTGCGTAACCCCGTCTGCAGTATGTGAGGCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS GCA 90 bp | AGACTCCACAAACGACTGCAAAAGCCGAAGGCTGGCCACCTTCTATaGCGATGTTGTGACTCCAGAATGCTTGCAAAGGGGAATCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RLHKRLQKPKAGHLL*RCCDSRMLAKGNPG Trigger: GCCTGGATTCCCCTTTGCAAGCATTCTGGAGTCACAACATCGGCATAGAAGGTGGCCAGCCTTCGGCTTTTGCAGTCGTTTGTGGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS TCA 90 bp | ACGACTGCAAAAGCCGAAGGCTGGCCACCTTCTATGCCGATGTTGTaGCTCCAGAATGCTTGCAAAGGGGAATCCAGGCACAATCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: TTAKAEGWPPSMPML*LQNACKGESRHNLQ Trigger: CTGAAGATTGTGCCTGGATTCCCCTTTGCAAGCATTCTGGAGTCACAACATCGGCATAGAAGGTGGCCAGCCTTCGGCTTTTGCAGTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS GCA 90 bp | AGCCGAAGGCTGGCCACCTTCTATGCCGATGTTGTGACTCCAGAATaGTTGCAAAGGGGAATCCAGGCACAATCTTCAGCTGTTGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: SRRLATFYADVVTPE*LQRGIQAQSSAVVH Trigger: ATGCACAACAGCTGAAGATTGTGCCTGGATTCCCCTTTGCAAGCATTCTGGAGTCACAACATCGGCATAGAAGGTGGCCAGCCTTCGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS GCA 90 bp | GGTCTCTTGACCACGCTGCTCTTCCATAAAGACTCCACAAACGACTaGAAAAGCCGAAGGCTGGCCACCTTCTATGCCGATGTTGTGACT | + |
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Preference number: 5 (lower is better) Translates to: GLLTTLLFHKDSTND*KSRRLATFYADVVT Trigger: AGTCACAACATCGGCATAGAAGGTGGCCAGCCTTCGGCTTTTGCAGTCGTTTGTGGAGTCTTTATGGAAGAGCAGCGTGGTCAAGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS CCA 72 bp | CCATTGGCTATCTCCCAGCAGTCTGAAGGGGGCTGCTaGCTGTGGGGTCCCGCTTGTGCCCGCCTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PLAISQQSEGGC*LWGPACARLLL Trigger: AAGGAGGAGGCGGGCACAAGCGGGACCCCACAGCCAGCAGCCCCCTTCAGACTGCTGGGAGATAGCCAATGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS GCA 72 bp | AAACCATTGGCTATCTCCCAGCAGTCTGAAGGGGGCTaGTGGCTGTGGGGTCCCGCTTGTGCCCGCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: KPLAISQQSEGG*WLWGPACARLL Trigger: GAGGAGGCGGGCACAAGCGGGACCCCACAGCCAGCAGCCCCCTTCAGACTGCTGGGAGATAGCCAATGGTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS CAA 72 bp | TCGCCAAGGAGGGCAGTTGAGGCTGCAGCGAGGGTCTaGGTCGCCTCTGTCCTAGCTGGGCTTTCACTTGGT | + |
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Preference number: 6 (lower is better) Translates to: SPRRAVEAAARV*VASVLAGLSLG Trigger: ACCAAGTGAAAGCCCAGCTAGGACAGAGGCGACCAAGACCCTCGCTGCAGCCTCAACTGCCCTCCTTGGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS CAA 90 bp | GTCGCCTCTGTCCTAGCTGGGCTTTCACTTGGTTGCTGCAAACCATaGGCTATCTCCCAGCAGTCTGAAGGGGGCTGCTGGCTGTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: VASVLAGLSLGCCKP*AISQQSEGGCWLWG Trigger: ACCCCACAGCCAGCAGCCCCCTTCAGACTGCTGGGAGATAGCCAATGGTTTGCAGCAACCAAGTGAAAGCCCAGCTAGGACAGAGGCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS CCA 72 bp | TTCCTTGCTCTTGAGTCCAAGTATTTGCCCCAGGCATaGGAGCAGCCACCTCGCCAAGGAGGGCAGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FLALESKYLPQA*EQPPRQGGQLR Trigger: CCTCAACTGCCCTCCTTGGCGAGGTGGCTGCTCCCATGCCTGGGGCAAATACTTGGACTCAAGAGCAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS CAA 72 bp | GTCCTAGCTGGGCTTTCACTTGGTTGCTGCAAACCATaGGCTATCTCCCAGCAGTCTGAAGGGGGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VLAGLSLGCCKP*AISQQSEGGCW Trigger: CCAGCAGCCCCCTTCAGACTGCTGGGAGATAGCCAATGGTTTGCAGCAACCAAGTGAAAGCCCAGCTAGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS CAA 90 bp | CTCCGGCCTCACATACTGCAGACGGGGTTACGCAGCCGTGGTCTCTaGACCACGCTGCTCTTCCATAAAGACTCCACAAACGACTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LRPHILQTGLRSRGL*TTLLFHKDSTNDCK Trigger: TTTGCAGTCGTTTGTGGAGTCTTTATGGAAGAGCAGCGTGGTCAAGAGACCACGGCTGCGTAACCCCGTCTGCAGTATGTGAGGCCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS GCA 72 bp | GTCGCCTCTGTCCTAGCTGGGCTTTCACTTGGTTGCTaGAAACCATTGGCTATCTCCCAGCAGTCTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VASVLAGLSLGC*KPLAISQQSEG Trigger: CCCTTCAGACTGCTGGGAGATAGCCAATGGTTTGCAGCAACCAAGTGAAAGCCCAGCTAGGACAGAGGCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS TCA 72 bp | AAAGCCGAAGGCTGGCCACCTTCTATGCCGATGTTGTaGCTCCAGAATGCTTGCAAAGGGGAATCCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: KAEGWPPSMPML*LQNACKGESRH Trigger: GTGCCTGGATTCCCCTTTGCAAGCATTCTGGAGTCACAACATCGGCATAGAAGGTGGCCAGCCTTCGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS CAA 72 bp | CACATACTGCAGACGGGGTTACGCAGCCGTGGTCTCTaGACCACGCTGCTCTTCCATAAAGACTCCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: HILQTGLRSRGL*TTLLFHKDSTN Trigger: GTTTGTGGAGTCTTTATGGAAGAGCAGCGTGGTCAAGAGACCACGGCTGCGTAACCCCGTCTGCAGTATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS GCA 72 bp | ACCACGCTGCTCTTCCATAAAGACTCCACAAACGACTaGAAAAGCCGAAGGCTGGCCACCTTCTATGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: TTLLFHKDSTND*KSRRLATFYAD Trigger: ATCGGCATAGAAGGTGGCCAGCCTTCGGCTTTTGCAGTCGTTTGTGGAGTCTTTATGGAAGAGCAGCGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS CAA 90 bp | CGAAGGCTGGCCACCTTCTATGCCGATGTTGTGACTCCAGAATGCTaGCAAAGGGGAATCCAGGCACAATCTTCAGCTGTTGTGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: RRLATFYADVVTPEC*QRGIQAQSSAVVHP Trigger: TGGATGCACAACAGCTGAAGATTGTGCCTGGATTCCCCTTTGCAAGCATTCTGGAGTCACAACATCGGCATAGAAGGTGGCCAGCCTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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| CDS CAA 72 bp | GCCACCTTCTATGCCGATGTTGTGACTCCAGAATGCTaGCAAAGGGGAATCCAGGCACAATCTTCAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ATFYADVVTPEC*QRGIQAQSSAV Trigger: AACAGCTGAAGATTGTGCCTGGATTCCCCTTTGCAAGCATTCTGGAGTCACAACATCGGCATAGAAGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523038.1 |
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