Pregenerated sensors for LINC02846 (Homo sapiens)
Ensembl gene IDs: ENSG00000260193Ensembl transcript IDs: ENST00000563018.1, ENST00000566567.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGGGGCAGGCCCAAGGTGCTAGGGGCTCCCGGGAGGACTGGCCATaGCCACCCAGCATCCCTGTGCCTGGCCTGGGCCTCGGTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: WGQAQGARGSREDWP*PPSIPVPGLGLGGQ Trigger: CTGGCCACCGAGGCCCAGGCCAGGCACAGGGATGCTGGGTGGCCATGGCCAGTCCTCCCGGGAGCCCCTAGCACCTTGGGCCTGCCCCCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS GCA 90 bp | GAGGCAGATCCTGGCTGGAGCTGGCGGAGACTTACGGCCACACCCTaGCAAGGTGTGCCCACTGGGACCCGGGCCCAGCCTGTCACGGCG | + |
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Preference number: 5 (lower is better) Translates to: EADPGWSWRRLTATP*QGVPTGTRAQPVTA Trigger: CGCCGTGACAGGCTGGGCCCGGGTCCCAGTGGGCACACCTTGGCAGGGTGTGGCCGTAAGTCTCCGCCAGCTCCAGCCAGGATCTGCCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS CCA 90 bp | GAGCTGGCGGAGACTTACGGCCACACCCTGCCAAGGTGTGCCCACTaGGACCCGGGCCCAGCCTGTCACGGCGCCTCTCCCTGTGCCATC | + |
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Preference number: 5 (lower is better) Translates to: ELAETYGHTLPRCAH*DPGPACHGASPCAI Trigger: GATGGCACAGGGAGAGGCGCCGTGACAGGCTGGGCCCGGGTCCCAGTGGGCACACCTTGGCAGGGTGTGGCCGTAAGTCTCCGCCAGCTC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS CCA 90 bp | GCCCAGGCCTGTCCCATCCCGAGGGAGGCAGATCCTGGCTGGAGCTaGCGGAGACTTACGGCCACACCCTGCCAAGGTGTGCCCACTGGG | + |
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Preference number: 5 (lower is better) Translates to: AQACPIPREADPGWS*RRLTATPCQGVPTG Trigger: CCCAGTGGGCACACCTTGGCAGGGTGTGGCCGTAAGTCTCCGCCAGCTCCAGCCAGGATCTGCCTCCCTCGGGATGGGACAGGCCTGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS GCA 90 bp | CCCAGCGCAGTGAGCGGGGCCAAGGGTCTAGCAGCACTCGAGTTCTaGCCAAAGACGAGAGAGAGGGTGCCGGCCTACGTGCGCCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: PSAVSGAKGLAALEF*PKTRERVPAYVRPL Trigger: CAGCGGGCGCACGTAGGCCGGCACCCTCTCTCTCGTCTTTGGGCAGAACTCGAGTGCTGCTAGACCCTTGGCCCCGCTCACTGCGCTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS GCA 90 bp | CAGGTCAGAGGAGTCCAGGGACCGCCCTTGCTGGGAGGAAATGGGTaGAGTGCGGCCCAGCGCAGTGAGCGGGGCCAAGGGTCTAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: QVRGVQGPPLLGGNG*SAAQRSERGQGSSS Trigger: GCTGCTAGACCCTTGGCCCCGCTCACTGCGCTGGGCCGCACTGCACCCATTTCCTCCCAGCAAGGGCGGTCCCTGGACTCCTCTGACCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS CCA 90 bp | ACTCGGAAGCAGTTCAGGTCAGAGGAGTCCAGGGACCGCCCTTGCTaGGAGGAAATGGGTGCAGTGCGGCCCAGCGCAGTGAGCGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: TRKQFRSEESRDRPC*EEMGAVRPSAVSGA Trigger: GGCCCCGCTCACTGCGCTGGGCCGCACTGCACCCATTTCCTCCCAGCAAGGGCGGTCCCTGGACTCCTCTGACCTGAACTGCTTCCGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS GCA 90 bp | GGTGCCGGCCTACGTGCGCCCGCTGGGAAGAACTGGAAATCCATGTaGTCCCGTTCTGCGAATCCCTTCACCAGGGCGTCGGCCACCGGA | + |
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Preference number: 5 (lower is better) Translates to: GAGLRAPAGKNWKSM*SRSANPFTRASATG Trigger: TCCGGTGGCCGACGCCCTGGTGAAGGGATTCGCAGAACGGGAGCACATGGATTTCCAGTTCTTCCCAGCGGGCGCACGTAGGCCGGCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS GCA 90 bp | CAAACTCGGAAGCAGTTCAGGTCAGAGGAGTCCAGGGACCGCCCTTaGTGGGAGGAAATGGGTGCAGTGCGGCCCAGCGCAGTGAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: QTRKQFRSEESRDRP*WEEMGAVRPSAVSG Trigger: CCCGCTCACTGCGCTGGGCCGCACTGCACCCATTTCCTCCCAGCAAGGGCGGTCCCTGGACTCCTCTGACCTGAACTGCTTCCGAGTTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS CCA 90 bp | CATACAACAGGCCCAGGCCTGTCCCATCCCGAGGGAGGCAGATCCTaGCTGGAGCTGGCGGAGACTTACGGCCACACCCTGCCAAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: HTTGPGLSHPEGGRS*LELAETYGHTLPRC Trigger: ACACCTTGGCAGGGTGTGGCCGTAAGTCTCCGCCAGCTCCAGCCAGGATCTGCCTCCCTCGGGATGGGACAGGCCTGGGCCTGTTGTATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS CCA 90 bp | GACGAGAGAGAGGGTGCCGGCCTACGTGCGCCCGCTGGGAAGAACTaGAAATCCATGTGCTCCCGTTCTGCGAATCCCTTCACCAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: DEREGAGLRAPAGKN*KSMCSRSANPFTRA Trigger: CGCCCTGGTGAAGGGATTCGCAGAACGGGAGCACATGGATTTCCAGTTCTTCCCAGCGGGCGCACGTAGGCCGGCACCCTCTCTCTCGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS GCA 90 bp | CACTCGAGTTCTGCCCAAAGACGAGAGAGAGGGTGCCGGCCTACGTaGGCCCGCTGGGAAGAACTGGAAATCCATGTGCTCCCGTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: HSSSAQRRERGCRPT*ARWEELEIHVLPFC Trigger: GCAGAACGGGAGCACATGGATTTCCAGTTCTTCCCAGCGGGCGCACGTAGGCCGGCACCCTCTCTCTCGTCTTTGGGCAGAACTCGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS GCA 90 bp | GGGCAGTCACTAAGTGGTGATGTCATGTCACTCATCGGCCTCTTCTaGCTGTGGCCATACAACAGGCCCAGGCCTGTCCCATCCCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GQSLSGDVMSLIGLF*LWPYNRPRPVPSRG Trigger: CCCTCGGGATGGGACAGGCCTGGGCCTGTTGTATGGCCACAGGCAGAAGAGGCCGATGAGTGACATGACATCACCACTTAGTGACTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS CCA 90 bp | TCTGCCCAAAGACGAGAGAGAGGGTGCCGGCCTACGTGCGCCCGCTaGGAAGAACTGGAAATCCATGTGCTCCCGTTCTGCGAATCCCTT | + |
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Preference number: 5 (lower is better) Translates to: SAQRRERGCRPTCAR*EELEIHVLPFCESL Trigger: AAGGGATTCGCAGAACGGGAGCACATGGATTTCCAGTTCTTCCCAGCGGGCGCACGTAGGCCGGCACCCTCTCTCTCGTCTTTGGGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS TCA 90 bp | CGCCCCAGCATCTGGGCTCCCAGGACGAGGGCAGTCACTAAGTGGTaGTGTCATGTCACTCATCGGCCTCTTCTGCCTGTGGCCATACAA | + |
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Preference number: 5 (lower is better) Translates to: RPSIWAPRTRAVTKW*CHVTHRPLLPVAIQ Trigger: TTGTATGGCCACAGGCAGAAGAGGCCGATGAGTGACATGACATCACCACTTAGTGACTGCCCTCGTCCTGGGAGCCCAGATGCTGGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS CCA 90 bp | TCACTAAGTGGTGATGTCATGTCACTCATCGGCCTCTTCTGCCTGTaGCCATACAACAGGCCCAGGCCTGTCCCATCCCGAGGGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SLSGDVMSLIGLFCL*PYNRPRPVPSRGRQ Trigger: CTGCCTCCCTCGGGATGGGACAGGCCTGGGCCTGTTGTATGGCCACAGGCAGAAGAGGCCGATGAGTGACATGACATCACCACTTAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS TCA 90 bp | CAAGAATGCCCGTCCCCATGTCGTGAGCCATGGTCAACGTGCTGCTaGCACGATGGTGGCTGTGGATTTTTCGGATGCAATTGTCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: QECPSPCREPWSTCC*HDGGCGFFGCNCQA Trigger: GGCCTGACAATTGCATCCGAAAAATCCACAGCCACCATCGTGTCAGCAGCACGTTGACCATGGCTCACGACATGGGGACGGGCATTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS TCA 90 bp | TATGAATATTCATACAGCATTCTGCTGGGACCGTCGTTAATATTCTaGGGAAGCGGCAAGAATGCCCGTCCCCATGTCGTGAGCCATGGT | + |
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Preference number: 5 (lower is better) Translates to: YEYSYSILLGPSLIF*GSGKNARPHVVSHG Trigger: ACCATGGCTCACGACATGGGGACGGGCATTCTTGCCGCTTCCTCAGAATATTAACGACGGTCCCAGCAGAATGCTGTATGAATATTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS GCA 72 bp | CCTGGCTGGAGCTGGCGGAGACTTACGGCCACACCCTaGCAAGGTGTGCCCACTGGGACCCGGGCCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PGWSWRRLTATP*QGVPTGTRAQP Trigger: AGGCTGGGCCCGGGTCCCAGTGGGCACACCTTGGCAGGGTGTGGCCGTAAGTCTCCGCCAGCTCCAGCCAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS CCA 72 bp | TGTCCCATCCCGAGGGAGGCAGATCCTGGCTGGAGCTaGCGGAGACTTACGGCCACACCCTGCCAAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: CPIPREADPGWS*RRLTATPCQGV Trigger: CACACCTTGGCAGGGTGTGGCCGTAAGTCTCCGCCAGCTCCAGCCAGGATCTGCCTCCCTCGGGATGGGACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS CCA 72 bp | CAGTTCAGGTCAGAGGAGTCCAGGGACCGCCCTTGCTaGGAGGAAATGGGTGCAGTGCGGCCCAGCGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: QFRSEESRDRPC*EEMGAVRPSAV Trigger: CACTGCGCTGGGCCGCACTGCACCCATTTCCTCCCAGCAAGGGCGGTCCCTGGACTCCTCTGACCTGAACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS GCA 72 bp | GTGAGCGGGGCCAAGGGTCTAGCAGCACTCGAGTTCTaGCCAAAGACGAGAGAGAGGGTGCCGGCCTACGTG | + |
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Preference number: 6 (lower is better) Translates to: VSGAKGLAALEF*PKTRERVPAYV Trigger: CACGTAGGCCGGCACCCTCTCTCTCGTCTTTGGGCAGAACTCGAGTGCTGCTAGACCCTTGGCCCCGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS GCA 72 bp | AAGCAGTTCAGGTCAGAGGAGTCCAGGGACCGCCCTTaGTGGGAGGAAATGGGTGCAGTGCGGCCCAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: KQFRSEESRDRP*WEEMGAVRPSA Trigger: TGCGCTGGGCCGCACTGCACCCATTTCCTCCCAGCAAGGGCGGTCCCTGGACTCCTCTGACCTGAACTGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS GCA 72 bp | CAGCACTCGAGTTCTGCCCAAAGACGAGAGAGAGGGTaGCGGCCTACGTGCGCCCGCTGGGAAGAACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: QHSSSAQRRERG*RPTCARWEELE Trigger: TTCCAGTTCTTCCCAGCGGGCGCACGTAGGCCGGCACCCTCTCTCTCGTCTTTGGGCAGAACTCGAGTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS CCA 72 bp | GAGGGTGCCGGCCTACGTGCGCCCGCTGGGAAGAACTaGAAATCCATGTGCTCCCGTTCTGCGAATCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: EGAGLRAPAGKN*KSMCSRSANPF Trigger: GAAGGGATTCGCAGAACGGGAGCACATGGATTTCCAGTTCTTCCCAGCGGGCGCACGTAGGCCGGCACCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS CCA 72 bp | AGACGAGAGAGAGGGTGCCGGCCTACGTGCGCCCGCTaGGAAGAACTGGAAATCCATGTGCTCCCGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RRERGCRPTCAR*EELEIHVLPFC Trigger: GCAGAACGGGAGCACATGGATTTCCAGTTCTTCCCAGCGGGCGCACGTAGGCCGGCACCCTCTCTCTCGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS GCA 72 bp | CGCTGGGAAGAACTGGAAATCCATGTGCTCCCGTTCTaGGAATCCCTTCACCAGGGCGTCGGCCACCGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RWEELEIHVLPF*ESLHQGVGHRS Trigger: ACTCCGGTGGCCGACGCCCTGGTGAAGGGATTCGCAGAACGGGAGCACATGGATTTCCAGTTCTTCCCAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS GCA 72 bp | CTACGTGCGCCCGCTGGGAAGAACTGGAAATCCATGTaGTCCCGTTCTGCGAATCCCTTCACCAGGGCGTCG | + |
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Preference number: 6 (lower is better) Translates to: LRAPAGKNWKSM*SRSANPFTRAS Trigger: CGACGCCCTGGTGAAGGGATTCGCAGAACGGGAGCACATGGATTTCCAGTTCTTCCCAGCGGGCGCACGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS GCA 72 bp | TCTGCCCAAAGACGAGAGAGAGGGTGCCGGCCTACGTaGGCCCGCTGGGAAGAACTGGAAATCCATGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SAQRRERGCRPT*ARWEELEIHVL Trigger: GAGCACATGGATTTCCAGTTCTTCCCAGCGGGCGCACGTAGGCCGGCACCCTCTCTCTCGTCTTTGGGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS CCA 72 bp | GGTGATGTCATGTCACTCATCGGCCTCTTCTGCCTGTaGCCATACAACAGGCCCAGGCCTGTCCCATCCCGA | + |
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Preference number: 6 (lower is better) Translates to: GDVMSLIGLFCL*PYNRPRPVPSR Trigger: TCGGGATGGGACAGGCCTGGGCCTGTTGTATGGCCACAGGCAGAAGAGGCCGATGAGTGACATGACATCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS CAA 90 bp | AACGTGCTGCTGACACGATGGTGGCTGTGGATTTTTCGGATGCAATaGTCAGGCCTCCAGGCTCAGGAGGGTGGAGGCAGCACCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: NVLLTRWWLWIFRMQ*SGLQAQEGGGSTAI Trigger: GATGGCGGTGCTGCCTCCACCCTCCTGAGCCTGGAGGCCTGACAATTGCATCCGAAAAATCCACAGCCACCATCGTGTCAGCAGCACGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS GCA 72 bp | GGGACCGTCGTTAATATTCTGAGGAAGCGGCAAGAATaGCCGTCCCCATGTCGTGAGCCATGGTCAACGTGC | + |
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Preference number: 6 (lower is better) Translates to: GTVVNILRKRQE*PSPCREPWSTC Trigger: GCACGTTGACCATGGCTCACGACATGGGGACGGGCATTCTTGCCGCTTCCTCAGAATATTAACGACGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS GCA 72 bp | CTAAGTGGTGATGTCATGTCACTCATCGGCCTCTTCTaGCTGTGGCCATACAACAGGCCCAGGCCTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSGDVMSLIGLF*LWPYNRPRPVP Trigger: TGGGACAGGCCTGGGCCTGTTGTATGGCCACAGGCAGAAGAGGCCGATGAGTGACATGACATCACCACTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563018.1 ENST00000566567.1 |
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| CDS TCA 72 bp | CCGTCCCCATGTCGTGAGCCATGGTCAACGTGCTGCTaGCACGATGGTGGCTGTGGATTTTTCGGATGCAAT | + |
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Preference number: 6 (lower is better) Translates to: PSPCREPWSTCC*HDGGCGFFGCN Trigger: ATTGCATCCGAAAAATCCACAGCCACCATCGTGTCAGCAGCACGTTGACCATGGCTCACGACATGGGGACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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| CDS CAA 72 bp | CATACAAATAATTCATGTCAGCATAACGTCATGGTGTaGTCAATAATGAATCCACACTTAAAACCCAGATTG | + |
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Preference number: 6 (lower is better) Translates to: HTNNSCQHNVMV*SIMNPHLKPRL Trigger: CAATCTGGGTTTTAAGTGTGGATTCATTATTGACAACACCATGACGTTATGCTGACATGAATTATTTGTATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566567.1 |
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