Pregenerated sensors for LINC02843 (Homo sapiens)
Ensembl gene IDs: ENSG00000228189Ensembl transcript IDs: ENST00000418343.3, ENST00000544644.2, ENST00000656971.1, ENST00000657084.1, ENST00000657830.1, ENST00000660651.1, ENST00000661837.1, ENST00000663346.1, ENST00000663432.1, ENST00000664638.1, ENST00000668916.1, ENST00000669106.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACAGGGCTATGTGCCCTTGGTCACCAGGGCAAACAGTGCCTCCATaGCAGGCGAAAAGCAAATCATGTGGGACCTCTTGCTTCAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: DRAMCPWSPGQTVPP*QAKSKSCGTSCFSH Trigger: GTGACTGAAGCAAGAGGTCCCACATGATTTGCTTTTCGCCTGGCATGGAGGCACTGTTTGCCCTGGTGACCAAGGGCACATAGCCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CCA 90 bp | ACCAGGGCAAACAGTGCCTCCATGCCAGGCGAAAAGCAAATCATGTaGGACCTCTTGCTTCAGTCACGCGGAGGATTCTCCCTGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TRANSASMPGEKQIM*DLLLQSRGGFSLSR Trigger: TCTGGACAGGGAGAATCCTCCGCGTGACTGAAGCAAGAGGTCCCACATGATTTGCTTTTCGCCTGGCATGGAGGCACTGTTTGCCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS TCA 90 bp | CGAGAGGTTGATTTGCAAAGCTTTTCTCTGGACACATGGAGAAGATaGCACGCTGGCCAGCCACAGGGAAGCATGTCCCGTGTCTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: REVDLQSFSLDTWRR*HAGQPQGSMSRVCH Trigger: GTGGCAGACACGGGACATGCTTCCCTGTGGCTGGCCAGCGTGTCATCTTCTCCATGTGTCCAGAGAAAAGCTTTGCAAATCAACCTCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS GCA 90 bp | ACAGTGCCTCCATGCCAGGCGAAAAGCAAATCATGTGGGACCTCTTaGTTCAGTCACGCGGAGGATTCTCCCTGTCCAGAATGTGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: TVPPCQAKSKSCGTS*FSHAEDSPCPECEP Trigger: AGGCTCACATTCTGGACAGGGAGAATCCTCCGCGTGACTGAAGCAAGAGGTCCCACATGATTTGCTTTTCGCCTGGCATGGAGGCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS GCA 90 bp | AGAGGAAAGACAGGGCTATGTGCCCTTGGTCACCAGGGCAAACAGTaGCTCCATGCCAGGCGAAAAGCAAATCATGTGGGACCTCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: RGKTGLCALGHQGKQ*LHARRKANHVGPLA Trigger: AGCAAGAGGTCCCACATGATTTGCTTTTCGCCTGGCATGGAGGCACTGTTTGCCCTGGTGACCAAGGGCACATAGCCCTGTCTTTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS GCA 90 bp | GAAAAGGGGGAAGGCTACAGGACTGCAAGAGGTTTGCTCGCTTGCTaGTGTGTCTGTCTCAACACAGCACCCAAGCCAGGACAGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: EKGEGYRTARGLLAC*CVCLNTAPKPGQKK Trigger: CTTCTTCTGTCCTGGCTTGGGTGCTGTGTTGAGACAGACACAGCAGCAAGCGAGCAAACCTCTTGCAGTCCTGTAGCCTTCCCCCTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS GCA 90 bp | GAAGAAAAGGGGGAAGGCTACAGGACTGCAAGAGGTTTGCTCGCTTaGTGCTGTGTCTGTCTCAACACAGCACCCAAGCCAGGACAGAAG | + |
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Preference number: 5 (lower is better) Translates to: EEKGEGYRTARGLLA*CCVCLNTAPKPGQK Trigger: CTTCTGTCCTGGCTTGGGTGCTGTGTTGAGACAGACACAGCAGCAAGCGAGCAAACCTCTTGCAGTCCTGTAGCCTTCCCCCTTTTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS GCA 90 bp | GGATGGGACAGACAGAGAAGAAGAAAAGGGGGAAGGCTACAGGACTaGAAGAGGTTTGCTCGCTTGCTGCTGTGTCTGTCTCAACACAGC | + |
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Preference number: 5 (lower is better) Translates to: GWDRQRRRKGGRLQD*KRFARLLLCLSQHS Trigger: GCTGTGTTGAGACAGACACAGCAGCAAGCGAGCAAACCTCTTGCAGTCCTGTAGCCTTCCCCCTTTTCTTCTTCTCTGTCTGTCCCATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CCA 90 bp | GTGCCGTCATCATTCATCGAGAGGTTGATTTGCAAAGCTTTTCTCTaGACACATGGAGAAGATGACACGCTGGCCAGCCACAGGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: VPSSFIERLICKAFL*THGEDDTLASHREA Trigger: TGCTTCCCTGTGGCTGGCCAGCGTGTCATCTTCTCCATGTGTCCAGAGAAAAGCTTTGCAAATCAACCTCTCGATGAATGATGACGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS TCA 90 bp | TATATGCCATCCAGGGATTTGACCTCATGTAGGGGTGGGAGCTGGTaGTGGCAGTCGCCTTCATATTTGGTGCTGGAACTTGAAGGTATC | + |
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Preference number: 5 (lower is better) Translates to: YMPSRDLTSCRGGSW*WQSPSYLVLELEGI Trigger: GATACCTTCAAGTTCCAGCACCAAATATGAAGGCGACTGCCATCACCAGCTCCCACCCCTACATGAGGTCAAATCCCTGGATGGCATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 |
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| CDS GCA 90 bp | CCCCTGATTTCACTGGTGCCGTCATCATTCATCGAGAGGTTGATTTaGAAAGCTTTTCTCTGGACACATGGAGAAGATGACACGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: PLISLVPSSFIERLI*KAFLWTHGEDDTLA Trigger: GGCCAGCGTGTCATCTTCTCCATGTGTCCAGAGAAAAGCTTTGCAAATCAACCTCTCGATGAATGATGACGGCACCAGTGAAATCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS TCA 90 bp | AGAGGGTGCAGCTGTCACCTGCTCACCCGATTTTCCTTTATAGTTTaGATCCTGGCTGAGTCCCAAGAAGGACCCTGTTATACAACTAGC | + |
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Preference number: 5 (lower is better) Translates to: RGCSCHLLTRFSFIV*ILAESQEGPCYTTS Trigger: GCTAGTTGTATAACAGGGTCCTTCTTGGGACTCAGCCAGGATTCAAACTATAAAGGAAAATCGGGTGAGCAGGTGACAGCTGCACCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544644.2 |
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| CDS TCA 90 bp | GAGCTGAGCACCGCTACATCCTGGTGCGTTGTTGAGAGAAAGCTGTaGTCAGATCTTGAGAACCTCATCACAGCATGCTTGTCATTTTCA | + |
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Preference number: 5 (lower is better) Translates to: ELSTATSWCVVERKL*SDLENLITACLSFS Trigger: TGAAAATGACAAGCATGCTGTGATGAGGTTCTCAAGATCTGATCACAGCTTTCTCTCAACAACGCACCAGGATGTAGCGGTGCTCAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS GCA 90 bp | AGCTGTGCCCCAAGGGCAAGAGAACACAACCCTTATGTTCCCTTATaGTTTTGCAAGCTTAGATTCCTGGTGTCTCTAGTCTGTGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: SCAPRAREHNPYVPL*FCKLRFLVSLVCGY Trigger: ATACCCACAGACTAGAGACACCAGGAATCTAAGCTTGCAAAAGCATAAGGGAACATAAGGGTTGTGTTCTCTTGCCCTTGGGGCACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657830.1 ENST00000669106.1 |
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| CDS TCA 90 bp | CCTGTGCTCATAGGTCATCCTCATACTTTTCCCTTCTATATTCATTaGGCTCTGTCATTTGAGAAGCCTTTAGAGGGTGCAGCTGTCACC | + |
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Preference number: 5 (lower is better) Translates to: PVLIGHPHTFPFYIH*ALSFEKPLEGAAVT Trigger: GGTGACAGCTGCACCCTCTAAAGGCTTCTCAAATGACAGAGCTCAATGAATATAGAAGGGAAAAGTATGAGGATGACCTATGAGCACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS TCA 90 bp | CCCTGTCCAGAATGTGAGCCTGCAGTAGATGTGGACCATAGGGAATaGGCATCTACTGAAGGTCAAGCAAATTTATACAACTGGAGCATT | + |
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Preference number: 5 (lower is better) Translates to: PCPECEPAVDVDHRE*ASTEGQANLYNWSI Trigger: AATGCTCCAGTTGTATAAATTTGCTTGACCTTCAGTAGATGCTCATTCCCTATGGTCCACATCTACTGCAGGCTCACATTCTGGACAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS TCA 90 bp | CCTGTGCTCATAGGTCATCCTCATACTTTTCCCTTCTATATTCATTaGGCTCTGTCATTTGAGAAGCCTTTAGAGGGTGCAGCTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: PVLIGHPHTFPFYIH*ALSFEKPLEGAAVT Trigger: TGTGACAGCTGCACCCTCTAAAGGCTTCTCAAATGACAGAGCTCAATGAATATAGAAGGGAAAAGTATGAGGATGACCTATGAGCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660651.1 |
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| CDS TCA 90 bp | ACAATCTCAGAAGCCCAAGTGTGGAAAGGCGTGATAATATCACAATaGGGAGGAGGAGGAGGTCATTGTATCTTTCAATATAACTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: TISEAQVWKGVIISQ*GGGGGHCIFQYNCV Trigger: GACACAGTTATATTGAAAGATACAATGACCTCCTCCTCCTCCTCATTGTGATATTATCACGCCTTTCCACACTTGGGCTTCTGAGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656971.1 |
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| CDS CCA 90 bp | TTTCCACATCACAATCCACCCAGCACGAGCACTGCTCAATGTTCCTaGACAAGAAGGTATCATCTCACAAAATTATTCATGCAAATAGAA | + |
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Preference number: 5 (lower is better) Translates to: FPHHNPPSTSTAQCS*TRRYHLTKLFMQIE Trigger: TTCTATTTGCATGAATAATTTTGTGAGATGATACCTTCTTGTCCAGGAACATTGAGCAGTGCTCGTGCTGGGTGGATTGTGATGTGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000418343.3 ENST00000656971.1 ENST00000657830.1 ENST00000661837.1 ENST00000663346.1 |
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| CDS CCA 72 bp | AATGGCCGCCAGAGGAAAGACAGGGCTATGTGCCCTTaGTCACCAGGGCAAACAGTGCCTCCATGCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: NGRQRKDRAMCP*SPGQTVPPCQA Trigger: CGCCTGGCATGGAGGCACTGTTTGCCCTGGTGACCAAGGGCACATAGCCCTGTCTTTCCTCTGGCGGCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CAA 72 bp | GGGGGAAGGCTACAGGACTGCAAGAGGTTTGCTCGCTaGCTGCTGTGTCTGTCTCAACACAGCACCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: GGRLQDCKRFAR*LLCLSQHSTQA Trigger: GGCTTGGGTGCTGTGTTGAGACAGACACAGCAGCAAGCGAGCAAACCTCTTGCAGTCCTGTAGCCTTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS GCA 72 bp | ATGTGCCCTTGGTCACCAGGGCAAACAGTGCCTCCATaGCAGGCGAAAAGCAAATCATGTGGGACCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: MCPWSPGQTVPP*QAKSKSCGTSC Trigger: GCAAGAGGTCCCACATGATTTGCTTTTCGCCTGGCATGGAGGCACTGTTTGCCCTGGTGACCAAGGGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS GCA 72 bp | ACAGGGCTATGTGCCCTTGGTCACCAGGGCAAACAGTaGCTCCATGCCAGGCGAAAAGCAAATCATGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: TGLCALGHQGKQ*LHARRKANHVG Trigger: TCCCACATGATTTGCTTTTCGCCTGGCATGGAGGCACTGTTTGCCCTGGTGACCAAGGGCACATAGCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CAA 90 bp | AAGGTCCACCAGATGCCTGCCTGCATAATACAGAAGGTCTCTCCTTaGCTAATGCCTGCCCACCGCAGAGACTGTCCACCCTGTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: KVHQMPACIIQKVSP*LMPAHRRDCPPCAH Trigger: ATGAGCACAGGGTGGACAGTCTCTGCGGTGGGCAGGCATTAGCAAAGGAGAGACCTTCTGTATTATGCAGGCAGGCATCTGGTGGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663346.1 ENST00000668916.1 |
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| CDS GCA 72 bp | CCATGCCAGGCGAAAAGCAAATCATGTGGGACCTCTTaGTTCAGTCACGCGGAGGATTCTCCCTGTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: PCQAKSKSCGTS*FSHAEDSPCPE Trigger: TTCTGGACAGGGAGAATCCTCCGCGTGACTGAAGCAAGAGGTCCCACATGATTTGCTTTTCGCCTGGCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CCA 72 bp | AACAGTGCCTCCATGCCAGGCGAAAAGCAAATCATGTaGGACCTCTTGCTTCAGTCACGCGGAGGATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: NSASMPGEKQIM*DLLLQSRGGFS Trigger: GGAGAATCCTCCGCGTGACTGAAGCAAGAGGTCCCACATGATTTGCTTTTCGCCTGGCATGGAGGCACTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CAA 72 bp | TCCATGCCAGGCGAAAAGCAAATCATGTGGGACCTCTaGCTTCAGTCACGCGGAGGATTCTCCCTGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SMPGEKQIMWDL*LQSRGGFSLSR Trigger: TCTGGACAGGGAGAATCCTCCGCGTGACTGAAGCAAGAGGTCCCACATGATTTGCTTTTCGCCTGGCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS TCA 72 bp | TCCAGGGATTTGACCTCATGTAGGGGTGGGAGCTGGTaGTGGCAGTCGCCTTCATATTTGGTGCTGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: SRDLTSCRGGSW*WQSPSYLVLEL Trigger: AAGTTCCAGCACCAAATATGAAGGCGACTGCCATCACCAGCTCCCACCCCTACATGAGGTCAAATCCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 |
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| CDS GCA 72 bp | AAGAAAAGGGGGAAGGCTACAGGACTGCAAGAGGTTTaGTCGCTTGCTGCTGTGTCTGTCTCAACACAGCAC | + |
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Preference number: 6 (lower is better) Translates to: KKRGKATGLQEV*SLAAVSVSTQH Trigger: GTGCTGTGTTGAGACAGACACAGCAGCAAGCGAGCAAACCTCTTGCAGTCCTGTAGCCTTCCCCCTTTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CAA 90 bp | AGCCTCTGGAAAATTCCACTCTGCATAATACAGAAGGTCTCTCCTTaGCTAATGCCTGCCCACCGCAGAGACTGTCCACCCTGTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SLWKIPLCIIQKVSP*LMPAHRRDCPPCAH Trigger: ATGAGCACAGGGTGGACAGTCTCTGCGGTGGGCAGGCATTAGCAAAGGAGAGACCTTCTGTATTATGCAGAGTGGAATTTTCCAGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000663432.1 |
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| CDS CAA 90 bp | GGTCCTCAAAGGTCCAATTTCTGCATAATACAGAAGGTCTCTCCTTaGCTAATGCCTGCCCACCGCAGAGACTGTCCACCCTGTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GPQRSNFCIIQKVSP*LMPAHRRDCPPCAH Trigger: ATGAGCACAGGGTGGACAGTCTCTGCGGTGGGCAGGCATTAGCAAAGGAGAGACCTTCTGTATTATGCAGAAATTGGACCTTTGAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661837.1 |
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| CDS TCA 72 bp | AGAGGGTGCAGCTGTCACATGATTTTCTGCCTCCCCTaGTTTCACTGGTGCCGTCATCATTCATCGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RGCSCHMIFCLP*FHWCRHHSSRG Trigger: ACCTCTCGATGAATGATGACGGCACCAGTGAAATCAGGGGAGGCAGAAAATCATGTGACAGCTGCACCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660651.1 |
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| CDS GCA 72 bp | CACGCTGGCCAGCCACAGGGAAGCATGTCCCGTGTCTaGCACTCATATAAGCTCTTCAATATATTGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HAGQPQGSMSRV*HSYKLFNILSL Trigger: CAGAGACAATATATTGAAGAGCTTATATGAGTGGCAGACACGGGACATGCTTCCCTGTGGCTGGCCAGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS GCA 72 bp | GTGGGAGCTGGTGATGGCAGTCGCCTTCATATTTGGTaGTGGAACTTGAAGGTATCCACAGAAAGGGTACCT | + |
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Preference number: 6 (lower is better) Translates to: VGAGDGSRLHIW*WNLKVSTERVP Trigger: AGGTACCCTTTCTGTGGATACCTTCAAGTTCCAGCACCAAATATGAAGGCGACTGCCATCACCAGCTCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 |
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| CDS GCA 72 bp | AGACAGAGAAGAAGAAAAGGGGGAAGGCTACAGGACTaGAAGAGGTTTGCTCGCTTGCTGCTGTGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RQRRRKGGRLQD*KRFARLLLCLS Trigger: AGACAGACACAGCAGCAAGCGAGCAAACCTCTTGCAGTCCTGTAGCCTTCCCCCTTTTCTTCTTCTCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CAA 90 bp | CTGGAAAATTCCACTCTAGACTGCATAATACAGAAGGTCTCTCCTTaGCTAATGCCTGCCCACCGCAGAGACTGTCCACCCTGTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LENSTLDCIIQKVSP*LMPAHRRDCPPCAH Trigger: ATGAGCACAGGGTGGACAGTCTCTGCGGTGGGCAGGCATTAGCAAAGGAGAGACCTTCTGTATTATGCAGTCTAGAGTGGAATTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000418343.3 ENST00000660651.1 ENST00000664638.1 |
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| CDS CAA 90 bp | TCTTTGGTTCTTGCACATACCTGCATAATACAGAAGGTCTCTCCTTaGCTAATGCCTGCCCACCGCAGAGACTGTCCACCCTGTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SLVLAHTCIIQKVSP*LMPAHRRDCPPCAH Trigger: ATGAGCACAGGGTGGACAGTCTCTGCGGTGGGCAGGCATTAGCAAAGGAGAGACCTTCTGTATTATGCAGGTATGTGCAAGAACCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657830.1 ENST00000669106.1 |
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| CDS GCA 72 bp | AGGGTTTCCACATCACAATCCACCCAGCACGAGCACTaGTCAATGTTCCTGGACAAGAAGGTATCATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: RVSTSQSTQHEH*SMFLDKKVSSH Trigger: GTGAGATGATACCTTCTTGTCCAGGAACATTGAGCAGTGCTCGTGCTGGGTGGATTGTGATGTGGAAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000418343.3 ENST00000656971.1 ENST00000657830.1 ENST00000661837.1 ENST00000663346.1 |
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| CDS CCA 72 bp | TCATTTGAGAAGCCTTTAGAGGGTGCAGCTGTCACCTaGGAGAAAGTTGATGTCAGACGTGACATCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SFEKPLEGAAVT*EKVDVRRDISQ Trigger: CTGGGAGATGTCACGTCTGACATCAACTTTCTCCCAGGTGACAGCTGCACCCTCTAAAGGCTTCTCAAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000418343.3 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000661837.1 ENST00000663346.1 ENST00000664638.1 ENST00000669106.1 |
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| CDS CAA 90 bp | CTGCCTCCCCTGATTTCACTGGTGCCGTCATCATTCATCGAGAGGTaGATTTGCAAAGCTTTTCTCTGGACACATGGAGAAGATGACACG | + |
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Preference number: 6 (lower is better) Translates to: LPPLISLVPSSFIER*ICKAFLWTHGEDDT Trigger: CGTGTCATCTTCTCCATGTGTCCAGAGAAAAGCTTTGCAAATCAACCTCTCGATGAATGATGACGGCACCAGTGAAATCAGGGGAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS TCA 72 bp | GAGCACTGCTCAATGTTCATGATTTTCTGCCTCCCCTaGTTTCACTGGTGCCGTCATCATTCATCGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: EHCSMFMIFCLP*FHWCRHHSSRG Trigger: ACCTCTCGATGAATGATGACGGCACCAGTGAAATCAGGGGAGGCAGAAAATCATGAACATTGAGCAGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657084.1 ENST00000664638.1 ENST00000669106.1 |
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| CDS TCA 72 bp | GAGGGTGCAGCTGTCACCCGATTTTCCTTTATAGTTTaGATCCTGGCTGAGTCCCAAGAAGGACCCTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: EGAAVTRFSFIV*ILAESQEGPCY Trigger: ATAACAGGGTCCTTCTTGGGACTCAGCCAGGATTCAAACTATAAAGGAAAATCGGGTGACAGCTGCACCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663432.1 ENST00000668916.1 |
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| CDS TCA 72 bp | ACCGCTACATCCTGGTGCGTTGTTGAGAGAAAGCTGTaGTCAGATCTTGAGAACCTCATCACAGCATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: TATSWCVVERKL*SDLENLITACL Trigger: CAAGCATGCTGTGATGAGGTTCTCAAGATCTGATCACAGCTTTCTCTCAACAACGCACCAGGATGTAGCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CCA 72 bp | TCATTCATCGAGAGGTTGATTTGCAAAGCTTTTCTCTaGACACATGGAGAAGATGACACGCTGGCCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SFIERLICKAFL*THGEDDTLASH Trigger: GTGGCTGGCCAGCGTGTCATCTTCTCCATGTGTCCAGAGAAAAGCTTTGCAAATCAACCTCTCGATGAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS TCA 72 bp | CTATCCCACCTGCTCACCCGATTTTCCTTTATAGTTTaGATCCTGGCTGAGTCCCAAGAAGGACCCTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: LSHLLTRFSFIV*ILAESQEGPCY Trigger: ATAACAGGGTCCTTCTTGGGACTCAGCCAGGATTCAAACTATAAAGGAAAATCGGGTGAGCAGGTGGGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000418343.3 ENST00000656971.1 ENST00000657830.1 ENST00000661837.1 ENST00000663346.1 |
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| CDS TCA 72 bp | AGCTGTCACCTGCTCACCCGATTTTCCTTTATAGTTTaGATCCTGGCTGAGTCCCAAGAAGGACCCTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: SCHLLTRFSFIV*ILAESQEGPCY Trigger: ATAACAGGGTCCTTCTTGGGACTCAGCCAGGATTCAAACTATAAAGGAAAATCGGGTGAGCAGGTGACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544644.2 |
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| CDS GCA 72 bp | GTTGGATTAAGCACCATGCTTTTCACTGCTATTCCTTaGTGTCTTCCTGCTCTGAGTTTATCCCTCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VGLSTMLFTAIP*CLPALSLSLCA Trigger: GGCACAGAGGGATAAACTCAGAGCAGGAAGACAGCAAGGAATAGCAGTGAAAAGCATGGTGCTTAATCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS CCA 72 bp | GGGTACCTTAATAGAAGGCAGCTGGATTCTCATAGTTaGCTCTGTACTCAATCTGTCGTGACGTCACTCATC | + |
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Preference number: 6 (lower is better) Translates to: GYLNRRQLDSHS*LCTQSVVTSLI Trigger: GATGAGTGACGTCACGACAGATTGAGTACAGAGCCAACTATGAGAATCCAGCTGCCTTCTATTAAGGTACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 |
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| CDS TCA 72 bp | GTGATGGCAGTCGCCTTCATATTTGGTGCTGGAACTTaGAGGTATCCACAGAAAGGGTACCTTAATAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VMAVAFIFGAGT*RYPQKGYLNRR Trigger: CCTTCTATTAAGGTACCCTTTCTGTGGATACCTTCAAGTTCCAGCACCAAATATGAAGGCGACTGCCATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 |
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| CDS TCA 72 bp | CACTTTTTCAGACCAGTGAGGAATGGTTTGGGCTTTTaGATCACAATCCAAGAAGAAGGTCCACCAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: HFFRPVRNGLGF*ITIQEEGPPDA Trigger: GGCATCTGGTGGACCTTCTTCTTGGATTGTGATTCAAAAGCCCAAACCATTCCTCACTGGTCTGAAAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000663346.1 ENST00000668916.1 |
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| CDS CCA 72 bp | GGTATCCACAGAAAGGGTACCTTAATAGAAGGCAGCTaGATTCTCATAGTTGGCTCTGTACTCAATCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: GIHRKGTLIEGS*ILIVGSVLNLS Trigger: CGACAGATTGAGTACAGAGCCAACTATGAGAATCCAGCTGCCTTCTATTAAGGTACCCTTTCTGTGGATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 |
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| CDS TCA 72 bp | AACCAGCACGCATTAGAGCTAATGACATTCTGTAACTaGGAATCAGGCAGTCCCCTTATTGAGGGAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: NQHALELMTFCN*ESGSPLIEGKS Trigger: AGACTTTCCCTCAATAAGGGGACTGCCTGATTCTCAGTTACAGAATGTCATTAGCTCTAATGCGTGCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CCA 72 bp | CACAATCCACCCAGCACGAGCACTGCTCAATGTTCCTaGACAAGAAGGTATCATCTCACAAAATTATTCATG | + |
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Preference number: 6 (lower is better) Translates to: HNPPSTSTAQCS*TRRYHLTKLFM Trigger: CATGAATAATTTTGTGAGATGATACCTTCTTGTCCAGGAACATTGAGCAGTGCTCGTGCTGGGTGGATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000418343.3 ENST00000656971.1 ENST00000657830.1 ENST00000661837.1 ENST00000663346.1 |
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| CDS CAA 72 bp | CCTGGTGCGTTGTTGAGAGAAAGCTGTGATCAGATCTaGAGAACCTCATCACAGCATGCTTGTCATTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PGALLRESCDQI*RTSSQHACHFQ Trigger: TTGAAAATGACAAGCATGCTGTGATGAGGTTCTCAAGATCTGATCACAGCTTTCTCTCAACAACGCACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS TCA 72 bp | ATGTGCCTTGCATATTCTACAGTTCTCAGTGTATGGTaGGACAGATCCTGCTTTCAGTTCATCCTTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: MCLAYSTVLSVW*DRSCFQFILGE Trigger: TTCACCAAGGATGAACTGAAAGCAGGATCTGTCTCACCATACACTGAGAACTGTAGAATATGCAAGGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS TCA 72 bp | GAAGCCCAAGTGTGGAAAGGCGTGATAATATCACAATaGGGAGGAGGAGGAGGTCATTGTATCTTTCAATAT | + |
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Preference number: 6 (lower is better) Translates to: EAQVWKGVIISQ*GGGGGHCIFQY Trigger: ATATTGAAAGATACAATGACCTCCTCCTCCTCCTCATTGTGATATTATCACGCCTTTCCACACTTGGGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656971.1 |
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| CDS TCA 72 bp | GAATGTGAGCCTGCAGTAGATGTGGACCATAGGGAATaGGCATCTACTGAAGGTCAAGCAAATTTATACAAC | + |
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Preference number: 6 (lower is better) Translates to: ECEPAVDVDHRE*ASTEGQANLYN Trigger: GTTGTATAAATTTGCTTGACCTTCAGTAGATGCTCATTCCCTATGGTCCACATCTACTGCAGGCTCACATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS TCA 72 bp | ATTATAAACCAAACTAACATGATTTTCTGCCTCCCCTaGTTTCACTGGTGCCGTCATCATTCATCGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: IINQTNMIFCLP*FHWCRHHSSRG Trigger: ACCTCTCGATGAATGATGACGGCACCAGTGAAATCAGGGGAGGCAGAAAATCATGTTAGTTTGGTTTATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657830.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000668916.1 |
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| CDS CCA 72 bp | AAGGTCAAGCAAATTTATACAACTGGAGCATTTTATTaGGAAATCACTGGGGCTCTTCGATCTGCATCATGG | + |
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Preference number: 6 (lower is better) Translates to: KVKQIYTTGAFY*EITGALRSASW Trigger: CCATGATGCAGATCGAAGAGCCCCAGTGATTTCCCAATAAAATGCTCCAGTTGTATAAATTTGCTTGACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS CAA 72 bp | GAAGGTCAAGCAAATTTATACAACTGGAGCATTTTATaGGGAAATCACTGGGGCTCTTCGATCTGCATCATG | + |
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Preference number: 6 (lower is better) Translates to: EGQANLYNWSIL*GNHWGSSICIM Trigger: CATGATGCAGATCGAAGAGCCCCAGTGATTTCCCAATAAAATGCTCCAGTTGTATAAATTTGCTTGACCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS TCA 72 bp | ATAGGTCATCCTCATACTTTTCCCTTCTATATTCATTaGGCTCTGTCATTTGAGAAGCCTTTAGAGGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: IGHPHTFPFYIH*ALSFEKPLEGA Trigger: TGCACCCTCTAAAGGCTTCTCAAATGACAGAGCTCAATGAATATAGAAGGGAAAAGTATGAGGATGACCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000418343.3 ENST00000544644.2 ENST00000656971.1 ENST00000657084.1 ENST00000657830.1 ENST00000660651.1 ENST00000661837.1 ENST00000663346.1 ENST00000663432.1 ENST00000664638.1 ENST00000668916.1 ENST00000669106.1 |
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| CDS CAA 90 bp | GCATCTACTGAAGGTCAAGCAAATTTATACAACTGGAGCATTTTATaGGGAAATCACTGGGGCTCTTCGATCTGCATCATGGTTAAATTA | + |
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Preference number: 6 (lower is better) Translates to: ASTEGQANLYNWSIL*GNHWGSSICIMVKL Trigger: TAATTTAACCATGATGCAGATCGAAGAGCCCCAGTGATTTCCCAATAAAATGCTCCAGTTGTATAAATTTGCTTGACCTTCAGTAGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS TCA 72 bp | TTCCACTTGGCCATTTATATATCTTCTTTGGAGTGTTaGCTATTCAAGTCCTTTGACAATTCTTTGATTGGG | + |
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Preference number: 6 (lower is better) Translates to: FHLAIYISSLEC*LFKSFDNSLIG Trigger: CCCAATCAAAGAATTGTCAAAGGACTTGAATAGTCAACACTCCAAAGAAGATATATAAATGGCCAAGTGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661837.1 |
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| CDS CCA 72 bp | AATTTATACAACTGGAGCATTTTATTGGGAAATCACTaGGGCTCTTCGATCTGCATCATGGTTAAATTAGTA | + |
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Preference number: 6 (lower is better) Translates to: NLYNWSILLGNH*GSSICIMVKLV Trigger: TACTAATTTAACCATGATGCAGATCGAAGAGCCCCAGTGATTTCCCAATAAAATGCTCCAGTTGTATAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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| CDS TCA 72 bp | AAAAAGAGAGAGAGAGAGAGACATGTTAGGAGGTCTTaGTTAATACAAAGTTATCTCAGAACAGAGTATGAA | + |
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Preference number: 6 (lower is better) Translates to: KKRERERHVRRS*LIQSYLRTEYE Trigger: TTCATACTCTGTTCTGAGATAACTTTGTATTAATCAAGACCTCCTAACATGTCTCTCTCTCTCTCTCTTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657830.1 |
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