Pregenerated sensors for LINC02840 (Homo sapiens)
Ensembl gene IDs: ENSG00000224893Ensembl transcript IDs: ENST00000417654.1, ENST00000652681.1, ENST00000654424.1, ENST00000656248.1, ENST00000657202.1, ENST00000658966.1, ENST00000659837.1, ENST00000663653.1, ENST00000666093.1, ENST00000667732.1, ENST00000670414.1, ENST00000670640.1, ENST00000671138.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | CAGACCTGGCCGTGTATTGGTGGTGGGGAGGCAACTCTGGTGCCATaGAGGCTTCATCTAGAGACCCCAGTCCTACTCCGGCACAAACTC | + |
Preference number: 5 (lower is better) Translates to: QTWPCIGGGEATLVP*RLHLETPVLLRHKL Trigger: GAGTTTGTGCCGGAGTAGGACTGGGGTCTCTAGATGAAGCCTGCATGGCACCAGAGTTGCCTCCCCACCACCAATACACGGCCAGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS GCA 90 bp | TCCTCTAGAAGCTGCTCTCTTGGTATGTCCCAGGACATGATCCCCTaGCACAGGCCCTTCCAGCTCATCCCTCATCTCCAATGGTGTGGC | + |
Preference number: 5 (lower is better) Translates to: SSRSCSLGMSQDMIP*HRPFQLIPHLQWCG Trigger: GCCACACCATTGGAGATGAGGGATGAGCTGGAAGGGCCTGTGGCAGGGGATCATGTCCTGGGACATACCAAGAGAGCAGCTTCTAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000656248.1 |
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CDS GCA 90 bp | TCCTCTAGAAGCTGCTCTCTTGGTATGTCCCAGGACATGATCCCCTaGCACAGGACCCCTTCCAGCTCATCCCTCATCTCCAATGGTGTG | + |
Preference number: 5 (lower is better) Translates to: SSRSCSLGMSQDMIP*HRTPSSSSLISNGV Trigger: CACACCATTGGAGATGAGGGATGAGCTGGAAGGGGTCCTGTGGCAGGGGATCATGTCCTGGGACATACCAAGAGAGCAGCTTCTAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000657202.1 ENST00000659837.1 ENST00000666093.1 ENST00000670640.1 |
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CDS GCA 90 bp | GATTTGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGATGATGTaGGGGCCGCAGATGGGAACTGGATACACAGTGGATTTGCAGCAT | + |
Preference number: 5 (lower is better) Translates to: DLRGILLLSSPMGMM*GPQMGTGYTVDLQH Trigger: ATGCTGCAAATCCACTGTGTATCCAGTTCCCATCTGCGGCCCGCACATCATCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000652681.1 ENST00000654424.1 ENST00000656248.1 ENST00000658966.1 ENST00000663653.1 ENST00000666093.1 ENST00000667732.1 ENST00000670414.1 ENST00000670640.1 ENST00000671138.1 |
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CDS CCA 90 bp | CTGGCACACCCAGCAATGATGCACAGGGATGCCCAGAGCCCTTCGTaGATTGCTGCTCCAAACGCTTACCCTTCCCATTTTGTGATACTC | + |
Preference number: 5 (lower is better) Translates to: LAHPAMMHRDAQSPS*IAAPNAYPSHFVIL Trigger: GAGTATCACAAAATGGGAAGGGTAAGCGTTTGGAGCAGCAATCCACGAAGGGCTCTGGGCATCCCTGTGCATCATTGCTGGGTGTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS TCA 90 bp | ATAATCAGTCCTCTAGAAGCTGCTCTCTTGGTATGTCCCAGGACATaGTCCCCTGCCACAGGCCCTTCCAGCTCATCCCTCATCTCCAAT | + |
Preference number: 5 (lower is better) Translates to: IISPLEAALLVCPRT*SPATGPSSSSLISN Trigger: ATTGGAGATGAGGGATGAGCTGGAAGGGCCTGTGGCAGGGGATCATGTCCTGGGACATACCAAGAGAGCAGCTTCTAGAGGACTGATTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000656248.1 |
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CDS GCA 90 bp | CTTTTCACATTCCAGTTCCTCTCTGATAATCAGTCCTCTAGAAGCTaGTCTCTTGGTATGTCCCAGGACATGATCCCCTGCCACAGGCCC | + |
Preference number: 5 (lower is better) Translates to: LFTFQFLSDNQSSRS*SLGMSQDMIPCHRP Trigger: GGGCCTGTGGCAGGGGATCATGTCCTGGGACATACCAAGAGAGCAGCTTCTAGAGGACTGATTATCAGAGAGGAACTGGAATGTGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000656248.1 |
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CDS GCA 90 bp | CTTTTCACATTCCAGTTCCTCTCTGATAATCAGTCCTCTAGAAGCTaGTCTCTTGGTATGTCCCAGGACATGATCCCCTGCCACAGGACC | + |
Preference number: 5 (lower is better) Translates to: LFTFQFLSDNQSSRS*SLGMSQDMIPCHRT Trigger: GGTCCTGTGGCAGGGGATCATGTCCTGGGACATACCAAGAGAGCAGCTTCTAGAGGACTGATTATCAGAGAGGAACTGGAATGTGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000657202.1 ENST00000659837.1 ENST00000666093.1 ENST00000670640.1 |
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CDS CCA 90 bp | AGGGAAACTAAAGAATCTTCAGGTTTTACAGACCTGGCCGTGTATTaGTGGTGGGGAGGCAACTCTGGTGCCATGCAGGCTTCATCTAGA | + |
Preference number: 5 (lower is better) Translates to: RETKESSGFTDLAVY*WWGGNSGAMQASSR Trigger: TCTAGATGAAGCCTGCATGGCACCAGAGTTGCCTCCCCACCACCAATACACGGCCAGGTCTGTAAAACCTGAAGATTCTTTAGTTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS GCA 90 bp | AGGCATGGGGTTACCTCCATCTTCTTCCTGGCACAACAGAGCAACTaGCCCTTTTGCCATGCTCTTATGAATGCTTCAGGCAAATGTGAT | + |
Preference number: 5 (lower is better) Translates to: RHGVTSIFFLAQQSN*PFCHALMNASGKCD Trigger: ATCACATTTGCCTGAAGCATTCATAAGAGCATGGCAAAAGGGGCAGTTGCTCTGTTGTGCCAGGAAGAAGATGGAGGTAACCCCATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS CCA 90 bp | CACTGCGCCCAGCGTATATGCCTTTGTTACAGTGTCTATGTTACCTaGCACTGTGTGAATTATAGGGCATCTGCCCAACCAAGTCTCGAT | + |
Preference number: 5 (lower is better) Translates to: HCAQRICLCYSVYVT*HCVNYRASAQPSLD Trigger: ATCGAGACTTGGTTGGGCAGATGCCCTATAATTCACACAGTGCCAGGTAACATAGACACTGTAACAAAGGCATATACGCTGGGCGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS GCA 90 bp | GTTACCTCCATCTTCTTCCTGGCACAACAGAGCAACTGCCCCTTTTaGCATGCTCTTATGAATGCTTCAGGCAAATGTGATTCCCAGGAA | + |
Preference number: 5 (lower is better) Translates to: VTSIFFLAQQSNCPF*HALMNASGKCDSQE Trigger: TTCCTGGGAATCACATTTGCCTGAAGCATTCATAAGAGCATGGCAAAAGGGGCAGTTGCTCTGTTGTGCCAGGAAGAAGATGGAGGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS CCA 90 bp | CTCATTCATGGGCCTTTATCTTACTTTGTCTACTTATCTCCTGGGTaGGGACCTTGTCTCCTGCCCTCTCCCCTAAACTCATGTTTCTTC | + |
Preference number: 5 (lower is better) Translates to: LIHGPLSYFVYLSPG*GPCLLPSPLNSCFF Trigger: GAAGAAACATGAGTTTAGGGGAGAGGGCAGGAGACAAGGTCCCCACCCAGGAGATAAGTAGACAAAGTAAGATAAAGGCCCATGAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CCA 90 bp | CCCAGAGCAAACGCAGATGAAAACAGATGTCACATCAGCAAGCACTaGTCAGAGTCGTTTGTGTCTGGACTTCAGATGCTAGAAACAGCA | + |
Preference number: 5 (lower is better) Translates to: PRANADENRCHISKH*SESFVSGLQMLETA Trigger: TGCTGTTTCTAGCATCTGAAGTCCAGACACAAACGACTCTGACCAGTGCTTGCTGATGTGACATCTGTTTTCATCTGCGTTTGCTCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS TCA 90 bp | TCTTCCTGGCACAACAGAGCAACTGCCCCTTTTGCCATGCTCTTATaGATGCTTCAGGCAAATGTGATTCCCAGGAATCTTCAGGTGAAA | + |
Preference number: 5 (lower is better) Translates to: SSWHNRATAPFAMLL*MLQANVIPRNLQVK Trigger: TTTCACCTGAAGATTCCTGGGAATCACATTTGCCTGAAGCATTCATAAGAGCATGGCAAAAGGGGCAGTTGCTCTGTTGTGCCAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS CCA 90 bp | AAACAGATGTCACATCAGCAAGCACTGGTCAGAGTCGTTTGTGTCTaGACTTCAGATGCTAGAAACAGCAAACTAGAGGGCTTTGGCCTT | + |
Preference number: 5 (lower is better) Translates to: KQMSHQQALVRVVCV*TSDARNSKLEGFGL Trigger: AAGGCCAAAGCCCTCTAGTTTGCTGTTTCTAGCATCTGAAGTCCAGACACAAACGACTCTGACCAGTGCTTGCTGATGTGACATCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS TCA 90 bp | CTGCACATGGAGACCTCTCTATCTCACTTATCTAGCTATACTACGTaGAGCAGTGATTTTCAACCTTGGCTGACATTAGACTACCCCGCA | + |
Preference number: 5 (lower is better) Translates to: LHMETSLSHLSSYTT*SSDFQPWLTLDYPA Trigger: TGCGGGGTAGTCTAATGTCAGCCAAGGTTGAAAATCACTGCTTCACGTAGTATAGCTAGATAAGTGAGATAGAGAGGTCTCCATGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS CCA 90 bp | AGAACTTTGAAGTTCTCTTCTACAGCTTTGAGAGCTTTGGATAACTaGAATGAAGGCATGGGGTTACCTCCATCTTCTTCCTGGCACAAC | + |
Preference number: 5 (lower is better) Translates to: RTLKFSSTALRALDN*NEGMGLPPSSSWHN Trigger: GTTGTGCCAGGAAGAAGATGGAGGTAACCCCATGCCTTCATTCCAGTTATCCAAAGCTCTCAAAGCTGTAGAAGAGAACTTCAAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS CCA 90 bp | CCAGGCATGCTGATGGAGTTTTCACCAGTGACTTCAGTAAACTCTTaGGTCAACTTTCTGCCAAAAAGTACCTTGAGTCTCTTATGGGAA | + |
Preference number: 5 (lower is better) Translates to: PGMLMEFSPVTSVNS*VNFLPKSTLSLLWE Trigger: TTCCCATAAGAGACTCAAGGTACTTTTTGGCAGAAAGTTGACCCAAGAGTTTACTGAAGTCACTGGTGAAAACTCCATCAGCATGCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS TCA 90 bp | ACCCATGCTCAAACTAAAGGCAATTCATGGCCTTACCTCAGTTCCTaGTGGGGTTATCTAAGGTTTTCAACAGTCATCAAGAGTGGACAT | + |
Preference number: 5 (lower is better) Translates to: THAQTKGNSWPYLSS*WGYLRFSTVIKSGH Trigger: ATGTCCACTCTTGATGACTGTTGAAAACCTTAGATAACCCCATCAGGAACTGAGGTAAGGCCATGAATTGCCTTTAGTTTGAGCATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656248.1 ENST00000657202.1 ENST00000666093.1 ENST00000670640.1 |
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CDS GCA 90 bp | CCTTTCTCATCTGAGAGCCTTAATATGTACAATGTTTTTCTGGTCTaGAGCAGTGAGGGAGAATCTCCCGACTTTCCAGAAGAGTTAGAA | + |
Preference number: 5 (lower is better) Translates to: PFSSESLNMYNVFLV*SSEGESPDFPEELE Trigger: TTCTAACTCTTCTGGAAAGTCGGGAGATTCTCCCTCACTGCTGCAGACCAGAAAAACATTGTACATATTAAGGCTCTCAGATGAGAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS CCA 90 bp | ATGAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGGTaGGTATATTCGTGCATTCCTTCTGTATTCTTATGGCTGTCTCTG | + |
Preference number: 5 (lower is better) Translates to: MKKTFGAKLMTTSQW*VYSCIPSVFLWLSL Trigger: CAGAGACAGCCATAAGAATACAGAAGGAATGCACGAATATACCCACCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS TCA 90 bp | TTCAAACAGACTCCTATGTCCTTTTCACATGGTCCCATCATTCTTTaGGCACGTTCTTACTTTCTGACACAGAAAGCTTCTCCAGGTTCA | + |
Preference number: 5 (lower is better) Translates to: FKQTPMSFSHGPIIL*ARSYFLTQKASPGS Trigger: TGAACCTGGAGAAGCTTTCTGTGTCAGAAAGTAAGAACGTGCTCAAAGAATGATGGGACCATGTGAAAAGGACATAGGAGTCTGTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652681.1 ENST00000658966.1 ENST00000667732.1 |
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CDS GCA 90 bp | CTGACATTTTTATCCTCAGAGTTATCCTATATTTGGCCAGTGGGATaGCTTTCAAACAGACTCCTATGTCCTTTTCACATGGTCCCATCA | + |
Preference number: 5 (lower is better) Translates to: LTFLSSELSYIWPVG*LSNRLLCPFHMVPS Trigger: TGATGGGACCATGTGAAAAGGACATAGGAGTCTGTTTGAAAGGCATCCCACTGGCCAAATATAGGATAACTCTGAGGATAAAAATGTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000652681.1 ENST00000658966.1 ENST00000667732.1 |
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CDS CCA 90 bp | ATGATGAAAAAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTaGTGGGTATATTCGTGCATTCCTTCTGTATTCTTATGGCTGTCT | + |
Preference number: 5 (lower is better) Translates to: MMKKTFGAKLMTTSQ*WVYSCIPSVFLWLS Trigger: AGACAGCCATAAGAATACAGAAGGAATGCACGAATATACCCACCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTTTTTCATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS GCA 90 bp | AACATTCTTAGTGAGACACAGACACATCTCCCTATAACCCACCTATaGCTTAGGCTCATTCATGGGCCTTTATCTTACTTTGTCTACTTA | + |
Preference number: 5 (lower is better) Translates to: NILSETQTHLPITHL*LRLIHGPLSYFVYL Trigger: TAAGTAGACAAAGTAAGATAAAGGCCCATGAATGAGCCTAAGGCATAGGTGGGTTATAGGGAGATGTGTCTGTGTCTCACTAAGAATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CCA 90 bp | GGTTATCTAAGGTTTTCAACAGTCATCAAGAGTGGACATGGTGTCTaGGAAGATACCTGCTTAATTGACTGCTTTTGTCCACTAATTACC | + |
Preference number: 5 (lower is better) Translates to: GYLRFSTVIKSGHGV*EDTCLIDCFCPLIT Trigger: GGTAATTAGTGGACAAAAGCAGTCAATTAAGCAGGTATCTTCCCAGACACCATGTCCACTCTTGATGACTGTTGAAAACCTTAGATAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656248.1 ENST00000657202.1 ENST00000666093.1 ENST00000670640.1 |
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CDS CCA 90 bp | TTTTTCATTCCATGCCCGAGAATTAGCCAGTTCTCCAGGGAGCCCTaGATCTTTTTAGAGACGAAAGGTATTTATAAACAAAGAGCTAAG | + |
Preference number: 5 (lower is better) Translates to: FFIPCPRISQFSREP*IFLETKGIYKQRAK Trigger: CTTAGCTCTTTGTTTATAAATACCTTTCGTCTCTAAAAAGATCCAGGGCTCCCTGGAGAACTGGCTAATTCTCGGGCATGGAATGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000667732.1 |
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CDS TCA 90 bp | AGCGTATATGCCTTTGTTACAGTGTCTATGTTACCTGGCACTGTGTaGATTATAGGGCATCTGCCCAACCAAGTCTCGATAAATTTAATA | + |
Preference number: 5 (lower is better) Translates to: SVYAFVTVSMLPGTV*IIGHLPNQVSINLI Trigger: TATTAAATTTATCGAGACTTGGTTGGGCAGATGCCCTATAATTCACACAGTGCCAGGTAACATAGACACTGTAACAAAGGCATATACGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS GCA 90 bp | TTTCAGACTTGGAATTTGATTTTGGGTTATTTTAACGAGTTAGCCTaGCACGGTTTCATGGATGCTAATAGAAGATACAAGACTTCTGAG | + |
Preference number: 5 (lower is better) Translates to: FQTWNLILGYFNELA*HGFMDANRRYKTSE Trigger: CTCAGAAGTCTTGTATCTTCTATTAGCATCCATGAAACCGTGGCAGGCTAACTCGTTAAAATAACCCAAAATCAAATTCCAAGTCTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667732.1 |
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CDS GCA 90 bp | TTAGATAACTTAAGTGCTTGTATATTACCCCCGGCCAATTGTAAATaGTTGGAAAGGAAGCCTTATCGTATATGCCTTTGTTTATTTGTG | + |
Preference number: 5 (lower is better) Translates to: LDNLSACILPPANCK*LERKPYRICLCLFV Trigger: CACAAATAAACAAAGGCATATACGATAAGGCTTCCTTTCCAAGCATTTACAATTGGCCGGGGGTAATATACAAGCACTTAAGTTATCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CCA 90 bp | TATAATTCTTTACTGACATTTTTATCCTCAGAGTTATCCTATATTTaGCCAGTGGGATGCCTTTCAAACAGACTCCTATGTCCTTTTCAC | + |
Preference number: 5 (lower is better) Translates to: YNSLLTFLSSELSYI*PVGCLSNRLLCPFH Trigger: GTGAAAAGGACATAGGAGTCTGTTTGAAAGGCATCCCACTGGCCAAATATAGGATAACTCTGAGGATAAAAATGTCAGTAAAGAATTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000652681.1 ENST00000658966.1 ENST00000667732.1 |
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CDS TCA 90 bp | TGTCTAGTATTTCTTTCCCATCACATAATGGCATCTTTGAAGCTGTaGTCCCAAATTTTATCTAACGCTGTCTTCTTTTCCTATCAAGAA | + |
Preference number: 5 (lower is better) Translates to: CLVFLSHHIMASLKL*SQILSNAVFFSYQE Trigger: TTCTTGATAGGAAAAGAAGACAGCGTTAGATAAAATTTGGGATCACAGCTTCAAAGATGCCATTATGTGATGGGAAAGAAATACTAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CCA 72 bp | TTGAACAATGAGAACACATGGACACGAGGGTGGGGGTaGCATCACACACCGAGGCCTGTCAGGGAGTGGGGG | + |
Preference number: 6 (lower is better) Translates to: LNNENTWTRGWG*HHTPRPVREWG Trigger: CCCCCACTCCCTGACAGGCCTCGGTGTGTGATGCCACCCCCACCCTCGTGTCCATGTGTTCTCATTGTTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS TCA 72 bp | TGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGATaGTGTGCGGGCCGCAGATGGGAACTGGATACACAG | + |
Preference number: 6 (lower is better) Translates to: CVGSSCSQVPWG*CAGRRWELDTQ Trigger: CTGTGTATCCAGTTCCCATCTGCGGCCCGCACATCATCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000652681.1 ENST00000654424.1 ENST00000656248.1 ENST00000658966.1 ENST00000663653.1 ENST00000666093.1 ENST00000667732.1 ENST00000670414.1 ENST00000670640.1 ENST00000671138.1 |
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CDS TCA 72 bp | CCTCTAGAAGCTGCTCTCTTGGTATGTCCCAGGACATaGTCCCCTGCCACAGGCCCTTCCAGCTCATCCCTC | + |
Preference number: 6 (lower is better) Translates to: PLEAALLVCPRT*SPATGPSSSSL Trigger: GAGGGATGAGCTGGAAGGGCCTGTGGCAGGGGATCATGTCCTGGGACATACCAAGAGAGCAGCTTCTAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000656248.1 |
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CDS GCA 72 bp | AGCTGCTCTCTTGGTATGTCCCAGGACATGATCCCCTaGCACAGGACCCCTTCCAGCTCATCCCTCATCTCC | + |
Preference number: 6 (lower is better) Translates to: SCSLGMSQDMIP*HRTPSSSSLIS Trigger: GGAGATGAGGGATGAGCTGGAAGGGGTCCTGTGGCAGGGGATCATGTCCTGGGACATACCAAGAGAGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000657202.1 ENST00000659837.1 ENST00000666093.1 ENST00000670640.1 |
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CDS CCA 72 bp | TGGGAGTTGAACAATGAGAACACATGGACACGAGGGTaGGGGTGGCATCACACACCGAGGCCTGTCAGGGAG | + |
Preference number: 6 (lower is better) Translates to: WELNNENTWTRG*GWHHTPRPVRE Trigger: CTCCCTGACAGGCCTCGGTGTGTGATGCCACCCCCACCCTCGTGTCCATGTGTTCTCATTGTTCAACTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS GCA 72 bp | GGGATCCTCTTGCTCTCAAGTCCCATGGGGATGATGTaGGGGCCGCAGATGGGAACTGGATACACAGTGGAT | + |
Preference number: 6 (lower is better) Translates to: GILLLSSPMGMM*GPQMGTGYTVD Trigger: ATCCACTGTGTATCCAGTTCCCATCTGCGGCCCGCACATCATCCCCATGGGACTTGAGAGCAAGAGGATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000652681.1 ENST00000654424.1 ENST00000656248.1 ENST00000658966.1 ENST00000663653.1 ENST00000666093.1 ENST00000667732.1 ENST00000670414.1 ENST00000670640.1 ENST00000671138.1 |
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CDS GCA 72 bp | AGCTGCTCTCTTGGTATGTCCCAGGACATGATCCCCTaGCACAGGCCCTTCCAGCTCATCCCTCATCTCCAA | + |
Preference number: 6 (lower is better) Translates to: SCSLGMSQDMIP*HRPFQLIPHLQ Trigger: TTGGAGATGAGGGATGAGCTGGAAGGGCCTGTGGCAGGGGATCATGTCCTGGGACATACCAAGAGAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000656248.1 |
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CDS CAA 72 bp | GAGCATAGCAAGCAACATGATTTGCGTGGGATCCTCTaGCTCTCAAGTCCCATGGGGATGATGTGCGGGCCG | + |
Preference number: 6 (lower is better) Translates to: EHSKQHDLRGIL*LSSPMGMMCGP Trigger: CGGCCCGCACATCATCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000666093.1 |
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CDS CAA 72 bp | CAGCATAGCAAGCAACATGATTTGCGTGGGATCCTCTaGCTCTCAAGTCCCATGGGGATGATGTGCGGGCCG | + |
Preference number: 6 (lower is better) Translates to: QHSKQHDLRGIL*LSSPMGMMCGP Trigger: CGGCCCGCACATCATCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000652681.1 ENST00000656248.1 ENST00000663653.1 ENST00000667732.1 ENST00000670640.1 ENST00000671138.1 |
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CDS GCA 72 bp | GTTCTCCAGGGAGCCAGCATAGCAAGCAACATGATTTaGGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGA | + |
Preference number: 6 (lower is better) Translates to: VLQGASIASNMI*VGSSCSQVPWG Trigger: TCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGGCTCCCTGGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652681.1 |
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CDS GCA 72 bp | CAGGGAGCCCTGGATAGCATAGCAAGCAACATGATTTaGGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGA | + |
Preference number: 6 (lower is better) Translates to: QGALDSIASNMI*VGSSCSQVPWG Trigger: TCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTATCCAGGGCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658966.1 |
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CDS CCA 72 bp | TCTTCAGGTTTTACAGACCTGGCCGTGTATTGGTGGTaGGGAGGCAACTCTGGTGCCATGCAGGCTTCATCT | + |
Preference number: 6 (lower is better) Translates to: SSGFTDLAVYWW*GGNSGAMQASS Trigger: AGATGAAGCCTGCATGGCACCAGAGTTGCCTCCCCACCACCAATACACGGCCAGGTCTGTAAAACCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CAA 72 bp | CATTCCAGGCAGCAGGAGCATAGCAAGCAACATGATTaGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGG | + |
Preference number: 6 (lower is better) Translates to: HSRQQEHSKQHD*RGILLLSSPMG Trigger: CCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTCCTGCTGCCTGGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000666093.1 |
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CDS CAA 72 bp | AGTTCTCCAGGGAGCCAGCATAGCAAGCAACATGATTaGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGG | + |
Preference number: 6 (lower is better) Translates to: SSPGSQHSKQHD*RGILLLSSPMG Trigger: CCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGGCTCCCTGGAGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652681.1 |
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CDS GCA 72 bp | ATTCCAGGCAGCAGGAGCATAGCAAGCAACATGATTTaGGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGA | + |
Preference number: 6 (lower is better) Translates to: IPGSRSIASNMI*VGSSCSQVPWG Trigger: TCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTCCTGCTGCCTGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000666093.1 |
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CDS GCA 72 bp | GATGCACAGGGATGCCCAGAGCCCTTCGTGGATTGCTaGTCCAAACGCTTACCCTTCCCATTTTGTGATACT | + |
Preference number: 6 (lower is better) Translates to: DAQGCPEPFVDC*SKRLPFPFCDT Trigger: AGTATCACAAAATGGGAAGGGTAAGCGTTTGGAGCAGCAATCCACGAAGGGCTCTGGGCATCCCTGTGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CCA 72 bp | AAAGAATCTTCAGGTTTTACAGACCTGGCCGTGTATTaGTGGTGGGGAGGCAACTCTGGTGCCATGCAGGCT | + |
Preference number: 6 (lower is better) Translates to: KESSGFTDLAVY*WWGGNSGAMQA Trigger: AGCCTGCATGGCACCAGAGTTGCCTCCCCACCACCAATACACGGCCAGGTCTGTAAAACCTGAAGATTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CAA 72 bp | GTCCGCATCTCCAAACAGCATAGCAAGCAACATGATTaGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGG | + |
Preference number: 6 (lower is better) Translates to: VRISKQHSKQHD*RGILLLSSPMG Trigger: CCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGTTTGGAGATGCGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656248.1 ENST00000670640.1 |
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CDS CAA 90 bp | GAATTAGCCAGTTCTCCAGGGAGCCAGCATAGCAAGCAACATGATTaGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGATGATGTGC | + |
Preference number: 6 (lower is better) Translates to: ELASSPGSQHSKQHD*RGILLLSSPMGMMC Trigger: GCACATCATCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGGCTCCCTGGAGAACTGGCTAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652681.1 |
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CDS CAA 90 bp | TCACATATGCATTCCAGGCAGCAGGAGCATAGCAAGCAACATGATTaGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGATGATGTGC | + |
Preference number: 6 (lower is better) Translates to: SHMHSRQQEHSKQHD*RGILLLSSPMGMMC Trigger: GCACATCATCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTCCTGCTGCCTGGAATGCATATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000666093.1 |
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CDS TCA 72 bp | CACATATGCATTCCAGGCAGCAGGATGATCACCAGGTaGAATCGCACAGTAGGCCATCTGCAAGCTGAGGAA | + |
Preference number: 6 (lower is better) Translates to: HICIPGSRMITR*NRTVGHLQAEE Trigger: TTCCTCAGCTTGCAGATGGCCTACTGTGCGATTTCACCTGGTGATCATCCTGCTGCCTGGAATGCATATGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656248.1 ENST00000657202.1 ENST00000670640.1 |
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CDS GCA 72 bp | AATGATGCACAGGGATGCCCAGAGCCCTTCGTGGATTaGTGCTCCAAACGCTTACCCTTCCCATTTTGTGAT | + |
Preference number: 6 (lower is better) Translates to: NDAQGCPEPFVD*CSKRLPFPFCD Trigger: ATCACAAAATGGGAAGGGTAAGCGTTTGGAGCAGCAATCCACGAAGGGCTCTGGGCATCCCTGTGCATCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS GCA 72 bp | TCCGCATCTCCAAACAGCATAGCAAGCAACATGATTTaGGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGA | + |
Preference number: 6 (lower is better) Translates to: SASPNSIASNMI*VGSSCSQVPWG Trigger: TCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGTTTGGAGATGCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656248.1 ENST00000670640.1 |
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CDS CAA 90 bp | ACACCAGCCTCTCCTTCATCTATACAGCATAGCAAGCAACATGATTaGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGATGATGTGC | + |
Preference number: 6 (lower is better) Translates to: TPASPSSIQHSKQHD*RGILLLSSPMGMMC Trigger: GCACATCATCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGTATAGATGAAGGAGAGGCTGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS GCA 72 bp | TTCCAGTTCCTCTCTGATAATCAGTCCTCTAGAAGCTaGTCTCTTGGTATGTCCCAGGACATGATCCCCTGC | + |
Preference number: 6 (lower is better) Translates to: FQFLSDNQSSRS*SLGMSQDMIPC Trigger: GCAGGGGATCATGTCCTGGGACATACCAAGAGAGCAGCTTCTAGAGGACTGATTATCAGAGAGGAACTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000654424.1 ENST00000656248.1 ENST00000657202.1 ENST00000659837.1 ENST00000666093.1 ENST00000670640.1 |
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CDS GCA 72 bp | GTTACCTCCATCTTCTTCCTGGCACAACAGAGCAACTaGCCCTTTTGCCATGCTCTTATGAATGCTTCAGGC | + |
Preference number: 6 (lower is better) Translates to: VTSIFFLAQQSN*PFCHALMNASG Trigger: GCCTGAAGCATTCATAAGAGCATGGCAAAAGGGGCAGTTGCTCTGTTGTGCCAGGAAGAAGATGGAGGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS CCA 72 bp | TGCCACAGGCCCTTCCAGCTCATCCCTCATCTCCAATaGTGTGGCACTTTTCCTCATGATCCAAAATTAGAG | + |
Preference number: 6 (lower is better) Translates to: CHRPFQLIPHLQ*CGTFPHDPKLE Trigger: CTCTAATTTTGGATCATGAGGAAAAGTGCCACACCATTGGAGATGAGGGATGAGCTGGAAGGGCCTGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654424.1 ENST00000656248.1 |
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CDS TCA 72 bp | ACCAAATACCACATGTCCTCACTCATAAGTGGGAGTTaGACAATGAGAACACATGGACACGAGGGTGGGGGT | + |
Preference number: 6 (lower is better) Translates to: TKYHMSSLISGS*TMRTHGHEGGG Trigger: ACCCCCACCCTCGTGTCCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTGAGGACATGTGGTATTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS GCA 72 bp | CTCCTTCATCTATACAGCATAGCAAGCAACATGATTTaGGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGA | + |
Preference number: 6 (lower is better) Translates to: LLHLYSIASNMI*VGSSCSQVPWG Trigger: TCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGTATAGATGAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS GCA 72 bp | GGACATTTTACTCACAGCATAGCAAGCAACATGATTTaGGTGGGATCCTCTTGCTCTCAAGTCCCATGGGGA | + |
Preference number: 6 (lower is better) Translates to: GHFTHSIASNMI*VGSSCSQVPWG Trigger: TCCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGTGAGTAAAATGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667732.1 |
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CDS CCA 72 bp | AAAGGGAAACTAAAGAATCTTCAGGTTTTACAGACCTaGCCGTGTATTGGTGGTGGGGAGGCAACTCTGGTG | + |
Preference number: 6 (lower is better) Translates to: KGKLKNLQVLQT*PCIGGGEATLV Trigger: CACCAGAGTTGCCTCCCCACCACCAATACACGGCCAGGTCTGTAAAACCTGAAGATTCTTTAGTTTCCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CAA 72 bp | TCTCCTTCATCTATACAGCATAGCAAGCAACATGATTaGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGG | + |
Preference number: 6 (lower is better) Translates to: SPSSIQHSKQHD*RGILLLSSPMG Trigger: CCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGTATAGATGAAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS CAA 72 bp | AACCAAATACCACATGTCCTCACTCATAAGTGGGAGTaGAACAATGAGAACACATGGACACGAGGGTGGGGG | + |
Preference number: 6 (lower is better) Translates to: NQIPHVLTHKWE*NNENTWTRGWG Trigger: CCCCCACCCTCGTGTCCATGTGTTCTCATTGTTCAACTCCCACTTATGAGTGAGGACATGTGGTATTTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS CAA 72 bp | AGGACATTTTACTCACAGCATAGCAAGCAACATGATTaGCGTGGGATCCTCTTGCTCTCAAGTCCCATGGGG | + |
Preference number: 6 (lower is better) Translates to: RTFYSQHSKQHD*RGILLLSSPMG Trigger: CCCCATGGGACTTGAGAGCAAGAGGATCCCACGCAAATCATGTTGCTTGCTATGCTGTGAGTAAAATGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667732.1 |
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CDS CAA 72 bp | ATCTTACTTTGTCTACTTATCTCCTGGGTGGGGACCTaGTCTCCTGCCCTCTCCCCTAAACTCATGTTTCTT | + |
Preference number: 6 (lower is better) Translates to: ILLCLLISWVGT*SPALSPKLMFL Trigger: AAGAAACATGAGTTTAGGGGAGAGGGCAGGAGACAAGGTCCCCACCCAGGAGATAAGTAGACAAAGTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CAA 90 bp | TGGGCCTTTATCTTACTTTGTCTACTTATCTCCTGGGTGGGGACCTaGTCTCCTGCCCTCTCCCCTAAACTCATGTTTCTTCACATAAAA | + |
Preference number: 6 (lower is better) Translates to: WAFILLCLLISWVGT*SPALSPKLMFLHIK Trigger: TTTTATGTGAAGAAACATGAGTTTAGGGGAGAGGGCAGGAGACAAGGTCCCCACCCAGGAGATAAGTAGACAAAGTAAGATAAAGGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CAA 90 bp | GCCAGGCATGCTGATGGAGTTTTCACCAGTGACTTCAGTAAACTCTaGGGTCAACTTTCTGCCAAAAAGTACCTTGAGTCTCTTATGGGA | + |
Preference number: 6 (lower is better) Translates to: ARHADGVFTSDFSKL*GQLSAKKYLESLMG Trigger: TCCCATAAGAGACTCAAGGTACTTTTTGGCAGAAAGTTGACCCAAGAGTTTACTGAAGTCACTGGTGAAAACTCCATCAGCATGCCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS TCA 72 bp | CATCCCTCATCTCCAATGGTGTGGCACTTTTCCTCATaGTCCAAAATTAGAGCTAGCATTCCAGCCATCACA | + |
Preference number: 6 (lower is better) Translates to: HPSSPMVWHFSS*SKIRASIPAIT Trigger: TGTGATGGCTGGAATGCTAGCTCTAATTTTGGATCATGAGGAAAAGTGCCACACCATTGGAGATGAGGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000654424.1 ENST00000656248.1 ENST00000657202.1 ENST00000659837.1 ENST00000666093.1 ENST00000670640.1 |
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CDS TCA 72 bp | CACAACAGAGCAACTGCCCCTTTTGCCATGCTCTTATaGATGCTTCAGGCAAATGTGATTCCCAGGAATCTT | + |
Preference number: 6 (lower is better) Translates to: HNRATAPFAMLL*MLQANVIPRNL Trigger: AAGATTCCTGGGAATCACATTTGCCTGAAGCATTCATAAGAGCATGGCAAAAGGGGCAGTTGCTCTGTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS TCA 72 bp | GCCTTTGTTACAGTGTCTATGTTACCTGGCACTGTGTaGATTATAGGGCATCTGCCCAACCAAGTCTCGATA | + |
Preference number: 6 (lower is better) Translates to: AFVTVSMLPGTV*IIGHLPNQVSI Trigger: TATCGAGACTTGGTTGGGCAGATGCCCTATAATTCACACAGTGCCAGGTAACATAGACACTGTAACAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS GCA 72 bp | ATCTTCTTCCTGGCACAACAGAGCAACTGCCCCTTTTaGCATGCTCTTATGAATGCTTCAGGCAAATGTGAT | + |
Preference number: 6 (lower is better) Translates to: IFFLAQQSNCPF*HALMNASGKCD Trigger: ATCACATTTGCCTGAAGCATTCATAAGAGCATGGCAAAAGGGGCAGTTGCTCTGTTGTGCCAGGAAGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS CCA 72 bp | CAGCGTATATGCCTTTGTTACAGTGTCTATGTTACCTaGCACTGTGTGAATTATAGGGCATCTGCCCAACCA | + |
Preference number: 6 (lower is better) Translates to: QRICLCYSVYVT*HCVNYRASAQP Trigger: TGGTTGGGCAGATGCCCTATAATTCACACAGTGCCAGGTAACATAGACACTGTAACAAAGGCATATACGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CCA 72 bp | CTCCCAAACCAATTGCCAGGAAATCGGTGTCTTCGGTaGTGTGGCCCTAGACATACATTTCTTTTAAGAGTT | + |
Preference number: 6 (lower is better) Translates to: LPNQLPGNRCLR*CGPRHTFLLRV Trigger: AACTCTTAAAAGAAATGTATGTCTAGGGCCACACCACCGAAGACACCGATTTCCTGGCAATTGGTTTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS GCA 72 bp | AGTGAGACACAGACACATCTCCCTATAACCCACCTATaGCTTAGGCTCATTCATGGGCCTTTATCTTACTTT | + |
Preference number: 6 (lower is better) Translates to: SETQTHLPITHL*LRLIHGPLSYF Trigger: AAAGTAAGATAAAGGCCCATGAATGAGCCTAAGGCATAGGTGGGTTATAGGGAGATGTGTCTGTGTCTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS GCA 72 bp | GTACACAATTGTTCCATCTTGATCCCTTGGTTAAGATaGTGTCTGCTAGGTTCCTCCATTGTAGAGTCACCA | + |
Preference number: 6 (lower is better) Translates to: VHNCSILIPWLR*CLLGSSIVESP Trigger: TGGTGACTCTACAATGGAGGAACCTAGCAGACAGCATCTTAACCAAGGGATCAAGATGGAACAATTGTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658966.1 ENST00000667732.1 |
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CDS GCA 72 bp | TCTGAGAGCCTTAATATGTACAATGTTTTTCTGGTCTaGAGCAGTGAGGGAGAATCTCCCGACTTTCCAGAA | + |
Preference number: 6 (lower is better) Translates to: SESLNMYNVFLV*SSEGESPDFPE Trigger: TTCTGGAAAGTCGGGAGATTCTCCCTCACTGCTGCAGACCAGAAAAACATTGTACATATTAAGGCTCTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS CCA 72 bp | AAGTTCTCTTCTACAGCTTTGAGAGCTTTGGATAACTaGAATGAAGGCATGGGGTTACCTCCATCTTCTTCC | + |
Preference number: 6 (lower is better) Translates to: KFSSTALRALDN*NEGMGLPPSSS Trigger: GGAAGAAGATGGAGGTAACCCCATGCCTTCATTCCAGTTATCCAAAGCTCTCAAAGCTGTAGAAGAGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000663653.1 ENST00000671138.1 |
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CDS CCA 72 bp | ACCTTCTTCCCTTTCTCTTCTGGGTCTAGCTTTTCTTaGGGTATGGCAGAGAGAAGAAAAGGGAAACTAAAG | + |
Preference number: 6 (lower is better) Translates to: TFFPFSSGSSFS*GMAERRKGKLK Trigger: CTTTAGTTTCCCTTTTCTTCTCTCTGCCATACCCCAAGAAAAGCTAGACCCAGAAGAGAAAGGGAAGAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CCA 72 bp | ACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTGGTaGGTATATTCGTGCATTCCTTCTGTATTCTTATGG | + |
Preference number: 6 (lower is better) Translates to: TFGAKLMTTSQW*VYSCIPSVFLW Trigger: CCATAAGAATACAGAAGGAATGCACGAATATACCCACCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS GCA 72 bp | AAGCTGATGACAACTTCCCAGTGGTGGGTATATTCGTaGATTCCTTCTGTATTCTTATGGCTGTCTCTGATT | + |
Preference number: 6 (lower is better) Translates to: KLMTTSQWWVYS*IPSVFLWLSLI Trigger: AATCAGAGACAGCCATAAGAATACAGAAGGAATGCACGAATATACCCACCACTGGGAAGTTGTCATCAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS CCA 72 bp | GCAGATGGGAACTGGATACACAGTGGATTTGCAGCATaGCTGAAGAACTTATTGGTTTGTAGCAAAATAAGC | + |
Preference number: 6 (lower is better) Translates to: ADGNWIHSGFAA*LKNLLVCSKIS Trigger: GCTTATTTTGCTACAAACCAATAAGTTCTTCAGCCATGCTGCAAATCCACTGTGTATCCAGTTCCCATCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000652681.1 ENST00000654424.1 ENST00000656248.1 ENST00000658966.1 ENST00000663653.1 ENST00000666093.1 ENST00000667732.1 ENST00000670414.1 ENST00000670640.1 ENST00000671138.1 |
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CDS CCA 72 bp | AGGTTTTCAACAGTCATCAAGAGTGGACATGGTGTCTaGGAAGATACCTGCTTAATTGACTGCTTTTGTCCA | + |
Preference number: 6 (lower is better) Translates to: RFSTVIKSGHGV*EDTCLIDCFCP Trigger: TGGACAAAAGCAGTCAATTAAGCAGGTATCTTCCCAGACACCATGTCCACTCTTGATGACTGTTGAAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656248.1 ENST00000657202.1 ENST00000666093.1 ENST00000670640.1 |
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CDS CCA 72 bp | AAGACCTTTGGAGCAAAGCTGATGACAACTTCCCAGTaGTGGGTATATTCGTGCATTCCTTCTGTATTCTTA | + |
Preference number: 6 (lower is better) Translates to: KTFGAKLMTTSQ*WVYSCIPSVFL Trigger: TAAGAATACAGAAGGAATGCACGAATATACCCACCACTGGGAAGTTGTCATCAGCTTTGCTCCAAAGGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS CCA 72 bp | CTGATGGAGTTTTCACCAGTGACTTCAGTAAACTCTTaGGTCAACTTTCTGCCAAAAAGTACCTTGAGTCTC | + |
Preference number: 6 (lower is better) Translates to: LMEFSPVTSVNS*VNFLPKSTLSL Trigger: GAGACTCAAGGTACTTTTTGGCAGAAAGTTGACCCAAGAGTTTACTGAAGTCACTGGTGAAAACTCCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS CAA 72 bp | GCTGATGGAGTTTTCACCAGTGACTTCAGTAAACTCTaGGGTCAACTTTCTGCCAAAAAGTACCTTGAGTCT | + |
Preference number: 6 (lower is better) Translates to: ADGVFTSDFSKL*GQLSAKKYLES Trigger: AGACTCAAGGTACTTTTTGGCAGAAAGTTGACCCAAGAGTTTACTGAAGTCACTGGTGAAAACTCCATCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS TCA 72 bp | CAAACTAGAGGGCTTTGGCCTTTTCAGTTTGGCTCTTaGCAAAGACATTTTCCATTTGTAGACGCTGTCAAA | + |
Preference number: 6 (lower is better) Translates to: QTRGLWPFQFGS*QRHFPFVDAVK Trigger: TTTGACAGCGTCTACAAATGGAAAATGTCTTTGTCAAGAGCCAAACTGAAAAGGCCAAAGCCCTCTAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS TCA 72 bp | CAAACTAAAGGCAATTCATGGCCTTACCTCAGTTCCTaGTGGGGTTATCTAAGGTTTTCAACAGTCATCAAG | + |
Preference number: 6 (lower is better) Translates to: QTKGNSWPYLSS*WGYLRFSTVIK Trigger: CTTGATGACTGTTGAAAACCTTAGATAACCCCATCAGGAACTGAGGTAAGGCCATGAATTGCCTTTAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656248.1 ENST00000657202.1 ENST00000666093.1 ENST00000670640.1 |
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CDS TCA 72 bp | GAGACCTCTCTATCTCACTTATCTAGCTATACTACGTaGAGCAGTGATTTTCAACCTTGGCTGACATTAGAC | + |
Preference number: 6 (lower is better) Translates to: ETSLSHLSSYTT*SSDFQPWLTLD Trigger: GTCTAATGTCAGCCAAGGTTGAAAATCACTGCTTCACGTAGTATAGCTAGATAAGTGAGATAGAGAGGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS CCA 72 bp | GATGCCTTTCAAACAGACTCCTATGTCCTTTTCACATaGTCCCATCATTCTTTGAGCACGTTCTTACTTTCT | + |
Preference number: 6 (lower is better) Translates to: DAFQTDSYVLFT*SHHSLSTFLLS Trigger: AGAAAGTAAGAACGTGCTCAAAGAATGATGGGACCATGTGAAAAGGACATAGGAGTCTGTTTGAAAGGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652681.1 ENST00000658966.1 ENST00000667732.1 |
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CDS CCA 72 bp | GTCTTTGAGAAGACTGAGGGGGAAGGTAAAAGTATGTaGACTTCTCTTATTTACACACCTTCTTCCCTTTCT | + |
Preference number: 6 (lower is better) Translates to: VFEKTEGEGKSM*TSLIYTPSSLS Trigger: AGAAAGGGAAGAAGGTGTGTAAATAAGAGAAGTCCACATACTTTTACCTTCCCCCTCAGTCTTCTCAAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS TCA 72 bp | ATGGTCCCATCATTCTTTGAGCACGTTCTTACTTTCTaGCACAGAAAGCTTCTCCAGGTTCATCTTGTATTT | + |
Preference number: 6 (lower is better) Translates to: MVPSFFEHVLTF*HRKLLQVHLVF Trigger: AAATACAAGATGAACCTGGAGAAGCTTTCTGTGTCAGAAAGTAAGAACGTGCTCAAAGAATGATGGGACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652681.1 ENST00000658966.1 ENST00000667732.1 |
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CDS CCA 72 bp | CATTTTTATCCTCAGAGTTATCCTATATTTGGCCAGTaGGATGCCTTTCAAACAGACTCCTATGTCCTTTTC | + |
Preference number: 6 (lower is better) Translates to: HFYPQSYPIFGQ*DAFQTDSYVLF Trigger: GAAAAGGACATAGGAGTCTGTTTGAAAGGCATCCCACTGGCCAAATATAGGATAACTCTGAGGATAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000652681.1 ENST00000658966.1 ENST00000667732.1 |
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CDS CAA 72 bp | AGTGCTTGTATATTACCCCCGGCCAATTGTAAATGCTaGGAAAGGAAGCCTTATCGTATATGCCTTTGTTTA | + |
Preference number: 6 (lower is better) Translates to: SACILPPANCKC*ERKPYRICLCL Trigger: TAAACAAAGGCATATACGATAAGGCTTCCTTTCCAAGCATTTACAATTGGCCGGGGGTAATATACAAGCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CAA 72 bp | GTAAACTCTTGGGTCAACTTTCTGCCAAAAAGTACCTaGAGTCTCTTATGGGAAAACGTGTTAGGTAAAGAG | + |
Preference number: 6 (lower is better) Translates to: VNSWVNFLPKST*SLLWENVLGKE Trigger: CTCTTTACCTAACACGTTTTCCCATAAGAGACTCAAGGTACTTTTTGGCAGAAAGTTGACCCAAGAGTTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS TCA 72 bp | TTTAATATAGATAAACTTCTAGTGAGCAGCTTCTTTTaGCTGTGTACATCCTGCTTGATTCACAGGGGGCAA | + |
Preference number: 6 (lower is better) Translates to: FNIDKLLVSSFF*LCTSCLIHRGQ Trigger: TTGCCCCCTGTGAATCAAGCAGGATGTACACAGTCAAAAGAAGCTGCTCACTAGAAGTTTATCTATATTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417654.1 |
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CDS TCA 72 bp | AAGAGAGCACTCACAATAAGCAAACGTTTTGAGATCTaGATAGTGTTCCTGGCTTACTTGGGGTTATTTCTA | + |
Preference number: 6 (lower is better) Translates to: KRALTISKRFEI*IVFLAYLGLFL Trigger: TAGAAATAACCCCAAGTAAGCCAGGAACACTATTCAGATCTCAAAACGTTTGCTTATTGTGAGTGCTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS TCA 72 bp | TTAAGGATAATTCTGTTTGGGTGTGATCAGACAAGATaGCCTCTTTGCCCACTAGATGATAATTCTGTGAGA | + |
Preference number: 6 (lower is better) Translates to: LRIILFGCDQTR*PLCPLDDNSVR Trigger: TCTCACAGAATTATCATCTAGTGGGCAAAGAGGTCATCTTGTCTGATCACACCCAAACAGAATTATCCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS TCA 72 bp | AATTCTTCCCAATCAGTTGATTCACTATCGTTCAGGTaGTCTGCAGTTGCAGATAAGCGTGGTATACAAATT | + |
Preference number: 6 (lower is better) Translates to: NSSQSVDSLSFR*SAVADKRGIQI Trigger: AATTTGTATACCACGCTTATCTGCAACTGCAGATCACCTGAACGATAGTGAATCAACTGATTGGGAAGAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670414.1 |
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CDS CAA 72 bp | TTTACTGACATTTTTATCCTCAGAGTTATCCTATATTaGGCCAGTGGGATGCCTTTCAAACAGACTCCTATG | + |
Preference number: 6 (lower is better) Translates to: FTDIFILRVILY*ASGMPFKQTPM Trigger: CATAGGAGTCTGTTTGAAAGGCATCCCACTGGCCAAATATAGGATAACTCTGAGGATAAAAATGTCAGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000652681.1 ENST00000658966.1 ENST00000667732.1 |
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CDS TCA 72 bp | TTTCTTTCCCATCACATAATGGCATCTTTGAAGCTGTaGTCCCAAATTTTATCTAACGCTGTCTTCTTTTCC | + |
Preference number: 6 (lower is better) Translates to: FLSHHIMASLKL*SQILSNAVFFS Trigger: GGAAAAGAAGACAGCGTTAGATAAAATTTGGGATCACAGCTTCAAAGATGCCATTATGTGATGGGAAAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS TCA 72 bp | GGAAATAGCACCAAATTAGAGCATGGCCCATTACTATaGAAATATCAAGGCATTCTGGGTCTAACTATATTC | + |
Preference number: 6 (lower is better) Translates to: GNSTKLEHGPLL*KYQGILGLTIF Trigger: GAATATAGTTAGACCCAGAATGCCTTGATATTTTCATAGTAATGGGCCATGCTCTAATTTGGTGCTATTTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656248.1 ENST00000666093.1 ENST00000670640.1 |
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CDS GCA 72 bp | TCACATAAAAACACAGAAATAGGAACTCTTTTACACTaGTGGTGGGAGTGTAAATTAGTTCAACCATTGTGG | + |
Preference number: 6 (lower is better) Translates to: SHKNTEIGTLLH*WWECKLVQPLW Trigger: CCACAATGGTTGAACTAATTTACACTCCCACCAGCAGTGTAAAAGAGTTCCTATTTCTGTGTTTTTATGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS GCA 72 bp | TGGAATTTGATTTTGGGTTATTTTAACGAGTTAGCCTaGCACGGTTTCATGGATGCTAATAGAAGATACAAG | + |
Preference number: 6 (lower is better) Translates to: WNLILGYFNELA*HGFMDANRRYK Trigger: CTTGTATCTTCTATTAGCATCCATGAAACCGTGGCAGGCTAACTCGTTAAAATAACCCAAAATCAAATTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667732.1 |
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CDS CCA 72 bp | CATAAAAACACAGAAATAGGAACTCTTTTACACTGCTaGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAG | + |
Preference number: 6 (lower is better) Translates to: HKNTEIGTLLHC*WECKLVQPLWK Trigger: CTTCCACAATGGTTGAACTAATTTACACTCCCACCAGCAGTGTAAAAGAGTTCCTATTTCTGTGTTTTTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CCA 72 bp | GATAGAAAATTAGTTGGGTGGGAATTGCTTTTTATGTaGCTCCAAGAAACCTGGAACATGTGTGTATTTATC | + |
Preference number: 6 (lower is better) Translates to: DRKLVGWELLFM*LQETWNMCVFI Trigger: GATAAATACACACATGTTCCAGGTTTCTTGGAGCCACATAAAAAGCAATTCCCACCCAACTAATTTTCTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666093.1 |
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CDS CAA 90 bp | GATAACTTAAGTGCTTGTATATTACCCCCGGCCAATTGTAAATGCTaGGAAAGGAAGCCTTATCGTATATGCCTTTGTTTATTTGTGTTT | + |
Preference number: 6 (lower is better) Translates to: DNLSACILPPANCKC*ERKPYRICLCLFVF Trigger: AAACACAAATAAACAAAGGCATATACGATAAGGCTTCCTTTCCAAGCATTTACAATTGGCCGGGGGTAATATACAAGCACTTAAGTTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663653.1 |
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CDS CAA 90 bp | GATCGACCCATGCTGCTTTTATTAATTGAAGGTTTAGTCTCACAATaGACTGTTAGCTCCTCAATTAAGTATAGGGAAATAGCACCAAAT | + |
Preference number: 6 (lower is better) Translates to: DRPMLLLLIEGLVSQ*TVSSSIKYREIAPN Trigger: ATTTGGTGCTATTTCCCTATACTTAATTGAGGAGCTAACAGTCAATTGTGAGACTAAACCTTCAATTAATAAAAGCAGCATGGGTCGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656248.1 ENST00000666093.1 |
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CDS TCA 72 bp | TTTGACCTGGAACTGTCTTTTATGACCTTCACATTTTaGAGAGCACAGATCACTTATTGCAAAGAATATTGT | + |
Preference number: 6 (lower is better) Translates to: FDLELSFMTFTF*RAQITYCKEYC Trigger: ACAATATTCTTTGCAATAAGTGATCTGTGCTCTTCAAAATGTGAAGGTCATAAAAGACAGTTCCAGGTCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658966.1 ENST00000667732.1 |