RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02835 (Homo sapiens)

Ensembl gene IDs: ENSG00000285711

Ensembl transcript IDs: ENST00000649562.1

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp ACTGGGCAGGCAGCTCCAGGCGCCAGCACAGGCGTGGGTTCCGTGTaGGACTGGCTGGACCAGGCGTTACCACAAATGGCTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: TGQAAPGASTGVGSV*DWLDQALPQMASTA
Trigger: TGCAGTGGAAGCCATTTGTGGTAACGCCTGGTCCAGCCAGTCTCACACGGAACCCACGCCTGTGCTGGCGCCTGGAGCTGCCTGCCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 90 bp CAGCTCCAGGCGCCAGCACAGGCGTGGGTTCCGTGTGAGACTGGCTaGACCAGGCGTTACCACAAATGGCTTCCACTGCAGGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: QLQAPAQAWVPCETG*TRRYHKWLPLQALG
Trigger: TCCCAGTGCCTGCAGTGGAAGCCATTTGTGGTAACGCCTGGTCCAGCCAGTCTCACACGGAACCCACGCCTGTGCTGGCGCCTGGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 90 bp GGGCCCGCTGGCCTCTTCTGCTCACTCGCCCCAGCAGGCTGTATTTaGCTCATAATACTGACCTGGATCCCACACCTGCCAAGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: GPAGLFCSLAPAGCI*LIILTWIPHLPRAS
Trigger: GCTCGCCCTTGGCAGGTGTGGGATCCAGGTCAGTATTATGAGCCAAATACAGCCTGCTGGGGCGAGTGAGCAGAAGAGGCCAGCGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 90 bp CTCTGCGGCTGGTGGTGCCTTTGCCTGAGTTTTACACGGGCCCGCTaGCCTCTTCTGCTCACTCGCCCCAGCAGGCTGTATTTGGCTCAT +
Preference number: 5 (lower is better)
Translates to: LCGWWCLCLSFTRAR*PLLLTRPSRLYLAH
Trigger: ATGAGCCAAATACAGCCTGCTGGGGCGAGTGAGCAGAAGAGGCCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS GCA 90 bp CGTGTGAGACTGGCTGGACCAGGCGTTACCACAAATGGCTTCCACTaGAGGCACTGGGAAATACGATGGCACCCGGAAGCTTGGAGACAC +
Preference number: 5 (lower is better)
Translates to: RVRLAGPGVTTNGFH*RHWEIRWHPEAWRH
Trigger: GTGTCTCCAAGCTTCCGGGTGCCATCGTATTTCCCAGTGCCTGCAGTGGAAGCCATTTGTGGTAACGCCTGGTCCAGCCAGTCTCACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS GCA 90 bp CGTGTCACTTTTTCAGTTGGAAACCTCTGCGGCTGGTGGTGCCTTTaGCTGAGTTTTACACGGGCCCGCTGGCCTCTTCTGCTCACTCGC +
Preference number: 5 (lower is better)
Translates to: RVTFSVGNLCGWWCL*LSFTRARWPLLLTR
Trigger: GCGAGTGAGCAGAAGAGGCCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 90 bp CCACAGCAGTTCGTTTCTCCTCGTCGCCCACAAAGTGGCGAGCGGTaGGCATGTTTCAGCCCTGTTTGTGTTACCGCTCTTTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: PQQFVSPRRPQSGER*ACFSPVCVTALSVP
Trigger: TGGGACTGAAAGAGCGGTAACACAAACAGGGCTGAAACATGCCCACCGCTCGCCACTTTGTGGGCGACGAGGAGAAACGAACTGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 90 bp GGCGTTACCACAAATGGCTTCCACTGCAGGCACTGGGAAATACGATaGCACCCGGAAGCTTGGAGACACCAGAAACTGCGGAGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: GVTTNGFHCRHWEIR*HPEAWRHQKLRSPK
Trigger: TTTGGGGCTCCGCAGTTTCTGGTGTCTCCAAGCTTCCGGGTGCCATCGTATTTCCCAGTGCCTGCAGTGGAAGCCATTTGTGGTAACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS GCA 90 bp TCAAACCGTGTCACTTTTTCAGTTGGAAACCTCTGCGGCTGGTGGTaGCTTTGCCTGAGTTTTACACGGGCCCGCTGGCCTCTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: SNRVTFSVGNLCGWW*LCLSFTRARWPLLL
Trigger: GAGCAGAAGAGGCCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACGGTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS GCA 90 bp CCACTGCGAAGATCAAACCGTGTCACTTTTTCAGTTGGAAACCTCTaGGGCTGGTGGTGCCTTTGCCTGAGTTTTACACGGGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: PLRRSNRVTFSVGNL*GWWCLCLSFTRARW
Trigger: CCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACGGTTTGATCTTCGCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 90 bp GTCCCAGGGTCTTGTTCCACGACAAGAATGAGGTACACGGACAAGTaGAGGGTGAGCAAGGCAGAGAGGAGCTTCATTGACAGAACGGCT +
Preference number: 5 (lower is better)
Translates to: VPGSCSTTRMRYTDK*RVSKAERSFIDRTA
Trigger: AGCCGTTCTGTCAATGAAGCTCCTCTCTGCCTTGCTCACCCTCCACTTGTCCGTGTACCTCATTCTTGTCGTGGAACAAGACCCTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 90 bp AGATCAAACCGTGTCACTTTTTCAGTTGGAAACCTCTGCGGCTGGTaGTGCCTTTGCCTGAGTTTTACACGGGCCCGCTGGCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: RSNRVTFSVGNLCGW*CLCLSFTRARWPLL
Trigger: CAGAAGAGGCCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACGGTTTGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 90 bp CGAAGATCAAACCGTGTCACTTTTTCAGTTGGAAACCTCTGCGGCTaGTGGTGCCTTTGCCTGAGTTTTACACGGGCCCGCTGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: RRSNRVTFSVGNLCG*WCLCLSFTRARWPL
Trigger: AAGAGGCCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACGGTTTGATCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 90 bp TTTCAGCCCTGTTTGTGTTACCGCTCTTTCAGTCCCACCATTCACTaGGTCCCAGGGTCTTGTTCCACGACAAGAATGAGGTACACGGAC +
Preference number: 5 (lower is better)
Translates to: FQPCLCYRSFSPTIH*VPGSCSTTRMRYTD
Trigger: GTCCGTGTACCTCATTCTTGTCGTGGAACAAGACCCTGGGACCCAGTGAATGGTGGGACTGAAAGAGCGGTAACACAAACAGGGCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp TGGCCACTGCACACAGCCATGCGTGCTTGCTGCCACTaGGCAGGCAGCTCCAGGCGCCAGCACAGGCGTGGG +
Preference number: 6 (lower is better)
Translates to: WPLHTAMRACCH*AGSSRRQHRRG
Trigger: CCCACGCCTGTGCTGGCGCCTGGAGCTGCCTGCCCAGTGGCAGCAAGCACGCATGGCTGTGTGCAGTGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CAA 90 bp CGGGCCCGCTGGCCTCTTCTGCTCACTCGCCCCAGCAGGCTGTATTaGGCTCATAATACTGACCTGGATCCCACACCTGCCAAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: RARWPLLLTRPSRLY*AHNTDLDPTPAKGE
Trigger: CTCGCCCTTGGCAGGTGTGGGATCCAGGTCAGTATTATGAGCCAAATACAGCCTGCTGGGGCGAGTGAGCAGAAGAGGCCAGCGGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS GCA 72 bp TACGATGGCACCCGGAAGCTTGGAGACACCAGAAACTaGGGAGCCCCAAAGAGGGTGTCACAGCCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: YDGTRKLGDTRN*GAPKRVSQPWL
Trigger: GAGCCAGGGCTGTGACACCCTCTTTGGGGCTCCGCAGTTTCTGGTGTCTCCAAGCTTCCGGGTGCCATCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp TGGTGGTGCCTTTGCCTGAGTTTTACACGGGCCCGCTaGCCTCTTCTGCTCACTCGCCCCAGCAGGCTGTAT +
Preference number: 6 (lower is better)
Translates to: WWCLCLSFTRAR*PLLLTRPSRLY
Trigger: ATACAGCCTGCTGGGGCGAGTGAGCAGAAGAGGCCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp GCCCCAGCAGGCTGTATTTGGCTCATAATACTGACCTaGATCCCACACCTGCCAAGGGCGAGCCTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: APAGCIWLIILT*IPHLPRASLVR
Trigger: CCTCACCAGGCTCGCCCTTGGCAGGTGTGGGATCCAGGTCAGTATTATGAGCCAAATACAGCCTGCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CAA 72 bp CTGCAGGCACTGGGAAATACGATGGCACCCGGAAGCTaGGAGACACCAGAAACTGCGGAGCCCCAAAGAGGG +
Preference number: 6 (lower is better)
Translates to: LQALGNTMAPGS*ETPETAEPQRG
Trigger: CCCTCTTTGGGGCTCCGCAGTTTCTGGTGTCTCCAAGCTTCCGGGTGCCATCGTATTTCCCAGTGCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CAA 90 bp TCGTCGCCCACAAAGTGGCGAGCGGTGGGCATGTTTCAGCCCTGTTaGTGTTACCGCTCTTTCAGTCCCACCATTCACTGGGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: SSPTKWRAVGMFQPC*CYRSFSPTIHWVPG
Trigger: CCCTGGGACCCAGTGAATGGTGGGACTGAAAGAGCGGTAACACAAACAGGGCTGAAACATGCCCACCGCTCGCCACTTTGTGGGCGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CAA 90 bp CCGTGTCACTTTTTCAGTTGGAAACCTCTGCGGCTGGTGGTGCCTTaGCCTGAGTTTTACACGGGCCCGCTGGCCTCTTCTGCTCACTCG +
Preference number: 6 (lower is better)
Translates to: PCHFFSWKPLRLVVP*PEFYTGPLASSAHS
Trigger: CGAGTGAGCAGAAGAGGCCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS GCA 72 bp CTGGCTGGACCAGGCGTTACCACAAATGGCTTCCACTaGAGGCACTGGGAAATACGATGGCACCCGGAAGCT +
Preference number: 6 (lower is better)
Translates to: LAGPGVTTNGFH*RHWEIRWHPEA
Trigger: AGCTTCCGGGTGCCATCGTATTTCCCAGTGCCTGCAGTGGAAGCCATTTGTGGTAACGCCTGGTCCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp TGCAGGCACTGGGAAATACGATGGCACCCGGAAGCTTaGAGACACCAGAAACTGCGGAGCCCCAAAGAGGGT +
Preference number: 6 (lower is better)
Translates to: CRHWEIRWHPEA*RHQKLRSPKEG
Trigger: ACCCTCTTTGGGGCTCCGCAGTTTCTGGTGTCTCCAAGCTTCCGGGTGCCATCGTATTTCCCAGTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS GCA 72 bp GTCACTTTTTCAGTTGGAAACCTCTGCGGCTGGTGGTaGCTTTGCCTGAGTTTTACACGGGCCCGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: VTFSVGNLCGWW*LCLSFTRARWP
Trigger: AGGCCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp CCAGGCGTTACCACAAATGGCTTCCACTGCAGGCACTaGGAAATACGATGGCACCCGGAAGCTTGGAGACAC +
Preference number: 6 (lower is better)
Translates to: PGVTTNGFHCRH*EIRWHPEAWRH
Trigger: GTGTCTCCAAGCTTCCGGGTGCCATCGTATTTCCCAGTGCCTGCAGTGGAAGCCATTTGTGGTAACGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp AGGAGTAGCAAGGGGTGTGTTAATAAGCATGGGGTCTaGCCACTGCACACAGCCATGCGTGCTTGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: RSSKGCVNKHGV*PLHTAMRACCH
Trigger: GTGGCAGCAAGCACGCATGGCTGTGTGCAGTGGCCAGACCCCATGCTTATTAACACACCCCTTGCTACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp GGCCTCTTCTGCTCACTCGCCCCAGCAGGCTGTATTTaGCTCATAATACTGACCTGGATCCCACACCTGCCA +
Preference number: 6 (lower is better)
Translates to: GLFCSLAPAGCI*LIILTWIPHLP
Trigger: TGGCAGGTGTGGGATCCAGGTCAGTATTATGAGCCAAATACAGCCTGCTGGGGCGAGTGAGCAGAAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp CGTGTCACTTTTTCAGTTGGAAACCTCTGCGGCTGGTaGTGCCTTTGCCTGAGTTTTACACGGGCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: RVTFSVGNLCGW*CLCLSFTRARW
Trigger: CCAGCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CAA 72 bp TGGCCTCTTCTGCTCACTCGCCCCAGCAGGCTGTATTaGGCTCATAATACTGACCTGGATCCCACACCTGCC +
Preference number: 6 (lower is better)
Translates to: WPLLLTRPSRLY*AHNTDLDPTPA
Trigger: GGCAGGTGTGGGATCCAGGTCAGTATTATGAGCCAAATACAGCCTGCTGGGGCGAGTGAGCAGAAGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp TTCGTTTCTCCTCGTCGCCCACAAAGTGGCGAGCGGTaGGCATGTTTCAGCCCTGTTTGTGTTACCGCTCTT +
Preference number: 6 (lower is better)
Translates to: FVSPRRPQSGER*ACFSPVCVTAL
Trigger: AAGAGCGGTAACACAAACAGGGCTGAAACATGCCCACCGCTCGCCACTTTGTGGGCGACGAGGAGAAACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp ACAAATGGCTTCCACTGCAGGCACTGGGAAATACGATaGCACCCGGAAGCTTGGAGACACCAGAAACTGCGG +
Preference number: 6 (lower is better)
Translates to: TNGFHCRHWEIR*HPEAWRHQKLR
Trigger: CCGCAGTTTCTGGTGTCTCCAAGCTTCCGGGTGCCATCGTATTTCCCAGTGCCTGCAGTGGAAGCCATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp AACCGTGTCACTTTTTCAGTTGGAAACCTCTGCGGCTaGTGGTGCCTTTGCCTGAGTTTTACACGGGCCCGC +
Preference number: 6 (lower is better)
Translates to: NRVTFSVGNLCG*WCLCLSFTRAR
Trigger: GCGGGCCCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CAA 90 bp GTGTTACCGCTCTTTCAGTCCCACCATTCACTGGGTCCCAGGGTCTaGTTCCACGACAAGAATGAGGTACACGGACAAGTGGAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: VLPLFQSHHSLGPRV*FHDKNEVHGQVEGE
Trigger: CTCACCCTCCACTTGTCCGTGTACCTCATTCTTGTCGTGGAACAAGACCCTGGGACCCAGTGAATGGTGGGACTGAAAGAGCGGTAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp GCCACTGCGAAGATCAAACCGTGTCACTTTTTCAGTTaGAAACCTCTGCGGCTGGTGGTGCCTTTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: ATAKIKPCHFFS*KPLRLVVPLPE
Trigger: CTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACGGTTTGATCTTCGCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS CCA 72 bp TCTTGTTCCACGACAAGAATGAGGTACACGGACAAGTaGAGGGTGAGCAAGGCAGAGAGGAGCTTCATTGAC +
Preference number: 6 (lower is better)
Translates to: SCSTTRMRYTDK*RVSKAERSFID
Trigger: GTCAATGAAGCTCCTCTCTGCCTTGCTCACCCTCCACTTGTCCGTGTACCTCATTCTTGTCGTGGAACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649562.1
CDS GCA 72 bp AGATCAAACCGTGTCACTTTTTCAGTTGGAAACCTCTaGGGCTGGTGGTGCCTTTGCCTGAGTTTTACACGG +
Preference number: 6 (lower is better)
Translates to: RSNRVTFSVGNL*GWWCLCLSFTR
Trigger: CCGTGTAAAACTCAGGCAAAGGCACCACCAGCCGCAGAGGTTTCCAACTGAAAAAGTGACACGGTTTGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649562.1