Pregenerated sensors for LINC02832 (Homo sapiens)
Ensembl gene IDs: ENSG00000227308Ensembl transcript IDs: ENST00000442416.1, ENST00000606673.1, ENST00000607654.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AAGACTGGCCTCCTGGAAACCTTGGCATGTCCCTGGAGAGGCTGCTaGCTGCACCGTGTGCCGAGTCCTGCCTTGGCTGATGCTCACCAT | + |
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Preference number: 5 (lower is better) Translates to: KTGLLETLACPWRGC*LHRVPSPALADAHH Trigger: ATGGTGAGCATCAGCCAAGGCAGGACTCGGCACACGGTGCAGTCAGCAGCCTCTCCAGGGACATGCCAAGGTTTCCAGGAGGCCAGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS GCA 90 bp | TCATCCAGCTGTCCCACTTCCATCTCAGTCCAGAGGGGAGGCTGTTaGAGCGGATCAAGTGAGGCTGAGTCAAGCACTCGGGGCAGATTT | + |
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Preference number: 5 (lower is better) Translates to: SSSCPTSISVQRGGC*SGSSEAESSTRGRF Trigger: AAATCTGCCCCGAGTGCTTGACTCAGCCTCACTTGATCCGCTGCAACAGCCTCCCCTCTGGACTGAGATGGAAGTGGGACAGCTGGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000606673.1 |
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| CDS CCA 90 bp | GATTGTAGCAGACAGACAGGGCAGGACAACAGGGAGCAGGGAATGTaGCATGCCGGATGCCACGATTCCACACACCACAAGTGGTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: DCSRQTGQDNREQGM*HAGCHDSTHHKWFH Trigger: ATGGAACCACTTGTGGTGTGTGGAATCGTGGCATCCGGCATGCCACATTCCCTGCTCCCTGTTGTCCTGCCCTGTCTGTCTGCTACAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CCA 90 bp | TCCAAGATGCATCGCTTCACGAGCACTACTGGAGGTCCAATGTCATaGTCATCCAGCTGTCCCACTTCCATCTCAGTCCAGAGGGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SKMHRFTSTTGGPMS*SSSCPTSISVQRGG Trigger: GCCTCCCCTCTGGACTGAGATGGAAGTGGGACAGCTGGATGACCATGACATTGGACCTCCAGTAGTGCTCGTGAAGCGATGCATCTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606673.1 |
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| CDS CCA 90 bp | CAGGCAGATCCTCCTTTCCAAGATGCATCGCTTCACGAGCACTACTaGAGGTCCAATGTCATGGTCATCCAGCTGTCCCACTTCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: QADPPFQDASLHEHY*RSNVMVIQLSHFHH Trigger: GTGGTGGAAGTGGGACAGCTGGATGACCATGACATTGGACCTCCAGTAGTGCTCGTGAAGCGATGCATCTTGGAAAGGAGGATCTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442416.1 |
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| CDS GCA 90 bp | CCCAAGGGTGATGTCAGGAACGCAGGCAGATCCTCCTTTCCAAGATaGATCGCTTCACGAGCACTACTGGAGGTCCAATGTCATGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: PKGDVRNAGRSSFPR*IASRALLEVQCHGH Trigger: ATGACCATGACATTGGACCTCCAGTAGTGCTCGTGAAGCGATGCATCTTGGAAAGGAGGATCTGCCTGCGTTCCTGACATCACCCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442416.1 ENST00000606673.1 |
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| CDS CCA 90 bp | CAGGCAGATCCTCCTTTCCAAGATGCATCGCTTCACGAGCACTACTaGAGGTCCAATGTCATGGTCATCCAGCTGTCCCACTTCCATCTC | + |
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Preference number: 5 (lower is better) Translates to: QADPPFQDASLHEHY*RSNVMVIQLSHFHL Trigger: GAGATGGAAGTGGGACAGCTGGATGACCATGACATTGGACCTCCAGTAGTGCTCGTGAAGCGATGCATCTTGGAAAGGAGGATCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606673.1 |
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| CDS CCA 90 bp | CAGGGAATGTGGCATGCCGGATGCCACGATTCCACACACCACAAGTaGTTCCATTTCAGCCCAGAAATGATGAGACTAGCCTGGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: QGMWHAGCHDSTHHK*FHFSPEMMRLAWDL Trigger: CAAATCCCAGGCTAGTCTCATCATTTCTGGGCTGAAATGGAACCACTTGTGGTGTGTGGAATCGTGGCATCCGGCATGCCACATTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CCA 90 bp | TCCAAGATGCATCGCTTCACGAGCACTACTGGAGGTCCAATGTCATaGTCATCCAGCTGTCCCACTTCCACCACATGGATGAACCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: SKMHRFTSTTGGPMS*SSSCPTSTTWMNLK Trigger: TTTGAGGTTCATCCATGTGGTGGAAGTGGGACAGCTGGATGACCATGACATTGGACCTCCAGTAGTGCTCGTGAAGCGATGCATCTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442416.1 |
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| CDS TCA 90 bp | TTTGGCCAAAGAATGGAATCAGGAAAGGTGCCTTGGTATGTAAAATaGGCTGAATCAACAACAGTGGAAGGAATGCAGGAAAAAGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: FGQRMESGKVPWYVK*AESTTVEGMQEKGG Trigger: TCCGCCTTTTTCCTGCATTCCTTCCACTGTTGTTGATTCAGCTCATTTTACATACCAAGGCACCTTTCCTGATTCCATTCTTTGGCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CCA 90 bp | AAGCCACATTCTTTGCCTAATTACTTAAGCCAGAGTGTGTTCACCTaGAAATTTCCTGCTGGTCAGAGGAAGCAGTTTTGTTTCTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: KPHSLPNYLSQSVFT*KFPAGQRKQFCFCC Trigger: ACAACAGAAACAAAACTGCTTCCTCTGACCAGCAGGAAATTTCCAGGTGAACACACTCTGGCTTAAGTAATTAGGCAAAGAATGTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS TCA 90 bp | TTACTTTCTTACAAACTTGCTTTCACTTTACTCTGTGGATTCGCCTaGAATTCTTTGTTGTGTGAGATCCAAGATCCTTCTCTTGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: LLSYKLAFTLLCGFA*NSLLCEIQDPSLGV Trigger: GACCCCAAGAGAAGGATCTTGGATCTCACACAACAAAGAATTTCAGGCGAATCCACAGAGTAAAGTGAAAGCAAGTTTGTAAGAAAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CCA 72 bp | CATCGCTTCACGAGCACTACTGGAGGTCCAATGTCATaGTCATCCAGCTGTCCCACTTCCACCACATGGATG | + |
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Preference number: 6 (lower is better) Translates to: HRFTSTTGGPMS*SSSCPTSTTWM Trigger: CATCCATGTGGTGGAAGTGGGACAGCTGGATGACCATGACATTGGACCTCCAGTAGTGCTCGTGAAGCGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442416.1 |
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| CDS CCA 72 bp | CCTCCTTTCCAAGATGCATCGCTTCACGAGCACTACTaGAGGTCCAATGTCATGGTCATCCAGCTGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PPFQDASLHEHY*RSNVMVIQLSH Trigger: GTGGGACAGCTGGATGACCATGACATTGGACCTCCAGTAGTGCTCGTGAAGCGATGCATCTTGGAAAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442416.1 ENST00000606673.1 |
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| CDS CCA 72 bp | CATCGCTTCACGAGCACTACTGGAGGTCCAATGTCATaGTCATCCAGCTGTCCCACTTCCATCTCAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HRFTSTTGGPMS*SSSCPTSISVQ Trigger: CTGGACTGAGATGGAAGTGGGACAGCTGGATGACCATGACATTGGACCTCCAGTAGTGCTCGTGAAGCGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606673.1 |
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| CDS GCA 72 bp | GATGTCAGGAACGCAGGCAGATCCTCCTTTCCAAGATaGATCGCTTCACGAGCACTACTGGAGGTCCAATGT | + |
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Preference number: 6 (lower is better) Translates to: DVRNAGRSSFPR*IASRALLEVQC Trigger: ACATTGGACCTCCAGTAGTGCTCGTGAAGCGATGCATCTTGGAAAGGAGGATCTGCCTGCGTTCCTGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442416.1 ENST00000606673.1 |
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| CDS CCA 72 bp | TGGCATGCCGGATGCCACGATTCCACACACCACAAGTaGTTCCATTTCAGCCCAGAAATGATGAGACTAGCC | + |
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Preference number: 6 (lower is better) Translates to: WHAGCHDSTHHK*FHFSPEMMRLA Trigger: GGCTAGTCTCATCATTTCTGGGCTGAAATGGAACCACTTGTGGTGTGTGGAATCGTGGCATCCGGCATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CAA 90 bp | TGCTGGTCAGAGGAAGCAGTTTTGTTTCTGTTGTTGATGTCTTGGTaGAGGGAGGGGCTCCAGGTGATTGTAGCAGACAGACAGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: CWSEEAVLFLLLMSW*REGLQVIVADRQGR Trigger: CCTGCCCTGTCTGTCTGCTACAATCACCTGGAGCCCCTCCCTCAACCAAGACATCAACAACAGAAACAAAACTGCTTCCTCTGACCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CAA 90 bp | GAGTGTGTTCACCTGGAAATTTCCTGCTGGTCAGAGGAAGCAGTTTaGTTTCTGTTGTTGATGTCTTGGTTGAGGGAGGGGCTCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ECVHLEISCWSEEAV*FLLLMSWLREGLQV Trigger: CACCTGGAGCCCCTCCCTCAACCAAGACATCAACAACAGAAACAAAACTGCTTCCTCTGACCAGCAGGAAATTTCCAGGTGAACACACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CAA 90 bp | CTGGAAATTTCCTGCTGGTCAGAGGAAGCAGTTTTGTTTCTGTTGTaGATGTCTTGGTTGAGGGAGGGGCTCCAGGTGATTGTAGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LEISCWSEEAVLFLL*MSWLREGLQVIVAD Trigger: GTCTGCTACAATCACCTGGAGCCCCTCCCTCAACCAAGACATCAACAACAGAAACAAAACTGCTTCCTCTGACCAGCAGGAAATTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CAA 90 bp | CACCTGGAAATTTCCTGCTGGTCAGAGGAAGCAGTTTTGTTTCTGTaGTTGATGTCTTGGTTGAGGGAGGGGCTCCAGGTGATTGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: HLEISCWSEEAVLFL*LMSWLREGLQVIVA Trigger: TGCTACAATCACCTGGAGCCCCTCCCTCAACCAAGACATCAACAACAGAAACAAAACTGCTTCCTCTGACCAGCAGGAAATTTCCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CCA 72 bp | AACCAGCTTGCAAAATTCCTATTTAACCAGAGTCTCTaGCAAGTCACCACCAGCTGGCTCCAGCCAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: NQLAKFLFNQSL*QVTTSWLQPTS Trigger: AGAAGTTGGCTGGAGCCAGCTGGTGGTGACTTGCCAGAGACTCTGGTTAAATAGGAATTTTGCAAGCTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442416.1 ENST00000606673.1 |
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| CDS CAA 90 bp | GGGGCACTCCAGGGACTGAACAGAAACAAAGACTCTAAGAGCAAGTaGAGTCTCTCCACAACTGCACAAAGCCACATTCTTTGCCTAATT | + |
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Preference number: 6 (lower is better) Translates to: GALQGLNRNKDSKSK*SLSTTAQSHILCLI Trigger: AATTAGGCAAAGAATGTGGCTTTGTGCAGTTGTGGAGAGACTCAACTTGCTCTTAGAGTCTTTGTTTCTGTTCAGTCCCTGGAGTGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CCA 72 bp | GTGTTTTCATTGGTACTAAGAGGAGCAGGTAAGCTGTaGACTACTGGTAAGCTGCTGGAGGCAAGACTTGAT | + |
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Preference number: 6 (lower is better) Translates to: VFSLVLRGAGKL*TTGKLLEARLD Trigger: ATCAAGTCTTGCCTCCAGCAGCTTACCAGTAGTCCACAGCTTACCTGCTCCTCTTAGTACCAATGAAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606673.1 |
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| CDS CCA 72 bp | TTTGCTTTAATGAGAGAGACAAAGGGAGAGGAGAGATaGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: FALMRETKGEER*TERERERERER Trigger: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCCATCTCTCCTCTCCCTTTGTCTCTCTCATTAAAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CCA 72 bp | TGGTTCCATTTCAGCCCAGAAATGATGAGACTAGCCTaGGATTTGCTACTTTTCCCATTCCTCCTGCTATGT | + |
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Preference number: 6 (lower is better) Translates to: WFHFSPEMMRLA*DLLLFPFLLLC Trigger: ACATAGCAGGAGGAATGGGAAAAGTAGCAAATCCCAGGCTAGTCTCATCATTTCTGGGCTGAAATGGAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CAA 72 bp | GTTGAGTCTCTCCACAACTGCACAAAGCCACATTCTTaGCCTAATTACTTAAGCCAGAGTGTGTTCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: VESLHNCTKPHS*PNYLSQSVFTW Trigger: CCAGGTGAACACACTCTGGCTTAAGTAATTAGGCAAAGAATGTGGCTTTGTGCAGTTGTGGAGAGACTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CAA 90 bp | GAGCAGGTAAGCTGTGGACTACTGGTAAGCTGCTGGAGGCAAGACTaGATTTGTAGTATTTGCCAATTTCTGGGTTATAAATACTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: EQVSCGLLVSCWRQD*ICSICQFLGYKYSH Trigger: GTGGGAGTATTTATAACCCAGAAATTGGCAAATACTACAAATCAAGTCTTGCCTCCAGCAGCTTACCAGTAGTCCACAGCTTACCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606673.1 |
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| CDS TCA 72 bp | CCTGCTGCATTTGGTGGCTTAAAGTTCTTAAAGTTCTaGGGGAGTCTTTGGCCAAAGAATGGAATCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PAAFGGLKFLKF*GSLWPKNGIRK Trigger: TTTCCTGATTCCATTCTTTGGCCAAAGACTCCCTCAGAACTTTAAGAACTTTAAGCCACCAAATGCAGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CCA 72 bp | TCTTTGCCTAATTACTTAAGCCAGAGTGTGTTCACCTaGAAATTTCCTGCTGGTCAGAGGAAGCAGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLPNYLSQSVFT*KFPAGQRKQFC Trigger: ACAAAACTGCTTCCTCTGACCAGCAGGAAATTTCCAGGTGAACACACTCTGGCTTAAGTAATTAGGCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CAA 72 bp | CATTTCAGCCCAGAAATGATGAGACTAGCCTGGGATTaGCTACTTTTCCCATTCCTCCTGCTATGTTATTTG | + |
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Preference number: 6 (lower is better) Translates to: HFSPEMMRLAWD*LLFPFLLLCYL Trigger: CAAATAACATAGCAGGAGGAATGGGAAAAGTAGCAAATCCCAGGCTAGTCTCATCATTTCTGGGCTGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS TCA 72 bp | CACCACATGGATGAACCTCAAATGCGTTATGCTGAGTaGGTAAATCCAGACTCAAAAGACTACACATTGTGT | + |
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Preference number: 6 (lower is better) Translates to: HHMDEPQMRYAE*VNPDSKDYTLC Trigger: ACACAATGTGTAGTCTTTTGAGTCTGGATTTACTCACTCAGCATAACGCATTTGAGGTTCATCCATGTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442416.1 |
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| CDS TCA 72 bp | AGAATGGAATCAGGAAAGGTGCCTTGGTATGTAAAATaGGCTGAATCAACAACAGTGGAAGGAATGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RMESGKVPWYVK*AESTTVEGMQE Trigger: TTCCTGCATTCCTTCCACTGTTGTTGATTCAGCTCATTTTACATACCAAGGCACCTTTCCTGATTCCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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| CDS CAA 72 bp | AGCTGTGGACTACTGGTAAGCTGCTGGAGGCAAGACTaGATTTGTAGTATTTGCCAATTTCTGGGTTATAAA | + |
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Preference number: 6 (lower is better) Translates to: SCGLLVSCWRQD*ICSICQFLGYK Trigger: TTTATAACCCAGAAATTGGCAAATACTACAAATCAAGTCTTGCCTCCAGCAGCTTACCAGTAGTCCACAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606673.1 |
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| CDS TCA 72 bp | TACAAACTTGCTTTCACTTTACTCTGTGGATTCGCCTaGAATTCTTTGTTGTGTGAGATCCAAGATCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: YKLAFTLLCGFA*NSLLCEIQDPS Trigger: AGAAGGATCTTGGATCTCACACAACAAAGAATTTCAGGCGAATCCACAGAGTAAAGTGAAAGCAAGTTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607654.1 |
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