Pregenerated sensors for LINC02830 (Homo sapiens)

Ensembl gene IDs: ENSG00000224899

Ensembl transcript IDs: ENST00000454957.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AAATCCAGTGAGATTCAACAAATTGTCAAGTTACACACTTCTGAATaGCAGATTTGGGACCAGAAGCTAGACCTCAGGTATCTGATGGTG	+
Preference number: 5 (lower is better) Translates to: KSSEIQQIVKLHTSE*QIWDQKLDLRYLMV Trigger: CACCATCAGATACCTGAGGTCTAGCTTCTGGTCCCAAATCTGTCATTCAGAAGTGTGTAACTTGACAATTTGTTGAATCTCACTGGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454957.1
CDS TCA 90 bp	GGGATTCAAGTTCCAACTTTGCAGCTTATTACCTCCACCACTTTTTaGGGTACTGCTATGTCTCAGCATAATTCTTATCTGGTTAATTTT	+
Preference number: 5 (lower is better) Translates to: GIQVPTLQLITSTTF*GTAMSQHNSYLVNF Trigger: AAAATTAACCAGATAAGAATTATGCTGAGACATAGCAGTACCTCAAAAAGTGGTGGAGGTAATAAGCTGCAAAGTTGGAACTTGAATCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454957.1
CDS TCA 72 bp	CTTGCACATTTACCACAAGGAAGGGCATGTAGTAGCTaGAGCAAACTTCCTCAGCTTTCAGGTAGTAATCTT	+
Preference number: 6 (lower is better) Translates to: LAHLPQGRACSS*SKLPQLSGSNL Trigger: AAGATTACTACCTGAAAGCTGAGGAAGTTTGCTTCAGCTACTACATGCCCTTCCTTGTGGTAAATGTGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454957.1
CDS CAA 72 bp	TTCCTCAGCTTTCAGGTAGTAATCTTCCAACTACTGTaGGCAGCAATGCAGATTGTCAAATGCACACCTAAA	+
Preference number: 6 (lower is better) Translates to: FLSFQVVIFQLL*AAMQIVKCTPK Trigger: TTTAGGTGTGCATTTGACAATCTGCATTGCTGCCAACAGTAGTTGGAAGATTACTACCTGAAAGCTGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454957.1
CDS TCA 72 bp	GAGATTCAACAAATTGTCAAGTTACACACTTCTGAATaGCAGATTTGGGACCAGAAGCTAGACCTCAGGTAT	+
Preference number: 6 (lower is better) Translates to: EIQQIVKLHTSE*QIWDQKLDLRY Trigger: ATACCTGAGGTCTAGCTTCTGGTCCCAAATCTGTCATTCAGAAGTGTGTAACTTGACAATTTGTTGAATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454957.1
CDS TCA 72 bp	GTTCCAACTTTGCAGCTTATTACCTCCACCACTTTTTaGGGTACTGCTATGTCTCAGCATAATTCTTATCTG	+
Preference number: 6 (lower is better) Translates to: VPTLQLITSTTF*GTAMSQHNSYL Trigger: CAGATAAGAATTATGCTGAGACATAGCAGTACCTCAAAAAGTGGTGGAGGTAATAAGCTGCAAAGTTGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454957.1
CDS CAA 90 bp	GAAGCAAACTTCCTCAGCTTTCAGGTAGTAATCTTCCAACTACTGTaGGCAGCAATGCAGATTGTCAAATGCACACCTAAACTTAAAATT	+
Preference number: 6 (lower is better) Translates to: EANFLSFQVVIFQLL*AAMQIVKCTPKLKI Trigger: AATTTTAAGTTTAGGTGTGCATTTGACAATCTGCATTGCTGCCAACAGTAGTTGGAAGATTACTACCTGAAAGCTGAGGAAGTTTGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454957.1

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