Pregenerated sensors for LINC02826 (Homo sapiens)
Ensembl gene IDs: ENSG00000275212Ensembl transcript IDs: ENST00000534849.1, ENST00000620193.1, ENST00000642407.1, ENST00000653364.1, ENST00000653418.1, ENST00000659525.1, ENST00000660252.1, ENST00000661236.1, ENST00000665464.1, ENST00000665882.1, ENST00000668594.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTTCCTCACATGGGGCACCACCTGCCTGGTCTGTCCCACAGACCCTaGCCGATGGATGAAGCGAGTACTCAGAGACAGGTATGCAGCATA | + |
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Preference number: 5 (lower is better) Translates to: VPHMGHHLPGLSHRP*PMDEASTQRQVCSI Trigger: TATGCTGCATACCTGTCTCTGAGTACTCGCTTCATCCATCGGCCAGGGTCTGTGGGACAGACCAGGCAGGTGGTGCCCCATGTGAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 |
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| CDS TCA 90 bp | GGAGTGAATGGTGTCTGTGCCTGGAGCAGGATTTGCTTGGCCTCCTaGGTTGTCTTCTTCAGCATCCCCCAGGTAATGTCCAGGGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: GVNGVCAWSRICLAS*VVFFSIPQVMSRAC Trigger: ACAGGCCCTGGACATTACCTGGGGGATGCTGAAGAAGACAACTCAGGAGGCCAAGCAAATCCTGCTCCAGGCACAGACACCATTCACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS TCA 90 bp | GAAGCGAGTACTCAGAGACAGGTATGCAGCATAACAGCAGCTAGGTaGCTGCCTGGCTCTAGTGGCCAGAGAGCAGCCCTGAGAAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: EASTQRQVCSITAAR*LPGSSGQRAALRSW Trigger: CCAACTTCTCAGGGCTGCTCTCTGGCCACTAGAGCCAGGCAGTCACCTAGCTGCTGTTATGCTGCATACCTGTCTCTGAGTACTCGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 |
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| CDS GCA 90 bp | GGCTCGCTCCATGCCATGTCCTGGTTCCTGTGGCTCTGCCCATTATaGCTTGATGTTTATTGGACATCACTCCACCCCACTCAGTCACCC | + |
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Preference number: 5 (lower is better) Translates to: GSLHAMSWFLWLCPL*LDVYWTSLHPTQSP Trigger: GGGTGACTGAGTGGGGTGGAGTGATGTCCAATAAACATCAAGGCATAATGGGCAGAGCCACAGGAACCAGGACATGGCATGGAGCGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534849.1 ENST00000660252.1 |
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| CDS TCA 90 bp | CCGTCCCATTCCTTGGGTGTTCTCCAGTTCTGGAGGCTGGAAGTGTaGGCTCAGGTGTTGGCAGGGTTGATTTCTTCTGAGACCCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PSHSLGVLQFWRLEV*AQVLAGLISSETPH Trigger: ATGAGGGGTCTCAGAAGAAATCAACCCTGCCAACACCTGAGCTCACACTTCCAGCCTCCAGAACTGGAGAACACCCAAGGAATGGGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534849.1 |
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| CDS GCA 90 bp | CTGCCTGGCTCTAGTGGCCAGAGAGCAGCCCTGAGAAGTTGGAGCTaGTTGTTTTTATTCAGTGCAGGCACAATGCCGATAACCTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LPGSSGQRAALRSWS*LFLFSAGTMPITWS Trigger: GCTCCAGGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCTGCTCTCTGGCCACTAGAGCCAGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000642407.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 |
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| CDS TCA 90 bp | TCCAGTTCTGGAGGCTGGAAGTGTGAGCTCAGGTGTTGGCAGGGTTaGTTTCTTCTGAGACCCCTCATCCTGGCTTGCAGATGGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SSSGGWKCELRCWQG*FLLRPLILACRWCL Trigger: AAGACACCATCTGCAAGCCAGGATGAGGGGTCTCAGAAGAAATCAACCCTGCCAACACCTGAGCTCACACTTCCAGCCTCCAGAACTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534849.1 |
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| CDS TCA 90 bp | ATAGAGGTGGCATGGAATCCCAGCCCATCATCACCACAGGGACTTTaGGCGCGTTGCTTAGCCAGGTTGAGCTGCCTTCTTTTCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: IEVAWNPSPSSPQGL*ARCLARLSCLLFSC Trigger: ACAGGAGAAAAGAAGGCAGCTCAACCTGGCTAAGCAACGCGCTCAAAGTCCCTGTGGTGATGATGGGCTGGGATTCCATGCCACCTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS TCA 90 bp | CACAGTTCTGGAGGCTGGAAGTGTGAGCTCAGGTGTTGGCAGGGTTaGTTTCTTCTGAGACCCCTCATCCTGGCTTGCAGATGGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: HSSGGWKCELRCWQG*FLLRPLILACRWCL Trigger: AAGACACCATCTGCAAGCCAGGATGAGGGGTCTCAGAAGAAATCAACCCTGCCAACACCTGAGCTCACACTTCCAGCCTCCAGAACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS TCA 90 bp | CTAAGTTCTGGAGGCTGGAAGTGTGAGCTCAGGTGTTGGCAGGGTTaGTTTCTTCTGAGACCCCTCATCCTGGCTTGCAGATGGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: LSSGGWKCELRCWQG*FLLRPLILACRWCL Trigger: AAGACACCATCTGCAAGCCAGGATGAGGGGTCTCAGAAGAAATCAACCCTGCCAACACCTGAGCTCACACTTCCAGCCTCCAGAACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642407.1 |
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| CDS GCA 90 bp | ATCCTTTGCCATGTGGCTTTGCAGCTCCTCGTGCTAGAGGAGAACTaGCTTTCCCCATCTGATGCTGGACATGGCCATATGGGTTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: ILCHVALQLLVLEEN*LSPSDAGHGHMGCF Trigger: AAAGCAACCCATATGGCCATGTCCAGCATCAGATGGGGAAAGGCAGTTCTCCTCTAGCACGAGGAGCTGCAAAGCCACATGGCAAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS GCA 90 bp | CTGCCTGGCTCTAGTGGCCAGAGAGCAGCCCTGAGAAGTTGGAGCTaGTTGTTTTTATTCAGTGCAGGCACAATGCCGATAACCTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: LPGSSGQRAALRSWS*LFLFSAGTMPITCD Trigger: ATCACAGGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCTGCTCTCTGGCCACTAGAGCCAGGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653364.1 |
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| CDS GCA 90 bp | CCAGAGAGCAGCCCTGAGAAGTTGGAGCTGCTTGTTTTTATTCAGTaGAGGCACAATGCCGATAACTTGAGGTTGAAGGAAATGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PESSPEKLELLVFIQ*RHNADNLRLKEMPR Trigger: CCTGGGCATTTCCTTCAACCTCAAGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCTGCTCTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665882.1 |
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| CDS GCA 90 bp | CCAGAGAGCAGCCCTGAGAAGTTGGAGCTGCTTGTTTTTATTCAGTaGAGGCACAATGCCGATAACCTGGAGCAAACACAACCACACTGT | + |
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Preference number: 5 (lower is better) Translates to: PESSPEKLELLVFIQ*RHNADNLEQTQPHC Trigger: ACAGTGTGGTTGTGTTTGCTCCAGGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCTGCTCTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665464.1 |
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| CDS GCA 90 bp | CCAGAGAGCAGCCCTGAGAAGTTGGAGCTGCTTGTTTTTATTCAGTaGAGGCACAATGCCGATAACCTGGAGCAAACACAACTTGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: PESSPEKLELLVFIQ*RHNADNLEQTQLEV Trigger: AACCTCAAGTTGTGTTTGCTCCAGGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCTGCTCTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653418.1 |
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| CDS GCA 90 bp | CCAGAGAGCAGCCCTGAGAAGTTGGAGCTGCTTGTTTTTATTCAGTaGAGGCACAATGCCGATAACCTGGAGCAAACACAACCTGTGATA | + |
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Preference number: 5 (lower is better) Translates to: PESSPEKLELLVFIQ*RHNADNLEQTQPVI Trigger: TATCACAGGTTGTGTTTGCTCCAGGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCTGCTCTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659525.1 |
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| CDS CCA 90 bp | ACAAGCAGCGCTTATCAGATGAAGCACCTACTTATGTCGAATGAATaGCAGCTTCCTGGAGTGAATGGTGTCTGTGCCTGGAGCAGGATT | + |
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Preference number: 5 (lower is better) Translates to: TSSAYQMKHLLMSNE*QLPGVNGVCAWSRI Trigger: AATCCTGCTCCAGGCACAGACACCATTCACTCCAGGAAGCTGCCATTCATTCGACATAAGTAGGTGCTTCATCTGATAAGCGCTGCTTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CCA 90 bp | TGGAGCTGCTTGTTTTTATTCAGTGCAGGCACAATGCCGATAACCTaGAGCAAACACAACTTTATCTTGGCTCCAAGCAGAATCGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: WSCLFLFSAGTMPIT*SKHNFILAPSRIGV Trigger: GACCCCGATTCTGCTTGGAGCCAAGATAAAGTTGTGTTTGCTCCAGGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000642407.1 ENST00000661236.1 |
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| CDS GCA 90 bp | CTTGTTCTCCTCTGTGAAAACAAAGGGATGTTGCTCTCCTTCAAATaGAGCCCCAAGTATGCATGCTGCTATCTGCCTTCTCTGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: LVLLCENKGMLLSFK*SPKYACCYLPSLSL Trigger: CAATGACAGAGAAGGCAGATAGCAGCATGCATACTTGGGGCTGCATTTGAAGGAGAGCAACATCCCTTTGTTTTCACAGAGGAGAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS GCA 90 bp | CCAGAGAGCAGCCCTGAGAAGTTGGAGCTGCTTGTTTTTATTCAGTaGAGGCACAATGCCGATAACCTGGAGCAAACACAACTTTATCTT | + |
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Preference number: 5 (lower is better) Translates to: PESSPEKLELLVFIQ*RHNADNLEQTQLYL Trigger: AAGATAAAGTTGTGTTTGCTCCAGGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCTGCTCTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000642407.1 ENST00000661236.1 |
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| CDS CCA 90 bp | TGGAGCTGCTTGTTTTTATTCAGTGCAGGCACAATGCCGATAACCTaGAGCAAACACAACTTGAGGTTGAAGGAAATGCCCAGGATGGTA | + |
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Preference number: 5 (lower is better) Translates to: WSCLFLFSAGTMPIT*SKHNLRLKEMPRMV Trigger: TACCATCCTGGGCATTTCCTTCAACCTCAAGTTGTGTTTGCTCCAGGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653418.1 |
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| CDS GCA 90 bp | AAAGGGATGTTGCTCTCCTTCAAATGCAGCCCCAAGTATGCATGCTaGTATCTGCCTTCTCTGTCATTGATAAATTACACAAGCAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: KGMLLSFKCSPKYAC*YLPSLSLINYTSSA Trigger: AGCGCTGCTTGTGTAATTTATCAATGACAGAGAAGGCAGATAGCAGCATGCATACTTGGGGCTGCATTTGAAGGAGAGCAACATCCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CCA 90 bp | GGAAAGAGCCTTAATATCACTGAACTTCCGAATCAATCAACTCGGTaGCCTTTTGTAGGCTGGACTCACACTGTGCAGTCATTACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: GKSLNITELPNQSTR*PFVGWTHTVQSLQR Trigger: TCTCTGTAATGACTGCACAGTGTGAGTCCAGCCTACAAAAGGCCACCGAGTTGATTGATTCGGAAGTTCAGTGATATTAAGGCTCTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653364.1 ENST00000653418.1 ENST00000665882.1 |
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| CDS GCA 90 bp | AACAAAGGGATGTTGCTCTCCTTCAAATGCAGCCCCAAGTATGCATaGTGCTATCTGCCTTCTCTGTCATTGATAAATTACACAAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: NKGMLLSFKCSPKYA*CYLPSLSLINYTSS Trigger: GCTGCTTGTGTAATTTATCAATGACAGAGAAGGCAGATAGCAGCATGCATACTTGGGGCTGCATTTGAAGGAGAGCAACATCCCTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CCA 90 bp | ATCACTGAACTTCCGAATCAATCAACTCGGTGGCCTTTTGTAGGCTaGACTCACACTGTGCAGTCATTACAGAGAATAATGCAAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: ITELPNQSTRWPFVG*THTVQSLQRIMQMS Trigger: GGACATTTGCATTATTCTCTGTAATGACTGCACAGTGTGAGTCCAGCCTACAAAAGGCCACCGAGTTGATTGATTCGGAAGTTCAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653364.1 ENST00000653418.1 ENST00000665882.1 |
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| CDS GCA 90 bp | AGTGTGTCAGAAGCCAAATCTGTGATAATAATCCTAGCATACAAGTaGGGGACACTTTACTGTGTCAACAGTAAGTTGGGCCAGTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SVSEAKSVIIILAYK*GTLYCVNSKLGQCS Trigger: ACTACACTGGCCCAACTTACTGTTGACACAGTAAAGTGTCCCGCACTTGTATGCTAGGATTATTATCACAGATTTGGCTTCTGACACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661236.1 |
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| CDS CCA 90 bp | TATAAAATGACTTTACACGACACTAGTGATAGGACCACCACAATCTaGGAAGCACCGTCTAAGCTGAGCTCCATGGCTAAAATTGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: YKMTLHDTSDRTTTI*EAPSKLSSMAKIED Trigger: ATCTTCAATTTTAGCCATGGAGCTCAGCTTAGACGGTGCTTCCCAGATTGTGGTGGTCCTATCACTAGTGTCGTGTAAAGTCATTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS TCA 90 bp | TCTGTGTCCTCATCTCCTCTTAACAAGGATACCAGTCGTATTGGATaGGGGTCCACCCTAACAACCTCATTTTACCTTAATTATCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SVSSSPLNKDTSRIG*GSTLTTSFYLNYLF Trigger: AAAGAGATAATTAAGGTAAAATGAGGTTGTTAGGGTGGACCCTCATCCAATACGACTGGTATCCTTGTTAAGAGGAGATGAGGACACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS CCA 90 bp | CTCTTTAAAGACCTTGTCTCCAAATATATTCACACTCTAAAGTACTaGGGAATTAGGGCTTCAATACATAAATTGGTGGAGGGGAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LFKDLVSKYIHTLKY*GIRASIHKLVEGSA Trigger: TGCACTCCCCTCCACCAATTTATGTATTGAAGCCCTAATTCCCCAGTACTTTAGAGTGTGAATATATTTGGAGACAAGGTCTTTAAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS TCA 72 bp | GCGGCGGGCGCCTGTGGTCCCAGCTACCGGGGAGGCTaGGGCAGGAGAATGGCGGGAACCCGGGAGGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: AAGACGPSYRGG*GRRMAGTREAE Trigger: CTCCGCCTCCCGGGTTCCCGCCATTCTCCTGCCTCAGCCTCCCCGGTAGCTGGGACCACAGGCGCCCGCCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS GCA 72 bp | AGGCAGGAGAATGGCGGGAACCCGGGAGGCGGAGCTTaGAGTGATCGCGTCACTGCACTCCAGCCTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: RQENGGNPGGGA*SDRVTALQPGG Trigger: TCCCCCAGGCTGGAGTGCAGTGACGCGATCACTGCAAGCTCCGCCTCCCGGGTTCCCGCCATTCTCCTGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS CCA 72 bp | ATGGGGCACCACCTGCCTGGTCTGTCCCACAGACCCTaGCCGATGGATGAAGCGAGTACTCAGAGACAGGTA | + |
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Preference number: 6 (lower is better) Translates to: MGHHLPGLSHRP*PMDEASTQRQV Trigger: TACCTGTCTCTGAGTACTCGCTTCATCCATCGGCCAGGGTCTGTGGGACAGACCAGGCAGGTGGTGCCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 |
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| CDS CCA 72 bp | ACCACCTGCCTGGTCTGTCCCACAGACCCTGGCCGATaGATGAAGCGAGTACTCAGAGACAGGTATGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TTCLVCPTDPGR*MKRVLRDRYAA Trigger: TGCTGCATACCTGTCTCTGAGTACTCGCTTCATCCATCGGCCAGGGTCTGTGGGACAGACCAGGCAGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 |
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| CDS TCA 72 bp | ACTCAGAGACAGGTATGCAGCATAACAGCAGCTAGGTaGCTGCCTGGCTCTAGTGGCCAGAGAGCAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: TQRQVCSITAAR*LPGSSGQRAAL Trigger: CAGGGCTGCTCTCTGGCCACTAGAGCCAGGCAGTCACCTAGCTGCTGTTATGCTGCATACCTGTCTCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 |
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| CDS CAA 90 bp | GGCATGGAATCCCAGCCCATCATCACCACAGGGACTTTGAGCGCGTaGCTTAGCCAGGTTGAGCTGCCTTCTTTTCTCCTGTCAACTGGG | + |
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Preference number: 6 (lower is better) Translates to: GMESQPIITTGTLSA*LSQVELPSFLLSTG Trigger: CCCAGTTGACAGGAGAAAAGAAGGCAGCTCAACCTGGCTAAGCAACGCGCTCAAAGTCCCTGTGGTGATGATGGGCTGGGATTCCATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS TCA 72 bp | GGAGGCTGGAAGTGTGAGCTCAGGTGTTGGCAGGGTTaGTTTCTTCTGAGACCCCTCATCCTGGCTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GGWKCELRCWQG*FLLRPLILACR Trigger: TCTGCAAGCCAGGATGAGGGGTCTCAGAAGAAATCAACCCTGCCAACACCTGAGCTCACACTTCCAGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000534849.1 ENST00000642407.1 ENST00000660252.1 |
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| CDS TCA 72 bp | GGTGTCTGTGCCTGGAGCAGGATTTGCTTGGCCTCCTaGGTTGTCTTCTTCAGCATCCCCCAGGTAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: GVCAWSRICLAS*VVFFSIPQVMS Trigger: GGACATTACCTGGGGGATGCTGAAGAAGACAACTCAGGAGGCCAAGCAAATCCTGCTCCAGGCACAGACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS TCA 72 bp | GCTCCTCGTGCTAGAGGAGAACTGCCTTTCCCCATCTaGTGCTGGACATGGCCATATGGGTTGCTTTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: APRARGELPFPI*CWTWPYGLLWW Trigger: CCACCAAAGCAACCCATATGGCCATGTCCAGCATCAGATGGGGAAAGGCAGTTCTCCTCTAGCACGAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CAA 72 bp | GTACCGGGTTGGGTCCTAGCCATGCCATGGTATGGTTaGATGCCTCGTGCTGGAATCCAAAGAGGACCTGAC | + |
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Preference number: 6 (lower is better) Translates to: VPGWVLAMPWYG*MPRAGIQRGPD Trigger: GTCAGGTCCTCTTTGGATTCCAGCACGAGGCATCAAACCATACCATGGCATGGCTAGGACCCAACCCGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000620193.1 |
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| CDS CAA 72 bp | TCCCAGCCCATCATCACCACAGGGACTTTGAGCGCGTaGCTTAGCCAGGTTGAGCTGCCTTCTTTTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SQPIITTGTLSA*LSQVELPSFLL Trigger: CAGGAGAAAAGAAGGCAGCTCAACCTGGCTAAGCAACGCGCTCAAAGTCCCTGTGGTGATGATGGGCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS CAA 90 bp | GATAGAGGTGGCATGGAATCCCAGCCCATCATCACCACAGGGACTTaGAGCGCGTTGCTTAGCCAGGTTGAGCTGCCTTCTTTTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: DRGGMESQPIITTGT*SALLSQVELPSFLL Trigger: CAGGAGAAAAGAAGGCAGCTCAACCTGGCTAAGCAACGCGCTCAAAGTCCCTGTGGTGATGATGGGCTGGGATTCCATGCCACCTCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS TCA 72 bp | GGTGACTGCCTGGCTCTAGTGGCCAGAGAGCAGCCCTaGGAAGTTGGAGCTGCTTGTTTTTATTCAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GDCLALVAREQP*EVGAACFYSVQ Trigger: CTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCTGCTCTCTGGCCACTAGAGCCAGGCAGTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 |
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| CDS CCA 72 bp | CTTTCCTCTGTACATGTCTGTGTCCTCATCTCCTTGTaGGAGAGGTCTCTCCGTTGGCCACGCCCATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSVHVCVLISL*ERSLRWPRPFL Trigger: CAGAAATGGGCGTGGCCAACGGAGAGACCTCTCCCACAAGGAGATGAGGACACAGACATGTACAGAGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534849.1 |
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| CDS CCA 72 bp | TTTGGTACCGGGTTGGGTCCTAGCCATGCCATGGTATaGTTTGATGCCTCGTGCTGGAATCCAAAGAGGACC | + |
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Preference number: 6 (lower is better) Translates to: FGTGLGPSHAMV*FDASCWNPKRT Trigger: GGTCCTCTTTGGATTCCAGCACGAGGCATCAAACCATACCATGGCATGGCTAGGACCCAACCCGGTACCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000620193.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CAA 72 bp | GCAGGGTTGATTTCTTCTGAGACCCCTCATCCTGGCTaGCAGATGGTGTCTTCTCCTGTGGGAGAGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: AGLISSETPHPG*QMVSSPVGEVS Trigger: AGAGACCTCTCCCACAGGAGAAGACACCATCTGCAAGCCAGGATGAGGGGTCTCAGAAGAAATCAACCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642407.1 |
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| CDS CAA 90 bp | ATGGCAGCTTCCTGGAGTGAATGGTGTCTGTGCCTGGAGCAGGATTaGCTTGGCCTCCTGAGTTGTCTTCTTCAGCATCCCCCAGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: MAASWSEWCLCLEQD*LGLLSCLLQHPPGN Trigger: ATTACCTGGGGGATGCTGAAGAAGACAACTCAGGAGGCCAAGCAAATCCTGCTCCAGGCACAGACACCATTCACTCCAGGAAGCTGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS TCA 72 bp | TCCTTGGGTGTTCTCCAGTTCTGGAGGCTGGAAGTGTaGGCTCAGGTGTTGGCAGGGTTGATTTCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLGVLQFWRLEV*AQVLAGLISSE Trigger: CTCAGAAGAAATCAACCCTGCCAACACCTGAGCTCACACTTCCAGCCTCCAGAACTGGAGAACACCCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534849.1 |
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| CDS TCA 72 bp | GTGTCAGCACTCTTGCAGATACCGGGATTGTTGAGGTaGACAAAACAGATATGGTCCCCACCCTCAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VSALLQIPGLLR*TKQIWSPPSGR Trigger: CCTGCCTGAGGGTGGGGACCATATCTGTTTTGTTCACCTCAACAATCCCGGTATCTGCAAGAGTGCTGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS CCA 72 bp | ACTGCCTTTCCCCATCTGATGCTGGACATGGCCATATaGGTTGCTTTGGTGGATGGAATGTGGACAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TAFPHLMLDMAI*VALVDGMWTEQ Trigger: CTGCTCTGTCCACATTCCATCCACCAAAGCAACCCATATGGCCATGTCCAGCATCAGATGGGGAAAGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CCA 72 bp | CCTGGCTCTAGTGGCCAGAGAGCAGCCCTGAGAAGTTaGAGCTGCTTGTTTTTATTCAGTGCAGGCACAATG | + |
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Preference number: 6 (lower is better) Translates to: PGSSGQRAALRS*SCLFLFSAGTM Trigger: CATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCTGCTCTCTGGCCACTAGAGCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 |
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| CDS CAA 72 bp | GCAGGGTTGATTTCTTCTGAGACCCCTCATCCTGGCTaGCAGATGGTGTCTTCTCCCTGCGTTTTCACATGG | + |
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Preference number: 6 (lower is better) Translates to: AGLISSETPHPG*QMVSSPCVFTW Trigger: CCATGTGAAAACGCAGGGAGAAGACACCATCTGCAAGCCAGGATGAGGGGTCTCAGAAGAAATCAACCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534849.1 ENST00000660252.1 |
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| CDS CAA 90 bp | ACTGCCTTTCCCCATCTGATGCTGGACATGGCCATATGGGTTGCTTaGGTGGATGGAATGTGGACAGAGCAGCAGGTTTCTGATCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TAFPHLMLDMAIWVA*VDGMWTEQQVSDLD Trigger: ATCCAGATCAGAAACCTGCTGCTCTGTCCACATTCCATCCACCAAAGCAACCCATATGGCCATGTCCAGCATCAGATGGGGAAAGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS TCA 72 bp | TGGTTTGATGCCTCGTGCTGGAATCCAAAGAGGACCTaGCGGGGTGTGAACACAAGCATATCCTCTTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: WFDASCWNPKRT*RGVNTSISSFP Trigger: TGGGAAAGAGGATATGCTTGTGTTCACACCCCGTCAGGTCCTCTTTGGATTCCAGCACGAGGCATCAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620193.1 |
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| CDS TCA 72 bp | TTGGGTGTTCTCCCTAAGTTCTGGAGGCTGGAAGTGTaGGCTCAGGTGTTGGCAGGGTTGATTTCTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LGVLPKFWRLEV*AQVLAGLISSE Trigger: CTCAGAAGAAATCAACCCTGCCAACACCTGAGCTCACACTTCCAGCCTCCAGAACTTAGGGAGAACACCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642407.1 |
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| CDS CAA 72 bp | CGGGATTGTGGGTCCTGTAGGGTCATTTTCTTCATTTaGGTACCGGGTTGGGTCCTAGCCATGCCATGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: RDCGSCRVIFFI*VPGWVLAMPWY Trigger: ATACCATGGCATGGCTAGGACCCAACCCGGTACCAAAATGAAGAAAATGACCCTACAGGACCCACAATCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CAA 90 bp | TTTCTAAGTCCTCCTTGGTTCAAGAGTTTTCTTCTCCATGTCCTCTaGACAGCACCGTCCCATTCCTTGGGTGTTCTCCAGTTCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLSPPWFKSFLLHVL*TAPSHSLGVLQFWR Trigger: CCTCCAGAACTGGAGAACACCCAAGGAATGGGACGGTGCTGTCAAGAGGACATGGAGAAGAAAACTCTTGAACCAAGGAGGACTTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534849.1 |
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| CDS CCA 72 bp | TTTGGTACCGGGTTGGGTCCTAGCCATGCCATGGTATaGTTTGATGCCTCGTGCTTAGTTTTCCAAATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FGTGLGPSHAMV*FDASCLVFQIQ Trigger: CTGAATTTGGAAAACTAAGCACGAGGCATCAAACCATACCATGGCATGGCTAGGACCCAACCCGGTACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642407.1 |
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| CDS CCA 72 bp | ACTTTACACGACACTAGTGATAGGACCACCACAATCTaGGAAGCACCGTCTAAGCTGAGCTCCATGGCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: TLHDTSDRTTTI*EAPSKLSSMAK Trigger: TTTAGCCATGGAGCTCAGCTTAGACGGTGCTTCCCAGATTGTGGTGGTCCTATCACTAGTGTCGTGTAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS CAA 90 bp | TTTCTAAGTCCTCCTTGGTTCAAGAGTTTTCTTCTCCATGTCCTCTaGACAGCACCGTCCCATTCCTTGGGTGTTCTCCCTAAGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLSPPWFKSFLLHVL*TAPSHSLGVLPKFW Trigger: CCAGAACTTAGGGAGAACACCCAAGGAATGGGACGGTGCTGTCAAGAGGACATGGAGAAGAAAACTCTTGAACCAAGGAGGACTTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642407.1 |
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| CDS GCA 72 bp | CTCTGTGAAAACAAAGGGATGTTGCTCTCCTTCAAATaGAGCCCCAAGTATGCATGCTGCTATCTGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LCENKGMLLSFK*SPKYACCYLPS Trigger: AGAAGGCAGATAGCAGCATGCATACTTGGGGCTGCATTTGAAGGAGAGCAACATCCCTTTGTTTTCACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CCA 72 bp | CCTAGCCATGCCATGGTATGGTTTGATGCCTCGTGCTaGAATCCAAAGAGGACCTTAGTTTTCCAAATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSHAMVWFDASC*NPKRTLVFQIQ Trigger: CTGAATTTGGAAAACTAAGGTCCTCTTTGGATTCCAGCACGAGGCATCAAACCATACCATGGCATGGCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CCA 72 bp | ACAAGTGCGGGACACTTTACTGTGTCAACAGTAAGTTaGGCCAGTGTAGTGATCTTTGTTGGTAACCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSAGHFTVSTVS*ASVVIFVGNLP Trigger: GGGAAGGTTACCAACAAAGATCACTACACTGGCCCAACTTACTGTTGACACAGTAAAGTGTCCCGCACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653364.1 ENST00000659525.1 ENST00000661236.1 |
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| CDS CAA 90 bp | CTGCTTGTTTTTATTCAGTGCAGGCACAATGCCGATAACTTGAGGTaGAAGGAAATGCCCAGGATGGTAGACCAGAGAAAAGGAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLVFIQCRHNADNLR*KEMPRMVDQRKGKS Trigger: GCTCTTTCCTTTTCTCTGGTCTACCATCCTGGGCATTTCCTTCAACCTCAAGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665882.1 |
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| CDS CAA 90 bp | TTGGAGCTGCTTGTTTTTATTCAGTGCAGGCACAATGCCGATAACTaGAGGTTGAAGGAAATGCCCAGGATGGTAGACCAGAGAAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LELLVFIQCRHNADN*RLKEMPRMVDQRKG Trigger: TCCTTTTCTCTGGTCTACCATCCTGGGCATTTCCTTCAACCTCAAGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665882.1 |
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| CDS GCA 72 bp | AGCCCTGAGAAGTTGGAGCTGCTTGTTTTTATTCAGTaGAGGCACAATGCCGATAACTTGAGGTTGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SPEKLELLVFIQ*RHNADNLRLKE Trigger: TTCCTTCAACCTCAAGTTATCGGCATTGTGCCTGCACTGAATAAAAACAAGCAGCTCCAACTTCTCAGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665882.1 |
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| CDS CCA 72 bp | CTTCCGAATCAATCAACTCGGTGGCCTTTTGTAGGCTaGACTCACACTGTGCAGTCATTACAGAGAATAATG | + |
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Preference number: 6 (lower is better) Translates to: LPNQSTRWPFVG*THTVQSLQRIM Trigger: CATTATTCTCTGTAATGACTGCACAGTGTGAGTCCAGCCTACAAAAGGCCACCGAGTTGATTGATTCGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653364.1 ENST00000653418.1 ENST00000665882.1 |
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| CDS CAA 72 bp | ACAATGCCGATAACCTGGAGCAAACACAACTTTATCTaGGCTCCAAGCAGAATCGGGGTCCAGAATTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TMPITWSKHNFI*APSRIGVQNFE Trigger: CTCAAAATTCTGGACCCCGATTCTGCTTGGAGCCAAGATAAAGTTGTGTTTGCTCCAGGTTATCGGCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000642407.1 ENST00000661236.1 |
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| CDS CAA 72 bp | ACAATGCCGATAACCTGGAGCAAACACAACTTGAGGTaGAAGGAAATGCCCAGGATGGTAGACCAGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: TMPITWSKHNLR*KEMPRMVDQRK Trigger: TTTTCTCTGGTCTACCATCCTGGGCATTTCCTTCAACCTCAAGTTGTGTTTGCTCCAGGTTATCGGCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653418.1 |
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| CDS CAA 90 bp | TTTCTAAGTCCTCCTTGGTTCAAGAGTTTTCTTCTCCATGTCCTCTaGACAGCACCGTCCCATTCCTTGGGTGTTCTCCCTACTTATTTA | + |
|
Preference number: 6 (lower is better) Translates to: FLSPPWFKSFLLHVL*TAPSHSLGVLPTYL Trigger: TAAATAAGTAGGGAGAACACCCAAGGAATGGGACGGTGCTGTCAAGAGGACATGGAGAAGAAAACTCTTGAACCAAGGAGGACTTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS CCA 72 bp | TTGTTTTTATTCAGTGCAGGCACAATGCCGATAACCTaGAGCAAACACAACCACACTGTGCAGTCATTACAG | + |
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Preference number: 6 (lower is better) Translates to: LFLFSAGTMPIT*SKHNHTVQSLQ Trigger: CTGTAATGACTGCACAGTGTGGTTGTGTTTGCTCCAGGTTATCGGCATTGTGCCTGCACTGAATAAAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665464.1 |
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| CDS CAA 72 bp | TTTATTCAGTGCAGGCACAATGCCGATAACTTGAGGTaGAAGGAAATGCCCAGGATGGTAGACCAGAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FIQCRHNADNLR*KEMPRMVDQRK Trigger: TTTTCTCTGGTCTACCATCCTGGGCATTTCCTTCAACCTCAAGTTATCGGCATTGTGCCTGCACTGAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665882.1 |
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| CDS CAA 90 bp | ATTCACACTCTAAAGTACTGGGGAATTAGGGCTTCAATACATAAATaGGTGGAGGGGAGTGCAGTTCAGCTCATCACAGTGACTTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: IHTLKYWGIRASIHK*VEGSAVQLITVTYS Trigger: TGAGTAAGTCACTGTGATGAGCTGAACTGCACTCCCCTCCACCAATTTATGTATTGAAGCCCTAATTCCCCAGTACTTTAGAGTGTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS GCA 72 bp | ATGTTGCTCTCCTTCAAATGCAGCCCCAAGTATGCATaGTGCTATCTGCCTTCTCTGTCATTGATAAATTAC | + |
|
Preference number: 6 (lower is better) Translates to: MLLSFKCSPKYA*CYLPSLSLINY Trigger: GTAATTTATCAATGACAGAGAAGGCAGATAGCAGCATGCATACTTGGGGCTGCATTTGAAGGAGAGCAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000620193.1 ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS GCA 72 bp | GAAGCCAAATCTGTGATAATAATCCTAGCATACAAGTaGGGGACACTTTACTGTGTCAACAGTAAGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: EAKSVIIILAYK*GTLYCVNSKLG Trigger: GCCCAACTTACTGTTGACACAGTAAAGTGTCCCGCACTTGTATGCTAGGATTATTATCACAGATTTGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661236.1 |
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| CDS TCA 72 bp | TCATCTCCTCTTAACAAGGATACCAGTCGTATTGGATaGGGGTCCACCCTAACAACCTCATTTTACCTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSPLNKDTSRIG*GSTLTTSFYLN Trigger: ATTAAGGTAAAATGAGGTTGTTAGGGTGGACCCTCATCCAATACGACTGGTATCCTTGTTAAGAGGAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS TCA 72 bp | ATTCACTTGCTCACTCACTCATTTACGAATTGTTTTTaGGAAGCTCCTATGTGTCAGCACTCTTGCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: IHLLTHSFTNCF*EAPMCQHSCRY Trigger: GTATCTGCAAGAGTGCTGACACATAGGAGCTTCTCAAAAACAATTCGTAAATGAGTGAGTGAGCAAGTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS GCA 72 bp | TCCAAAGAGGACCTTAGTTTTCCAAATTCAGGGACGTaGATAACATCTGTTTGCCATAACTCATTAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SKEDLSFPNSGT*ITSVCHNSLGS Trigger: AGAACCTAATGAGTTATGGCAAACAGATGTTATGCACGTCCCTGAATTTGGAAAACTAAGGTCCTCTTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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| CDS CAA 72 bp | CATTCACTTGCTCACTCACTCATTTACGAATTGTTTTaGAGAAGCTCCTATGTGTCAGCACTCTTGCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: HSLAHSLIYELF*RSSYVSALLQI Trigger: TATCTGCAAGAGTGCTGACACATAGGAGCTTCTCAAAAACAATTCGTAAATGAGTGAGTGAGCAAGTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS TCA 72 bp | ATGGATGGGTGTGATGGTAATCCATCTCCTTGGCATTaGTTGGTTCATACATGGATAGATGACTTAGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: MDGCDGNPSPWH*LVHTWIDDLVF Trigger: AAATACTAAGTCATCTATCCATGTATGAACCAATCAATGCCAAGGAGATGGATTACCATCACACCCATCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653364.1 ENST00000659525.1 |
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| CDS CCA 72 bp | GACCTTGTCTCCAAATATATTCACACTCTAAAGTACTaGGGAATTAGGGCTTCAATACATAAATTGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DLVSKYIHTLKY*GIRASIHKLVE Trigger: CTCCACCAATTTATGTATTGAAGCCCTAATTCCCCAGTACTTTAGAGTGTGAATATATTTGGAGACAAGGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660252.1 |
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| CDS CAA 72 bp | AATAGAGTCAAAATCTTGTTCAGATATCTACTCCTTTaGCACAGAACCATGAGCCTTGGGGTTATCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: NRVKILFRYLLL*HRTMSLGVIFM Trigger: CATGAAGATAACCCCAAGGCTCATGGTTCTGTGCAAAAGGAGTAGATATCTGAACAAGATTTTGACTCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653364.1 ENST00000659525.1 ENST00000661236.1 |
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| CDS GCA 72 bp | AGTTTTCCAAATTCAGGGACGTGCATAACATCTGTTTaGCATAACTCATTAGGTTCTAGTCTTCTAAGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SFPNSGTCITSV*HNSLGSSLLRL Trigger: TAACCTTAGAAGACTAGAACCTAATGAGTTATGGCAAACAGATGTTATGCACGTCCCTGAATTTGGAAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000642407.1 ENST00000653364.1 ENST00000653418.1 ENST00000659525.1 ENST00000661236.1 ENST00000665464.1 ENST00000665882.1 ENST00000668594.1 |
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