Pregenerated sensors for LINC02825 (Homo sapiens)
Ensembl gene IDs: ENSG00000256494Ensembl transcript IDs: ENST00000536422.1, ENST00000619954.1
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGTCATGCAGTCATCAGCAGTCACTGGAGCTTAAATGTGGAGCCTaGAACATGCAGTCAGCAAGACTCCAAGAGTTGAGGATCTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: RSCSHQQSLELKCGA*NMQSARLQELRIWV Trigger: TACCCAGATCCTCAACTCTTGGAGTCTTGCTGACTGCATGTTCCAGGCTCCACATTTAAGCTCCAGTGACTGCTGATGACTGCATGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CCA 90 bp | GGAGCCTGGAACATGCAGTCAGCAAGACTCCAAGAGTTGAGGATCTaGGTAGCTTCCCAGAGTTCCATAGGATACAATGTTAGCACAACT | + |
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Preference number: 5 (lower is better) Translates to: GAWNMQSARLQELRI*VASQSSIGYNVSTT Trigger: AGTTGTGCTAACATTGTATCCTATGGAACTCTGGGAAGCTACCCAGATCCTCAACTCTTGGAGTCTTGCTGACTGCATGTTCCAGGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS GCA 90 bp | GAAGAAACTGAGGCCAAGAAAGGATTGAGGACATGTGTTAGGTCATaGAGTCATCAGCAGTCACTGGAGCTTAAATGTGGAGCCTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: EETEAKKGLRTCVRS*SHQQSLELKCGAWN Trigger: GTTCCAGGCTCCACATTTAAGCTCCAGTGACTGCTGATGACTGCATGACCTAACACATGTCCTCAATCCTTTCTTGGCCTCAGTTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS TCA 90 bp | AGCATTCAGAATTCACTGGTGAAGAAACTGAGGCCAAGAAAGGATTaGGGACATGTGTTAGGTCATGCAGTCATCAGCAGTCACTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: SIQNSLVKKLRPRKD*GHVLGHAVISSHWS Trigger: GCTCCAGTGACTGCTGATGACTGCATGACCTAACACATGTCCTCAATCCTTTCTTGGCCTCAGTTTCTTCACCAGTGAATTCTGAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS GCA 90 bp | TATTATTCAGGAGAGAGGAAATGGACATTTCTGCTGCTGCGGGATTaGAGGCAAAGCCACTTATTCCATTTCCCTGTATTCTTATCACCT | + |
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Preference number: 5 (lower is better) Translates to: YYSGERKWTFLLLRD*RQSHLFHFPVFLSP Trigger: AGGTGATAAGAATACAGGGAAATGGAATAAGTGGCTTTGCCTGCAATCCCGCAGCAGCAGAAATGTCCATTTCCTCTCTCCTGAATAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CCA 90 bp | GTGATGGTGACTTCGTGTATGTTCATGCTTTTACCTCGAAACTTGTaGAACCCAGTGGAGAATGTAGTATTATTCAGGAGAGAGGAAATG | + |
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Preference number: 5 (lower is better) Translates to: VMVTSCMFMLLPRNL*NPVENVVLFRREEM Trigger: CATTTCCTCTCTCCTGAATAATACTACATTCTCCACTGGGTTCCACAAGTTTCGAGGTAAAAGCATGAACATACACGAAGTCACCATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS GCA 90 bp | AAATTATTAGCATGGGTATTTCCAGTTGGAAAGAACCTGAAATATTaGCAATTCCAGCATTCAGAATTCACTGGTGAAGAAACTGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: KLLAWVFPVGKNLKY*QFQHSEFTGEETEA Trigger: GGCCTCAGTTTCTTCACCAGTGAATTCTGAATGCTGGAATTGGCAATATTTCAGGTTCTTTCCAACTGGAAATACCCATGCTAATAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CAA 72 bp | GGAGCCTGGAACATGCAGTCAGCAAGACTCCAAGAGTaGAGGATCTGGGTAGCTTCCCAGAGTTCCATAGGA | + |
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Preference number: 6 (lower is better) Translates to: GAWNMQSARLQE*RIWVASQSSIG Trigger: TCCTATGGAACTCTGGGAAGCTACCCAGATCCTCAACTCTTGGAGTCTTGCTGACTGCATGTTCCAGGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS GCA 72 bp | GGAGAGAGGAAATGGACATTTCTGCTGCTGCGGGATTaGAGGCAAAGCCACTTATTCCATTTCCCTGTATTC | + |
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Preference number: 6 (lower is better) Translates to: GERKWTFLLLRD*RQSHLFHFPVF Trigger: GAATACAGGGAAATGGAATAAGTGGCTTTGCCTGCAATCCCGCAGCAGCAGAAATGTCCATTTCCTCTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CAA 90 bp | CAGCATTCAGAATTCACTGGTGAAGAAACTGAGGCCAAGAAAGGATaGAGGACATGTGTTAGGTCATGCAGTCATCAGCAGTCACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: QHSEFTGEETEAKKG*RTCVRSCSHQQSLE Trigger: CTCCAGTGACTGCTGATGACTGCATGACCTAACACATGTCCTCAATCCTTTCTTGGCCTCAGTTTCTTCACCAGTGAATTCTGAATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CCA 72 bp | ATGTTAGCACAACTCACTCTTGGGGAAATGCATTTCTaGGTGACTTCAGGAAGCCTTGGAGGAAGTTTGCGT | + |
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Preference number: 6 (lower is better) Translates to: MLAQLTLGEMHF*VTSGSLGGSLR Trigger: ACGCAAACTTCCTCCAAGGCTTCCTGAAGTCACCCAGAAATGCATTTCCCCAAGAGTGAGTTGTGCTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CAA 72 bp | AGGAGAGAGGAAATGGACATTTCTGCTGCTGCGGGATaGCAGGCAAAGCCACTTATTCCATTTCCCTGTATT | + |
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Preference number: 6 (lower is better) Translates to: RREEMDISAAAG*QAKPLIPFPCI Trigger: AATACAGGGAAATGGAATAAGTGGCTTTGCCTGCAATCCCGCAGCAGCAGAAATGTCCATTTCCTCTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CAA 90 bp | GGGGAAATGCATTTCTGGGTGACTTCAGGAAGCCTTGGAGGAAGTTaGCGTATTAAAAGGGTGAATATGGTGGAAATAATGGTGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GEMHFWVTSGSLGGS*RIKRVNMVEIMVVV Trigger: CACCACCACCATTATTTCCACCATATTCACCCTTTTAATACGCAAACTTCCTCCAAGGCTTCCTGAAGTCACCCAGAAATGCATTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS GCA 72 bp | TGTAGTATTATTCAGGAGAGAGGAAATGGACATTTCTaGTGCTGCGGGATTGCAGGCAAAGCCACTTATTCC | + |
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Preference number: 6 (lower is better) Translates to: CSIIQERGNGHF*CCGIAGKATYS Trigger: GGAATAAGTGGCTTTGCCTGCAATCCCGCAGCAGCAGAAATGTCCATTTCCTCTCTCCTGAATAATACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CCA 72 bp | AACATGCAGTCAGCAAGACTCCAAGAGTTGAGGATCTaGGTAGCTTCCCAGAGTTCCATAGGATACAATGTT | + |
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Preference number: 6 (lower is better) Translates to: NMQSARLQELRI*VASQSSIGYNV Trigger: AACATTGTATCCTATGGAACTCTGGGAAGCTACCCAGATCCTCAACTCTTGGAGTCTTGCTGACTGCATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CAA 90 bp | GTATTATTCAGGAGAGAGGAAATGGACATTTCTGCTGCTGCGGGATaGCAGGCAAAGCCACTTATTCCATTTCCCTGTATTCTTATCACC | + |
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Preference number: 6 (lower is better) Translates to: VLFRREEMDISAAAG*QAKPLIPFPCILIT Trigger: GGTGATAAGAATACAGGGAAATGGAATAAGTGGCTTTGCCTGCAATCCCGCAGCAGCAGAAATGTCCATTTCCTCTCTCCTGAATAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS GCA 72 bp | AGTATTATTCAGGAGAGAGGAAATGGACATTTCTGCTaGTGCGGGATTGCAGGCAAAGCCACTTATTCCATT | + |
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Preference number: 6 (lower is better) Translates to: SIIQERGNGHFC*CGIAGKATYSI Trigger: AATGGAATAAGTGGCTTTGCCTGCAATCCCGCAGCAGCAGAAATGTCCATTTCCTCTCTCCTGAATAATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CAA 90 bp | GTAGTGATGGTGACTTCGTGTATGTTCATGCTTTTACCTCGAAACTaGTGGAACCCAGTGGAGAATGTAGTATTATTCAGGAGAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VVMVTSCMFMLLPRN*WNPVENVVLFRREE Trigger: TTCCTCTCTCCTGAATAATACTACATTCTCCACTGGGTTCCACAAGTTTCGAGGTAAAAGCATGAACATACACGAAGTCACCATCACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CAA 72 bp | GTGACTTCGTGTATGTTCATGCTTTTACCTCGAAACTaGTGGAACCCAGTGGAGAATGTAGTATTATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VTSCMFMLLPRN*WNPVENVVLFR Trigger: CCTGAATAATACTACATTCTCCACTGGGTTCCACAAGTTTCGAGGTAAAAGCATGAACATACACGAAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CAA 72 bp | CATTTCTGGGTGACTTCAGGAAGCCTTGGAGGAAGTTaGCGTATTAAAAGGGTGAATATGGTGGAAATAATG | + |
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Preference number: 6 (lower is better) Translates to: HFWVTSGSLGGS*RIKRVNMVEIM Trigger: CATTATTTCCACCATATTCACCCTTTTAATACGCAAACTTCCTCCAAGGCTTCCTGAAGTCACCCAGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS TCA 72 bp | TCCCTGTATTCTTATCACCTTCTACAAATGCAGAGTTaGTGTCAGGTGCAGATGAATCAATATCATTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SLYSYHLLQMQS*CQVQMNQYHCK Trigger: CTTGCAATGATATTGATTCATCTGCACCTGACATCAACTCTGCATTTGTAGAAGGTGATAAGAATACAGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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| CDS CAA 72 bp | TTCCCTGTATTCTTATCACCTTCTACAAATGCAGAGTaGATGTCAGGTGCAGATGAATCAATATCATTGCAA | + |
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Preference number: 6 (lower is better) Translates to: FPVFLSPSTNAE*MSGADESISLQ Trigger: TTGCAATGATATTGATTCATCTGCACCTGACATCAACTCTGCATTTGTAGAAGGTGATAAGAATACAGGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536422.1 ENST00000619954.1 |
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