Pregenerated sensors for LINC02824 (Homo sapiens)
Ensembl gene IDs: ENSG00000255998Ensembl transcript IDs: ENST00000544711.1, ENST00000545535.2, ENST00000653842.1, ENST00000653913.1, ENST00000656606.1, ENST00000667303.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGTGCAGGGAAGGTCTGTGGAATGCTGTCCTTTTGAGTTGCTGCTaGTTCTGCAGGTCTGCATTCAGACTTGTGGCAGTCGGCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: QCREGLWNAVLLSCC*FCRSAFRLVAVGLG Trigger: GCCCAGGCCGACTGCCACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCATTCCACAGACCTTCCCTGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 90 bp | GGGCAGTGCAGGGAAGGTCTGTGGAATGCTGTCCTTTTGAGTTGCTaGTGCTTCTGCAGGTCTGCATTCAGACTTGTGGCAGTCGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GQCREGLWNAVLLSC*CFCRSAFRLVAVGL Trigger: CAGGCCGACTGCCACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCATTCCACAGACCTTCCCTGCACTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 90 bp | AGGGAAGGTCTGTGGAATGCTGTCCTTTTGAGTTGCTGCTGCTTCTaGAGGTCTGCATTCAGACTTGTGGCAGTCGGCCTGGGCCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: REGLWNAVLLSCCCF*RSAFRLVAVGLGPL Trigger: CAAAGGGCCCAGGCCGACTGCCACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCATTCCACAGACCTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS CCA 90 bp | CCACCACTCAGCCCTCCTCGAACACTAGAGCAAGTTGAGGTTAGGTaGATAAGTGGGAGCTTTCAGGGTGTATGGCGAGTAGGCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: PPLSPPRTLEQVEVR*ISGSFQGVWRVGRS Trigger: GGACCTGCCTACTCGCCATACACCCTGAAAGCTCCCACTTATCCACCTAACCTCAACTTGCTCTAGTGTTCGAGGAGGGCTGAGTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 90 bp | GTGGAAGAACTTTCTGGGGGAAACAGCCATCACTGCAGGCCAAGATaGACTTCGCTAGACTTGACTGGGGCTGCTAGCTCCTCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VEELSGGNSHHCRPR*TSLDLTGAASSSLL Trigger: GAGAAGAGAGGAGCTAGCAGCCCCAGTCAAGTCTAGCGAAGTGCATCTTGGCCTGCAGTGATGGCTGTTTCCCCCAGAAAGTTCTTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000545535.2 ENST00000653842.1 ENST00000653913.1 ENST00000656606.1 |
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| CDS GCA 90 bp | TGGGATCCAGAAGTGGAAGAACTTTCTGGGGGAAACAGCCATCACTaGAGGCCAAGATGCACTTCGCTAGACTTGACTGGGGCTGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: WDPEVEELSGGNSHH*RPRCTSLDLTGAAS Trigger: GCTAGCAGCCCCAGTCAAGTCTAGCGAAGTGCATCTTGGCCTGCAGTGATGGCTGTTTCCCCCAGAAAGTTCTTCCACTTCTGGATCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000545535.2 ENST00000653842.1 ENST00000653913.1 ENST00000656606.1 |
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| CDS GCA 90 bp | TCTGTGGAATGCTGTCCTTTTGAGTTGCTGCTGCTTCTGCAGGTCTaGATTCAGACTTGTGGCAGTCGGCCTGGGCCCTTTGTTGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: SVECCPFELLLLLQV*IQTCGSRPGPFVGQ Trigger: CTGACCAACAAAGGGCCCAGGCCGACTGCCACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCATTCCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS TCA 90 bp | GCTATGAAGGGCAGTGCAGGGAAGGTCTGTGGAATGCTGTCCTTTTaGGTTGCTGCTGCTTCTGCAGGTCTGCATTCAGACTTGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: AMKGSAGKVCGMLSF*VAAASAGLHSDLWQ Trigger: CTGCCACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCATTCCACAGACCTTCCCTGCACTGCCCTTCATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS CCA 90 bp | CCAGCAGTAGATTGTGTAAGGTTCAGTCGAGGTGGGATCCAGAAGTaGAAGAACTTTCTGGGGGAAACAGCCATCACTGCAGGCCAAGAT | + |
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Preference number: 5 (lower is better) Translates to: PAVDCVRFSRGGIQK*KNFLGETAITAGQD Trigger: ATCTTGGCCTGCAGTGATGGCTGTTTCCCCCAGAAAGTTCTTCCACTTCTGGATCCCACCTCGACTGAACCTTACACAATCTACTGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000545535.2 ENST00000653842.1 ENST00000653913.1 ENST00000656606.1 |
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| CDS CCA 90 bp | GCCATTGGAAAGTCCAGCAGTAGATTGTGTAAGGTTCAGTCGAGGTaGGATCCAGAAGTGGAAGAACTTTCTGGGGGAAACAGCCATCAC | + |
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Preference number: 5 (lower is better) Translates to: AIGKSSSRLCKVQSR*DPEVEELSGGNSHH Trigger: GTGATGGCTGTTTCCCCCAGAAAGTTCTTCCACTTCTGGATCCCACCTCGACTGAACCTTACACAATCTACTGCTGGACTTTCCAATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000545535.2 ENST00000653842.1 ENST00000653913.1 ENST00000656606.1 |
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| CDS CCA 90 bp | GCAGGTCTGCATTCAGACTTGTGGCAGTCGGCCTGGGCCCTTTGTTaGTCAGGAAATCTGGCAATTGACAAGAAGAGCAGGATAAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: AGLHSDLWQSAWALC*SGNLAIDKKSRIKN Trigger: ATTCTTTATCCTGCTCTTCTTGTCAATTGCCAGATTTCCTGACCAACAAAGGGCCCAGGCCGACTGCCACAAGTCTGAATGCAGACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS TCA 90 bp | CAAGATCTGGGCGGAGGAGAAGAGTCTTTGGGAATCATCTGCCTGTaGTTTGCATCCTGTACAACTCATGCCATTGGAAAGTCCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: QDLGGGEESLGIICL*FASCTTHAIGKSSS Trigger: ACTGCTGGACTTTCCAATGGCATGAGTTGTACAGGATGCAAATCACAGGCAGATGATTCCCAAAGACTCTTCTCCTCCGCCCAGATCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653842.1 ENST00000653913.1 |
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| CDS TCA 90 bp | GCATCCACATTGTCCATAGTAGAAAATGATGGTCTTCTTTGGAGATaGTCTCCGTTTCCAGAAGGAGAAGCCGTGGCTTGCCCATCCTCT | + |
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Preference number: 5 (lower is better) Translates to: ASTLSIVENDGLLWR*SPFPEGEAVACPSS Trigger: AGAGGATGGGCAAGCCACGGCTTCTCCTTCTGGAAACGGAGATCATCTCCAAAGAAGACCATCATTTTCTACTATGGACAATGTGGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000544711.1 ENST00000545535.2 ENST00000667303.1 |
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| CDS TCA 90 bp | CCCACTGATACCTTGCTAGCTCTTAGCTCCCACCTGTACCCACAATaGTCTTCAGTGATCAGTGACTGTGGCTTCATTTTTACTATCCAA | + |
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Preference number: 5 (lower is better) Translates to: PTDTLLALSSHLYPQ*SSVISDCGFIFTIQ Trigger: TTGGATAGTAAAAATGAAGCCACAGTCACTGATCACTGAAGATCATTGTGGGTACAGGTGGGAGCTAAGAGCTAGCAAGGTATCAGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS TCA 90 bp | TGTGAATGGGAGAGAACTAGCATCCACATTGTCCATAGTAGAAAATaGTGGTCTTCTTTGGAGATGATCTCCGTTTCCAGAAGGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: CEWERTSIHIVHSRK*WSSLEMISVSRRRS Trigger: GCTTCTCCTTCTGGAAACGGAGATCATCTCCAAAGAAGACCATCATTTTCTACTATGGACAATGTGGATGCTAGTTCTCTCCCATTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000544711.1 ENST00000545535.2 ENST00000653913.1 ENST00000667303.1 |
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| CDS TCA 90 bp | AGCAGCACTTCTATTAGTATTATGAAATCAGGGATATATTTAGAATaGGGGCTTGTAATACTTGGGGGAGAAGGGCAAGTGTTGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: SSTSISIMKSGIYLE*GLVILGGEGQVLEG Trigger: GCCTTCCAACACTTGCCCTTCTCCCCCAAGTATTACAAGCCCTCATTCTAAATATATCCCTGATTTCATAATACTAATAGAAGTGCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 90 bp | AGAGATTTAGGGAAATATGATTCTAGCTTAACCAGTTTGACTGAGTaGAAACCTCCTCATCCATTGACAAGGCAATGTTCAGAAATGGGA | + |
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Preference number: 5 (lower is better) Translates to: RDLGKYDSSLTSLTE*KPPHPLTRQCSEMG Trigger: TCCCATTTCTGAACATTGCCTTGTCAATGGATGAGGAGGTTTGCACTCAGTCAAACTGGTTAAGCTAGAATCATATTTCCCTAAATCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS TCA 72 bp | ATGGCGAGTAGGCAGGTCCAGCTGCAGAGTGGGCTATaGAGGGCAGTGCAGGGAAGGTCTGTGGAATGCTGT | + |
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Preference number: 6 (lower is better) Translates to: MASRQVQLQSGL*RAVQGRSVECC Trigger: ACAGCATTCCACAGACCTTCCCTGCACTGCCCTTCATAGCCCACTCTGCAGCTGGACCTGCCTACTCGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 72 bp | CTTTCTGGGGGAAACAGCCATCACTGCAGGCCAAGATaGACTTCGCTAGACTTGACTGGGGCTGCTAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSGGNSHHCRPR*TSLDLTGAASS Trigger: GGAGCTAGCAGCCCCAGTCAAGTCTAGCGAAGTGCATCTTGGCCTGCAGTGATGGCTGTTTCCCCCAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000544711.1 ENST00000545535.2 ENST00000653842.1 ENST00000653913.1 ENST00000656606.1 ENST00000667303.1 |
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| CDS GCA 72 bp | GGCAGGTCCAGCTGCAGAGTGGGCTATGAAGGGCAGTaGAGGGAAGGTCTGTGGAATGCTGTCCTTTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: GRSSCRVGYEGQ*REGLWNAVLLS Trigger: ACTCAAAAGGACAGCATTCCACAGACCTTCCCTGCACTGCCCTTCATAGCCCACTCTGCAGCTGGACCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS CCA 72 bp | TCTGCAGGTCTGCATTCAGACTTGTGGCAGTCGGCCTaGGCCCTTTGTTGGTCAGGAAATCTTCCTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SAGLHSDLWQSA*ALCWSGNLPLP Trigger: GGGGAGAGGAAGATTTCCTGACCAACAAAGGGCCCAGGCCGACTGCCACAAGTCTGAATGCAGACCTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653842.1 |
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| CDS CAA 72 bp | GCATTCAGACTTGTGGCAGTCGGCCTGGGCCCTTTGTaGGTCAGGAAATCTTCCTCTCCCCCGACACACACA | + |
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Preference number: 6 (lower is better) Translates to: AFRLVAVGLGPL*VRKSSSPPTHT Trigger: TGTGTGTGTCGGGGGAGAGGAAGATTTCCTGACCAACAAAGGGCCCAGGCCGACTGCCACAAGTCTGAATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653842.1 |
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| CDS CAA 72 bp | TCTGCATTCAGACTTGTGGCAGTCGGCCTGGGCCCTTaGTTGGTCAGGAAATCTTCCTCTCCCCCGACACAC | + |
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Preference number: 6 (lower is better) Translates to: SAFRLVAVGLGP*LVRKSSSPPTH Trigger: GTGTGTCGGGGGAGAGGAAGATTTCCTGACCAACAAAGGGCCCAGGCCGACTGCCACAAGTCTGAATGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653842.1 |
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| CDS GCA 72 bp | TGCTGTCCTTTTGAGTTGCTGCTGCTTCTGCAGGTCTaGATTCAGACTTGTGGCAGTCGGCCTGGGCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: CCPFELLLLLQV*IQTCGSRPGPF Trigger: AAAGGGCCCAGGCCGACTGCCACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS CCA 72 bp | CATTCAGACTTGTGGCAGTCGGCCTGGGCCCTTTGTTaGTCAGGAAATCTTCCTCTCCCCCGACACACACAT | + |
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Preference number: 6 (lower is better) Translates to: HSDLWQSAWALC*SGNLPLPRHTH Trigger: ATGTGTGTGTCGGGGGAGAGGAAGATTTCCTGACCAACAAAGGGCCCAGGCCGACTGCCACAAGTCTGAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653842.1 |
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| CDS CCA 72 bp | TCTGCAGGTCTGCATTCAGACTTGTGGCAGTCGGCCTaGGCCCTTTGTTGGTCAGGAAATCTGGCAATTGAC | + |
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Preference number: 6 (lower is better) Translates to: SAGLHSDLWQSA*ALCWSGNLAID Trigger: GTCAATTGCCAGATTTCCTGACCAACAAAGGGCCCAGGCCGACTGCCACAAGTCTGAATGCAGACCTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 72 bp | TTGCAGGAGGCACAGGGAATTAATTCTGCTGCCTACTaGCACGTGTTGAGACCTTTCTGGGGGAAACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LQEAQGINSAAY*HVLRPFWGKQP Trigger: TGGCTGTTTCCCCCAGAAAGGTCTCAACACGTGGCAGTAGGCAGCAGAATTAATTCCCTGTGCCTCCTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667303.1 |
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| CDS CCA 72 bp | CATTCAGACTTGTGGCAGTCGGCCTGGGCCCTTTGTTaGTCAGGAAATCTGGCAATTGACAAGAAGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HSDLWQSAWALC*SGNLAIDKKSR Trigger: CCTGCTCTTCTTGTCAATTGCCAGATTTCCTGACCAACAAAGGGCCCAGGCCGACTGCCACAAGTCTGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 72 bp | GAAGGTCTGTGGAATGCTGTCCTTTTGAGTTGCTGCTaGTTCTGCAGGTCTGCATTCAGACTTGTGGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: EGLWNAVLLSCC*FCRSAFRLVAV Trigger: GACTGCCACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCATTCCACAGACCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 72 bp | AGGGAAGGTCTGTGGAATGCTGTCCTTTTGAGTTGCTaGTGCTTCTGCAGGTCTGCATTCAGACTTGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: REGLWNAVLLSC*CFCRSAFRLVA Trigger: TGCCACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCATTCCACAGACCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 72 bp | TGCAGGGAAGGTCTGTGGAATGCTGTCCTTTTGAGTTaGTGCTGCTTCTGCAGGTCTGCATTCAGACTTGTG | + |
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Preference number: 6 (lower is better) Translates to: CREGLWNAVLLS*CCFCRSAFRLV Trigger: CACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCATTCCACAGACCTTCCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS CAA 72 bp | GTGCAGGGAAGGTCTGTGGAATGCTGTCCTTTTGAGTaGCTGCTGCTTCTGCAGGTCTGCATTCAGACTTGT | + |
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Preference number: 6 (lower is better) Translates to: VQGRSVECCPFE*LLLLQVCIQTC Trigger: ACAAGTCTGAATGCAGACCTGCAGAAGCAGCAGCAACTCAAAAGGACAGCATTCCACAGACCTTCCCTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 72 bp | TTGCAGGAGGCACAGGGAATTAATTCTGCTGCCTACTaGCACGTGTTGAGACCTTTCAGAACCCCACATACA | + |
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Preference number: 6 (lower is better) Translates to: LQEAQGINSAAY*HVLRPFRTPHT Trigger: TGTATGTGGGGTTCTGAAAGGTCTCAACACGTGGCAGTAGGCAGCAGAATTAATTCCCTGTGCCTCCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653842.1 ENST00000653913.1 |
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| CDS CCA 72 bp | GATTGTGTAAGGTTCAGTCGAGGTGGGATCCAGAAGTaGAAGAACTTTCTGGGGGAAACAGCCATCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: DCVRFSRGGIQK*KNFLGETAITA Trigger: TGCAGTGATGGCTGTTTCCCCCAGAAAGTTCTTCCACTTCTGGATCCCACCTCGACTGAACCTTACACAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000545535.2 ENST00000653842.1 ENST00000653913.1 ENST00000656606.1 |
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| CDS CCA 72 bp | AAGTCCAGCAGTAGATTGTGTAAGGTTCAGTCGAGGTaGGATCCAGAAGTGGAAGAACTTTCTGGGGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: KSSSRLCKVQSR*DPEVEELSGGN Trigger: GTTTCCCCCAGAAAGTTCTTCCACTTCTGGATCCCACCTCGACTGAACCTTACACAATCTACTGCTGGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000545535.2 ENST00000653842.1 ENST00000653913.1 ENST00000656606.1 |
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| CDS CAA 90 bp | TGGGAATCATCTGCCTGTGATTTGCATCCTGTACAACTCATGCCATaGGAAAGTCCAGCAGTAGATTGTGTAAGGTTCAGTCGAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: WESSACDLHPVQLMP*ESPAVDCVRFSRGG Trigger: CCCACCTCGACTGAACCTTACACAATCTACTGCTGGACTTTCCAATGGCATGAGTTGTACAGGATGCAAATCACAGGCAGATGATTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653842.1 ENST00000653913.1 |
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| CDS CAA 90 bp | ATCTGGGCGGAGGAGAAGAGTCTTTGGGAATCATCTGCCTGTGATTaGCATCCTGTACAACTCATGCCATTGGAAAGTCCAGCAGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: IWAEEKSLWESSACD*HPVQLMPLESPAVD Trigger: ATCTACTGCTGGACTTTCCAATGGCATGAGTTGTACAGGATGCAAATCACAGGCAGATGATTCCCAAAGACTCTTCTCCTCCGCCCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653842.1 ENST00000653913.1 |
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| CDS CCA 72 bp | ATCAGGGATATATTTAGAATGAGGGCTTGTAATACTTaGGGGAGAAGGGCAAGTGTTGGAAGGCCCGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: IRDIFRMRACNT*GRRASVGRPEE Trigger: TTCCTCGGGCCTTCCAACACTTGCCCTTCTCCCCCAAGTATTACAAGCCCTCATTCTAAATATATCCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653842.1 ENST00000653913.1 ENST00000667303.1 |
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| CDS CAA 72 bp | TTACCAACTCATGCCATTGGAAAGTCCAGCAGTAGATaGTGTAAGGTTCAGTCGAGGTGGGATCCAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LPTHAIGKSSSR*CKVQSRWDPEV Trigger: CACTTCTGGATCCCACCTCGACTGAACCTTACACAATCTACTGCTGGACTTTCCAATGGCATGAGTTGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000545535.2 ENST00000656606.1 |
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| CDS TCA 72 bp | TTGTCCATAGTAGAAAATGATGGTCTTCTTTGGAGATaGTCTCCGTTTCCAGAAGGAGAAGCCGTGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LSIVENDGLLWR*SPFPEGEAVAC Trigger: GCAAGCCACGGCTTCTCCTTCTGGAAACGGAGATCATCTCCAAAGAAGACCATCATTTTCTACTATGGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000544711.1 ENST00000545535.2 ENST00000653913.1 ENST00000667303.1 |
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| CDS TCA 72 bp | ACCTTGCTAGCTCTTAGCTCCCACCTGTACCCACAATaGTCTTCAGTGATCAGTGACTGTGGCTTCATTTTT | + |
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Preference number: 6 (lower is better) Translates to: TLLALSSHLYPQ*SSVISDCGFIF Trigger: AAAAATGAAGCCACAGTCACTGATCACTGAAGATCATTGTGGGTACAGGTGGGAGCTAAGAGCTAGCAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS TCA 72 bp | CTCCCACCTGTACCCACAATGATCTTCAGTGATCAGTaGCTGTGGCTTCATTTTTACTATCCAAATCACGTC | + |
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Preference number: 6 (lower is better) Translates to: LPPVPTMIFSDQ*LWLHFYYPNHV Trigger: GACGTGATTTGGATAGTAAAAATGAAGCCACAGTCACTGATCACTGAAGATCATTGTGGGTACAGGTGGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS CAA 72 bp | CTTTATTCTCCCTCGCTCTTTTATCGTCTTCTATCATaGGCCAGAGCCAACTGGAAACCAAAGCAGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LYSPSLFYRLLS*ARANWKPKQKG Trigger: TCCTTTCTGCTTTGGTTTCCAGTTGGCTCTGGCCAATGATAGAAGACGATAAAAGAGCGAGGGAGAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000545535.2 |
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| CDS CAA 72 bp | TCTGCCTGTGATTTGCATCCTGTACAACTCATGCCATaGGAAAGTCCAGCAGTAGATTGTGTAAGGTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SACDLHPVQLMP*ESPAVDCVRFS Trigger: ACTGAACCTTACACAATCTACTGCTGGACTTTCCAATGGCATGAGTTGTACAGGATGCAAATCACAGGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653842.1 ENST00000653913.1 |
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| CDS CAA 72 bp | TTAACCAGTTTGACTGAGTGCAAACCTCCTCATCCATaGACAAGGCAATGTTCAGAAATGGGACCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LTSLTECKPPHP*TRQCSEMGPSS Trigger: AGAGGATGGTCCCATTTCTGAACATTGCCTTGTCAATGGATGAGGAGGTTTGCACTCAGTCAAACTGGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS CAA 90 bp | GATTCTAGCTTAACCAGTTTGACTGAGTGCAAACCTCCTCATCCATaGACAAGGCAATGTTCAGAAATGGGACCATCCTCTTCTTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: DSSLTSLTECKPPHP*TRQCSEMGPSSSCE Trigger: TTCACAAGAAGAGGATGGTCCCATTTCTGAACATTGCCTTGTCAATGGATGAGGAGGTTTGCACTCAGTCAAACTGGTTAAGCTAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS TCA 72 bp | CTCTTAGCTCCCACCTGTACCCACAATGATCTTCAGTaGTCAGTGACTGTGGCTTCATTTTTACTATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLAPTCTHNDLQ*SVTVASFLLSK Trigger: TTTGGATAGTAAAAATGAAGCCACAGTCACTGATCACTGAAGATCATTGTGGGTACAGGTGGGAGCTAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS CCA 72 bp | TTTATTCTCCCTCGCTCTTTTATCGTCTTCTATCATTaGCCAGAGCCAACTGGAAACCAAAGCAGAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: FILPRSFIVFYH*PEPTGNQSRKE Trigger: TTCCTTTCTGCTTTGGTTTCCAGTTGGCTCTGGCCAATGATAGAAGACGATAAAAGAGCGAGGGAGAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000545535.2 ENST00000656606.1 |
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| CDS CAA 72 bp | TCCACACCTGTGAATGGGAGAGAACTAGCATCCACATaGTCCATAGTAGAAAATGATGGTCTTCTTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: STPVNGRELAST*SIVENDGLLWR Trigger: TCTCCAAAGAAGACCATCATTTTCTACTATGGACAATGTGGATGCTAGTTCTCTCCCATTCACAGGTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000545535.2 ENST00000653913.1 ENST00000667303.1 |
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| CDS CAA 72 bp | GCTGAACCTGTGAATGGGAGAGAACTAGCATCCACATaGTCCATAGTAGAAAATGATGGTCTTCTTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: AEPVNGRELAST*SIVENDGLLWR Trigger: TCTCCAAAGAAGACCATCATTTTCTACTATGGACAATGTGGATGCTAGTTCTCTCCCATTCACAGGTTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000544711.1 ENST00000653842.1 |
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| CDS GCA 72 bp | GGGAAATATGATTCTAGCTTAACCAGTTTGACTGAGTaGAAACCTCCTCATCCATTGACAAGGCAATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GKYDSSLTSLTE*KPPHPLTRQCS Trigger: TGAACATTGCCTTGTCAATGGATGAGGAGGTTTGCACTCAGTCAAACTGGTTAAGCTAGAATCATATTTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS CAA 90 bp | AACAGGACAAGAGATTTAGGGAAATATGATTCTAGCTTAACCAGTTaGACTGAGTGCAAACCTCCTCATCCATTGACAAGGCAATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: NRTRDLGKYDSSLTS*TECKPPHPLTRQCS Trigger: TGAACATTGCCTTGTCAATGGATGAGGAGGTTTGCACTCAGTCAAACTGGTTAAGCTAGAATCATATTTCCCTAAATCTCTTGTCCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS CAA 72 bp | AGAGATTTAGGGAAATATGATTCTAGCTTAACCAGTTaGACTGAGTGCAAACCTCCTCATCCATTGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: RDLGKYDSSLTS*TECKPPHPLTR Trigger: CCTTGTCAATGGATGAGGAGGTTTGCACTCAGTCAAACTGGTTAAGCTAGAATCATATTTCCCTAAATCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653913.1 ENST00000667303.1 |
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| CDS GCA 72 bp | CTCTCAGCTGCAAGTGATGGAAACTCAAGTTACACTTaGTTTTGCAAAAATGAGATGATTTACCAACTCATG | + |
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Preference number: 6 (lower is better) Translates to: LSAASDGNSSYT*FCKNEMIYQLM Trigger: CATGAGTTGGTAAATCATCTCATTTTTGCAAAAGCAAGTGTAACTTGAGTTTCCATCACTTGCAGCTGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000545535.2 ENST00000656606.1 |
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