Pregenerated sensors for LINC02823 (Homo sapiens)
Ensembl gene IDs: ENSG00000258100Ensembl transcript IDs: ENST00000551571.1, ENST00000651000.1, ENST00000657916.1, ENST00000660548.1, ENST00000661839.1, ENST00000667542.1, ENST00000669621.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGAGTTCAAGACCGTTCTGGACAACACGGGGAGACCCCTGTCTCTaGACATTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RSSRPFWTTRGDPCL*TFRRRRDGTGVIPG Trigger: GCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAATGTCCAGAGACAGGGGTCTCCCCGTGTTGTCCAGAACGGTCTTGAACTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000551571.1 ENST00000657916.1 ENST00000661839.1 ENST00000669621.1 |
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| CDS CCA 90 bp | AGCCTGGACATTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTaGCAGAAGGTGGCAGAACGCATGGGCAAAGCTCCCATCCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: SLDIQETTGWDRCNS*QKVAERMGKAPILL Trigger: TAGGAGGATGGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAATGTCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667542.1 |
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| CDS CCA 90 bp | TTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTGGCAGAAGGTaGCAGAACGCATGGGCAAAGCTCCTCTTTTGCAACCAGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: FRRRRDGTGVIPGRR*QNAWAKLLFCNQCC Trigger: GCAGCACTGGTTGCAAAAGAGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669621.1 |
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| CDS CCA 90 bp | AGCCTGGACATTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTaGCAGAAGGTGGCAGAACGCATGGGCAAAGCTCCTGAAACAGAA | + |
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Preference number: 5 (lower is better) Translates to: SLDIQETTGWDRCNS*QKVAERMGKAPETE Trigger: TTCTGTTTCAGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAATGTCCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651000.1 ENST00000660548.1 |
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| CDS CCA 90 bp | TTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTGGCAGAAGGTaGCAGAACGCATGGGCAAAGCTCCCATCCTCCTATTTCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: FRRRRDGTGVIPGRR*QNAWAKLPSSYFSM Trigger: CATGGAGAAATAGGAGGATGGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667542.1 |
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| CDS CCA 90 bp | TCTCTGGACATTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTaGCAGAAGGTGGCAGAACGCATGGGCAAAGCTCCTGAAACAGAA | + |
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Preference number: 5 (lower is better) Translates to: SLDIQETTGWDRCNS*QKVAERMGKAPETE Trigger: TTCTGTTTCAGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAATGTCCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000551571.1 ENST00000657916.1 ENST00000661839.1 |
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| CDS CCA 90 bp | TTACTTCATAGATGCAAGAGCCTGGACATTCAGGAGACGACGGGATaGGACAGGTGTAATTCCTGGCAGAAGGTGGCAGAACGCATGGGC | + |
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Preference number: 5 (lower is better) Translates to: LLHRCKSLDIQETTG*DRCNSWQKVAERMG Trigger: GCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAATGTCCAGGCTCTTGCATCTATGAAGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000651000.1 ENST00000660548.1 ENST00000667542.1 |
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| CDS CCA 90 bp | TCTCTGGACATTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTaGCAGAAGGTGGCAGAACGCATGGGCAAAGCTCCTCTTTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: SLDIQETTGWDRCNS*QKVAERMGKAPLLQ Trigger: TTGCAAAAGAGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAATGTCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669621.1 |
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| CDS CCA 90 bp | TTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTGGCAGAAGGTaGCAGAACGCATGGGCAAAGCTCCTGAAACAGAAGAAGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: FRRRRDGTGVIPGRR*QNAWAKLLKQKKSE Trigger: TTCAGACTTCTTCTGTTTCAGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000551571.1 ENST00000651000.1 ENST00000657916.1 ENST00000660548.1 ENST00000661839.1 |
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| CDS CCA 90 bp | CGGGATGGGACAGGTGTAATTCCTGGCAGAAGGTGGCAGAACGCATaGGCAAAGCTCCTGAAACAGAAGAAGTCTGAATCATGGATGAAC | + |
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Preference number: 5 (lower is better) Translates to: RDGTGVIPGRRWQNA*AKLLKQKKSESWMN Trigger: GTTCATCCATGATTCAGACTTCTTCTGTTTCAGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000551571.1 ENST00000651000.1 ENST00000657916.1 ENST00000660548.1 ENST00000661839.1 |
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| CDS CCA 90 bp | CACAGTGATAAAGGGGCTGAATGGCCTTTGAGCAGTCATTTTGGTTaGTGCAGGCTGAAGCGAGTGTGTTTCCCATCCTCCTATTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: HSDKGAEWPLSSHFG*CRLKRVCFPSSYFS Trigger: GGAGAAATAGGAGGATGGGAAACACACTCGCTTCAGCCTGCACCAACCAAAATGACTGCTCAAAGGCCATTCAGCCCCTTTATCACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660548.1 |
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| CDS GCA 90 bp | AGTGATAAAGGGGCTGAATGGCCTTTGAGCAGTCATTTTGGTTGGTaGAGGCTGAAGCGAGTGTGTTTCCCATCCTCCTATTTCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: SDKGAEWPLSSHFGW*RLKRVCFPSSYFSM Trigger: CATGGAGAAATAGGAGGATGGGAAACACACTCGCTTCAGCCTGCACCAACCAAAATGACTGCTCAAAGGCCATTCAGCCCCTTTATCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660548.1 |
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| CDS CCA 90 bp | CACAGTGATAAAGGGGCTGAATGGCCTTTGAGCAGTCATTTTGGTTaGTGCAGGCTGAAGCGAGTGTGTTTCCTTCTTGACGTATTCGGT | + |
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Preference number: 5 (lower is better) Translates to: HSDKGAEWPLSSHFG*CRLKRVCFLLDVFG Trigger: ACCGAATACGTCAAGAAGGAAACACACTCGCTTCAGCCTGCACCAACCAAAATGACTGCTCAAAGGCCATTCAGCCCCTTTATCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661839.1 |
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| CDS CCA 90 bp | AAAGCTCCTCTTTTGCAACCAGTGCTGCTACTGGGCTTGTACTCTTaGAAACATTTCACAGGCAAGACTCCTCCAACCCATACAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: KAPLLQPVLLLGLYS*KHFTGKTPPTHTEA Trigger: AGCCTCTGTATGGGTTGGAGGAGTCTTGCCTGTGAAATGTTTCCAAGAGTACAAGCCCAGTAGCAGCACTGGTTGCAAAAGAGGAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669621.1 |
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| CDS GCA 90 bp | AGTGATAAAGGGGCTGAATGGCCTTTGAGCAGTCATTTTGGTTGGTaGAGGCTGAAGCGAGTGTGTTTCCTTCTTGACGTATTCGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: SDKGAEWPLSSHFGW*RLKRVCFLLDVFGC Trigger: ACAACCGAATACGTCAAGAAGGAAACACACTCGCTTCAGCCTGCACCAACCAAAATGACTGCTCAAAGGCCATTCAGCCCCTTTATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661839.1 |
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| CDS TCA 90 bp | AAGGTGGCAGAACGCATGGGCAAAGCTCCTGAAACAGAAGAAGTCTaGATCATGGATGAACTGGGAAGAAAATCAAAGTTGAGCCACAGT | + |
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Preference number: 5 (lower is better) Translates to: KVAERMGKAPETEEV*IMDELGRKSKLSHS Trigger: ACTGTGGCTCAACTTTGATTTTCTTCCCAGTTCATCCATGATTCAGACTTCTTCTGTTTCAGGAGCTTTGCCCATGCGTTCTGCCACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000551571.1 ENST00000651000.1 ENST00000657916.1 ENST00000660548.1 ENST00000661839.1 |
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| CDS CCA 72 bp | AGACCGTTCTGGACAACACGGGGAGACCCCTGTCTCTaGACATTCAGGAGACGACGGGATGGGACAGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: RPFWTTRGDPCL*TFRRRRDGTGV Trigger: TACACCTGTCCCATCCCGTCGTCTCCTGAATGTCCAGAGACAGGGGTCTCCCCGTGTTGTCCAGAACGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000551571.1 ENST00000657916.1 ENST00000661839.1 ENST00000669621.1 |
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| CDS CCA 72 bp | CGACGGGATGGGACAGGTGTAATTCCTGGCAGAAGGTaGCAGAACGCATGGGCAAAGCTCCCATCCTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: RRDGTGVIPGRR*QNAWAKLPSSY Trigger: ATAGGAGGATGGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667542.1 |
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| CDS CCA 72 bp | ATTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTaGCAGAAGGTGGCAGAACGCATGGGCAAAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: IQETTGWDRCNS*QKVAERMGKAP Trigger: GGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667542.1 |
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| CDS CCA 72 bp | ATTCAGGAGACGACGGGATGGGACAGGTGTAATTCCTaGCAGAAGGTGGCAGAACGCATGGGCAAAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: IQETTGWDRCNS*QKVAERMGKAP Trigger: AGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000551571.1 ENST00000651000.1 ENST00000657916.1 ENST00000660548.1 ENST00000661839.1 ENST00000669621.1 |
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| CDS CCA 72 bp | AGACCCCTGTCTCTGGACATTCAGGAGACGACGGGATaGGACAGGTGTAATTCCTGGCAGAAGGTGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RPLSLDIQETTG*DRCNSWQKVAE Trigger: TTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAATGTCCAGAGACAGGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000551571.1 ENST00000657916.1 ENST00000661839.1 ENST00000669621.1 |
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| CDS CCA 72 bp | CGACGGGATGGGACAGGTGTAATTCCTGGCAGAAGGTaGCAGAACGCATGGGCAAAGCTCCTCTTTTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: RRDGTGVIPGRR*QNAWAKLLFCN Trigger: GTTGCAAAAGAGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669621.1 |
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| CDS CCA 72 bp | AGATGCAAGAGCCTGGACATTCAGGAGACGACGGGATaGGACAGGTGTAATTCCTGGCAGAAGGTGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RCKSLDIQETTG*DRCNSWQKVAE Trigger: TTCTGCCACCTTCTGCCAGGAATTACACCTGTCCCATCCCGTCGTCTCCTGAATGTCCAGGCTCTTGCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000651000.1 ENST00000660548.1 ENST00000667542.1 |
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| CDS GCA 72 bp | GGGGCTGAATGGCCTTTGAGCAGTCATTTTGGTTGGTaGAGGCTGAAGCGAGTGTGTTTCCCATCCTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: GAEWPLSSHFGW*RLKRVCFPSSY Trigger: ATAGGAGGATGGGAAACACACTCGCTTCAGCCTGCACCAACCAAAATGACTGCTCAAAGGCCATTCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660548.1 |
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| CDS GCA 72 bp | GGGGCTGAATGGCCTTTGAGCAGTCATTTTGGTTGGTaGAGGCTGAAGCGAGTGTGTTTCCCAGGAATAATG | + |
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Preference number: 6 (lower is better) Translates to: GAEWPLSSHFGW*RLKRVCFPGIM Trigger: CATTATTCCTGGGAAACACACTCGCTTCAGCCTGCACCAACCAAAATGACTGCTCAAAGGCCATTCAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651000.1 |
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| CDS GCA 72 bp | GGGGCTGAATGGCCTTTGAGCAGTCATTTTGGTTGGTaGAGGCTGAAGCGAGTGTGTTTCCTTCTTGACGTA | + |
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Preference number: 6 (lower is better) Translates to: GAEWPLSSHFGW*RLKRVCFLLDV Trigger: TACGTCAAGAAGGAAACACACTCGCTTCAGCCTGCACCAACCAAAATGACTGCTCAAAGGCCATTCAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661839.1 |
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| CDS CAA 72 bp | AAGTTGAGCCACAGTGATAAAGGGGCTGAATGGCCTTaGAGCAGTCATTTTGGTTGGTGCAGGCTGAAGCGA | + |
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Preference number: 6 (lower is better) Translates to: KLSHSDKGAEWP*SSHFGWCRLKR Trigger: TCGCTTCAGCCTGCACCAACCAAAATGACTGCTCAAAGGCCATTCAGCCCCTTTATCACTGTGGCTCAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000551571.1 ENST00000651000.1 ENST00000657916.1 ENST00000660548.1 ENST00000661839.1 |
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| CDS CAA 72 bp | GGCCTCCCTGGAGACATCCACATTTTCTCCCAAGCATaGTGGAATCTCAAAAGCCTTCGACTCTACGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GLPGDIHIFSQA*WNLKSLRLYAS Trigger: TGAAGCGTAGAGTCGAAGGCTTTTGAGATTCCACAATGCTTGGGAGAAAATGTGGATGTCTCCAGGGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661839.1 ENST00000669621.1 |
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| CDS GCA 72 bp | AACGCATGGGCAAAGCTCCTCTTTTGCAACCAGTGCTaGTACTGGGCTTGTACTCTTGGAAACATTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: NAWAKLLFCNQC*YWACTLGNISQ Trigger: CTGTGAAATGTTTCCAAGAGTACAAGCCCAGTAGCAGCACTGGTTGCAAAAGAGGAGCTTTGCCCATGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669621.1 |
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| CDS GCA 72 bp | CAGAACGCATGGGCAAAGCTCCTCTTTTGCAACCAGTaGTGCTACTGGGCTTGTACTCTTGGAAACATTTCA | + |
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Preference number: 6 (lower is better) Translates to: QNAWAKLLFCNQ*CYWACTLGNIS Trigger: TGAAATGTTTCCAAGAGTACAAGCCCAGTAGCAGCACTGGTTGCAAAAGAGGAGCTTTGCCCATGCGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669621.1 |
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| CDS CCA 72 bp | ACAGGTGTAATTCCTGGCAGAAGGTGGCAGAACGCATaGGCAAAGCTCCTGAAACAGAAGAAGTCTGAATCA | + |
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Preference number: 6 (lower is better) Translates to: TGVIPGRRWQNA*AKLLKQKKSES Trigger: TGATTCAGACTTCTTCTGTTTCAGGAGCTTTGCCCATGCGTTCTGCCACCTTCTGCCAGGAATTACACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000551571.1 ENST00000651000.1 ENST00000657916.1 ENST00000660548.1 ENST00000661839.1 |
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| CDS CCA 72 bp | TGGGCAAAGCTCCTCTTTTGCAACCAGTGCTGCTACTaGGCTTGTACTCTTGGAAACATTTCACAGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: WAKLLFCNQCCY*ACTLGNISQAR Trigger: TCTTGCCTGTGAAATGTTTCCAAGAGTACAAGCCCAGTAGCAGCACTGGTTGCAAAAGAGGAGCTTTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669621.1 |
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| CDS CCA 72 bp | AAATCAAAGTTGAGCCACAGTGATAAAGGGGCTGAATaGCCTTTGAGCAGTCATTTTGGTTGGTGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KSKLSHSDKGAE*PLSSHFGWCRL Trigger: CAGCCTGCACCAACCAAAATGACTGCTCAAAGGCCATTCAGCCCCTTTATCACTGTGGCTCAACTTTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000551571.1 ENST00000651000.1 ENST00000657916.1 ENST00000660548.1 ENST00000661839.1 |
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| CDS CCA 72 bp | CTCCCTGGAGACATCCACATTTTCTCCCAAGCATTGTaGAATCTCAAAAGCCTTCGACTCTACGCTTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: LPGDIHIFSQAL*NLKSLRLYASS Trigger: ACTTGAAGCGTAGAGTCGAAGGCTTTTGAGATTCCACAATGCTTGGGAGAAAATGTGGATGTCTCCAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661839.1 ENST00000669621.1 |
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| CDS CAA 90 bp | TCGCTGTGCGTAGAAATATCTTCTTTGACAGAGTTGTCCTCAGTGTaGTGTTTTGAAGGGCTAATGAATATTTCTTCTTCTGAGATAGTC | + |
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Preference number: 6 (lower is better) Translates to: SLCVEISSLTELSSV*CFEGLMNISSSEIV Trigger: GACTATCTCAGAAGAAGAAATATTCATTAGCCCTTCAAAACACAACACTGAGGACAACTCTGTCAAAGAAGATATTTCTACGCACAGCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651000.1 |
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