Pregenerated sensors for LINC02819 (Homo sapiens)

Ensembl gene IDs: ENSG00000224943

Ensembl transcript IDs: ENST00000412932.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCCATACTTAGGCCTGGGAATCAACTTGAAGTTTCCCAACCTCTGTaGCAGGTGAGTCACGGGGACTCTTGTTGGTTAGAAATTGTGGAT	+
Preference number: 5 (lower is better) Translates to: SILRPGNQLEVSQPL*QVSHGDSCWLEIVD Trigger: ATCCACAATTTCTAACCAACAAGAGTCCCCGTGACTCACCTGGCACAGAGGTTGGGAAACTTCAAGTTGATTCCCAGGCCTAAGTATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412932.1
CDS CCA 90 bp	GAAGTTTCCCAACCTCTGTGCCAGGTGAGTCACGGGGACTCTTGTTaGTTAGAAATTGTGGATAGAAATTTTATCCTTGTGGATAGAAAT	+
Preference number: 5 (lower is better) Translates to: EVSQPLCQVSHGDSC*LEIVDRNFILVDRN Trigger: ATTTCTATCCACAAGGATAAAATTTCTATCCACAATTTCTAACCAACAAGAGTCCCCGTGACTCACCTGGCACAGAGGTTGGGAAACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412932.1
CDS CCA 90 bp	ATGATGGGCTTATGCAGCACAAGAAAATGTGGACAGGCTACATTTTaGAAAGTGATAAAGACTGTTCCATACTTAGGCCTGGGAATCAAC	+
Preference number: 5 (lower is better) Translates to: MMGLCSTRKCGQATF*KVIKTVPYLGLGIN Trigger: GTTGATTCCCAGGCCTAAGTATGGAACAGTCTTTATCACTTTCCAAAATGTAGCCTGTCCACATTTTCTTGTGCTGCATAAGCCCATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412932.1
CDS TCA 90 bp	GAATTTCAGCATCAGTTTCTTTTTCTCTACTGTATTATATTGGGATaGTGGGCTTATGCAGCACAAGAAAATGTGGACAGGCTACATTTT	+
Preference number: 5 (lower is better) Translates to: EFQHQFLFLYCIILG*WAYAAQENVDRLHF Trigger: AAAATGTAGCCTGTCCACATTTTCTTGTGCTGCATAAGCCCATCATCCCAATATAATACAGTAGAGAAAAAGAAACTGATGCTGAAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412932.1
CDS GCA 72 bp	AGGCCTGGGAATCAACTTGAAGTTTCCCAACCTCTGTaGCAGGTGAGTCACGGGGACTCTTGTTGGTTAGAA	+
Preference number: 6 (lower is better) Translates to: RPGNQLEVSQPL*QVSHGDSCWLE Trigger: TTCTAACCAACAAGAGTCCCCGTGACTCACCTGGCACAGAGGTTGGGAAACTTCAAGTTGATTCCCAGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412932.1
CDS CAA 90 bp	GATGATGGGCTTATGCAGCACAAGAAAATGTGGACAGGCTACATTTaGGAAAGTGATAAAGACTGTTCCATACTTAGGCCTGGGAATCAA	+
Preference number: 6 (lower is better) Translates to: DDGLMQHKKMWTGYI*ESDKDCSILRPGNQ Trigger: TTGATTCCCAGGCCTAAGTATGGAACAGTCTTTATCACTTTCCAAAATGTAGCCTGTCCACATTTTCTTGTGCTGCATAAGCCCATCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412932.1
CDS CAA 72 bp	CTTATGCAGCACAAGAAAATGTGGACAGGCTACATTTaGGAAAGTGATAAAGACTGTTCCATACTTAGGCCT	+
Preference number: 6 (lower is better) Translates to: LMQHKKMWTGYI*ESDKDCSILRP Trigger: AGGCCTAAGTATGGAACAGTCTTTATCACTTTCCAAAATGTAGCCTGTCCACATTTTCTTGTGCTGCATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412932.1

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