Pregenerated sensors for LINC02815 (Homo sapiens)

Ensembl gene IDs: ENSG00000282111

Ensembl transcript IDs: ENST00000632635.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCAGTAGAGTGTCCTTGCAGATGGTCCCAGGATACACAGCAGCCCTaGCCCCATCCTCTCCCCGGTGTGGCAGCAGTCTTTGTCTTGAAA	+
Preference number: 5 (lower is better) Translates to: AVECPCRWSQDTQQP*PHPLPGVAAVFVLK Trigger: TTTCAAGACAAAGACTGCTGCCACACCGGGGAGAGGATGGGGCCAGGGCTGCTGTGTATCCTGGGACCATCTGCAAGGACACTCTACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000632635.1
CDS CCA 90 bp	AGTTTGAAGTCTGATCAGGCACCTGCAGTAGAGTGTCCTTGCAGATaGTCCCAGGATACACAGCAGCCCTGGCCCCATCCTCTCCCCGGT	+
Preference number: 5 (lower is better) Translates to: SLKSDQAPAVECPCR*SQDTQQPWPHPLPG Trigger: ACCGGGGAGAGGATGGGGCCAGGGCTGCTGTGTATCCTGGGACCATCTGCAAGGACACTCTACTGCAGGTGCCTGATCAGACTTCAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000632635.1
CDS TCA 90 bp	AATCTCCCTCTTTCAACTTCTCAACAAAAATATCAGTTTGAAGTCTaGTCAGGCACCTGCAGTAGAGTGTCCTTGCAGATGGTCCCAGGA	+
Preference number: 5 (lower is better) Translates to: NLPLSTSQQKYQFEV*SGTCSRVSLQMVPG Trigger: TCCTGGGACCATCTGCAAGGACACTCTACTGCAGGTGCCTGATCAGACTTCAAACTGATATTTTTGTTGAGAAGTTGAAAGAGGGAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000632635.1
CDS TCA 72 bp	CCCATCCTCTCCCCGGTGTGGCAGCAGTCTTTGTCTTaGAACACAGCAGCCAGCCTTGTTCCAATTTCCTCC	+
Preference number: 6 (lower is better) Translates to: PILSPVWQQSLS*NTAASLVPISS Trigger: GGAGGAAATTGGAACAAGGCTGGCTGCTGTGTTTCAAGACAAAGACTGCTGCCACACCGGGGAGAGGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000632635.1
CDS CAA 72 bp	CCCCATCCTCTCCCCGGTGTGGCAGCAGTCTTTGTCTaGAAACACAGCAGCCAGCCTTGTTCCAATTTCCTC	+
Preference number: 6 (lower is better) Translates to: PHPLPGVAAVFV*KHSSQPCSNFL Trigger: GAGGAAATTGGAACAAGGCTGGCTGCTGTGTTTCAAGACAAAGACTGCTGCCACACCGGGGAGAGGATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000632635.1
CDS TCA 72 bp	CTTTCAACTTCTCAACAAAAATATCAGTTTGAAGTCTaGTCAGGCACCTGCAGTAGAGTGTCCTTGCAGATG	+
Preference number: 6 (lower is better) Translates to: LSTSQQKYQFEV*SGTCSRVSLQM Trigger: CATCTGCAAGGACACTCTACTGCAGGTGCCTGATCAGACTTCAAACTGATATTTTTGTTGAGAAGTTGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000632635.1

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