Pregenerated sensors for LINC02813 (Homo sapiens)
Ensembl gene IDs: ENSG00000225334Ensembl transcript IDs: ENST00000416908.1, ENST00000651912.1, ENST00000657658.1, ENST00000662308.1, ENST00000669302.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGTAGTGACTTGCCCCAGGCAGAACCCAGACTCAAGCTTCCTGACTaGACACATGCAGGCACTTGGCGGACCACTCAGCCTCTTGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: CSDLPQAEPRLKLPD*THAGTWRTTQPLGA Trigger: TGCCCCAAGAGGCTGAGTGGTCCGCCAAGTGCCTGCATGTGTGCAGTCAGGAAGCTTGAGTCTGGGTTCTGCCTGGGGCAAGTCACTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000416908.1 ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CCA 90 bp | GCAGAACCCAGACTCAAGCTTCCTGACTGCACACATGCAGGCACTTaGCGGACCACTCAGCCTCTTGGGGCACTTGAAAGTCTTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: AEPRLKLPDCTHAGT*RTTQPLGALESLLD Trigger: ATCCAGAAGACTTTCAAGTGCCCCAAGAGGCTGAGTGGTCCGCCAAGTGCCTGCATGTGTGCAGTCAGGAAGCTTGAGTCTGGGTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416908.1 ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CCA 90 bp | GGAAACCCCAGAACTGGGGCATTGAGAACACCATGGCATCTGGGATaGGTGAGTGACATGAAAGTGATCAGAGAAGGAGAGGAAGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: GNPRTGALRTPWHLG*VSDMKVIREGEEGN Trigger: GTTGCCTTCCTCTCCTTCTCTGATCACTTTCATGTCACTCACCCATCCCAGATGCCATGGTGTTCTCAATGCCCCAGTTCTGGGGTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS TCA 90 bp | GGAAGAGGTGGCACGTTAGGCTTCCATTGGATACTGAGAACATATTaGTTAGCCTCCATGCTCAGAATGCCCCTCACAAAGTGGAGACGG | + |
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Preference number: 5 (lower is better) Translates to: GRGGTLGFHWILRTY*LASMLRMPLTKWRR Trigger: CCGTCTCCACTTTGTGAGGGGCATTCTGAGCATGGAGGCTAATCAATATGTTCTCAGTATCCAATGGAAGCCTAACGTGCCACCTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS TCA 90 bp | AAACCTCCTGAGATCTGGTGCACCCTGACCCACCAGCCCCATTGTTaGAAATTCCAGATTAGAGATCTTTCATTTGGTTGGGGCGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: KPPEIWCTLTHQPHC*KFQIRDLSFGWGVG Trigger: CCCAACGCCCCAACCAAATGAAAGATCTCTAATCTGGAATTTTCAACAATGGGGCTGGTGGGTCAGGGTGCACCAGATCTCAGGAGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS GCA 90 bp | CATTTTACGAATAGCAGAAATGAGGCTCTGGGAGTTGTAGTGACTTaGCCCAGGCAGAACCCAGACTCAAGCTTCCTGACTGCACACATG | + |
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Preference number: 5 (lower is better) Translates to: HFTNSRNEALGVVVT*PRQNPDSSFLTAHM Trigger: CATGTGTGCAGTCAGGAAGCTTGAGTCTGGGTTCTGCCTGGGGCAAGTCACTACAACTCCCAGAGCCTCATTTCTGCTATTCGTAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416908.1 ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS GCA 90 bp | CAGACCTTGTGGATCAAAGAGTCTCTCTCCGTTTCATTTCCAGCTTaGTGCCAACACTTCTCCAGTAAACCATGCAGGTGGCTCTCAACT | + |
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Preference number: 5 (lower is better) Translates to: QTLWIKESLSVSFPA*CQHFSSKPCRWLST Trigger: AGTTGAGAGCCACCTGCATGGTTTACTGGAGAAGTGTTGGCAGCAAGCTGGAAATGAAACGGAGAGAGACTCTTTGATCCACAAGGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651912.1 ENST00000669302.1 |
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| CDS TCA 90 bp | CAGACCTCATTAACTACCTATTCCATAGACTGTACAGGCGCCACCTaGCTTGAAATTCCCTCTCTGCTTAGGTCTAAAAGGCCAGGGACA | + |
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Preference number: 5 (lower is better) Translates to: QTSLTTYSIDCTGAT*LEIPSLLRSKRPGT Trigger: TGTCCCTGGCCTTTTAGACCTAAGCAGAGAGGGAATTTCAAGTCAGGTGGCGCCTGTACAGTCTATGGAATAGGTAGTTAATGAGGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS GCA 90 bp | ACCTTGTGGATCAAAGAGTCTCTCTCCGTTTCATTTCCAGCTTGCTaGCAACACTTCTCCAGTAAACCATGCAGGTGGCTCTCAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: TLWIKESLSVSFPAC*QHFSSKPCRWLSTS Trigger: AGAAGTTGAGAGCCACCTGCATGGTTTACTGGAGAAGTGTTGGCAGCAAGCTGGAAATGAAACGGAGAGAGACTCTTTGATCCACAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651912.1 ENST00000669302.1 |
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| CDS TCA 90 bp | CACTTGAAAGTCTTCTGGATAAACCTCCTGAGATCTGGTGCACCCTaGCCCACCAGCCCCATTGTTGAAAATTCCAGATTAGAGATCTTT | + |
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Preference number: 5 (lower is better) Translates to: HLKVFWINLLRSGAP*PTSPIVENSRLEIF Trigger: AAAGATCTCTAATCTGGAATTTTCAACAATGGGGCTGGTGGGTCAGGGTGCACCAGATCTCAGGAGGTTTATCCAGAAGACTTTCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS TCA 90 bp | CACAGTCAGGAGGATAGGAACGATGCTGGGAACAAGTCAGTGACTTaGTATCATAGGAGGTGTCTTCTCCATTTTACGAATAGCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: HSQEDRNDAGNKSVT*YHRRCLLHFTNSRN Trigger: ATTTCTGCTATTCGTAAAATGGAGAAGACACCTCCTATGATATCAAGTCACTGACTTGTTCCCAGCATCGTTCCTATCCTCCTGACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669302.1 |
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| CDS TCA 90 bp | TCTTTCACAGTCAGGAGGATAGGAACGATGCTGGGAACAAGTCAGTaGCTTGATATCATAGGAGGTGTCTTCTCCATTTTACGAATAGCA | + |
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Preference number: 5 (lower is better) Translates to: SFTVRRIGTMLGTSQ*LDIIGGVFSILRIA Trigger: TGCTATTCGTAAAATGGAGAAGACACCTCCTATGATATCAAGTCACTGACTTGTTCCCAGCATCGTTCCTATCCTCCTGACTGTGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669302.1 |
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| CDS TCA 90 bp | ATGGTATTGAAAGTTAAATCCTCAGGAGGCTCCACCACACATTCATaGAGTCCAATGAGTGAGTTGATGGTGTTATTGTTAATGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: MVLKVKSSGGSTTHS*SPMSELMVLLLMLR Trigger: CCTCAGCATTAACAATAACACCATCAACTCACTCATTGGACTTCATGAATGTGTGGTGGAGCCTCCTGAGGATTTAACTTTCAATACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657658.1 |
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| CDS GCA 72 bp | TTGCCCCAGGCAGAACCCAGACTCAAGCTTCCTGACTaGACACATGCAGGCACTTGGCGGACCACTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LPQAEPRLKLPD*THAGTWRTTQP Trigger: AGGCTGAGTGGTCCGCCAAGTGCCTGCATGTGTGCAGTCAGGAAGCTTGAGTCTGGGTTCTGCCTGGGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416908.1 ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CAA 90 bp | GCAGGAGCCCCCAGTTTGTCTTGCCCTCAGATCCTGCCTCTGCTTTaGCACAACACTGACTGCACGGTGGGGAAGCTGACACCTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: AGAPSLSCPQILPLL*HNTDCTVGKLTPFP Trigger: GGGGAAAGGTGTCAGCTTCCCCACCGTGCAGTCAGTGTTGTGCAAAAGCAGAGGCAGGATCTGAGGGCAAGACAAACTGGGGGCTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS GCA 72 bp | AAGCAGGAGCCCCCAGTTTGTCTTGCCCTCAGATCCTaGCTCTGCTTTTGCACAACACTGACTGCACGGTGG | + |
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Preference number: 6 (lower is better) Translates to: KQEPPVCLALRS*LCFCTTLTARW Trigger: CCACCGTGCAGTCAGTGTTGTGCAAAAGCAGAGGCAGGATCTGAGGGCAAGACAAACTGGGGGCTCCTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CCA 72 bp | AGACTCAAGCTTCCTGACTGCACACATGCAGGCACTTaGCGGACCACTCAGCCTCTTGGGGCACTTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: RLKLPDCTHAGT*RTTQPLGALES Trigger: ACTTTCAAGTGCCCCAAGAGGCTGAGTGGTCCGCCAAGTGCCTGCATGTGTGCAGTCAGGAAGCTTGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416908.1 ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CAA 72 bp | GCACACATGCAGGCACTTGGCGGACCACTCAGCCTCTaGGGGCACTTGAAAGTCTTCTGGATAAACCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: AHMQALGGPLSL*GHLKVFWINLL Trigger: CAGGAGGTTTATCCAGAAGACTTTCAAGTGCCCCAAGAGGCTGAGTGGTCCGCCAAGTGCCTGCATGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416908.1 ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CAA 72 bp | CCCAGTTTGTCTTGCCCTCAGATCCTGCCTCTGCTTTaGCACAACACTGACTGCACGGTGGGGAAGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: PSLSCPQILPLL*HNTDCTVGKLT Trigger: TGTCAGCTTCCCCACCGTGCAGTCAGTGTTGTGCAAAAGCAGAGGCAGGATCTGAGGGCAAGACAAACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS GCA 72 bp | ACTGTACAGGCGCCACCTGACTTGAAATTCCCTCTCTaGTTAGGTCTAAAAGGCCAGGGACACAACCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: TVQAPPDLKFPL*LGLKGQGHNPL Trigger: CAGCGGGTTGTGTCCCTGGCCTTTTAGACCTAAGCAGAGAGGGAATTTCAAGTCAGGTGGCGCCTGTACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CAA 72 bp | CAGGCACTTGGCGGACCACTCAGCCTCTTGGGGCACTaGAAAGTCTTCTGGATAAACCTCCTGAGATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: QALGGPLSLLGH*KVFWINLLRSG Trigger: ACCAGATCTCAGGAGGTTTATCCAGAAGACTTTCAAGTGCCCCAAGAGGCTGAGTGGTCCGCCAAGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416908.1 ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CAA 90 bp | TTCCTGACTGCACACATGCAGGCACTTGGCGGACCACTCAGCCTCTaGGGGCACTTGAAAGTCTTCTGGATAAACCTCCTGAGATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: FLTAHMQALGGPLSL*GHLKVFWINLLRSG Trigger: ACCAGATCTCAGGAGGTTTATCCAGAAGACTTTCAAGTGCCCCAAGAGGCTGAGTGGTCCGCCAAGTGCCTGCATGTGTGCAGTCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000416908.1 ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS GCA 72 bp | TTTCCAGCTTGCTGCCAACACTTCTCCAGTAAACCATaGAGGTGGCTCTCAACTTCTTTTGGTGCCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FPACCQHFSSKP*RWLSTSFGAPA Trigger: GGCTGGGGCACCAAAAGAAGTTGAGAGCCACCTGCATGGTTTACTGGAGAAGTGTTGGCAGCAAGCTGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000651912.1 ENST00000669302.1 |
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| CDS CCA 72 bp | GCAGGAAACCCCAGAACTGGGGCATTGAGAACACCATaGCATCTGGGATGGGTGAGTGACATGAAAGTGATC | + |
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Preference number: 6 (lower is better) Translates to: AGNPRTGALRTP*HLGWVSDMKVI Trigger: GATCACTTTCATGTCACTCACCCATCCCAGATGCCATGGTGTTCTCAATGCCCCAGTTCTGGGGTTTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS GCA 72 bp | CTTTCATTTGGTTGGGGCGTTGGGTCTGAGTTAAAATaGACTGCCCTTGGAAGAGGTGGCACGTTAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSFGWGVGSELK*TALGRGGTLGF Trigger: GAAGCCTAACGTGCCACCTCTTCCAAGGGCAGTGCATTTTAACTCAGACCCAACGCCCCAACCAAATGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CAA 90 bp | TGGAAGAGGTGGCACGTTAGGCTTCCATTGGATACTGAGAACATATaGATTAGCCTCCATGCTCAGAATGCCCCTCACAAAGTGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: WKRWHVRLPLDTENI*ISLHAQNAPHKVET Trigger: CGTCTCCACTTTGTGAGGGGCATTCTGAGCATGGAGGCTAATCAATATGTTCTCAGTATCCAATGGAAGCCTAACGTGCCACCTCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS GCA 72 bp | ATCAAAGAGTCTCTCTCCGTTTCATTTCCAGCTTGCTaGCAACACTTCTCCAGTAAACCATGCAGGTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: IKESLSVSFPAC*QHFSSKPCRWL Trigger: GAGCCACCTGCATGGTTTACTGGAGAAGTGTTGGCAGCAAGCTGGAAATGAAACGGAGAGAGACTCTTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651912.1 ENST00000669302.1 |
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| CDS CAA 72 bp | CACTGCCCTTGGAAGAGGTGGCACGTTAGGCTTCCATaGGATACTGAGAACATATTGATTAGCCTCCATGCT | + |
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Preference number: 6 (lower is better) Translates to: HCPWKRWHVRLP*DTENILISLHA Trigger: AGCATGGAGGCTAATCAATATGTTCTCAGTATCCAATGGAAGCCTAACGTGCCACCTCTTCCAAGGGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CAA 90 bp | GTTAAAATGCACTGCCCTTGGAAGAGGTGGCACGTTAGGCTTCCATaGGATACTGAGAACATATTGATTAGCCTCCATGCTCAGAATGCC | + |
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Preference number: 6 (lower is better) Translates to: VKMHCPWKRWHVRLP*DTENILISLHAQNA Trigger: GGCATTCTGAGCATGGAGGCTAATCAATATGTTCTCAGTATCCAATGGAAGCCTAACGTGCCACCTCTTCCAAGGGCAGTGCATTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS TCA 72 bp | GGCACGTTAGGCTTCCATTGGATACTGAGAACATATTaGTTAGCCTCCATGCTCAGAATGCCCCTCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: GTLGFHWILRTY*LASMLRMPLTK Trigger: CTTTGTGAGGGGCATTCTGAGCATGGAGGCTAATCAATATGTTCTCAGTATCCAATGGAAGCCTAACGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS TCA 72 bp | GAGATCTGGTGCACCCTGACCCACCAGCCCCATTGTTaGAAATTCCAGATTAGAGATCTTTCATTTGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: EIWCTLTHQPHC*KFQIRDLSFGW Trigger: CCAACCAAATGAAAGATCTCTAATCTGGAATTTTCAACAATGGGGCTGGTGGGTCAGGGTGCACCAGATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS CAA 72 bp | TGGCACGTTAGGCTTCCATTGGATACTGAGAACATATaGATTAGCCTCCATGCTCAGAATGCCCCTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: WHVRLPLDTENI*ISLHAQNAPHK Trigger: TTTGTGAGGGGCATTCTGAGCATGGAGGCTAATCAATATGTTCTCAGTATCCAATGGAAGCCTAACGTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS TCA 72 bp | TTAACTACCTATTCCATAGACTGTACAGGCGCCACCTaGCTTGAAATTCCCTCTCTGCTTAGGTCTAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: LTTYSIDCTGAT*LEIPSLLRSKR Trigger: CCTTTTAGACCTAAGCAGAGAGGGAATTTCAAGTCAGGTGGCGCCTGTACAGTCTATGGAATAGGTAGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000651912.1 ENST00000657658.1 ENST00000662308.1 ENST00000669302.1 |
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| CDS TCA 72 bp | GTCAGGAGGATAGGAACGATGCTGGGAACAAGTCAGTaGCTTGATATCATAGGAGGTGTCTTCTCCATTTTA | + |
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Preference number: 6 (lower is better) Translates to: VRRIGTMLGTSQ*LDIIGGVFSIL Trigger: TAAAATGGAGAAGACACCTCCTATGATATCAAGTCACTGACTTGTTCCCAGCATCGTTCCTATCCTCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669302.1 |
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| CDS TCA 72 bp | GATATCCAGGTGCAGAAAGGACTGGGAACAAGTCAGTaGCTTGATATCATAGGAGGTGTCTTCTCCATTTTA | + |
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Preference number: 6 (lower is better) Translates to: DIQVQKGLGTSQ*LDIIGGVFSIL Trigger: TAAAATGGAGAAGACACCTCCTATGATATCAAGTCACTGACTTGTTCCCAGTCCTTTCTGCACCTGGATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657658.1 |
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| CDS TCA 72 bp | AAAGTTAAATCCTCAGGAGGCTCCACCACACATTCATaGAGTCCAATGAGTGAGTTGATGGTGTTATTGTTA | + |
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Preference number: 6 (lower is better) Translates to: KVKSSGGSTTHS*SPMSELMVLLL Trigger: TAACAATAACACCATCAACTCACTCATTGGACTTCATGAATGTGTGGTGGAGCCTCCTGAGGATTTAACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657658.1 |
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| CDS TCA 72 bp | CAAATTCAAAGTTTCCCTGGGAACAAGTCAGTGACTTaGTATCATAGGAGGTGTCTTCTCCATTTTACGAAT | + |
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Preference number: 6 (lower is better) Translates to: QIQSFPGNKSVT*YHRRCLLHFTN Trigger: ATTCGTAAAATGGAGAAGACACCTCCTATGATATCAAGTCACTGACTTGTTCCCAGGGAAACTTTGAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651912.1 |
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| CDS TCA 72 bp | GCTAACAAATTCAAAGTTTCCCTGGGAACAAGTCAGTaGCTTGATATCATAGGAGGTGTCTTCTCCATTTTA | + |
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Preference number: 6 (lower is better) Translates to: ANKFKVSLGTSQ*LDIIGGVFSIL Trigger: TAAAATGGAGAAGACACCTCCTATGATATCAAGTCACTGACTTGTTCCCAGGGAAACTTTGAATTTGTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651912.1 |
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