Pregenerated sensors for LINC02812 (Homo sapiens)
Ensembl gene IDs: ENSG00000230138Ensembl transcript IDs: ENST00000449958.1, ENST00000669809.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAGGTCCCTTCTTGGCTCGCCTTGCAGGCGGGTTCCTCTTCTCCATaGGGTGGTTGGTCCTTGCTCCACATGGAGTTGAGGGGCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: KVPSWLALQAGSSSP*GGWSLLHMELRGLG Trigger: CCCCAAGCCCCTCAACTCCATGTGGAGCAAGGACCAACCACCCCATGGAGAAGAGGAACCCGCCTGCAAGGCGAGCCAAGAAGGGACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 90 bp | AGCCCCCTACAGAGTCCAGTGTGGCTGGTTCCAAAGGTCCCTTCTTaGCTCGCCTTGCAGGCGGGTTCCTCTTCTCCATGGGGTGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: SPLQSPVWLVPKVPS*LALQAGSSSPWGGW Trigger: CCAACCACCCCATGGAGAAGAGGAACCCGCCTGCAAGGCGAGCCAAGAAGGGACCTTTGGAACCAGCCACACTGGACTCTGTAGGGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS GCA 90 bp | AGAGTCCAGTGTGGCTGGTTCCAAAGGTCCCTTCTTGGCTCGCCTTaGAGGCGGGTTCCTCTTCTCCATGGGGTGGTTGGTCCTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RVQCGWFQRSLLGSP*RRVPLLHGVVGPCS Trigger: GGAGCAAGGACCAACCACCCCATGGAGAAGAGGAACCCGCCTGCAAGGCGAGCCAAGAAGGGACCTTTGGAACCAGCCACACTGGACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 90 bp | AGCAGTCTGTGGGCACCCTCCCAGACTCAGGATCACCGTGCTGGCTaGAACATAAATGGGCCCTGTTGCAGGCGGGGTTGTCCTGGAACA | + |
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Preference number: 5 (lower is better) Translates to: SSLWAPSQTQDHRAG*NINGPCCRRGCPGT Trigger: TGTTCCAGGACAACCCCGCCTGCAACAGGGCCCATTTATGTTCCAGCCAGCACGGTGATCCTGAGTCTGGGAGGGTGCCCACAGACTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 90 bp | CAAAAGCAGTCTGTGGGCACCCTCCCAGACTCAGGATCACCGTGCTaGCTGGAACATAAATGGGCCCTGTTGCAGGCGGGGTTGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: QKQSVGTLPDSGSPC*LEHKWALLQAGLSW Trigger: CCAGGACAACCCCGCCTGCAACAGGGCCCATTTATGTTCCAGCCAGCACGGTGATCCTGAGTCTGGGAGGGTGCCCACAGACTGCTTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS GCA 90 bp | TCACAAAAGCAGTCTGTGGGCACCCTCCCAGACTCAGGATCACCGTaGTGGCTGGAACATAAATGGGCCCTGTTGCAGGCGGGGTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SQKQSVGTLPDSGSP*WLEHKWALLQAGLS Trigger: GGACAACCCCGCCTGCAACAGGGCCCATTTATGTTCCAGCCAGCACGGTGATCCTGAGTCTGGGAGGGTGCCCACAGACTGCTTTTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS GCA 90 bp | CAGACTCAGGATCACCGTGCTGGCTGGAACATAAATGGGCCCTGTTaGAGGCGGGGTTGTCCTGGAACAGATCTTGAGATAGACTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: QTQDHRAGWNINGPC*RRGCPGTDLEIDFD Trigger: GTCAAAGTCTATCTCAAGATCTGTTCCAGGACAACCCCGCCTGCAACAGGGCCCATTTATGTTCCAGCCAGCACGGTGATCCTGAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 90 bp | AACTGTCCCAGTCAGATGCAACCTTCTTCACGAAACCCTTTTGACTaGCACTCTCCCTCCCTTCTGTCTCCCAAAAGACTCAATGTCTAT | + |
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Preference number: 5 (lower is better) Translates to: NCPSQMQPSSRNPFD*HSPSLLSPKRLNVY Trigger: ATAGACATTGAGTCTTTTGGGAGACAGAAGGGAGGGAGAGTGCCAGTCAAAAGGGTTTCGTGAAGAAGGTTGCATCTGACTGGGACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS TCA 90 bp | AGGACACTTGCCATTGGATTGAGGGCCCACTTGCATAATACAGGATaGTCTCTTCATCTCAAAATCCCTAATGACATCTACAAAGAATTT | + |
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Preference number: 5 (lower is better) Translates to: RTLAIGLRAHLHNTG*SLHLKIPNDIYKEF Trigger: AAATTCTTTGTAGATGTCATTAGGGATTTTGAGATGAAGAGATCATCCTGTATTATGCAAGTGGGCCCTCAATCCAATGGCAAGTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 72 bp | GCCTTGCAGGCGGGTTCCTCTTCTCCATGGGGTGGTTaGTCCTTGCTCCACATGGAGTTGAGGGGCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: ALQAGSSSPWGG*SLLHMELRGLG Trigger: CCCCAAGCCCCTCAACTCCATGTGGAGCAAGGACCAACCACCCCATGGAGAAGAGGAACCCGCCTGCAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 72 bp | GCCAGCCATCCAGCCCCCTACAGAGTCCAGTGTGGCTaGTTCCAAAGGTCCCTTCTTGGCTCGCCTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASHPAPYRVQCG*FQRSLLGSPCR Trigger: CCTGCAAGGCGAGCCAAGAAGGGACCTTTGGAACCAGCCACACTGGACTCTGTAGGGGGCTGGATGGCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 72 bp | TGGGGCCAGCCATCCAGCCCCCTACAGAGTCCAGTGTaGCTGGTTCCAAAGGTCCCTTCTTGGCTCGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: WGQPSSPLQSPV*LVPKVPSWLAL Trigger: CAAGGCGAGCCAAGAAGGGACCTTTGGAACCAGCCACACTGGACTCTGTAGGGGGCTGGATGGCTGGCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CAA 72 bp | CGCCTTGCAGGCGGGTTCCTCTTCTCCATGGGGTGGTaGGTCCTTGCTCCACATGGAGTTGAGGGGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RLAGGFLFSMGW*VLAPHGVEGLG Trigger: CCCAAGCCCCTCAACTCCATGTGGAGCAAGGACCAACCACCCCATGGAGAAGAGGAACCCGCCTGCAAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CAA 90 bp | CAGCCCCCTACAGAGTCCAGTGTGGCTGGTTCCAAAGGTCCCTTCTaGGCTCGCCTTGCAGGCGGGTTCCTCTTCTCCATGGGGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: QPPTESSVAGSKGPF*ARLAGGFLFSMGWL Trigger: CAACCACCCCATGGAGAAGAGGAACCCGCCTGCAAGGCGAGCCAAGAAGGGACCTTTGGAACCAGCCACACTGGACTCTGTAGGGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 72 bp | GCTCGCCTTGCAGGCGGGTTCCTCTTCTCCATGGGGTaGTTGGTCCTTGCTCCACATGGAGTTGAGGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ARLAGGFLFSMG*LVLAPHGVEGL Trigger: AAGCCCCTCAACTCCATGTGGAGCAAGGACCAACCACCCCATGGAGAAGAGGAACCCGCCTGCAAGGCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CAA 90 bp | CAGAGTCCAGTGTGGCTGGTTCCAAAGGTCCCTTCTTGGCTCGCCTaGCAGGCGGGTTCCTCTTCTCCATGGGGTGGTTGGTCCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QSPVWLVPKVPSWLA*QAGSSSPWGGWSLL Trigger: GAGCAAGGACCAACCACCCCATGGAGAAGAGGAACCCGCCTGCAAGGCGAGCCAAGAAGGGACCTTTGGAACCAGCCACACTGGACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 72 bp | TCTTGGCTCGCCTTGCAGGCGGGTTCCTCTTCTCCATaGGGTGGTTGGTCCTTGCTCCACATGGAGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SWLALQAGSSSP*GGWSLLHMELR Trigger: CCTCAACTCCATGTGGAGCAAGGACCAACCACCCCATGGAGAAGAGGAACCCGCCTGCAAGGCGAGCCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 72 bp | CAGAGTCCAGTGTGGCTGGTTCCAAAGGTCCCTTCTTaGCTCGCCTTGCAGGCGGGTTCCTCTTCTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: QSPVWLVPKVPS*LALQAGSSSPW Trigger: CCATGGAGAAGAGGAACCCGCCTGCAAGGCGAGCCAAGAAGGGACCTTTGGAACCAGCCACACTGGACTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 72 bp | CCAGACTCAGGATCACCGTGCTGGCTGGAACATAAATaGGCCCTGTTGCAGGCGGGGTTGTCCTGGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: PDSGSPCWLEHK*ALLQAGLSWNR Trigger: TCTGTTCCAGGACAACCCCGCCTGCAACAGGGCCCATTTATGTTCCAGCCAGCACGGTGATCCTGAGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CAA 72 bp | ACAGAGTCCAGTGTGGCTGGTTCCAAAGGTCCCTTCTaGGCTCGCCTTGCAGGCGGGTTCCTCTTCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: TESSVAGSKGPF*ARLAGGFLFSM Trigger: CATGGAGAAGAGGAACCCGCCTGCAAGGCGAGCCAAGAAGGGACCTTTGGAACCAGCCACACTGGACTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS GCA 72 bp | GATCACCGTGCTGGCTGGAACATAAATGGGCCCTGTTaGAGGCGGGGTTGTCCTGGAACAGATCTTGAGATA | + |
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Preference number: 6 (lower is better) Translates to: DHRAGWNINGPC*RRGCPGTDLEI Trigger: TATCTCAAGATCTGTTCCAGGACAACCCCGCCTGCAACAGGGCCCATTTATGTTCCAGCCAGCACGGTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CAA 90 bp | GGCCTAACTGTCCCAGTCAGATGCAACCTTCTTCACGAAACCCTTTaGACTGGCACTCTCCCTCCCTTCTGTCTCCCAAAAGACTCAATG | + |
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Preference number: 6 (lower is better) Translates to: GLTVPVRCNLLHETL*TGTLPPFCLPKDSM Trigger: CATTGAGTCTTTTGGGAGACAGAAGGGAGGGAGAGTGCCAGTCAAAAGGGTTTCGTGAAGAAGGTTGCATCTGACTGGGACAGTTAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS TCA 72 bp | TCCCAGTCAGATGCAACCTTCTTCACGAAACCCTTTTaGCTGGCACTCTCCCTCCCTTCTGTCTCCCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: SQSDATFFTKPF*LALSLPSVSQK Trigger: CTTTTGGGAGACAGAAGGGAGGGAGAGTGCCAGTCAAAAGGGTTTCGTGAAGAAGGTTGCATCTGACTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS CCA 72 bp | AGTCAACACCTTTACATCGTAGCCATGATCAGTCGCTaGTCAGCCCTTCACGAAACGAGGGCGATGATAGCT | + |
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Preference number: 6 (lower is better) Translates to: SQHLYIVAMISR*SALHETRAMIA Trigger: AGCTATCATCGCCCTCGTTTCGTGAAGGGCTGACCAGCGACTGATCATGGCTACGATGTAAAGGTGTTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669809.1 |
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| CDS CAA 72 bp | GTCCCAGTCAGATGCAACCTTCTTCACGAAACCCTTTaGACTGGCACTCTCCCTCCCTTCTGTCTCCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: VPVRCNLLHETL*TGTLPPFCLPK Trigger: TTTTGGGAGACAGAAGGGAGGGAGAGTGCCAGTCAAAAGGGTTTCGTGAAGAAGGTTGCATCTGACTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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| CDS GCA 72 bp | CAAAAGACTCAATGTCTATCTCAATCACAGCTGAGTTaGCTTGGGTCTGATATGAATCTGCTTCCCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: QKTQCLSQSQLS*LGSDMNLLPPT Trigger: TGTTGGGGGAAGCAGATTCATATCAGACCCAAGGCAACTCAGCTGTGATTGAGATAGACATTGAGTCTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449958.1 |
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| CDS TCA 72 bp | GCCATTGGATTGAGGGCCCACTTGCATAATACAGGATaGTCTCTTCATCTCAAAATCCCTAATGACATCTAC | + |
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Preference number: 6 (lower is better) Translates to: AIGLRAHLHNTG*SLHLKIPNDIY Trigger: GTAGATGTCATTAGGGATTTTGAGATGAAGAGATCATCCTGTATTATGCAAGTGGGCCCTCAATCCAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449958.1 ENST00000669809.1 |
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