Pregenerated sensors for LINC02809 (Homo sapiens)
Ensembl gene IDs: ENSG00000276255Ensembl transcript IDs: ENST00000611237.1, ENST00000623471.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCAGCAGCCCTGAGCCTTACACGGGACCCAACCTGCTGCCCAAACTaGCCCATGGGGGAGACACATGTCCGGCTGGACAGGTCAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: PAALSLTRDPTCCPN*PMGETHVRLDRSGG Trigger: GCCACCTGACCTGTCCAGCCGGACATGTGTCTCCCCCATGGGTCAGTTTGGGCAGCAGGTTGGGTCCCGTGTAAGGCTCAGGGCTGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 90 bp | CTCCTCCCTTGTTCTTGTGCTGGGCGACCACACACCTCCAATGGGTaGTACAGGCCTCTCCTCCTCCCGCCTGTCAGGCCCCAGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLPCSCAGRPHTSNG*YRPLLLPPVRPQTR Trigger: CCTGGTCTGGGGCCTGACAGGCGGGAGGAGGAGAGGCCTGTAGCACCCATTGGAGGTGTGTGGTCGCCCAGCACAAGAACAAGGGAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 90 bp | CTGCCTCCTCCCTTGTTCTTGTGCTGGGCGACCACACACCTCCAATaGGTGCTACAGGCCTCTCCTCCTCCCGCCTGTCAGGCCCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: LPPPLFLCWATTHLQ*VLQASPPPACQAPD Trigger: GTCTGGGGCCTGACAGGCGGGAGGAGGAGAGGCCTGTAGCACCCATTGGAGGTGTGTGGTCGCCCAGCACAAGAACAAGGGAGGAGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 90 bp | TCGCAACTCTGCAGCCAGAAGCCCCACATTGAGGTGTCCCGGGCATaGTCCCTCCAAAGGTTCTGGGGAGGACCCTGCACAGCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SQLCSQKPHIEVSRA*SLQRFWGGPCTASS Trigger: GGAGGAGGCTGTGCAGGGTCCTCCCCAGAACCTTTGGAGGGAGCATGCCCGGGACACCTCAATGTGGGGCTTCTGGCTGCAGAGTTGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 90 bp | CAGGACCGTGAGCCACGTATTCACGGGTCCCACCAGAAGAGCACATaGGTCCAAGAACAGCAGCTGGGCAGGGGTAGCAGGCAGGCACGT | + |
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Preference number: 5 (lower is better) Translates to: QDREPRIHGSHQKST*VQEQQLGRGSRQAR Trigger: ACGTGCCTGCCTGCTACCCCTGCCCAGCTGCTGTTCTTGGACGCATGTGCTCTTCTGGTGGGACCCGTGAATACGTGGCTCACGGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS TCA 90 bp | ACCAGAGTCACCGTGGCAACAGGTGACATCAGAGCCCAGCAGCCCTaGGCCTTACACGGGACCCAACCTGCTGCCCAAACTGACCCATGG | + |
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Preference number: 5 (lower is better) Translates to: TRVTVATGDIRAQQP*ALHGTQPAAQTDPW Trigger: CCATGGGTCAGTTTGGGCAGCAGGTTGGGTCCCGTGTAAGGCTCAGGGCTGCTGGGCTCTGATGTCACCTGTTGCCACGGTGACTCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 90 bp | CCATGGGGGAGACACATGTCCGGCTGGACAGGTCAGGTGGCTGCCTaGAGAAAACTCATGACCCTGAGGCCGTGTGGGCAGACACCCTAT | + |
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Preference number: 5 (lower is better) Translates to: PWGRHMSGWTGQVAA*RKLMTLRPCGQTPY Trigger: ATAGGGTGTCTGCCCACACGGCCTCAGGGTCATGAGTTTTCTGCAGGCAGCCACCTGACCTGTCCAGCCGGACATGTGTCTCCCCCATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 90 bp | CCCCTCTCTGAGCCACCATCCCGTCCTGGCATAGTCCCACCCACCTaGTGGTTCAAGCATTGGCTGAGCGTCTGTGGTGTGTCCACTGCA | + |
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Preference number: 5 (lower is better) Translates to: PLSEPPSRPGIVPPT*WFKHWLSVCGVSTA Trigger: TGCAGTGGACACACCACAGACGCTCAGCCAATGCTTGAACCAGCAGGTGGGTGGGACTATGCCAGGACGGGATGGTGGCTCAGAGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS TCA 90 bp | CAAGGGAGGTATTTCCTCGCAACTCTGCAGCCAGAAGCCCCACATTaGGGTGTCCCGGGCATGCTCCCTCCAAAGGTTCTGGGGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: QGRYFLATLQPEAPH*GVPGMLPPKVLGRT Trigger: GGTCCTCCCCAGAACCTTTGGAGGGAGCATGCCCGGGACACCTCAATGTGGGGCTTCTGGCTGCAGAGTTGCGAGGAAATACCTCCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 90 bp | TGGTGGCTCAGGTGCCTCAGGCGCATGGCCACACACTCCAGTCTCTaGCCTGTCTTCATGGCTGGTTCCCGATCTGTGCATCTCAGATCC | + |
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Preference number: 5 (lower is better) Translates to: WWLRCLRRMATHSSL*PVFMAGSRSVHLRS Trigger: GGATCTGAGATGCACAGATCGGGAACCAGCCATGAAGACAGGCCAGAGACTGGAGTGTGTGGCCATGCGCCTGAGGCACCTGAGCCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS TCA 90 bp | AGGGCCCACCCTAATCCAGGATGGCCTGGTCTCGACGTCACTCATTaGGGATGTCTGCCAAGACCCTGGTTCTACAGGAGGTCCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: RAHPNPGWPGLDVTH*GCLPRPWFYRRSCS Trigger: GGAGCAGGACCTCCTGTAGAACCAGGGTCTTGGCAGACATCCTCAATGAGTGACGTCGAGACCAGGCCATCCTGGATTAGGGTGGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 90 bp | ACCTGGGTGGTTCACAACAGCAAGGGAGGTATTTCCTCGCAACTCTaGAGCCAGAAGCCCCACATTGAGGTGTCCCGGGCATGCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: TWVVHNSKGGISSQL*SQKPHIEVSRACSL Trigger: GAGGGAGCATGCCCGGGACACCTCAATGTGGGGCTTCTGGCTGCAGAGTTGCGAGGAAATACCTCCCTTGCTGTTGTGAACCACCCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 90 bp | CTCTCTGAGCCACCATCCCGTCCTGGCATAGTCCCACCCACCTGCTaGTTCAAGCATTGGCTGAGCGTCTGTGGTGTGTCCACTGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LSEPPSRPGIVPPTC*FKHWLSVCGVSTAK Trigger: CTTTGCAGTGGACACACCACAGACGCTCAGCCAATGCTTGAACCAGCAGGTGGGTGGGACTATGCCAGGACGGGATGGTGGCTCAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 90 bp | CAAGAACAGCAGCTGGGCAGGGGTAGCAGGCAGGCACGTGTGTCCTaGTTTGTTCAGGGCATCTTTGCATTAATCGCCACTGCAGGACCA | + |
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Preference number: 5 (lower is better) Translates to: QEQQLGRGSRQARVS*FVQGIFALIATAGP Trigger: TGGTCCTGCAGTGGCGATTAATGCAAAGATGCCCTGAACAAAGCAGGACACACGTGCCTGCCTGCTACCCCTGCCCAGCTGCTGTTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 90 bp | CAGGCGCATGGCCACACACTCCAGTCTCTGGCCTGTCTTCATGGCTaGTTCCCGATCTGTGCATCTCAGATCCCCCTCCTCTTTCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: QAHGHTLQSLACLHG*FPICASQIPLLFLL Trigger: TAAGAGAAAGAGGAGGGGGATCTGAGATGCACAGATCGGGAACCAGCCATGAAGACAGGCCAGAGACTGGAGTGTGTGGCCATGCGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 90 bp | CCATCCCGTCCTGGCATAGTCCCACCCACCTGCTGGTTCAAGCATTaGCTGAGCGTCTGTGGTGTGTCCACTGCAAAGGCAGACAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: PSRPGIVPPTCWFKH*LSVCGVSTAKADRN Trigger: ATTTCTGTCTGCCTTTGCAGTGGACACACCACAGACGCTCAGCCAATGCTTGAACCAGCAGGTGGGTGGGACTATGCCAGGACGGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 90 bp | CACACTCCAGTCTCTGGCCTGTCTTCATGGCTGGTTCCCGATCTGTaGATCTCAGATCCCCCTCCTCTTTCTCTTAGACGATCACCTGTT | + |
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Preference number: 5 (lower is better) Translates to: HTPVSGLSSWLVPDL*ISDPPPLSLRRSPV Trigger: AACAGGTGATCGTCTAAGAGAAAGAGGAGGGGGATCTGAGATGCACAGATCGGGAACCAGCCATGAAGACAGGCCAGAGACTGGAGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 90 bp | AGGTATACTGGCATCACAGGGTGGCCACAGCAAGTTACCACAACCTaGGTGGTTCACAACAGCAAGGGAGGTATTTCCTCGCAACTCTGC | + |
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Preference number: 5 (lower is better) Translates to: RYTGITGWPQQVTTT*VVHNSKGGISSQLC Trigger: GCAGAGTTGCGAGGAAATACCTCCCTTGCTGTTGTGAACCACCCAGGTTGTGGTAACTTGCTGTGGCCACCCTGTGATGCCAGTATACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS TCA 90 bp | GAACCAGGTTGCCATGGAGCCCAGGGTCCTGCTTCCCAGGAACTGTaGGAGACCATCTATGTGGACTGCTGTTTTAAACCACTAAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: EPGCHGAQGPASQEL*ETIYVDCCFKPLRF Trigger: AAACCTTAGTGGTTTAAAACAGCAGTCCACATAGATGGTCTCTCACAGTTCCTGGGAAGCAGGACCCTGGGCTCCATGGCAACCTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 90 bp | ACGTGTGTCCTGCTTTGTTCAGGGCATCTTTGCATTAATCGCCACTaGAGGACCAACATTCTCCACAACTGGCTTCCTTTAGAGACACCT | + |
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Preference number: 5 (lower is better) Translates to: TCVLLCSGHLCINRH*RTNILHNWLPLETP Trigger: AGGTGTCTCTAAAGGAAGCCAGTTGTGGAGAATGTTGGTCCTGCAGTGGCGATTAATGCAAAGATGCCCTGAACAAAGCAGGACACACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | GGGTCATGCTCCGGGCGGGTTTTAATTAAAGCTCCGTaGCCTGGGCAGGAGCGCCCCCGCCTGACTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSCSGRVLIKAP*PGQERPRLTAS Trigger: GGAGGCAGTCAGGCGGGGGCGCTCCTGCCCAGGCCACGGAGCTTTAATTAAAACCCGCCCGGAGCATGACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 72 bp | TGTTCTTGTGCTGGGCGACCACACACCTCCAATGGGTaGTACAGGCCTCTCCTCCTCCCGCCTGTCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: CSCAGRPHTSNG*YRPLLLPPVRP Trigger: GGGCCTGACAGGCGGGAGGAGGAGAGGCCTGTAGCACCCATTGGAGGTGTGTGGTCGCCCAGCACAAGAACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS TCA 72 bp | CTGAGCCTTACACGGGACCCAACCTGCTGCCCAAACTaGCCCATGGGGGAGACACATGTCCGGCTGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: LSLTRDPTCCPN*PMGETHVRLDR Trigger: CCTGTCCAGCCGGACATGTGTCTCCCCCATGGGTCAGTTTGGGCAGCAGGTTGGGTCCCGTGTAAGGCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 72 bp | TGCAGCCAGAAGCCCCACATTGAGGTGTCCCGGGCATaGTCCCTCCAAAGGTTCTGGGGAGGACCCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: CSQKPHIEVSRA*SLQRFWGGPCT Trigger: TGTGCAGGGTCCTCCCCAGAACCTTTGGAGGGAGCATGCCCGGGACACCTCAATGTGGGGCTTCTGGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 72 bp | GGGGAGACACATGTCCGGCTGGACAGGTCAGGTGGCTaGCTGCAGAAAACTCATGACCCTGAGGCCGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GETHVRLDRSGG*LQKTHDPEAVW Trigger: CCACACGGCCTCAGGGTCATGAGTTTTCTGCAGGCAGCCACCTGACCTGTCCAGCCGGACATGTGTCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | CCCTTGTTCTTGTGCTGGGCGACCACACACCTCCAATaGGTGCTACAGGCCTCTCCTCCTCCCGCCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PLFLCWATTHLQ*VLQASPPPACQ Trigger: CTGACAGGCGGGAGGAGGAGAGGCCTGTAGCACCCATTGGAGGTGTGTGGTCGCCCAGCACAAGAACAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS TCA 72 bp | ACCGTGGCAACAGGTGACATCAGAGCCCAGCAGCCCTaGGCCTTACACGGGACCCAACCTGCTGCCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: TVATGDIRAQQP*ALHGTQPAAQT Trigger: AGTTTGGGCAGCAGGTTGGGTCCCGTGTAAGGCTCAGGGCTGCTGGGCTCTGATGTCACCTGTTGCCACGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 72 bp | GAGCCACCATCCCGTCCTGGCATAGTCCCACCCACCTaGTGGTTCAAGCATTGGCTGAGCGTCTGTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: EPPSRPGIVPPT*WFKHWLSVCGV Trigger: CACACCACAGACGCTCAGCCAATGCTTGAACCAGCAGGTGGGTGGGACTATGCCAGGACGGGATGGTGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | TTACACGGGACCCAACCTGCTGCCCAAACTGACCCATaGGGGAGACACATGTCCGGCTGGACAGGTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LHGTQPAAQTDP*GRHMSGWTGQV Trigger: CACCTGACCTGTCCAGCCGGACATGTGTCTCCCCCATGGGTCAGTTTGGGCAGCAGGTTGGGTCCCGTGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CAA 90 bp | GCAAGGGAGGTATTTCCTCGCAACTCTGCAGCCAGAAGCCCCACATaGAGGTGTCCCGGGCATGCTCCCTCCAAAGGTTCTGGGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: AREVFPRNSAARSPT*RCPGHAPSKGSGED Trigger: GTCCTCCCCAGAACCTTTGGAGGGAGCATGCCCGGGACACCTCAATGTGGGGCTTCTGGCTGCAGAGTTGCGAGGAAATACCTCCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | AGGTGCCTCAGGCGCATGGCCACACACTCCAGTCTCTaGCCTGTCTTCATGGCTGGTTCCCGATCTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: RCLRRMATHSSL*PVFMAGSRSVH Trigger: ATGCACAGATCGGGAACCAGCCATGAAGACAGGCCAGAGACTGGAGTGTGTGGCCATGCGCCTGAGGCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | AACGAGCCTTGTGCTGGGGGATCCCCTTGGTTCTTCTaGGGATTCGGGATACAGTGTGCCCAGGAAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: NEPCAGGSPWFF*GFGIQCAQEGS Trigger: ACTCCCTTCCTGGGCACACTGTATCCCGAATCCCCAGAAGAACCAAGGGGATCCCCCAGCACAAGGCTCGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | CCTGGCATAGTCCCACCCACCTGCTGGTTCAAGCATTaGCTGAGCGTCTGTGGTGTGTCCACTGCAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PGIVPPTCWFKH*LSVCGVSTAKA Trigger: TGCCTTTGCAGTGGACACACCACAGACGCTCAGCCAATGCTTGAACCAGCAGGTGGGTGGGACTATGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CAA 72 bp | TCCTGGCATAGTCCCACCCACCTGCTGGTTCAAGCATaGGCTGAGCGTCTGTGGTGTGTCCACTGCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SWHSPTHLLVQA*AERLWCVHCKG Trigger: GCCTTTGCAGTGGACACACCACAGACGCTCAGCCAATGCTTGAACCAGCAGGTGGGTGGGACTATGCCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CAA 90 bp | ACCATCCCGTCCTGGCATAGTCCCACCCACCTGCTGGTTCAAGCATaGGCTGAGCGTCTGTGGTGTGTCCACTGCAAAGGCAGACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TIPSWHSPTHLLVQA*AERLWCVHCKGRQK Trigger: TTTCTGTCTGCCTTTGCAGTGGACACACCACAGACGCTCAGCCAATGCTTGAACCAGCAGGTGGGTGGGACTATGCCAGGACGGGATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS TCA 72 bp | TATTTCCTCGCAACTCTGCAGCCAGAAGCCCCACATTaGGGTGTCCCGGGCATGCTCCCTCCAAAGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: YFLATLQPEAPH*GVPGMLPPKVL Trigger: CAGAACCTTTGGAGGGAGCATGCCCGGGACACCTCAATGTGGGGCTTCTGGCTGCAGAGTTGCGAGGAAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS TCA 72 bp | CTGAGGGGTCAGCCTGTGGACGCCCGCATGCAAGAATaGGAGGGAAGACAGACATGTCTCCGGAGAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: LRGQPVDARMQE*EGRQTCLRRRS Trigger: AGATCTTCTCCGGAGACATGTCTGTCTTCCCTCTCATTCTTGCATGCGGGCGTCCACAGGCTGACCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 72 bp | GTTCACAACAGCAAGGGAGGTATTTCCTCGCAACTCTaGAGCCAGAAGCCCCACATTGAGGTGTCCCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: VHNSKGGISSQL*SQKPHIEVSRA Trigger: TGCCCGGGACACCTCAATGTGGGGCTTCTGGCTGCAGAGTTGCGAGGAAATACCTCCCTTGCTGTTGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CAA 72 bp | GTATTTCCTCGCAACTCTGCAGCCAGAAGCCCCACATaGAGGTGTCCCGGGCATGCTCCCTCCAAAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VFPRNSAARSPT*RCPGHAPSKGS Trigger: AGAACCTTTGGAGGGAGCATGCCCGGGACACCTCAATGTGGGGCTTCTGGCTGCAGAGTTGCGAGGAAATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | GGCATCACAGGGTGGCCACAGCAAGTTACCACAACCTaGGTGGTTCACAACAGCAAGGGAGGTATTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GITGWPQQVTTT*VVHNSKGGISS Trigger: CGAGGAAATACCTCCCTTGCTGTTGTGAACCACCCAGGTTGTGGTAACTTGCTGTGGCCACCCTGTGATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 72 bp | TCTCCCCAAACAAGACAGGGGCCATTCAGAATCCAGTaGCTTTGTTGTGGACTGCTGTGTCCTCTGGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SPQTRQGPFRIQ*LCCGLLCPLGP Trigger: AGGACCCAGAGGACACAGCAGTCCACAACAAAGGCACTGGATTCTGAATGGCCCCTGTCTTGTTTGGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 72 bp | GTCTCTGGCCTGTCTTCATGGCTGGTTCCCGATCTGTaGATCTCAGATCCCCCTCCTCTTTCTCTTAGACGA | + |
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Preference number: 6 (lower is better) Translates to: VSGLSSWLVPDL*ISDPPPLSLRR Trigger: TCGTCTAAGAGAAAGAGGAGGGGGATCTGAGATGCACAGATCGGGAACCAGCCATGAAGACAGGCCAGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | TCACAGGGTGGCCACAGCAAGTTACCACAACCTGGGTaGTTCACAACAGCAAGGGAGGTATTTCCTCGCAAC | + |
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Preference number: 6 (lower is better) Translates to: SQGGHSKLPQPG*FTTAREVFPRN Trigger: GTTGCGAGGAAATACCTCCCTTGCTGTTGTGAACCACCCAGGTTGTGGTAACTTGCTGTGGCCACCCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | AGACATGAGGGAAGGAGGTATACTGGCATCACAGGGTaGCCACAGCAAGTTACCACAACCTGGGTGGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: RHEGRRYTGITG*PQQVTTTWVVH Trigger: GTGAACCACCCAGGTTGTGGTAACTTGCTGTGGCCACCCTGTGATGCCAGTATACCTCCTTCCCTCATGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | ACCCACCTGCTGGTTCAAGCATTGGCTGAGCGTCTGTaGTGTGTCCACTGCAAAGGCAGACAGAAATCACAC | + |
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Preference number: 6 (lower is better) Translates to: THLLVQALAERL*CVHCKGRQKSH Trigger: GTGTGATTTCTGTCTGCCTTTGCAGTGGACACACCACAGACGCTCAGCCAATGCTTGAACCAGCAGGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CAA 72 bp | CCAAACAAGACAGGGGCCATTCAGAATCCAGTGCCTTaGTTGTGGACTGCTGTGTCCTCTGGGTCCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PNKTGAIQNPVP*LWTAVSSGSCL Trigger: CAGACAGGACCCAGAGGACACAGCAGTCCACAACAAAGGCACTGGATTCTGAATGGCCCCTGTCTTGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 72 bp | GCAGGCACGTGTGTCCTGCTTTGTTCAGGGCATCTTTaGATTAATCGCCACTGCAGGACCAACATTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: AGTCVLLCSGHL*INRHCRTNILH Trigger: GTGGAGAATGTTGGTCCTGCAGTGGCGATTAATGCAAAGATGCCCTGAACAAAGCAGGACACACGTGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS CCA 72 bp | ATTAATCGCCACTGCAGGACCAACATTCTCCACAACTaGCTTCCTTTAGAGACACCTGGCCTTGGGAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: INRHCRTNILHN*LPLETPGLGSN Trigger: ATTGCTCCCAAGGCCAGGTGTCTCTAAAGGAAGCCAGTTGTGGAGAATGTTGGTCCTGCAGTGGCGATTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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| CDS GCA 72 bp | CTGCTTTGTTCAGGGCATCTTTGCATTAATCGCCACTaGAGGACCAACATTCTCCACAACTGGCTTCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LLCSGHLCINRH*RTNILHNWLPL Trigger: TAAAGGAAGCCAGTTGTGGAGAATGTTGGTCCTGCAGTGGCGATTAATGCAAAGATGCCCTGAACAAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000611237.1 ENST00000623471.1 |
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