Pregenerated sensors for LINC02805 (Homo sapiens)
Ensembl gene IDs: ENSG00000232265Ensembl transcript IDs: ENST00000594189.2, ENST00000594699.5, ENST00000595367.6, ENST00000595668.5, ENST00000597931.6, ENST00000599864.6, ENST00000653344.1, ENST00000656778.1, ENST00000657111.1, ENST00000659506.1, ENST00000663602.1, ENST00000663701.1, ENST00000663793.1, ENST00000663831.1, ENST00000665006.1, ENST00000668803.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCCCAGCATCACTGCTGCCGTTTTCTGTTGATCAAAGCAAGTCATaGAGCCCACCCAGATTTGAGGGGAGGGAATATCTGCCCTACCTC | + |
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Preference number: 5 (lower is better) Translates to: GPASLLPFSVDQSKS*SPPRFEGREYLPYL Trigger: GAGGTAGGGCAGATATTCCCTCCCCTCAAATCTGGGTGGGCTCCATGACTTGCTTTGATCAACAGAAAACGGCAGCAGTGATGCTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS TCA 90 bp | CCTTTGTCTCAAGCTCTACTATTGGAGGAACCCAAACTGGGAGGGTaGTACTGGAACAGAAACTTGGTCAACGTGAGAATGACCCACCTT | + |
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Preference number: 5 (lower is better) Translates to: PLSQALLLEEPKLGG*YWNRNLVNVRMTHL Trigger: AAGGTGGGTCATTCTCACGTTGACCAAGTTTCTGTTCCAGTATCACCCTCCCAGTTTGGGTTCCTCCAATAGTAGAGCTTGAGACAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594699.5 |
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| CDS TCA 90 bp | ATGTTTCTTCAAGTATGGTTCCTCTCGACCTGTGGACTGGGAGGGTaGTACTGGAACAGAAACTTGGTCAACGTGAGAATGACCCACCTT | + |
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Preference number: 5 (lower is better) Translates to: MFLQVWFLSTCGLGG*YWNRNLVNVRMTHL Trigger: AAGGTGGGTCATTCTCACGTTGACCAAGTTTCTGTTCCAGTATCACCCTCCCAGTCCACAGGTCGAGAGGAACCATACTTGAAGAAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000595367.6 ENST00000656778.1 ENST00000659506.1 ENST00000665006.1 |
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| CDS TCA 90 bp | AGACTTATTAAGCACAGTAACACTCTCAGAGAGGGGAGAACGGGCTaGCTTCTGCAAAATGAGATCAGCGTCAGTTTGGTGAACTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: RLIKHSNTLREGRTG*LLQNEISVSLVNFG Trigger: CCCAAAGTTCACCAAACTGACGCTGATCTCATTTTGCAGAAGTCAGCCCGTTCTCCCCTCTCTGAGAGTGTTACTGTGCTTAATAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657111.1 ENST00000663793.1 ENST00000665006.1 |
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| CDS TCA 90 bp | GAACAGAAACTTGGTCAACGTGAGAATGACCCACCTTTTGTCCAATaGCTATCTTCTCCTTTGTTACCGGCTGGTGTTGTGAAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: EQKLGQRENDPPFVQ*LSSPLLPAGVVKSQ Trigger: CTGGGACTTCACAACACCAGCCGGTAACAAAGGAGAAGATAGTCATTGGACAAAAGGTGGGTCATTCTCACGTTGACCAAGTTTCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665006.1 |
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| CDS TCA 90 bp | GTTTCTTCAAGTATGGTTCCTCTCGACCTGTGGACTTTTGTCCAATaGCTATCTTCTCCTTTGTTACCGGCTGGTGTTGTGAAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: VSSSMVPLDLWTFVQ*LSSPLLPAGVVKSQ Trigger: CTGGGACTTCACAACACCAGCCGGTAACAAAGGAGAAGATAGTCATTGGACAAAAGTCCACAGGTCGAGAGGAACCATACTTGAAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668803.1 |
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| CDS GCA 90 bp | TTTGTTCCATGTGGAGTCAGCAGAGATAACTTGATGATACCCAGCTaGCAAATGAGCTGGTCTGGAGATTCCAGATGGCTTCATTTACAA | + |
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Preference number: 5 (lower is better) Translates to: FVPCGVSRDNLMIPS*QMSWSGDSRWLHLQ Trigger: TTGTAAATGAAGCCATCTGGAATCTCCAGACCAGCTCATTTGGCAGCTGGGTATCATCAAGTTATCTCTGCTGACTCCACATGGAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CCA 90 bp | CAGGCTCAAGATGCAGGATTTTATCATCCAAATCAGGCCCACATATaGATGAAACCCTTCAGGTATGTTTCTTCAAGTATGGTTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: QAQDAGFYHPNQAHI*MKPFRYVSSSMVPL Trigger: GAGAGGAACCATACTTGAAGAAACATACCTGAAGGGTTTCATCCATATGTGGGCCTGATTTGGATGATAAAATCCTGCATCTTGAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000659506.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS GCA 90 bp | TGGAAGGGTATCAGAGAATTTGTAGCAACCTTTAATCTGTCACAGTaGACATTTTGGCCATTGATTATGTTCCTTGCCTATGGGAAAATA | + |
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Preference number: 5 (lower is better) Translates to: WKGIREFVATFNLSQ*TFWPLIMFLAYGKI Trigger: TATTTTCCCATAGGCAAGGAACATAATCAATGGCCAAAATGTGCACTGTGACAGATTAAAGGTTGCTACAAATTCTCTGATACCCTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000659506.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CCA 90 bp | ATCAGAGAATTTGTAGCAACCTTTAATCTGTCACAGTGCACATTTTaGCCATTGATTATGTTCCTTGCCTATGGGAAAATACATTCACCC | + |
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Preference number: 5 (lower is better) Translates to: IREFVATFNLSQCTF*PLIMFLAYGKIHSP Trigger: GGGTGAATGTATTTTCCCATAGGCAAGGAACATAATCAATGGCCAAAATGTGCACTGTGACAGATTAAAGGTTGCTACAAATTCTCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000659506.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CCA 72 bp | CCTGCATGGCCGGGAGTCGTACCGGAGTCGCCGGCGTaGGAGACAAAAACCTCTACCGCTGAACTACCAATC | + |
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Preference number: 6 (lower is better) Translates to: PAWPGVVPESPA*ETKTSTAELPI Trigger: GATTGGTAGTTCAGCGGTAGAGGTTTTTGTCTCCCACGCCGGCGACTCCGGTACGACTCCCGGCCATGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657111.1 |
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| CDS GCA 72 bp | TCTGCACATCTCTCAGGAAACCCAGATGAAATTGAGTaGCTGCTGCCCACATCAGCAACCCAGGTAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SAHLSGNPDEIE*LLPTSATQVRH Trigger: GTGCCTTACCTGGGTTGCTGATGTGGGCAGCAGGCACTCAATTTCATCTGGGTTTCCTGAGAGATGTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594699.5 |
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| CDS CAA 72 bp | CAACAACTGGCCCAGCATCACTGCTGCCGTTTTCTGTaGATCAAAGCAAGTCATGGAGCCCACCCAGATTTG | + |
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Preference number: 6 (lower is better) Translates to: QQLAQHHCCRFL*IKASHGAHPDL Trigger: CAAATCTGGGTGGGCTCCATGACTTGCTTTGATCAACAGAAAACGGCAGCAGTGATGCTGGGCCAGTTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS TCA 72 bp | CAAGTATGGTTCCTCTCGACCTGTGGACTGGGAGGGTaGTACTGGAACAGAAACTTGGTCAACGTGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: QVWFLSTCGLGG*YWNRNLVNVRM Trigger: CATTCTCACGTTGACCAAGTTTCTGTTCCAGTATCACCCTCCCAGTCCACAGGTCGAGAGGAACCATACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000595367.6 ENST00000656778.1 ENST00000659506.1 ENST00000665006.1 |
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| CDS TCA 72 bp | AAGCACAGTAACACTCTCAGAGAGGGGAGAACGGGCTaGCTTCTGCAAAATGAGATCAGCGTCAGTTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KHSNTLREGRTG*LLQNEISVSLV Trigger: CACCAAACTGACGCTGATCTCATTTTGCAGAAGTCAGCCCGTTCTCCCCTCTCTGAGAGTGTTACTGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657111.1 ENST00000663793.1 ENST00000665006.1 |
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| CDS CAA 90 bp | CAGCTGGGTGATTCCTTTGTTCCATGTGGAGTCAGCAGAGATAACTaGATGATACCCAGCTGCCAAATGAGCTGGTCTGGAGATTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QLGDSFVPCGVSRDN*MIPSCQMSWSGDSR Trigger: TCTGGAATCTCCAGACCAGCTCATTTGGCAGCTGGGTATCATCAAGTTATCTCTGCTGACTCCACATGGAACAAAGGAATCACCCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS TCA 72 bp | GGGTTTGCCGGGAGACTTTGTTACCGGCTGGTGTTGTaGAGTCCCAGGTTCTTGGTGTCTTTAACAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: GFAGRLCYRLVL*SPRFLVSLTKN Trigger: ATTCTTTGTTAAAGACACCAAGAACCTGGGACTTCACAACACCAGCCGGTAACAAAGTCTCCCGGCAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663793.1 |
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| CDS CCA 72 bp | GACTCAGTGTTCCAAGAGAACTTAAGTGGAAGTTGTTaGTTCTTAAGGCCTGGATCCAACAACTGGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: DSVFQENLSGSC*FLRPGSNNWPS Trigger: GCTGGGCCAGTTGTTGGATCCAGGCCTTAAGAACCAACAACTTCCACTTAAGTTCTCTTGGAACACTGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CCA 72 bp | TGTTTCTTCAAGTATGGTTCCTCTCGACCTGTGGACTaGGAGGGTGATACTGGAACAGAAACTTGGTCAACG | + |
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Preference number: 6 (lower is better) Translates to: CFFKYGSSRPVD*EGDTGTETWST Trigger: CGTTGACCAAGTTTCTGTTCCAGTATCACCCTCCCAGTCCACAGGTCGAGAGGAACCATACTTGAAGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000595367.6 ENST00000656778.1 ENST00000659506.1 ENST00000665006.1 |
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| CDS CAA 72 bp | CAGGGACTCAGTGTTCCAAGAGAACTTAAGTGGAAGTaGTTGGTTCTTAAGGCCTGGATCCAACAACTGGCC | + |
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Preference number: 6 (lower is better) Translates to: QGLSVPRELKWK*LVLKAWIQQLA Trigger: GGCCAGTTGTTGGATCCAGGCCTTAAGAACCAACAACTTCCACTTAAGTTCTCTTGGAACACTGAGTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS TCA 72 bp | CAAGCTCTACTATTGGAGGAACCCAAACTGGGAGGGTaGTACTGGAACAGAAACTTGGTCAACGTGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: QALLLEEPKLGG*YWNRNLVNVRM Trigger: CATTCTCACGTTGACCAAGTTTCTGTTCCAGTATCACCCTCCCAGTTTGGGTTCCTCCAATAGTAGAGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594699.5 |
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| CDS TCA 72 bp | GATGGCTTCATTTACAAATTTAGTGATGGGGATGGCTaGAAAGCTGGTCTTGGCTGGGACTGGCAACTAGAG | + |
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Preference number: 6 (lower is better) Translates to: DGFIYKFSDGDG*KAGLGWDWQLE Trigger: CTCTAGTTGCCAGTCCCAGCCAAGACCAGCTTTTCAGCCATCCCCATCACTAAATTTGTAAATGAAGCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS TCA 72 bp | CTTGGTCAACGTGAGAATGACCCACCTTTTGTCCAATaGCTATCTTCTCCTTTGTTACCGGCTGGTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: LGQRENDPPFVQ*LSSPLLPAGVV Trigger: CACAACACCAGCCGGTAACAAAGGAGAAGATAGTCATTGGACAAAAGGTGGGTCATTCTCACGTTGACCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665006.1 |
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| CDS TCA 72 bp | AGTATGGTTCCTCTCGACCTGTGGACTTTTGTCCAATaGCTATCTTCTCCTTTGTTACCGGCTGGTGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SMVPLDLWTFVQ*LSSPLLPAGVV Trigger: CACAACACCAGCCGGTAACAAAGGAGAAGATAGTCATTGGACAAAAGTCCACAGGTCGAGAGGAACCATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668803.1 |
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| CDS CCA 72 bp | CTTTGTCTCAAGCTCTACTATTGGAGGAACCCAAACTaGGAGGGTGATACTGGAACAGAAACTTGGTCAACG | + |
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Preference number: 6 (lower is better) Translates to: LCLKLYYWRNPN*EGDTGTETWST Trigger: CGTTGACCAAGTTTCTGTTCCAGTATCACCCTCCCAGTTTGGGTTCCTCCAATAGTAGAGCTTGAGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594699.5 |
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| CDS CAA 72 bp | GATTCCTTTGTTCCATGTGGAGTCAGCAGAGATAACTaGATGATACCCAGCTGCCAAATGAGCTGGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: DSFVPCGVSRDN*MIPSCQMSWSG Trigger: TCCAGACCAGCTCATTTGGCAGCTGGGTATCATCAAGTTATCTCTGCTGACTCCACATGGAACAAAGGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CCA 72 bp | TACTGGTATCCAAACCTTTGTCTCAAGCTCTACTATTaGAGGAACCCAAACTGGGAGGGTGATACTGGAACA | + |
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Preference number: 6 (lower is better) Translates to: YWYPNLCLKLYY*RNPNWEGDTGT Trigger: TGTTCCAGTATCACCCTCCCAGTTTGGGTTCCTCCAATAGTAGAGCTTGAGACAAAGGTTTGGATACCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594699.5 |
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| CDS CCA 72 bp | GGTAGTCAGGGACTCAGTGTTCCAAGAGAACTTAAGTaGAAGTTGTTGGTTCTTAAGGCCTGGATCCAACAA | + |
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Preference number: 6 (lower is better) Translates to: GSQGLSVPRELK*KLLVLKAWIQQ Trigger: TTGTTGGATCCAGGCCTTAAGAACCAACAACTTCCACTTAAGTTCTCTTGGAACACTGAGTCCCTGACTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS GCA 72 bp | ATCAGAACACAGGCAGCATCAAGATCAGGCTCAAGATaGAGGATTTTATCATCCAAATCAGGCCCACATATG | + |
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Preference number: 6 (lower is better) Translates to: IRTQAASRSGSR*RILSSKSGPHM Trigger: CATATGTGGGCCTGATTTGGATGATAAAATCCTGCATCTTGAGCCTGATCTTGATGCTGCCTGTGTTCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000659506.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CAA 72 bp | AACAGAAACTTGGTCAACGTGAGAATGACCCACCTTTaGTCCAATGACTATCTTCTCCTTTGTTACCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: NRNLVNVRMTHL*SNDYLLLCYRL Trigger: CAGCCGGTAACAAAGGAGAAGATAGTCATTGGACAAAAGGTGGGTCATTCTCACGTTGACCAAGTTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665006.1 |
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| CDS CAA 72 bp | TTTCTTCAAGTATGGTTCCTCTCGACCTGTGGACTTTaGTCCAATGACTATCTTCTCCTTTGTTACCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FLQVWFLSTCGL*SNDYLLLCYRL Trigger: CAGCCGGTAACAAAGGAGAAGATAGTCATTGGACAAAAGTCCACAGGTCGAGAGGAACCATACTTGAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668803.1 |
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| CDS CAA 90 bp | GCTGGTGTTGTGAAGTCCCAGGTTCTTGGTGTCTTTAACAAAGAATaGGAAGTGACACACACACATGTAGCAAAGCAGCAAGAGACTTAT | + |
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Preference number: 6 (lower is better) Translates to: AGVVKSQVLGVFNKE*EVTHTHVAKQQETY Trigger: ATAAGTCTCTTGCTGCTTTGCTACATGTGTGTGTGTCACTTCCAATTCTTTGTTAAAGACACCAAGAACCTGGGACTTCACAACACCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657111.1 ENST00000663793.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS TCA 72 bp | GTGTCTTACAGAGATCTTTGTTACCGGCTGGTGTTGTaGAGTCCCAGGTTCTTGGTGTCTTTAACAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: VSYRDLCYRLVL*SPRFLVSLTKN Trigger: ATTCTTTGTTAAAGACACCAAGAACCTGGGACTTCACAACACCAGCCGGTAACAAAGATCTCTGTAAGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657111.1 |
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| CDS CAA 72 bp | GTGAAGTCCCAGGTTCTTGGTGTCTTTAACAAAGAATaGGAAGTGACACACACACATGTAGCAAAGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VKSQVLGVFNKE*EVTHTHVAKQQ Trigger: TTGCTGCTTTGCTACATGTGTGTGTGTCACTTCCAATTCTTTGTTAAAGACACCAAGAACCTGGGACTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657111.1 ENST00000663793.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS TCA 72 bp | AATGACTATCTTCTCCTTTGTTACCGGCTGGTGTTGTaGAGTCCCAGGTTCTTGGTGTCTTTAACAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: NDYLLLCYRLVL*SPRFLVSLTKN Trigger: ATTCTTTGTTAAAGACACCAAGAACCTGGGACTTCACAACACCAGCCGGTAACAAAGGAGAAGATAGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665006.1 ENST00000668803.1 |
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| CDS CCA 72 bp | AGAGATAACTTGATGATACCCAGCTGCCAAATGAGCTaGTCTGGAGATTCCAGATGGCTTCATTTACAAATT | + |
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Preference number: 6 (lower is better) Translates to: RDNLMIPSCQMS*SGDSRWLHLQI Trigger: AATTTGTAAATGAAGCCATCTGGAATCTCCAGACCAGCTCATTTGGCAGCTGGGTATCATCAAGTTATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CAA 72 bp | GATCACCTTCTAAATACACTACTGGTATCCAAACCTTaGTCTCAAGCTCTACTATTGGAGGAACCCAAACTG | + |
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Preference number: 6 (lower is better) Translates to: DHLLNTLLVSKP*SQALLLEEPKL Trigger: CAGTTTGGGTTCCTCCAATAGTAGAGCTTGAGACAAAGGTTTGGATACCAGTAGTGTATTTAGAAGGTGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594699.5 |
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| CDS TCA 72 bp | CAGGATTTTATCATCCAAATCAGGCCCACATATGGATaGAACCCTTCAGGTATGTTTCTTCAAGTATGGTTC | + |
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Preference number: 6 (lower is better) Translates to: QDFIIQIRPTYG*NPSGMFLQVWF Trigger: GAACCATACTTGAAGAAACATACCTGAAGGGTTTCATCCATATGTGGGCCTGATTTGGATGATAAAATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000659506.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS TCA 72 bp | CAACCTTTAATCTGTCACAGTGCACATTTTGGCCATTaGTTATGTTCCTTGCCTATGGGAAAATACATTCAC | + |
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Preference number: 6 (lower is better) Translates to: QPLICHSAHFGH*LCSLPMGKYIH Trigger: GTGAATGTATTTTCCCATAGGCAAGGAACATAATCAATGGCCAAAATGTGCACTGTGACAGATTAAAGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000659506.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CAA 90 bp | GAATTTGTAGCAACCTTTAATCTGTCACAGTGCACATTTTGGCCATaGATTATGTTCCTTGCCTATGGGAAAATACATTCACCCTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: EFVATFNLSQCTFWP*IMFLAYGKIHSPFL Trigger: TAGAAAGGGTGAATGTATTTTCCCATAGGCAAGGAACATAATCAATGGCCAAAATGTGCACTGTGACAGATTAAAGGTTGCTACAAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000659506.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CCA 72 bp | TTTGTAGCAACCTTTAATCTGTCACAGTGCACATTTTaGCCATTGATTATGTTCCTTGCCTATGGGAAAATA | + |
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Preference number: 6 (lower is better) Translates to: FVATFNLSQCTF*PLIMFLAYGKI Trigger: TATTTTCCCATAGGCAAGGAACATAATCAATGGCCAAAATGTGCACTGTGACAGATTAAAGGTTGCTACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENST00000595367.6 ENST00000595668.5 ENST00000597931.6 ENST00000599864.6 ENST00000653344.1 ENST00000656778.1 ENST00000659506.1 ENST00000663602.1 ENST00000663701.1 ENST00000663831.1 ENST00000665006.1 ENST00000668803.1 |
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| CDS CAA 72 bp | GACTTTAGGGCATATGCAGCGCATACTTTATCTCATTaGATTCCCACACAACTTTGTCCATTAAGTATTTTT | + |
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Preference number: 6 (lower is better) Translates to: DFRAYAAHTLSH*IPTQLCPLSIF Trigger: AAAAATACTTAATGGACAAAGTTGTGTGGGAATCAAATGAGATAAAGTATGCGCTGCATATGCCCTAAAGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000594189.2 ENST00000663831.1 |
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