Pregenerated sensors for LINC02804 (Homo sapiens)
Ensembl gene IDs: ENSG00000274372Ensembl transcript IDs: ENST00000614663.4, ENST00000617309.1, ENST00000659447.1, ENST00000665117.1, ENST00000668298.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GATCAATGTGCTGGTAGAGTTGGTTTCTGGGGAGGCCTCTCTTCCTaGCTTGCAGAAGGCCACTTTCTTGCTTTGTGCTCCCATAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: DQCAGRVGFWGGLSS*LAEGHFLALCSHSL Trigger: AAGGCTATGGGAGCACAAAGCAAGAAAGTGGCCTTCTGCAAGCCAGGAAGAGAGGCCTCCCCAGAAACCAACTCTACCAGCACATTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000614663.4 ENST00000617309.1 ENST00000659447.1 ENST00000665117.1 ENST00000668298.1 |
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| CDS TCA 90 bp | AACACTTTAGGAGGCAAAGGCGGGTGCATCACGAGGTCAGGAGATTaGTACCATCCTGGCCAACATGATGAAACCCCCGTCTCTACTATA | + |
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Preference number: 5 (lower is better) Translates to: NTLGGKGGCITRSGD*YHPGQHDETPVSTI Trigger: TATAGTAGAGACGGGGGTTTCATCATGTTGGCCAGGATGGTATCAATCTCCTGACCTCGTGATGCACCCGCCTTTGCCTCCTAAAGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659447.1 |
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| CDS CCA 72 bp | GCTGGTAGAGTTGGTTTCTGGGGAGGCCTCTCTTCCTaGCTTGCAGAAGGCCACTTTCTTGCTTTGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AGRVGFWGGLSS*LAEGHFLALCS Trigger: GGAGCACAAAGCAAGAAAGTGGCCTTCTGCAAGCCAGGAAGAGAGGCCTCCCCAGAAACCAACTCTACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000614663.4 ENST00000617309.1 ENST00000659447.1 ENST00000665117.1 ENST00000668298.1 |
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| CDS TCA 72 bp | AAGGAGTCTTCCGGGCAGAAGGAATCCAATACCAGATaGAAATCCAGATCCATGAAAGACACTCGGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: KESSGQKESNTR*KSRSMKDTREM Trigger: CATTTCCCGAGTGTCTTTCATGGATCTGGATTTTCATCTGGTATTGGATTCCTTCTGCCCGGAAGACTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665117.1 |
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| CDS CCA 72 bp | TATGTGCACCTACATAATATCCTTAATTTTGCCTCTTaGCTCACAAGCCTAGAATACTTCCTATCTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: YVHLHNILNFAS*LTSLEYFLSPW Trigger: CCAGGGAGATAGGAAGTATTCTAGGCTTGTGAGCCAAGAGGCAAAATTAAGGATATTATGTAGGTGCACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668298.1 |
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