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Pregenerated sensors for LINC02803 (Homo sapiens)

Ensembl gene IDs: ENSG00000227740

Ensembl transcript IDs: ENST00000426575.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CAGAGGGGTGGCAGATTTCCTCTGGCAGGTCTTTCCAGATCTTTCTaGCTTTGTCTCAGGGTTTCCAGCGCAAATGATGTCAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: QRGGRFPLAGLSRSF*LCLRVSSANDVRVL
Trigger: AAGGACCCTGACATCATTTGCGCTGGAAACCCTGAGACAAAGTCAGAAAGATCTGGAAAGACCTGCCAGAGGAAATCTGCCACCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS GCA 90 bp TCTCTTGCCTGCAATCTCAATTCACTTTCCCTTCTTCAGTCTTGTTaGCTGCATATAAGAAGACTAGTAGAGGTGATGCTGGTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: SLACNLNSLSLLQSC*LHIRRLVEVMLVQP
Trigger: GGGCTGAACCAGCATCACCTCTACTAGTCTTCTTATATGCAGGCAACAAGACTGAAGAAGGGAAAGTGAATTGAGATTGCAGGCAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS TCA 90 bp TTCCACTTGTGGCTCCATAGATATGATCAATATCGGGGTTTTTCTTaGCAAACAACCTTATCTCTTGCCTGCAATCTCAATTCACTTTCC +
Preference number: 5 (lower is better)
Translates to: FHLWLHRYDQYRGFS*QTTLSLACNLNSLS
Trigger: GGAAAGTGAATTGAGATTGCAGGCAAGAGATAAGGTTGTTTGTCAAGAAAAACCCCGATATTGATCATATCTATGGAGCCACAAGTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS GCA 72 bp CCCCTGCCACCTAAGTCCTACTCTCCGGTGAGAGAATaGACTGGACATGTGGTAGGAAAGGGGATATTTCAG +
Preference number: 6 (lower is better)
Translates to: PLPPKSYSPVRE*TGHVVGKGIFQ
Trigger: CTGAAATATCCCCTTTCCTACCACATGTCCAGTGCATTCTCTCACCGGAGAGTAGGACTTAGGTGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS CCA 72 bp CTGGAAGATAAGAACACCTCCCAGAGATTAACACACTaGGAAGACCACTTTTGGCTTCCACTTGTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: LEDKNTSQRLTH*EDHFWLPLVAP
Trigger: TGGAGCCACAAGTGGAAGCCAAAAGTGGTCTTCCCAGTGTGTTAATCTCTGGGAGGTGTTCTTATCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS CAA 90 bp TGTCCTGTGGTGCTAGCTTCACATAGGAAGCCTGGATTCAGCAGTTaGCCTTTTGCACTGATAGCCTTATGGGTCATCGACAGCACTTTA +
Preference number: 6 (lower is better)
Translates to: CPVVLASHRKPGFSS*PFALIALWVIDSTL
Trigger: TAAAGTGCTGTCGATGACCCATAAGGCTATCAGTGCAAAAGGCAAACTGCTGAATCCAGGCTTCCTATGTGAAGCTAGCACCACAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS CAA 72 bp CACCTCCCAGAGATTAACACACTGGGAAGACCACTTTaGGCTTCCACTTGTGGCTCCATAGATATGATCAAT +
Preference number: 6 (lower is better)
Translates to: HLPEINTLGRPL*ASTCGSIDMIN
Trigger: ATTGATCATATCTATGGAGCCACAAGTGGAAGCCAAAAGTGGTCTTCCCAGTGTGTTAATCTCTGGGAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS CAA 90 bp CTTATCTCTTGCCTGCAATCTCAATTCACTTTCCCTTCTTCAGTCTaGTTGCCTGCATATAAGAAGACTAGTAGAGGTGATGCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: LISCLQSQFTFPSSV*LPAYKKTSRGDAGS
Trigger: TGAACCAGCATCACCTCTACTAGTCTTCTTATATGCAGGCAACAAGACTGAAGAAGGGAAAGTGAATTGAGATTGCAGGCAAGAGATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS CAA 90 bp GATATGATCAATATCGGGGTTTTTCTTGACAAACAACCTTATCTCTaGCCTGCAATCTCAATTCACTTTCCCTTCTTCAGTCTTGTTGCC +
Preference number: 6 (lower is better)
Translates to: DMINIGVFLDKQPYL*PAISIHFPFFSLVA
Trigger: GGCAACAAGACTGAAGAAGGGAAAGTGAATTGAGATTGCAGGCAAGAGATAAGGTTGTTTGTCAAGAAAAACCCCGATATTGATCATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS GCA 72 bp ATATCGGGGTTTTTCTTGACAAACAACCTTATCTCTTaGCTGCAATCTCAATTCACTTTCCCTTCTTCAGTC +
Preference number: 6 (lower is better)
Translates to: ISGFFLTNNLIS*LQSQFTFPSSV
Trigger: GACTGAAGAAGGGAAAGTGAATTGAGATTGCAGGCAAGAGATAAGGTTGTTTGTCAAGAAAAACCCCGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS TCA 72 bp TGGCTCCATAGATATGATCAATATCGGGGTTTTTCTTaGCAAACAACCTTATCTCTTGCCTGCAATCTCAAT +
Preference number: 6 (lower is better)
Translates to: WLHRYDQYRGFS*QTTLSLACNLN
Trigger: ATTGAGATTGCAGGCAAGAGATAAGGTTGTTTGTCAAGAAAAACCCCGATATTGATCATATCTATGGAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426575.2
CDS CAA 72 bp AATATCGGGGTTTTTCTTGACAAACAACCTTATCTCTaGCCTGCAATCTCAATTCACTTTCCCTTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: NIGVFLDKQPYL*PAISIHFPFFS
Trigger: ACTGAAGAAGGGAAAGTGAATTGAGATTGCAGGCAAGAGATAAGGTTGTTTGTCAAGAAAAACCCCGATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426575.2