Pregenerated sensors for LINC02802 (Homo sapiens)

Ensembl gene IDs: ENSG00000232527

Ensembl transcript IDs: ENST00000452399.6

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATCTTGACACGAGGTCATTGCAGAAGGAGAGAGGGTGTAGAGTCATaGCAGTTCTTAGGTGCTCCTGACAAGGAGATCTGCAGCACTCTG	+
Preference number: 5 (lower is better) Translates to: ILTRGHCRRREGVES*QFLGAPDKEICSTL Trigger: CAGAGTGCTGCAGATCTCCTTGTCAGGAGCACCTAAGAACTGGCATGACTCTACACCCTCTCTCCTTCTGCAATGACCTCGTGTCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452399.6
CDS GCA 72 bp	CGAGGTCATTGCAGAAGGAGAGAGGGTGTAGAGTCATaGCAGTTCTTAGGTGCTCCTGACAAGGAGATCTGC	+
Preference number: 6 (lower is better) Translates to: RGHCRRREGVES*QFLGAPDKEIC Trigger: GCAGATCTCCTTGTCAGGAGCACCTAAGAACTGGCATGACTCTACACCCTCTCTCCTTCTGCAATGACCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452399.6
CDS TCA 72 bp	AGAGGGTGTAGAGTCATGCCAGTTCTTAGGTGCTCCTaGCAAGGAGATCTGCAGCACTCTGCTCACATTCCT	+
Preference number: 6 (lower is better) Translates to: RGCRVMPVLRCS*QGDLQHSAHIP Trigger: AGGAATGTGAGCAGAGTGCTGCAGATCTCCTTGTCAGGAGCACCTAAGAACTGGCATGACTCTACACCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452399.6
CDS GCA 72 bp	CACATTCCTGTTTTCCAGAACTCAGCCAGTACCCAGTaGAACTGCCAAAGAGTCTTGCAGGACGGAGTCTTG	+
Preference number: 6 (lower is better) Translates to: HIPVFQNSASTQ*NCQRVLQDGVL Trigger: CAAGACTCCGTCCTGCAAGACTCTTTGGCAGTTGCACTGGGTACTGGCTGAGTTCTGGAAAACAGGAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452399.6

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu