Pregenerated sensors for LINC02796 (Homo sapiens)

Ensembl gene IDs: ENSG00000227016

Ensembl transcript IDs: ENST00000418078.3

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGGTTTCTATGGTCAGGGATTGCAGCTGGGATGACGGTTCCTACATaGTTTGACCTTCCTGTCCAAATGAAGGAAGAAGCAAGCAGGCTT	+
Preference number: 5 (lower is better) Translates to: GFLWSGIAAGMTVPT*FDLPVQMKEEASRL Trigger: AAGCCTGCTTGCTTCTTCCTTCATTTGGACAGGAAGGTCAAACCATGTAGGAACCGTCATCCCAGCTGCAATCCCTGACCATAGAAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS TCA 90 bp	TCTATGGTCAGGGATTGCAGCTGGGATGACGGTTCCTACATGGTTTaGCCTTCCTGTCCAAATGAAGGAAGAAGCAAGCAGGCTTTCTCA	+
Preference number: 5 (lower is better) Translates to: SMVRDCSWDDGSYMV*PSCPNEGRSKQAFS Trigger: TGAGAAAGCCTGCTTGCTTCTTCCTTCATTTGGACAGGAAGGTCAAACCATGTAGGAACCGTCATCCCAGCTGCAATCCCTGACCATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS CCA 90 bp	TCTCAAGCAAGTCCAAAGATGACTCGAGAAACAAGGAAAGAAAACTaGCTTGGGGTTTCTATGGTCAGGGATTGCAGCTGGGATGACGGT	+
Preference number: 5 (lower is better) Translates to: SQASPKMTRETRKEN*LGVSMVRDCSWDDG Trigger: ACCGTCATCCCAGCTGCAATCCCTGACCATAGAAACCCCAAGCCAGTTTTCTTTCCTTGTTTCTCGAGTCATCTTTGGACTTGCTTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS GCA 90 bp	GCGGTCCAAGTGGAGTTAGTTGATATTACTCTTCTGATCAAAATTTaGTGTGGTTTCCCATATCACTTGCCTTCATTTTTAAAGAAGAGT	+
Preference number: 5 (lower is better) Translates to: AVQVELVDITLLIKI*CGFPYHLPSFLKKS Trigger: ACTCTTCTTTAAAAATGAAGGCAAGTGATATGGGAAACCACAGCAAATTTTGATCAGAAGAGTAATATCAACTAACTCCACTTGGACCGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS TCA 90 bp	CTGCCATTTAGTTGTCATTTAATTAGTCCAGATGTCCAGTATTCTTaGACCTTCATTTCTTCATCTATAGACCAGGGAATATGTACTCAG	+
Preference number: 5 (lower is better) Translates to: LPFSCHLISPDVQYS*TFISSSIDQGICTQ Trigger: CTGAGTACATATTCCCTGGTCTATAGATGAAGAAATGAAGGTTCAAGAATACTGGACATCTGGACTAATTAAATGACAACTAAATGGCAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS TCA 72 bp	GCTTGGGGTTTCTATGGTCAGGGATTGCAGCTGGGATaGCGGTTCCTACATGGTTTGACCTTCCTGTCCAAA	+
Preference number: 6 (lower is better) Translates to: AWGFYGQGLQLG*RFLHGLTFLSK Trigger: TTTGGACAGGAAGGTCAAACCATGTAGGAACCGTCATCCCAGCTGCAATCCCTGACCATAGAAACCCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS TCA 72 bp	AGGGATTGCAGCTGGGATGACGGTTCCTACATGGTTTaGCCTTCCTGTCCAAATGAAGGAAGAAGCAAGCAG	+
Preference number: 6 (lower is better) Translates to: RDCSWDDGSYMV*PSCPNEGRSKQ Trigger: CTGCTTGCTTCTTCCTTCATTTGGACAGGAAGGTCAAACCATGTAGGAACCGTCATCCCAGCTGCAATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS CCA 72 bp	TGGTCAGGGATTGCAGCTGGGATGACGGTTCCTACATaGTTTGACCTTCCTGTCCAAATGAAGGAAGAAGCA	+
Preference number: 6 (lower is better) Translates to: WSGIAAGMTVPT*FDLPVQMKEEA Trigger: TGCTTCTTCCTTCATTTGGACAGGAAGGTCAAACCATGTAGGAACCGTCATCCCAGCTGCAATCCCTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS GCA 72 bp	GATAGTGTTGCCATCATTTTTCACTGGCTTCCAGGTTaGTGTAGTATTCTCCTTCCTCGTTTCCATGCGGTC	+
Preference number: 6 (lower is better) Translates to: DSVAIIFHWLPG*CSILLPRFHAV Trigger: GACCGCATGGAAACGAGGAAGGAGAATACTACAGCAACCTGGAAGCCAGTGAAAAATGATGGCAACACTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS TCA 72 bp	TGGGAGAACAAGGCAAATCTCAAGCAAGTCCAAAGATaGCTCGAGAAACAAGGAAAGAAAACTGGCTTGGGG	+
Preference number: 6 (lower is better) Translates to: WENKANLKQVQR*LEKQGKKTGLG Trigger: CCCCAAGCCAGTTTTCTTTCCTTGTTTCTCGAGTCATCTTTGGACTTGCTTGAGATTTGCCTTGTTCTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS CCA 72 bp	CCTTGCTTCCACTTGCACAAGGCAAAACCCATGGAGTaGTTCATGATTTTTCATGCTCTCTCTGCAAATACA	+
Preference number: 6 (lower is better) Translates to: PCFHLHKAKPME*FMIFHALSANT Trigger: TGTATTTGCAGAGAGAGCATGAAAAATCATGAACCACTCCATGGGTTTTGCCTTGTGCAAGTGGAAGCAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS TCA 72 bp	CCTTCCTCGTTTCCATGCGGTCCAAGTGGAGTTAGTTaGTATTACTCTTCTGATCAAAATTTGCTGTGGTTT	+
Preference number: 6 (lower is better) Translates to: PSSFPCGPSGVS*YYSSDQNLLWF Trigger: AAACCACAGCAAATTTTGATCAGAAGAGTAATATCAACTAACTCCACTTGGACCGCATGGAAACGAGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS CCA 72 bp	AATGGAAAGGTTTATTGCTCCCATAATGAGCTTTTCTaGGAGAACAAGGCAAATCTCAAGCAAGTCCAAAGA	+
Preference number: 6 (lower is better) Translates to: NGKVYCSHNELF*ENKANLKQVQR Trigger: TCTTTGGACTTGCTTGAGATTTGCCTTGTTCTCCCAGAAAAGCTCATTATGGGAGCAATAAACCTTTCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS TCA 72 bp	AGTTGTCATTTAATTAGTCCAGATGTCCAGTATTCTTaGACCTTCATTTCTTCATCTATAGACCAGGGAATA	+
Preference number: 6 (lower is better) Translates to: SCHLISPDVQYS*TFISSSIDQGI Trigger: TATTCCCTGGTCTATAGATGAAGAAATGAAGGTTCAAGAATACTGGACATCTGGACTAATTAAATGACAACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418078.3
CDS GCA 72 bp	GTGGAGTTAGTTGATATTACTCTTCTGATCAAAATTTaGTGTGGTTTCCCATATCACTTGCCTTCATTTTTA	+
Preference number: 6 (lower is better) Translates to: VELVDITLLIKI*CGFPYHLPSFL Trigger: TAAAAATGAAGGCAAGTGATATGGGAAACCACAGCAAATTTTGATCAGAAGAGTAATATCAACTAACTCCAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000418078.3